Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
01:31:24 (26767): wrapper (7.7.26015): starting
01:31:24 (26767): wrapper: running run_atlas (--nthreads 8)
[2025-07-26 01:31:24] Arguments: --nthreads 8
[2025-07-26 01:31:24] Threads: 8
[2025-07-26 01:31:24] Checking for CVMFS
[2025-07-26 01:31:25] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-26 01:31:25] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-26 01:31:25] Running cvmfs_config stat atlas.cern.ch
[2025-07-26 01:31:25] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-26 01:31:25] 2.11.2.0 2692 97423 112936 148765 0 57 14562269 20275201 1 130560 0 25471090 99.954 7801509 8991 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-07-26 01:31:25] CVMFS is ok
[2025-07-26 01:31:25] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-26 01:31:25] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-26 01:31:25] Further information can be found at the LHC@home message board.
[2025-07-26 01:31:25] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-26 01:31:25] Checking for apptainer binary...
[2025-07-26 01:31:25] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-26 01:31:25] Running /usr/bin/apptainer --version
[2025-07-26 01:31:25] apptainer version 1.3.2-1.el7
[2025-07-26 01:31:25] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-26 01:31:27] c-204-1.aglt2.org
[2025-07-26 01:31:27] apptainer works
[2025-07-26 01:31:27] Set ATHENA_PROC_NUMBER=8
[2025-07-26 01:31:27] Set ATHENA_CORE_NUMBER=8
[2025-07-26 01:31:27] Starting ATLAS job with PandaID=6745093793
[2025-07-26 01:31:27] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-26 03:54:54]  *** The last 200 lines of the pilot log: ***
[2025-07-26 03:54:54] 2025-07-26 07:54:16,391 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-26 03:54:54] 2025-07-26 07:54:17,577 | INFO     | monitor loop #639: job 0:6745093793 is in state 'finished'
[2025-07-26 03:54:54] 2025-07-26 07:54:17,577 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-26 03:54:54] 2025-07-26 07:54:20,079 | INFO     | monitor loop #640: job 0:6745093793 is in state 'finished'
[2025-07-26 03:54:54] 2025-07-26 07:54:20,080 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-26 03:54:54] 2025-07-26 07:54:22,419 | INFO     | CPU arch script returned: x86-64-v2
[2025-07-26 03:54:54] 2025-07-26 07:54:22,422 | INFO     | found 8 cores (4 cores per socket, 2 sockets) , CPU MHz: 1679.25
[2025-07-26 03:54:54] 2025-07-26 07:54:22,424 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6745093793/memory_monitor_summary.json (trf name=prmon)
[2025-07-26 03:54:54] 2025-07-26 07:54:22,425 | INFO     | extracted standard info from prmon json
[2025-07-26 03:54:54] 2025-07-26 07:54:22,426 | INFO     | extracted standard memory fields from prmon json
[2025-07-26 03:54:54] 2025-07-26 07:54:22,426 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-26 03:54:54] 2025-07-26 07:54:22,426 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-26 03:54:54] 2025-07-26 07:54:22,426 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-26 03:54:54] 2025-07-26 07:54:22,429 | INFO     | fitting pss+swap vs Time
[2025-07-26 03:54:54] 2025-07-26 07:54:22,429 | INFO     | sum of square deviations: 850825255.0
[2025-07-26 03:54:54] 2025-07-26 07:54:22,430 | INFO     | sum of deviations: -3798763928.500002
[2025-07-26 03:54:54] 2025-07-26 07:54:22,430 | INFO     | mean x: 1753512175.5
[2025-07-26 03:54:54] 2025-07-26 07:54:22,430 | INFO     | mean y: 2535719.592857143
[2025-07-26 03:54:54] 2025-07-26 07:54:22,430 | INFO     | -- intersect: 7831615499.876254
