Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
07:09:06 (110170): wrapper (7.7.26015): starting
07:09:06 (110170): wrapper: running run_atlas (--nthreads 4)
[2025-07-28 07:09:06] Arguments: --nthreads 4
[2025-07-28 07:09:06] Threads: 4
[2025-07-28 07:09:06] Checking for CVMFS
[2025-07-28 07:09:06] No cvmfs_config command found, will try listing directly
[2025-07-28 07:09:06] CVMFS is ok
[2025-07-28 07:09:06] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-28 07:09:06] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-28 07:09:06] Further information can be found at the LHC@home message board.
[2025-07-28 07:09:06] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-28 07:09:06] Checking for apptainer binary...
[2025-07-28 07:09:06] which: no apptainer in ((null))
[2025-07-28 07:09:06] apptainer is not installed, using version from CVMFS
[2025-07-28 07:09:06] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-28 07:09:06] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot56/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut17.grid.cesnet.cz
[2025-07-28 07:09:06] apptainer works
[2025-07-28 07:09:06] Set ATHENA_PROC_NUMBER=4
[2025-07-28 07:09:06] Set ATHENA_CORE_NUMBER=4
[2025-07-28 07:09:06] Starting ATLAS job with PandaID=6745064164
[2025-07-28 07:09:06] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot56/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
09:45:25 (891453): wrapper (7.7.26015): starting
09:45:25 (891453): wrapper: running run_atlas (--nthreads 4)
[2025-07-28 09:45:25] Arguments: --nthreads 4
[2025-07-28 09:45:25] Threads: 4
[2025-07-28 09:45:25] This job has been restarted, cleaning up previous attempt
[2025-07-28 09:45:25] Checking for CVMFS
[2025-07-28 09:45:25] No cvmfs_config command found, will try listing directly
[2025-07-28 09:45:25] CVMFS is ok
[2025-07-28 09:45:25] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-28 09:45:25] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-28 09:45:25] Further information can be found at the LHC@home message board.
[2025-07-28 09:45:25] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-28 09:45:25] Checking for apptainer binary...
[2025-07-28 09:45:25] which: no apptainer in ((null))
[2025-07-28 09:45:25] apptainer is not installed, using version from CVMFS
[2025-07-28 09:45:25] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-28 09:45:25] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot56/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut17.grid.cesnet.cz
[2025-07-28 09:45:25] apptainer works
[2025-07-28 09:45:25] Set ATHENA_PROC_NUMBER=4
[2025-07-28 09:45:25] Set ATHENA_CORE_NUMBER=4
[2025-07-28 09:45:25] Starting ATLAS job with PandaID=6745064164
[2025-07-28 09:45:25] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot56/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-28 12:58:16]  *** The last 200 lines of the pilot log: ***
[2025-07-28 12:58:16] 2025-07-28 10:57:42,438 | INFO     | extracted standard memory fields from prmon json
[2025-07-28 12:58:16] 2025-07-28 10:57:42,438 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-28 12:58:16] 2025-07-28 10:57:42,438 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-28 12:58:16] 2025-07-28 10:57:42,439 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-28 12:58:16] 2025-07-28 10:57:42,442 | INFO     | fitting pss+swap vs Time
[2025-07-28 12:58:16] 2025-07-28 10:57:42,442 | INFO     | sum of square deviations: 2060343747.0
[2025-07-28 12:58:16] 2025-07-28 10:57:42,443 | INFO     | sum of deviations: 27904711171.500004
