Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
18:27:04 (3653146): wrapper (7.7.26015): starting
18:27:04 (3653146): wrapper: running run_atlas (--nthreads 4)
[2025-07-26 18:27:04] Arguments: --nthreads 4
[2025-07-26 18:27:04] Threads: 4
[2025-07-26 18:27:04] Checking for CVMFS
[2025-07-26 18:27:05] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-26 18:27:05] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-26 18:27:05] Running cvmfs_config stat atlas.cern.ch
[2025-07-26 18:27:05] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-26 18:27:05] 2.9.2.0 2645308 2892 92716 148783 2 57 34880273 36864000 0 130560 0 2669493 99.991 107858 3639 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-07-26 18:27:05] CVMFS is ok
[2025-07-26 18:27:05] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-26 18:27:05] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-26 18:27:05] Further information can be found at the LHC@home message board.
[2025-07-26 18:27:05] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-26 18:27:05] Checking for apptainer binary...
[2025-07-26 18:27:05] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-26 18:27:05] Running /usr/bin/apptainer --version
[2025-07-26 18:27:05] apptainer version 1.4.1-1.1
[2025-07-26 18:27:05] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-26 18:27:05] thA350
[2025-07-26 18:27:05] apptainer works
[2025-07-26 18:27:05] Set ATHENA_PROC_NUMBER=4
[2025-07-26 18:27:05] Set ATHENA_CORE_NUMBER=4
[2025-07-26 18:27:05] Starting ATLAS job with PandaID=6745065551
[2025-07-26 18:27:05] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-26 19:34:45]  *** The last 200 lines of the pilot log: ***
[2025-07-26 19:34:45]  is_tar=False
[2025-07-26 19:34:45]  lfn=log.45743349._028529.job.log.tgz.1
[2025-07-26 19:34:45]  mtime=0
[2025-07-26 19:34:45]  protocol_id=None
[2025-07-26 19:34:45]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-07-26 19:34:45]  replicas=None
[2025-07-26 19:34:45]  scope=mc23_13p6TeV
[2025-07-26 19:34:45]  status=None
[2025-07-26 19:34:45]  status_code=0
[2025-07-26 19:34:45]  storage_token=
[2025-07-26 19:34:45]  surl=/local/data/boinc/slots/0/PanDA_Pilot-6745065551/log.45743349._028529.job.log.tgz.1
[2025-07-26 19:34:45]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/03/c0/log.45743349._028529.job.log.tgz.1
[2025-07-26 19:34:45]  workdir=None
[2025-07-26 19:34:45] ]
[2025-07-26 19:34:45] 2025-07-26 17:34:06,507 | INFO     | transferring file log.45743349._028529.job.log.tgz.1 from /local/data/boinc/slots/0/PanDA_Pilot-6745065551/log.45743349._028529.job.log.tgz.1 to /local/data/boinc/
[2025-07-26 19:34:45] 2025-07-26 17:34:06,507 | INFO     | executing command: /usr/bin/env mv /local/data/boinc/slots/0/PanDA_Pilot-6745065551/log.45743349._028529.job.log.tgz.1 /local/data/boinc/slots/0/log.45743349._0285
[2025-07-26 19:34:45] 2025-07-26 17:34:06,520 | INFO     | adding to output.list: log.45743349._028529.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/03/c0/log.45743349._028529.job.log.tg
[2025-07-26 19:34:45] 2025-07-26 17:34:06,520 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-26 19:34:45] 2025-07-26 17:34:06,520 | INFO     | summary of transferred files:
[2025-07-26 19:34:45] 2025-07-26 17:34:06,520 | INFO     |  -- lfn=log.45743349._028529.job.log.tgz.1, status_code=0, status=transferred
[2025-07-26 19:34:45] 2025-07-26 17:34:06,520 | INFO     | stage-out finished correctly
[2025-07-26 19:34:45] 2025-07-26 17:34:08,271 | INFO     | monitor loop #311: job 0:6745065551 is in state 'finished'