[2025-07-26 03:54:54] 2025-07-26 07:54:22,431 | INFO     | intersect: 7831615499.876254
[2025-07-26 03:54:54] 2025-07-26 07:54:22,431 | INFO     | chi2: 1.6401728573718297
[2025-07-26 03:54:54] 2025-07-26 07:54:22,431 | INFO     | sum of square deviations: 762879420.0
[2025-07-26 03:54:54] 2025-07-26 07:54:22,432 | INFO     | sum of deviations: -3421176520.999997
[2025-07-26 03:54:54] 2025-07-26 07:54:22,432 | INFO     | mean x: 1753512023.0
[2025-07-26 03:54:54] 2025-07-26 07:54:22,432 | INFO     | mean y: 2536374.6148148146
[2025-07-26 03:54:54] 2025-07-26 07:54:22,432 | INFO     | -- intersect: 7866261630.670099
[2025-07-26 03:54:54] 2025-07-26 07:54:22,432 | INFO     | intersect: 7866261630.670099
[2025-07-26 03:54:54] 2025-07-26 07:54:22,433 | INFO     | chi2: 1.6401075770775173
[2025-07-26 03:54:54] 2025-07-26 07:54:22,433 | INFO     | current chi2=1.6401075770775173 (change=0.003980086246336994 %)
[2025-07-26 03:54:54] 2025-07-26 07:54:22,433 | INFO     | right removable region: 134
[2025-07-26 03:54:54] 2025-07-26 07:54:22,433 | INFO     | sum of square deviations: 762879420.0
[2025-07-26 03:54:54] 2025-07-26 07:54:22,434 | INFO     | sum of deviations: -25151568677.999996
[2025-07-26 03:54:54] 2025-07-26 07:54:22,434 | INFO     | mean x: 1753512328.0
[2025-07-26 03:54:54] 2025-07-26 07:54:22,434 | INFO     | mean y: 2572138.548148148
[2025-07-26 03:54:54] 2025-07-26 07:54:22,434 | INFO     | -- intersect: 57814573077.584694
[2025-07-26 03:54:54] 2025-07-26 07:54:22,434 | INFO     | intersect: 57814573077.584694
[2025-07-26 03:54:54] 2025-07-26 07:54:22,434 | INFO     | chi2: 0.1375533566805468
[2025-07-26 03:54:54] 2025-07-26 07:54:22,435 | INFO     | current chi2=0.1375533566805468 (change=91.61348414819163 %)
[2025-07-26 03:54:54] 2025-07-26 07:54:22,435 | INFO     | sum of square deviations: 681212772.5
[2025-07-26 03:54:54] 2025-07-26 07:54:22,435 | INFO     | sum of deviations: -22072636560.999996
[2025-07-26 03:54:54] 2025-07-26 07:54:22,436 | INFO     | mean x: 1753512480.5
[2025-07-26 03:54:54] 2025-07-26 07:54:22,436 | INFO     | mean y: 2566368.323076923
[2025-07-26 03:54:54] 2025-07-26 07:54:22,436 | INFO     | -- intersect: 56819827068.25232
[2025-07-26 03:54:54] 2025-07-26 07:54:22,436 | INFO     | intersect: 56819827068.25232
[2025-07-26 03:54:54] 2025-07-26 07:54:22,436 | INFO     | chi2: 0.13680241411362515
[2025-07-26 03:54:54] 2025-07-26 07:54:22,436 | INFO     | current chi2=0.13680241411362515 (change=0.54592820200356 %)
[2025-07-26 03:54:54] 2025-07-26 07:54:22,436 | INFO     | left removable region: 20
[2025-07-26 03:54:54] 2025-07-26 07:54:22,437 | INFO     | sum of square deviations: 459366752.5
[2025-07-26 03:54:54] 2025-07-26 07:54:22,437 | INFO     | sum of deviations: -13106638059.0
[2025-07-26 03:54:54] 2025-07-26 07:54:22,437 | INFO     | mean x: 1753512602.5
[2025-07-26 03:54:54] 2025-07-26 07:54:22,438 | INFO     | mean y: 2550502.298245614
[2025-07-26 03:54:54] 2025-07-26 07:54:22,438 | INFO     | -- intersect: 50033718164.704636
[2025-07-26 03:54:54] 2025-07-26 07:54:22,438 | INFO     | intersect: 50033718164.704636
[2025-07-26 03:54:54] 2025-07-26 07:54:22,438 | INFO     | chi2: 0.11652163866867808
[2025-07-26 03:54:54] 2025-07-26 07:54:22,438 | INFO     | -- intersect: 50033718164.704636
[2025-07-26 03:54:54] 2025-07-26 07:54:22,438 | INFO     | current memory leak: -28.53 B/s (using 114 data points, chi2=0.12)
[2025-07-26 03:54:54] 2025-07-26 07:54:22,439 | INFO     | could have reported an average CPU frequency of 1997 MHz (8 samples)
[2025-07-26 03:54:54] 2025-07-26 07:54:22,439 | INFO     | ..............................