[2025-07-28 12:58:16] 2025-07-28 10:57:42,443 | INFO     | mean x: 1753694475.5
[2025-07-28 12:58:16] 2025-07-28 10:57:42,444 | INFO     | mean y: 2312346.973404255
[2025-07-28 12:58:16] 2025-07-28 10:57:42,444 | INFO     | -- intersect: -23749228090.45958
[2025-07-28 12:58:16] 2025-07-28 10:57:42,444 | INFO     | intersect: -23749228090.45958
[2025-07-28 12:58:16] 2025-07-28 10:57:42,444 | INFO     | chi2: 1.4658030469306873
[2025-07-28 12:58:16] 2025-07-28 10:57:42,444 | INFO     | sum of square deviations: 1900284932.0
[2025-07-28 12:58:16] 2025-07-28 10:57:42,445 | INFO     | sum of deviations: 27003303161.0
[2025-07-28 12:58:16] 2025-07-28 10:57:42,446 | INFO     | mean x: 1753694323.0
[2025-07-28 12:58:16] 2025-07-28 10:57:42,446 | INFO     | mean y: 2311487.950819672
[2025-07-28 12:58:16] 2025-07-28 10:57:42,446 | INFO     | -- intersect: -24917919503.857967
[2025-07-28 12:58:16] 2025-07-28 10:57:42,446 | INFO     | intersect: -24917919503.857967
[2025-07-28 12:58:16] 2025-07-28 10:57:42,446 | INFO     | chi2: 1.4667166346304399
[2025-07-28 12:58:16] 2025-07-28 10:57:42,446 | INFO     | current chi2=1.4667166346304399 (change=-0.0623267704119995 %)
[2025-07-28 12:58:16] 2025-07-28 10:57:42,446 | INFO     | right removable region: 182
[2025-07-28 12:58:16] 2025-07-28 10:57:42,446 | INFO     | sum of square deviations: 1900284932.0
[2025-07-28 12:58:16] 2025-07-28 10:57:42,448 | INFO     | sum of deviations: 1247151100.0
[2025-07-28 12:58:16] 2025-07-28 10:57:42,448 | INFO     | mean x: 1753694628.0
[2025-07-28 12:58:16] 2025-07-28 10:57:42,448 | INFO     | mean y: 2337432.398907104
[2025-07-28 12:58:16] 2025-07-28 10:57:42,448 | INFO     | -- intersect: -1148606906.2863457
[2025-07-28 12:58:16] 2025-07-28 10:57:42,448 | INFO     | intersect: -1148606906.2863457
[2025-07-28 12:58:16] 2025-07-28 10:57:42,448 | INFO     | chi2: 0.001289109416370639
[2025-07-28 12:58:16] 2025-07-28 10:57:42,448 | INFO     | current chi2=0.001289109416370639 (change=99.91205439099953 %)
[2025-07-28 12:58:16] 2025-07-28 10:57:42,449 | INFO     | sum of square deviations: 1748737904.5
[2025-07-28 12:58:16] 2025-07-28 10:57:42,450 | INFO     | sum of deviations: 472894966.49999994
[2025-07-28 12:58:16] 2025-07-28 10:57:42,450 | INFO     | mean x: 1753694780.5
[2025-07-28 12:58:16] 2025-07-28 10:57:42,450 | INFO     | mean y: 2338207.882022472
[2025-07-28 12:58:16] 2025-07-28 10:57:42,450 | INFO     | -- intersect: -471897200.60412794
[2025-07-28 12:58:16] 2025-07-28 10:57:42,450 | INFO     | intersect: -471897200.60412794
[2025-07-28 12:58:16] 2025-07-28 10:57:42,450 | INFO     | chi2: 0.0005936363496231798
[2025-07-28 12:58:16] 2025-07-28 10:57:42,451 | INFO     | current chi2=0.0005936363496231798 (change=53.949886480970356 %)
[2025-07-28 12:58:16] 2025-07-28 10:57:42,451 | INFO     | sum of square deviations: 1605470102.0
[2025-07-28 12:58:16] 2025-07-28 10:57:42,452 | INFO     | sum of deviations: 319083374.9999999
[2025-07-28 12:58:16] 2025-07-28 10:57:42,452 | INFO     | mean x: 1753694933.0
[2025-07-28 12:58:16] 2025-07-28 10:57:42,452 | INFO     | mean y: 2338371.0693641617
[2025-07-28 12:58:16] 2025-07-28 10:57:42,452 | INFO     | -- intersect: -346204337.53975487
[2025-07-28 12:58:16] 2025-07-28 10:57:42,452 | INFO     | intersect: -346204337.53975487
[2025-07-28 12:58:16] 2025-07-28 10:57:42,453 | INFO     | chi2: 0.0005731415187279389
[2025-07-28 12:58:16] 2025-07-28 10:57:42,453 | INFO     | current chi2=0.0005731415187279389 (change=3.45242182495233 %)
[2025-07-28 12:58:16] 2025-07-28 10:57:42,453 | INFO     | left removable region: 30