[2025-07-26 19:34:45] 2025-07-26 17:34:08,271 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-26 19:34:45] 2025-07-26 17:34:09,509 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-26 19:34:45] 2025-07-26 17:34:10,318 | INFO     | job 6745065551 has state=finished
[2025-07-26 19:34:45] 2025-07-26 17:34:10,319 | INFO     | preparing for final server update for job 6745065551 in state='finished'
[2025-07-26 19:34:45] 2025-07-26 17:34:10,775 | INFO     | monitor loop #312: job 0:6745065551 is in state 'finished'
[2025-07-26 19:34:45] 2025-07-26 17:34:10,775 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-26 19:34:45] 2025-07-26 17:34:10,916 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2025-07-26 19:34:45] 2025-07-26 17:34:10,916 | INFO     | this job has now completed (state=finished)
[2025-07-26 19:34:45] 2025-07-26 17:34:10,916 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-26 19:34:45] 2025-07-26 17:34:10,916 | INFO     | log transfer has been attempted: DONE
[2025-07-26 19:34:45] 2025-07-26 17:34:10,916 | INFO     | job 6745065551 has finished - writing final server update
[2025-07-26 19:34:45] 2025-07-26 17:34:10,916 | INFO     | total number of processed events: 400 (read)
[2025-07-26 19:34:45] 2025-07-26 17:34:10,917 | INFO     | executing command: lscpu
[2025-07-26 19:34:45] 2025-07-26 17:34:10,933 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-26 19:34:45] 2025-07-26 17:34:13,279 | INFO     | monitor loop #313: job 0:6745065551 is in state 'finished'
[2025-07-26 19:34:45] 2025-07-26 17:34:13,280 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-26 19:34:45] 2025-07-26 17:34:13,349 | INFO     | CPU arch script returned: x86-64-v3
[2025-07-26 19:34:45] 2025-07-26 17:34:13,350 | INFO     | found 8 cores (8 cores per socket, 1 socket) HT, CPU MHz: 3295.93125
[2025-07-26 19:34:45] 2025-07-26 17:34:13,351 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6745065551/memory_monitor_summary.json (trf name=prmon)
[2025-07-26 19:34:45] 2025-07-26 17:34:13,352 | INFO     | extracted standard info from prmon json
[2025-07-26 19:34:45] 2025-07-26 17:34:13,352 | INFO     | extracted standard memory fields from prmon json
[2025-07-26 19:34:45] 2025-07-26 17:34:13,352 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-26 19:34:45] 2025-07-26 17:34:13,352 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-26 19:34:45] 2025-07-26 17:34:13,352 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-26 19:34:45] 2025-07-26 17:34:13,352 | INFO     | fitting pss+swap vs Time
[2025-07-26 19:34:45] 2025-07-26 17:34:13,353 | INFO     | sum of square deviations: 63666310.0
[2025-07-26 19:34:45] 2025-07-26 17:34:13,353 | INFO     | sum of deviations: -7873949479.000001
[2025-07-26 19:34:45] 2025-07-26 17:34:13,353 | INFO     | mean x: 1753549325.0
[2025-07-26 19:34:45] 2025-07-26 17:34:13,353 | INFO     | mean y: 2583947.474576271
[2025-07-26 19:34:45] 2025-07-26 17:34:13,353 | INFO     | -- intersect: 216873308730.87344
[2025-07-26 19:34:45] 2025-07-26 17:34:13,353 | INFO     | intersect: 216873308730.87344
[2025-07-26 19:34:45] 2025-07-26 17:34:13,353 | INFO     | chi2: 0.033255068032132046
[2025-07-26 19:34:45] 2025-07-26 17:34:13,353 | INFO     | -- intersect: 216873308730.87344
[2025-07-26 19:34:45] 2025-07-26 17:34:13,353 | INFO     | current memory leak: -123.68 B/s (using 59 data points, chi2=0.03)
[2025-07-26 19:34:45] 2025-07-26 17:34:13,353 | INFO     | could have reported an average CPU frequency of 3779 MHz (6 samples)
[2025-07-26 19:34:45] 2025-07-26 17:34:13,353 | INFO     | ..............................