[2025-07-26 03:54:54] 2025-07-26 07:54:22,439 | INFO     | . Timing measurements:
[2025-07-26 03:54:54] 2025-07-26 07:54:22,439 | INFO     | . get job = 0 s
[2025-07-26 03:54:54] 2025-07-26 07:54:22,439 | INFO     | . initial setup = 2 s
[2025-07-26 03:54:54] 2025-07-26 07:54:22,439 | INFO     | . payload setup = 11 s
[2025-07-26 03:54:54] 2025-07-26 07:54:22,439 | INFO     | . stage-in = 0 s
[2025-07-26 03:54:54] 2025-07-26 07:54:22,440 | INFO     | . payload execution = 8520 s
[2025-07-26 03:54:54] 2025-07-26 07:54:22,440 | INFO     | . stage-out = 1 s
[2025-07-26 03:54:54] 2025-07-26 07:54:22,440 | INFO     | . log creation = 0 s
[2025-07-26 03:54:54] 2025-07-26 07:54:22,440 | INFO     | ..............................
[2025-07-26 03:54:54] 2025-07-26 07:54:22,551 | INFO     | 
[2025-07-26 03:54:54] 2025-07-26 07:54:22,552 | INFO     | job summary report
[2025-07-26 03:54:54] 2025-07-26 07:54:22,552 | INFO     | --------------------------------------------------
[2025-07-26 03:54:54] 2025-07-26 07:54:22,552 | INFO     | PanDA job id: 6745093793
[2025-07-26 03:54:54] 2025-07-26 07:54:22,552 | INFO     | task id: 45743349
[2025-07-26 03:54:54] 2025-07-26 07:54:22,553 | INFO     | errors: (none)
[2025-07-26 03:54:54] 2025-07-26 07:54:22,553 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-26 03:54:54] 2025-07-26 07:54:22,553 | INFO     | pilot state: finished 
[2025-07-26 03:54:54] 2025-07-26 07:54:22,553 | INFO     | transexitcode: 0
[2025-07-26 03:54:54] 2025-07-26 07:54:22,553 | INFO     | exeerrorcode: 0
[2025-07-26 03:54:54] 2025-07-26 07:54:22,553 | INFO     | exeerrordiag: 
[2025-07-26 03:54:54] 2025-07-26 07:54:22,554 | INFO     | exitcode: 0
[2025-07-26 03:54:54] 2025-07-26 07:54:22,554 | INFO     | exitmsg: OK
[2025-07-26 03:54:54] 2025-07-26 07:54:22,554 | INFO     | cpuconsumptiontime: 63332 s
[2025-07-26 03:54:54] 2025-07-26 07:54:22,554 | INFO     | nevents: 400
[2025-07-26 03:54:54] 2025-07-26 07:54:22,554 | INFO     | neventsw: 0
[2025-07-26 03:54:54] 2025-07-26 07:54:22,554 | INFO     | pid: 4563
[2025-07-26 03:54:54] 2025-07-26 07:54:22,555 | INFO     | pgrp: 4563
[2025-07-26 03:54:54] 2025-07-26 07:54:22,555 | INFO     | corecount: 8
[2025-07-26 03:54:54] 2025-07-26 07:54:22,555 | INFO     | event service: False
[2025-07-26 03:54:54] 2025-07-26 07:54:22,555 | INFO     | sizes: {0: 2396647, 1: 2397503, 7: 2397765, 12: 2397793, 8536: 2425702, 8537: 2434884, 8544: 2435022}
[2025-07-26 03:54:54] 2025-07-26 07:54:22,555 | INFO     | --------------------------------------------------
[2025-07-26 03:54:54] 2025-07-26 07:54:22,555 | INFO     | 
[2025-07-26 03:54:54] 2025-07-26 07:54:22,555 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-07-26 03:54:54] 2025-07-26 07:54:22,583 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-26 03:54:54] 2025-07-26 07:54:22,584 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-26 03:54:54] 2025-07-26 07:54:22,584 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-26 03:54:54] 2025-07-26 07:54:22,584 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-26 03:54:54] 2025-07-26 07:54:22,584 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-26 03:54:54] 2025-07-26 07:54:22,585 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-26 03:54:54] 2025-07-26 07:54:22,585 