[2025-07-28 12:58:16] 2025-07-28 10:57:42,453 | INFO     | sum of square deviations: 1088905998.0
[2025-07-28 12:58:16] 2025-07-28 10:57:42,454 | INFO     | sum of deviations: 552950116.0
[2025-07-28 12:58:16] 2025-07-28 10:57:42,454 | INFO     | mean x: 1753695207.5
[2025-07-28 12:58:16] 2025-07-28 10:57:42,454 | INFO     | mean y: 2337690.5263157897
[2025-07-28 12:58:16] 2025-07-28 10:57:42,454 | INFO     | -- intersect: -888194614.5549618
[2025-07-28 12:58:16] 2025-07-28 10:57:42,455 | INFO     | intersect: -888194614.5549618
[2025-07-28 12:58:16] 2025-07-28 10:57:42,455 | INFO     | chi2: 5.025785106433522e-05
[2025-07-28 12:58:16] 2025-07-28 10:57:42,455 | INFO     | -- intersect: -888194614.5549618
[2025-07-28 12:58:16] 2025-07-28 10:57:42,455 | INFO     | current memory leak: 0.51 B/s (using 152 data points, chi2=0.00)
[2025-07-28 12:58:16] 2025-07-28 10:57:42,456 | INFO     | could have reported an average CPU frequency of 2683 MHz (10 samples)
[2025-07-28 12:58:16] 2025-07-28 10:57:42,456 | INFO     | ..............................
[2025-07-28 12:58:16] 2025-07-28 10:57:42,456 | INFO     | . Timing measurements:
[2025-07-28 12:58:16] 2025-07-28 10:57:42,456 | INFO     | . get job = 0 s
[2025-07-28 12:58:16] 2025-07-28 10:57:42,456 | INFO     | . initial setup = 1 s
[2025-07-28 12:58:16] 2025-07-28 10:57:42,456 | INFO     | . payload setup = 9 s
[2025-07-28 12:58:16] 2025-07-28 10:57:42,456 | INFO     | . stage-in = 0 s
[2025-07-28 12:58:16] 2025-07-28 10:57:42,456 | INFO     | . payload execution = 11474 s
[2025-07-28 12:58:16] 2025-07-28 10:57:42,456 | INFO     | . stage-out = 1 s
[2025-07-28 12:58:16] 2025-07-28 10:57:42,456 | INFO     | . log creation = 0 s
[2025-07-28 12:58:16] 2025-07-28 10:57:42,457 | INFO     | ..............................
[2025-07-28 12:58:16] 2025-07-28 10:57:42,554 | INFO     | 
[2025-07-28 12:58:16] 2025-07-28 10:57:42,555 | INFO     | job summary report
[2025-07-28 12:58:16] 2025-07-28 10:57:42,555 | INFO     | --------------------------------------------------
[2025-07-28 12:58:16] 2025-07-28 10:57:42,555 | INFO     | PanDA job id: 6745064164
[2025-07-28 12:58:16] 2025-07-28 10:57:42,555 | INFO     | task id: 45743349
[2025-07-28 12:58:16] 2025-07-28 10:57:42,555 | INFO     | errors: (none)
[2025-07-28 12:58:16] 2025-07-28 10:57:42,555 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-28 12:58:16] 2025-07-28 10:57:42,555 | INFO     | pilot state: finished 
[2025-07-28 12:58:16] 2025-07-28 10:57:42,555 | INFO     | transexitcode: 0
[2025-07-28 12:58:16] 2025-07-28 10:57:42,556 | INFO     | exeerrorcode: 0
[2025-07-28 12:58:16] 2025-07-28 10:57:42,556 | INFO     | exeerrordiag: 
[2025-07-28 12:58:16] 2025-07-28 10:57:42,556 | INFO     | exitcode: 0
[2025-07-28 12:58:16] 2025-07-28 10:57:42,556 | INFO     | exitmsg: OK
[2025-07-28 12:58:16] 2025-07-28 10:57:42,556 | INFO     | cpuconsumptiontime: 43343 s
[2025-07-28 12:58:16] 2025-07-28 10:57:42,556 | INFO     | nevents: 400
[2025-07-28 12:58:16] 2025-07-28 10:57:42,556 | INFO     | neventsw: 0
[2025-07-28 12:58:16] 2025-07-28 10:57:42,556 | INFO     | pid: 907997
[2025-07-28 12:58:16] 2025-07-28 10:57:42,556 | INFO     | pgrp: 907997
[2025-07-28 12:58:16] 2025-07-28 10:57:42,556 | INFO     | corecount: 4
[2025-07-28 12:58:16] 2025-07-28 10:57:42,556 | INFO     | event service: False
[2025-07-28 12:58:16] 2025-07-28 10:57:42,556 | INFO     | sizes: {0: 2397315, 1: 2397514, 7: 2397776, 12: 2397804, 11487: 2427723, 11489: 2436927, 11507: 2437065}