[2025-07-26 19:34:45] 2025-07-26 17:34:13,353 | INFO     | . Timing measurements:
[2025-07-26 19:34:45] 2025-07-26 17:34:13,353 | INFO     | . get job = 0 s
[2025-07-26 19:34:45] 2025-07-26 17:34:13,353 | INFO     | . initial setup = 1 s
[2025-07-26 19:34:45] 2025-07-26 17:34:13,353 | INFO     | . payload setup = 3 s
[2025-07-26 19:34:45] 2025-07-26 17:34:13,353 | INFO     | . stage-in = 0 s
[2025-07-26 19:34:45] 2025-07-26 17:34:13,353 | INFO     | . payload execution = 3994 s
[2025-07-26 19:34:45] 2025-07-26 17:34:13,353 | INFO     | . stage-out = 0 s
[2025-07-26 19:34:45] 2025-07-26 17:34:13,353 | INFO     | . log creation = 0 s
[2025-07-26 19:34:45] 2025-07-26 17:34:13,353 | INFO     | ..............................
[2025-07-26 19:34:45] 2025-07-26 17:34:13,473 | INFO     | 
[2025-07-26 19:34:45] 2025-07-26 17:34:13,473 | INFO     | job summary report
[2025-07-26 19:34:45] 2025-07-26 17:34:13,473 | INFO     | --------------------------------------------------
[2025-07-26 19:34:45] 2025-07-26 17:34:13,473 | INFO     | PanDA job id: 6745065551
[2025-07-26 19:34:45] 2025-07-26 17:34:13,473 | INFO     | task id: 45743349
[2025-07-26 19:34:45] 2025-07-26 17:34:13,473 | INFO     | errors: (none)
[2025-07-26 19:34:45] 2025-07-26 17:34:13,474 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-26 19:34:45] 2025-07-26 17:34:13,474 | INFO     | pilot state: finished 
[2025-07-26 19:34:45] 2025-07-26 17:34:13,474 | INFO     | transexitcode: 0
[2025-07-26 19:34:45] 2025-07-26 17:34:13,474 | INFO     | exeerrorcode: 0
[2025-07-26 19:34:45] 2025-07-26 17:34:13,474 | INFO     | exeerrordiag: 
[2025-07-26 19:34:45] 2025-07-26 17:34:13,474 | INFO     | exitcode: 0
[2025-07-26 19:34:45] 2025-07-26 17:34:13,474 | INFO     | exitmsg: OK
[2025-07-26 19:34:45] 2025-07-26 17:34:13,474 | INFO     | cpuconsumptiontime: 15045 s
[2025-07-26 19:34:45] 2025-07-26 17:34:13,474 | INFO     | nevents: 400
[2025-07-26 19:34:45] 2025-07-26 17:34:13,474 | INFO     | neventsw: 0
[2025-07-26 19:34:45] 2025-07-26 17:34:13,474 | INFO     | pid: 3663459
[2025-07-26 19:34:45] 2025-07-26 17:34:13,474 | INFO     | pgrp: 3663459
[2025-07-26 19:34:45] 2025-07-26 17:34:13,474 | INFO     | corecount: 4
[2025-07-26 19:34:45] 2025-07-26 17:34:13,474 | INFO     | event service: False
[2025-07-26 19:34:45] 2025-07-26 17:34:13,474 | INFO     | sizes: {0: 2397478, 3: 2397740, 11: 2397768, 4001: 2423765, 4003: 2432769, 4006: 2432825, 4010: 2433147}
[2025-07-26 19:34:45] 2025-07-26 17:34:13,474 | INFO     | --------------------------------------------------
[2025-07-26 19:34:45] 2025-07-26 17:34:13,474 | INFO     | 
[2025-07-26 19:34:45] 2025-07-26 17:34:13,474 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-07-26 19:34:45] 2025-07-26 17:34:13,489 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-26 19:34:45] 2025-07-26 17:34:13,489 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-26 19:34:45] 2025-07-26 17:34:13,489 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-26 19:34:45] 2025-07-26 17:34:13,489 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-26 19:34:45] 2025-07-26 17:34:13,490 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-26 19:34:45] 2025-07-26 17:34:13,490 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-26 19:34:45] 2025-07-26 