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-26 03:54:54] 2025-07-26 07:54:22,585 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-26 03:54:54] 2025-07-26 07:54:22,585 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-26 03:54:54] 2025-07-26 07:54:22,585 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-26 03:54:54] 2025-07-26 07:54:22,585 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-26 03:54:54] 2025-07-26 07:54:22,586 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-26 03:54:54] 2025-07-26 07:54:22,586 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-26 03:54:54] 2025-07-26 07:54:22,586 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-26 03:54:54] 2025-07-26 07:54:22,586 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-26 03:54:54] 2025-07-26 07:54:22,586 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-26 03:54:54] 2025-07-26 07:54:22,586 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-26 03:54:54] 2025-07-26 07:54:22,586 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-26 03:54:54] 2025-07-26 07:54:22,587 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-26 03:54:54] 2025-07-26 07:54:22,587 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-26 03:54:54] 2025-07-26 07:54:22,587 | INFO     | job 6745093793 has completed (purged errors)
[2025-07-26 03:54:54] 2025-07-26 07:54:22,587 | INFO     | overall cleanup function is called
[2025-07-26 03:54:54] 2025-07-26 07:54:23,595 | INFO     | --- collectZombieJob: --- 10, [4563]
[2025-07-26 03:54:54] 2025-07-26 07:54:23,595 | INFO     | zombie collector waiting for pid 4563
[2025-07-26 03:54:54] 2025-07-26 07:54:23,595 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-26 03:54:54] 2025-07-26 07:54:23,596 | INFO     | collected zombie processes
[2025-07-26 03:54:54] 2025-07-26 07:54:23,596 | INFO     | will attempt to kill all subprocesses of pid=4563
[2025-07-26 03:54:54] 2025-07-26 07:54:23,671 | INFO     | process IDs to be killed: [4563] (in reverse order)
[2025-07-26 03:54:54] 2025-07-26 07:54:23,726 | WARNING  | found no corresponding commands to process id(s)
[2025-07-26 03:54:54] 2025-07-26 07:54:23,726 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-26 03:54:54] 2025-07-26 07:54:23,730 | INFO     | did not find any defunct processes belonging to 4563
[2025-07-26 03:54:54] 2025-07-26 07:54:23,734 | INFO     | did not find any defunct processes belonging to 4563
[2025-07-26 03:54:54] 2025-07-26 07:54:23,734 | INFO     | ready for new job
[2025-07-26 03:54:54] 2025-07-26 07:54:23,734 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-26 03:54:54] 2025-07-26 07:54:23,736 | INFO     | ***************************************
[2025-07-26 03:54:54] 2025-07-26 07:54:23,736 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-26 03:54:54] 2025-07-26 07:54:23,736 | INFO     | ***************************************
[2025-07-26 03:54:54] 2025-07-26 07:54:23,736 | INFO     | 
[2025-07-26 03:54:54] 2025-07-26 07:54:23,737 | INFO     | architecture information:
[2025-07-26 03:54:54] 2025-07-26 07:54:23,738 | INFO     | executing command: cat /etc/os-release
[2025-07-26 03:54:54] 2025-07-26 07:54:23,755 | INFO     | cat /etc/os-release:
[2025-07-26 03:54:54] NAME="CentOS Linux"
[2025-07-26 03:54:54] VERSION="7 (Core)"