[2025-07-28 12:58:16] 2025-07-28 10:57:42,557 | INFO     | --------------------------------------------------
[2025-07-28 12:58:16] 2025-07-28 10:57:42,557 | INFO     | 
[2025-07-28 12:58:16] 2025-07-28 10:57:42,557 | INFO     | executing command: ls -lF /scratch/boinc/var/slot56/slots/0
[2025-07-28 12:58:16] 2025-07-28 10:57:42,589 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-28 12:58:16] 2025-07-28 10:57:42,589 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-28 12:58:16] 2025-07-28 10:57:42,589 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-28 12:58:16] 2025-07-28 10:57:42,589 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-28 12:58:16] 2025-07-28 10:57:42,589 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-28 12:58:16] 2025-07-28 10:57:42,589 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-28 12:58:16] 2025-07-28 10:57:42,590 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-28 12:58:16] 2025-07-28 10:57:42,590 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-28 12:58:16] 2025-07-28 10:57:42,590 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-28 12:58:16] 2025-07-28 10:57:42,590 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-28 12:58:16] 2025-07-28 10:57:42,590 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-28 12:58:16] 2025-07-28 10:57:42,590 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-28 12:58:16] 2025-07-28 10:57:42,590 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-28 12:58:16] 2025-07-28 10:57:42,590 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-28 12:58:16] 2025-07-28 10:57:42,590 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-28 12:58:16] 2025-07-28 10:57:42,590 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-28 12:58:16] 2025-07-28 10:57:42,590 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-28 12:58:16] 2025-07-28 10:57:42,590 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-28 12:58:16] 2025-07-28 10:57:42,590 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-28 12:58:16] 2025-07-28 10:57:42,591 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-28 12:58:16] 2025-07-28 10:57:42,591 | INFO     | job 6745064164 has completed (purged errors)
[2025-07-28 12:58:16] 2025-07-28 10:57:42,591 | INFO     | overall cleanup function is called
[2025-07-28 12:58:16] 2025-07-28 10:57:43,599 | INFO     | --- collectZombieJob: --- 10, [907997]
[2025-07-28 12:58:16] 2025-07-28 10:57:43,599 | INFO     | zombie collector waiting for pid 907997
[2025-07-28 12:58:16] 2025-07-28 10:57:43,599 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-28 12:58:16] 2025-07-28 10:57:43,600 | INFO     | collected zombie processes
[2025-07-28 12:58:16] 2025-07-28 10:57:43,600 | INFO     | will attempt to kill all subprocesses of pid=907997
[2025-07-28 12:58:16] 2025-07-28 10:57:44,404 | INFO     | process IDs to be killed: [907997] (in reverse order)
[2025-07-28 12:58:16] 2025-07-28 10:57:44,682 | WARNING  | found no corresponding commands to process id(s)
[2025-07-28 12:58:16] 2025-07-28 10:57:44,682 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-28 12:58:16] 2025-07-28 10:57:44,710 | INFO     | did not find any defunct processes belonging to 907997
[2025-07-28 12:58:16] 2025-07-28 10:57:44,730 | INFO     | did not find any defunct processes belonging to 907997
[2025-07-28 12:58:16] 2025-07-28 10:57:44,730 | INFO     | ready for new job
[2025-07-28 12:58:16] 2025-07-28 10:57:44,730 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-28 12:58:16] 2025-07-28 10:57:44,733 | INFO     | ***************************************