17:34:13,490 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-26 19:34:45] 2025-07-26 17:34:13,490 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-26 19:34:45] 2025-07-26 17:34:13,490 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-26 19:34:45] 2025-07-26 17:34:13,490 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-26 19:34:45] 2025-07-26 17:34:13,490 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-26 19:34:45] 2025-07-26 17:34:13,490 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-26 19:34:45] 2025-07-26 17:34:13,490 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-26 19:34:45] 2025-07-26 17:34:13,490 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-26 19:34:45] 2025-07-26 17:34:13,490 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-26 19:34:45] 2025-07-26 17:34:13,490 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-26 19:34:45] 2025-07-26 17:34:13,490 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-26 19:34:45] 2025-07-26 17:34:13,490 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-26 19:34:45] 2025-07-26 17:34:13,490 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-26 19:34:45] 2025-07-26 17:34:13,490 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-26 19:34:45] 2025-07-26 17:34:13,490 | INFO     | job 6745065551 has completed (purged errors)
[2025-07-26 19:34:45] 2025-07-26 17:34:13,490 | INFO     | overall cleanup function is called
[2025-07-26 19:34:45] 2025-07-26 17:34:14,497 | INFO     | --- collectZombieJob: --- 10, [3663459]
[2025-07-26 19:34:45] 2025-07-26 17:34:14,497 | INFO     | zombie collector waiting for pid 3663459
[2025-07-26 19:34:45] 2025-07-26 17:34:14,497 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-26 19:34:45] 2025-07-26 17:34:14,497 | INFO     | collected zombie processes
[2025-07-26 19:34:45] 2025-07-26 17:34:14,497 | INFO     | will attempt to kill all subprocesses of pid=3663459
[2025-07-26 19:34:45] 2025-07-26 17:34:14,539 | INFO     | process IDs to be killed: [3663459] (in reverse order)
[2025-07-26 19:34:45] 2025-07-26 17:34:14,563 | WARNING  | found no corresponding commands to process id(s)
[2025-07-26 19:34:45] 2025-07-26 17:34:14,563 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-26 19:34:45] 2025-07-26 17:34:14,564 | INFO     | did not find any defunct processes belonging to 3663459
[2025-07-26 19:34:45] 2025-07-26 17:34:14,565 | INFO     | did not find any defunct processes belonging to 3663459
[2025-07-26 19:34:45] 2025-07-26 17:34:14,565 | INFO     | ready for new job
[2025-07-26 19:34:45] 2025-07-26 17:34:14,565 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-26 19:34:45] 2025-07-26 17:34:14,566 | INFO     | ***************************************
[2025-07-26 19:34:45] 2025-07-26 17:34:14,566 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-26 19:34:45] 2025-07-26 17:34:14,566 | INFO     | ***************************************
[2025-07-26 19:34:45] 2025-07-26 17:34:14,566 | INFO     | 
[2025-07-26 19:34:45] 2025-07-26 17:34:14,566 | INFO     | architecture information:
[2025-07-26 19:34:45] 2025-07-26 17:34:14,566 | INFO     | executing command: cat /etc/os-release
[2025-07-26 19:34:45] 2025-07-26 17:34:14,575 | INFO     | cat /etc/os-release:
[2025-07-26 19:34:45] NAME="CentOS Linux"