[2025-07-26 03:54:54] ID="centos"
[2025-07-26 03:54:54] ID_LIKE="rhel fedora"
[2025-07-26 03:54:54] VERSION_ID="7"
[2025-07-26 03:54:54] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-26 03:54:54] ANSI_COLOR="0;31"
[2025-07-26 03:54:54] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-26 03:54:54] HOME_URL="https://www.centos.org/"
[2025-07-26 03:54:54] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-26 03:54:54] 
[2025-07-26 03:54:54] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-26 03:54:54] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-26 03:54:54] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-26 03:54:54] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-26 03:54:54] 
[2025-07-26 03:54:54] 2025-07-26 07:54:23,755 | INFO     | ***************************************
[2025-07-26 03:54:54] 2025-07-26 07:54:24,259 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-07-26 03:54:54] 2025-07-26 07:54:24,279 | INFO     | sufficient remaining disk space (18750636032 B)
[2025-07-26 03:54:54] 2025-07-26 07:54:24,279 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-26 03:54:54] 2025-07-26 07:54:24,280 | INFO     | current server update state: UPDATING_FINAL
[2025-07-26 03:54:54] 2025-07-26 07:54:24,280 | INFO     | update_server=False
[2025-07-26 03:54:54] 2025-07-26 07:54:24,280 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-26 03:54:54] 2025-07-26 07:54:24,280 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-26 03:54:54] 2025-07-26 07:54:24,281 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-26 03:54:54] 2025-07-26 07:54:24,281 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-26 03:54:54] 2025-07-26 07:54:24,282 | INFO     | aborting loop
[2025-07-26 03:54:54] 2025-07-26 07:54:24,602 | INFO     | all data control threads have been joined
[2025-07-26 03:54:54] 2025-07-26 07:54:24,820 | INFO     | all payload control threads have been joined
[2025-07-26 03:54:54] 2025-07-26 07:54:25,283 | INFO     | [job] queue monitor thread has finished
[2025-07-26 03:54:54] 2025-07-26 07:54:25,286 | INFO     | [job] retrieve thread has finished
[2025-07-26 03:54:54] 2025-07-26 07:54:25,286 | INFO     | [job] job monitor thread has finished
[2025-07-26 03:54:54] 2025-07-26 07:54:25,319 | INFO     | [job] validate thread has finished
[2025-07-26 03:54:54] 2025-07-26 07:54:25,375 | INFO     | [data] copytool_in thread has finished
[2025-07-26 03:54:54] 2025-07-26 07:54:25,394 | INFO     | [payload] validate_post thread has finished
[2025-07-26 03:54:54] 2025-07-26 07:54:25,421 | INFO     | [job] create_data_payload thread has finished
[2025-07-26 03:54:54] 2025-07-26 07:54:25,524 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-26 03:54:54] 2025-07-26 07:54:25,604 | INFO     | [data] control thread has finished
[2025-07-26 03:54:54] 2025-07-26 07:54:25,731 | INFO     | [payload] validate_pre thread has finished
[2025-07-26 03:54:54] 2025-07-26 07:54:25,826 | INFO     | [payload] control thread has finished
[2025-07-26 03:54:54] 2025-07-26 07:54:25,882 | INFO     | [payload] failed_post thread has finished
[2025-07-26 03:54:54] 2025-07-26 07:54:25,920 | INFO     | all job control threads have been joined
[2025-07-26 03:54:54] 2025-07-26 07:54:26,214 | INFO     | [payload] execute_payloads thread has finished