[2025-07-26 19:34:45] VERSION="7 (Core)"
[2025-07-26 19:34:45] ID="centos"
[2025-07-26 19:34:45] ID_LIKE="rhel fedora"
[2025-07-26 19:34:45] VERSION_ID="7"
[2025-07-26 19:34:45] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-26 19:34:45] ANSI_COLOR="0;31"
[2025-07-26 19:34:45] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-26 19:34:45] HOME_URL="https://www.centos.org/"
[2025-07-26 19:34:45] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-26 19:34:45] 
[2025-07-26 19:34:45] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-26 19:34:45] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-26 19:34:45] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-26 19:34:45] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-26 19:34:45] 
[2025-07-26 19:34:45] 2025-07-26 17:34:14,575 | INFO     | ***************************************
[2025-07-26 19:34:45] 2025-07-26 17:34:15,078 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-07-26 19:34:45] 2025-07-26 17:34:15,092 | INFO     | sufficient remaining disk space (365366870016 B)
[2025-07-26 19:34:45] 2025-07-26 17:34:15,092 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-26 19:34:45] 2025-07-26 17:34:15,092 | INFO     | current server update state: UPDATING_FINAL
[2025-07-26 19:34:45] 2025-07-26 17:34:15,092 | INFO     | update_server=False
[2025-07-26 19:34:45] 2025-07-26 17:34:15,092 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-26 19:34:45] 2025-07-26 17:34:15,092 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-26 19:34:45] 2025-07-26 17:34:15,092 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-26 19:34:45] 2025-07-26 17:34:15,092 | INFO     | aborting loop
[2025-07-26 19:34:45] 2025-07-26 17:34:15,092 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-26 19:34:45] 2025-07-26 17:34:15,273 | INFO     | all data control threads have been joined
[2025-07-26 19:34:45] 2025-07-26 17:34:15,547 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-26 19:34:45] 2025-07-26 17:34:15,585 | INFO     | all job control threads have been joined
[2025-07-26 19:34:45] 2025-07-26 17:34:15,633 | INFO     | all payload control threads have been joined
[2025-07-26 19:34:45] 2025-07-26 17:34:16,098 | INFO     | [job] retrieve thread has finished
[2025-07-26 19:34:45] 2025-07-26 17:34:16,098 | INFO     | [job] job monitor thread has finished
[2025-07-26 19:34:45] 2025-07-26 17:34:16,098 | INFO     | [job] queue monitor thread has finished
[2025-07-26 19:34:45] 2025-07-26 17:34:16,279 | INFO     | [data] control thread has finished
[2025-07-26 19:34:45] 2025-07-26 17:34:16,590 | INFO     | [payload] execute_payloads thread has finished
[2025-07-26 19:34:45] 2025-07-26 17:34:16,590 | INFO     | [job] control thread has finished
[2025-07-26 19:34:45] 2025-07-26 17:34:16,639 | INFO     | [payload] control thread has finished
[2025-07-26 19:34:45] 2025-07-26 17:34:16,864 | INFO     | [payload] failed_post thread has finished
[2025-07-26 19:34:45] 2025-07-26 17:34:17,079 | INFO     | [data] copytool_in thread has finished
[2025-07-26 19:34:45] 2025-07-26 17:34:17,095 | INFO     | [data] copytool_out thread has finished
[2025-07-26 19:34:45] 2025-07-26 17:34:17,144 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-26 19:34:45] 2025-07-26 17:34:17,402 | INFO     | [payload] validate_post thread has finished
[2025-07-26 19:34:45] 2025-07-26 17:34:17,518 | INFO     | [job] validate thread has finished
[2025-07-26 19:34:45] 2025-07-26 17:34:17,524 | INFO     | [job] create_data_payload thread has finished
[2025-07-26 19:34:45] 2025-07-26 17:34:17,596 | INFO     | [payload] validate_pre thread has finished
[2025-07-26 19:34:45] 2025-07-26 17:34:19,554 | INFO     | [data] queue_monitor thread has finished
[2025-07-26 19:34:45] 2025-07-26 17:34:21,284 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140368318154560)>', '<ExcThread(monitor, started 140367827552000)>']
[2025-07-26 19:34:45] 2025-07-26 17:34:26,306 | INFO     | all workflow threads have been joined
[2025-07-26 19:34:45] 2025-07-26 17:34:26,306 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-26 19:34:45] 2025-07-26 17:34:26,306 | INFO     | traces error code: 0
[2025-07-26 19:34:45] 2025-07-26 17:34:26,306 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-26 19:34:45] 2025-07-26 17:34:45,147 | INFO     | PID=3656846 has CPU usage=1.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-26 19:34:45] 2025-07-26 17:34:45,147 | INFO     | found 0 job(s) in 20 queues
[2025-07-26 19:34:45] 2025-07-26 17:34:45,147 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-26 19:34:45] 2025-07-26 17:34:45,147 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-26 19:34:45] 2025-07-26 17:34:45,147 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-26 19:34:45] 2025-07-26 17:34:45,147 | INFO     | [monitor] control thread has ended
[2025-07-26 19:34:45] 2025-07-26 17:34:45,191 [wrapper] ==== pilot stdout END ====
[2025-07-26 19:34:45] 2025-07-26 17:34:45,194 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-26 19:34:45] 2025-07-26 17:34:45,197 [wrapper] pilotpid: 3656846
[2025-07-26 19:34:45] 2025-07-26 17:34:45,199 [wrapper] Pilot exit status: 0
[2025-07-26 19:34:45] 2025-07-26 17:34:45,206 [wrapper] pandaids: 6745065551
[2025-07-26 19:34:45] 2025-07-26 17:34:45,223 [wrapper] cleanup supervisor_pilot 3673483 3656847
[2025-07-26 19:34:45] 2025-07-26 17:34:45,226 [wrapper] Test setup, not cleaning
[2025-07-26 19:34:45] 2025-07-26 17:34:45,228 [wrapper] apfmon messages muted
[2025-07-26 19:34:45] 2025-07-26 17:34:45,230 [wrapper] ==== wrapper stdout END ====
[2025-07-26 19:34:45] 2025-07-26 17:34:45,232 [wrapper] ==== wrapper stderr END ====
[2025-07-26 19:34:45]  *** Error codes and diagnostics ***
[2025-07-26 19:34:45]     "exeErrorCode": 0,
[2025-07-26 19:34:45]     "exeErrorDiag": "",
[2025-07-26 19:34:45]     "pilotErrorCode": 0,
[2025-07-26 19:34:45]     "pilotErrorDiag": "",
[2025-07-26 19:34:45]  *** Listing of results directory ***
[2025-07-26 19:34:45] total 347944
[2025-07-26 19:34:45] -rw-r--r-- 1 boinc boinc    530466 Jul 26 00:55 pilot3.tar.gz
[2025-07-26 19:34:45] -rw-r--r-- 1 boinc boinc      5112 Jul 26 01:00 queuedata.json
[2025-07-26 19:34:45] -rwx------ 1 boinc boinc     36292 Jul 26 01:00 runpilot2-wrapper.sh
[2025-07-26 19:34:45] -rw-r--r-- 1 boinc boinc       100 Jul 26 18:27 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-26 19:34:45] -rwxr-xr-x 1 boinc boinc      7986 Jul 26 18:27 run_atlas
[2025-07-26 19:34:45] -rw-r--r-- 1 boinc boinc       105 Jul 26 18:27 job.xml