[2025-07-26 03:54:54] 2025-07-26 07:54:26,286 | INFO     | [data] copytool_out thread has finished
[2025-07-26 03:54:54] 2025-07-26 07:54:26,722 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-26 03:54:54] 2025-07-26 07:54:26,925 | INFO     | [job] control thread has finished
[2025-07-26 03:54:54] 2025-07-26 07:54:30,728 | INFO     | [data] queue_monitor thread has finished
[2025-07-26 03:54:54] 2025-07-26 07:54:32,119 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139946397648704)>', '<ExcThread(monitor, started 139946098665216)>']
[2025-07-26 03:54:54] 2025-07-26 07:54:37,138 | INFO     | all workflow threads have been joined
[2025-07-26 03:54:54] 2025-07-26 07:54:37,138 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-26 03:54:54] 2025-07-26 07:54:37,138 | INFO     | traces error code: 0
[2025-07-26 03:54:54] 2025-07-26 07:54:37,139 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-26 03:54:54] 2025-07-26 07:54:54,465 | INFO     | PID=30370 has CPU usage=4.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-07-26 03:54:54] 2025-07-26 07:54:54,466 | INFO     | found 0 job(s) in 20 queues
[2025-07-26 03:54:54] 2025-07-26 07:54:54,466 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-26 03:54:54] 2025-07-26 07:54:54,466 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-26 03:54:54] 2025-07-26 07:54:54,467 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-26 03:54:54] 2025-07-26 07:54:54,467 | INFO     | [monitor] control thread has ended
[2025-07-26 03:54:54] 2025-07-26 07:54:54,577 [wrapper] ==== pilot stdout END ====
[2025-07-26 03:54:54] 2025-07-26 07:54:54,582 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-26 03:54:54] 2025-07-26 07:54:54,587 [wrapper] pilotpid: 30370
[2025-07-26 03:54:54] 2025-07-26 07:54:54,591 [wrapper] Pilot exit status: 0
[2025-07-26 03:54:54] 2025-07-26 07:54:54,610 [wrapper] pandaids: 6745093793
[2025-07-26 03:54:54] 2025-07-26 07:54:54,653 [wrapper] cleanup supervisor_pilot 13555 30371
[2025-07-26 03:54:54] 2025-07-26 07:54:54,658 [wrapper] Test setup, not cleaning
[2025-07-26 03:54:54] 2025-07-26 07:54:54,662 [wrapper] apfmon messages muted
[2025-07-26 03:54:54] 2025-07-26 07:54:54,667 [wrapper] ==== wrapper stdout END ====
[2025-07-26 03:54:54] 2025-07-26 07:54:54,672 [wrapper] ==== wrapper stderr END ====
[2025-07-26 03:54:54]  *** Error codes and diagnostics ***
[2025-07-26 03:54:54]     "exeErrorCode": 0,
[2025-07-26 03:54:54]     "exeErrorDiag": "",
[2025-07-26 03:54:54]     "pilotErrorCode": 0,
[2025-07-26 03:54:54]     "pilotErrorDiag": "",
[2025-07-26 03:54:54]  *** Listing of results directory ***
[2025-07-26 03:54:54] total 344820
[2025-07-26 03:54:54] -rw-r--r-- 1 boincer boincer    530466 Jul 25 22:23 pilot3.tar.gz
[2025-07-26 03:54:54] -rwx------ 1 boincer boincer     36292 Jul 25 22:42 runpilot2-wrapper.sh
[2025-07-26 03:54:54] -rw-r--r-- 1 boincer boincer      5112 Jul 25 22:42 queuedata.json
[2025-07-26 03:54:54] -rw-r--r-- 1 boincer boincer       100 Jul 26 01:31 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-26 03:54:54] -rwxr-xr-x 1 boincer boincer      7986 Jul 26 01:31 run_atlas
[2025-07-26 03:54:54] -rw-r--r-- 1 boincer boincer       105 Jul 26 01:31 job.xml
[2025-07-26 03:54:54] -rw-r--r-- 2 boincer boincer 145919054 Jul 26 01:31 EVNT.45743347._001721.pool.root.1
[2025-07-26 03:54:54] -rw-r--r-- 2 boincer boincer     15095 Jul 26 01:31 start_atlas.sh
[2025-07-26 03:54:54] drwxrwx--x 2 boincer boincer      4096 Jul 26 01:31 shared
[2025-07-26 03:54:54] -rw-r--r-- 2 boincer boincer    542894 Jul 26 01:31 input.tar.gz
[2025-07-26 03:54:54] -rw-r--r-- 1 boincer boincer         0 Jul 26 01:31 boinc_lockfile
[2025-07-26 03:54:54] -rw-r--r-- 1 boincer boincer      2563 Jul 26 01:31 pandaJob.out
[2025-07-26 03:54:54] -rw------- 1 boincer boincer    980001 Jul 26 01:31 agis_schedconf.cvmfs.json
[2025-07-26 03:54:54] -rw------- 1 boincer boincer   1593052 Jul 26 01:31 agis_ddmendpoints.agis.ALL.json
[2025-07-26 03:54:54] drwx------ 4 boincer boincer      4096 Jul 26 01:31 pilot3
[2025-07-26 03:54:54] -rw-r--r-- 1 boincer boincer      5824 Jul 26 03:46 init_data.xml
[2025-07-26 03:54:54] -rw------- 1 boincer boincer 201063350 Jul 26 03:53 HITS.45743349._030854.pool.root.1
[2025-07-26 03:54:54] -rw-r--r-- 1 boincer boincer       529 Jul 26 03:53 boinc_task_state.xml
[2025-07-26 03:54:54] -rw------- 1 boincer boincer      1049 Jul 26 03:54 memory_monitor_summary.json
[2025-07-26 03:54:54] -rw------- 1 boincer boincer    336898 Jul 26 03:54 log.45743349._030854.job.log.tgz.1
[2025-07-26 03:54:54] -rw------- 1 boincer boincer      7847 Jul 26 03:54 heartbeat.json
[2025-07-26 03:54:54] -rw-r--r-- 1 boincer boincer        27 Jul 26 03:54 wrapper_checkpoint.txt
[2025-07-26 03:54:54] -rw-r--r-- 1 boincer boincer      8192 Jul 26 03:54 boinc_mmap_file
[2025-07-26 03:54:54] -rw------- 1 boincer boincer        95 Jul 26 03:54 pilot_heartbeat.json
[2025-07-26 03:54:54] -rw------- 1 boincer boincer       745 Jul 26 03:54 pilotlog.txt
[2025-07-26 03:54:54] -rw------- 1 boincer boincer    782841 Jul 26 03:54 log.45743349._030854.job.log.1
[2025-07-26 03:54:54] -rw------- 1 boincer boincer       357 Jul 26 03:54 output.list
[2025-07-26 03:54:54] -rw-r--r-- 1 boincer boincer       620 Jul 26 03:54 runtime_log
[2025-07-26 03:54:54] -rw------- 1 boincer boincer   1136640 Jul 26 03:54 result.tar.gz
[2025-07-26 03:54:54] -rw-r--r-- 1 boincer boincer      8655 Jul 26 03:54 runtime_log.err
[2025-07-26 03:54:54] -rw------- 1 boincer boincer       659 Jul 26 03:54 e6OKDmf2jz7n9Rq4apOajLDm4fhM0noT9bVof3QYDmRzzKDmeSXIQo.diag
[2025-07-26 03:54:54] -rw-r--r-- 1 boincer boincer     21232 Jul 26 03:54 stderr.txt
[2025-07-26 03:54:54] HITS file was successfully produced:
[2025-07-26 03:54:54] -rw------- 1 boincer boincer 201063350 Jul 26 03:53 shared/HITS.pool.root.1
[2025-07-26 03:54:54]  *** Contents of shared directory: ***
[2025-07-26 03:54:54] total 340516
[2025-07-26 03:54:54] -rw-r--r-- 2 boincer boincer 145919054 Jul 26 01:31 ATLAS.root_0
[2025-07-26 03:54:54] -rw-r--r-- 2 boincer boincer     15095 Jul 26 01:31 start_atlas.sh
[2025-07-26 03:54:54] -rw-r--r-- 2 boincer boincer    542894 Jul 26 01:31 input.tar.gz
[2025-07-26 03:54:54] -rw------- 1 boincer boincer 201063350 Jul 26 03:53 HITS.pool.root.1
[2025-07-26 03:54:54] -rw------- 1 boincer boincer   1136640 Jul 26 03:54 result.tar.gz
03:54:56 (26767): run_atlas exited; CPU time 63250.608317
03:54:56 (26767): called boinc_finish(0)

</stderr_txt>
]]>

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