[2025-07-26 19:34:45] -rw-r--r-- 2 boinc boinc 149692375 Jul 26 18:27 EVNT.45743347._001594.pool.root.1
[2025-07-26 19:34:45] drwxrwx--x 2 boinc boinc      4096 Jul 26 18:27 shared
[2025-07-26 19:34:45] -rw-r--r-- 2 boinc boinc    542890 Jul 26 18:27 input.tar.gz
[2025-07-26 19:34:45] -rw-r--r-- 2 boinc boinc     15095 Jul 26 18:27 start_atlas.sh
[2025-07-26 19:34:45] -rw-r--r-- 1 boinc boinc         0 Jul 26 18:27 boinc_setup_complete
[2025-07-26 19:34:45] -rw-r--r-- 1 boinc boinc      6524 Jul 26 18:27 init_data.xml
[2025-07-26 19:34:45] -rw-r--r-- 1 boinc boinc         0 Jul 26 18:27 boinc_lockfile
[2025-07-26 19:34:45] -rw-r--r-- 1 boinc boinc      2563 Jul 26 18:27 pandaJob.out
[2025-07-26 19:34:45] -rw------- 1 boinc boinc    980117 Jul 26 18:27 agis_schedconf.cvmfs.json
[2025-07-26 19:34:45] -rw------- 1 boinc boinc   1593052 Jul 26 18:27 agis_ddmendpoints.agis.ALL.json
[2025-07-26 19:34:45] drwx------ 4 boinc boinc      4096 Jul 26 18:27 pilot3
[2025-07-26 19:34:45] -rw------- 1 boinc boinc 201469594 Jul 26 19:33 HITS.45743349._028529.pool.root.1
[2025-07-26 19:34:45] -rw-r--r-- 1 boinc boinc       529 Jul 26 19:33 boinc_task_state.xml
[2025-07-26 19:34:45] -rw------- 1 boinc boinc      1019 Jul 26 19:34 memory_monitor_summary.json
[2025-07-26 19:34:45] -rw------- 1 boinc boinc    227612 Jul 26 19:34 log.45743349._028529.job.log.tgz.1
[2025-07-26 19:34:45] -rw------- 1 boinc boinc      7756 Jul 26 19:34 heartbeat.json
[2025-07-26 19:34:45] -rw-r--r-- 1 boinc boinc      8192 Jul 26 19:34 boinc_mmap_file
[2025-07-26 19:34:45] -rw-r--r-- 1 boinc boinc        27 Jul 26 19:34 wrapper_checkpoint.txt
[2025-07-26 19:34:45] -rw------- 1 boinc boinc       747 Jul 26 19:34 pilotlog.txt
[2025-07-26 19:34:45] -rw------- 1 boinc boinc        95 Jul 26 19:34 pilot_heartbeat.json
[2025-07-26 19:34:45] -rw------- 1 boinc boinc    402559 Jul 26 19:34 log.45743349._028529.job.log.1
[2025-07-26 19:34:45] -rw------- 1 boinc boinc       357 Jul 26 19:34 output.list
[2025-07-26 19:34:45] -rw-r--r-- 1 boinc boinc       620 Jul 26 19:34 runtime_log
[2025-07-26 19:34:45] -rw------- 1 boinc boinc    645120 Jul 26 19:34 result.tar.gz
[2025-07-26 19:34:45] -rw------- 1 boinc boinc       658 Jul 26 19:34 tc9LDmIagz7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm1fQLDm8vVLdn.diag
[2025-07-26 19:34:45] -rw-r--r-- 1 boinc boinc      8734 Jul 26 19:34 runtime_log.err
[2025-07-26 19:34:45] -rw-r--r-- 1 boinc boinc     21597 Jul 26 19:34 stderr.txt
[2025-07-26 19:34:45] HITS file was successfully produced:
[2025-07-26 19:34:45] -rw------- 1 boinc boinc 201469594 Jul 26 19:33 shared/HITS.pool.root.1
[2025-07-26 19:34:45]  *** Contents of shared directory: ***
[2025-07-26 19:34:45] total 344120
[2025-07-26 19:34:45] -rw-r--r-- 2 boinc boinc 149692375 Jul 26 18:27 ATLAS.root_0
[2025-07-26 19:34:45] -rw-r--r-- 2 boinc boinc    542890 Jul 26 18:27 input.tar.gz
[2025-07-26 19:34:45] -rw-r--r-- 2 boinc boinc     15095 Jul 26 18:27 start_atlas.sh
[2025-07-26 19:34:45] -rw------- 1 boinc boinc 201469594 Jul 26 19:33 HITS.pool.root.1
[2025-07-26 19:34:45] -rw------- 1 boinc boinc    645120 Jul 26 19:34 result.tar.gz
19:34:46 (3653146): run_atlas exited; CPU time 15056.782700
19:34:46 (3653146): called boinc_finish(0)

</stderr_txt>
]]>

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