[2025-07-28 12:58:16] 2025-07-28 10:57:44,733 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-28 12:58:16] 2025-07-28 10:57:44,733 | INFO     | ***************************************
[2025-07-28 12:58:16] 2025-07-28 10:57:44,733 | INFO     | 
[2025-07-28 12:58:16] 2025-07-28 10:57:44,741 | INFO     | architecture information:
[2025-07-28 12:58:16] 2025-07-28 10:57:44,741 | INFO     | executing command: cat /etc/os-release
[2025-07-28 12:58:16] 2025-07-28 10:57:44,759 | INFO     | cat /etc/os-release:
[2025-07-28 12:58:16] NAME="CentOS Linux"
[2025-07-28 12:58:16] VERSION="7 (Core)"
[2025-07-28 12:58:16] ID="centos"
[2025-07-28 12:58:16] ID_LIKE="rhel fedora"
[2025-07-28 12:58:16] VERSION_ID="7"
[2025-07-28 12:58:16] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-28 12:58:16] ANSI_COLOR="0;31"
[2025-07-28 12:58:16] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-28 12:58:16] HOME_URL="https://www.centos.org/"
[2025-07-28 12:58:16] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-28 12:58:16] 
[2025-07-28 12:58:16] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-28 12:58:16] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-28 12:58:16] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-28 12:58:16] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-28 12:58:16] 
[2025-07-28 12:58:16] 2025-07-28 10:57:44,759 | INFO     | ***************************************
[2025-07-28 12:58:16] 2025-07-28 10:57:45,262 | INFO     | executing command: df -mP /scratch/boinc/var/slot56/slots/0
[2025-07-28 12:58:16] 2025-07-28 10:57:45,286 | INFO     | sufficient remaining disk space (3278419001344 B)
[2025-07-28 12:58:16] 2025-07-28 10:57:45,286 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-28 12:58:16] 2025-07-28 10:57:45,286 | INFO     | current server update state: UPDATING_FINAL
[2025-07-28 12:58:16] 2025-07-28 10:57:45,286 | INFO     | update_server=False
[2025-07-28 12:58:16] 2025-07-28 10:57:45,286 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-28 12:58:16] 2025-07-28 10:57:45,287 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-28 12:58:16] 2025-07-28 10:57:45,287 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-28 12:58:16] 2025-07-28 10:57:45,287 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-28 12:58:16] 2025-07-28 10:57:45,288 | INFO     | aborting loop
[2025-07-28 12:58:16] 2025-07-28 10:57:46,267 | INFO     | all data control threads have been joined
[2025-07-28 12:58:16] 2025-07-28 10:57:46,291 | INFO     | [job] retrieve thread has finished
[2025-07-28 12:58:16] 2025-07-28 10:57:46,293 | INFO     | [job] job monitor thread has finished
[2025-07-28 12:58:16] 2025-07-28 10:57:46,374 | INFO     | all job control threads have been joined
[2025-07-28 12:58:16] 2025-07-28 10:57:46,465 | INFO     | [job] create_data_payload thread has finished
[2025-07-28 12:58:16] 2025-07-28 10:57:46,714 | INFO     | [payload] execute_payloads thread has finished
[2025-07-28 12:58:16] 2025-07-28 10:57:46,722 | INFO     | [payload] validate_post thread has finished
[2025-07-28 12:58:16] 2025-07-28 10:57:46,725 | INFO     | all payload control threads have been joined
[2025-07-28 12:58:16] 2025-07-28 10:57:46,767 | INFO     | [data] copytool_in thread has finished
[2025-07-28 12:58:16] 2025-07-28 10:57:46,847 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-28 12:58:16] 2025-07-28 10:57:46,871 | INFO     | [payload] validate_pre thread has finished
[2025-07-28 12:58:16] 2025-07-28 10:57:47,225 | INFO     | [payload] failed_post thread has finished
[2025-07-28 12:58:16] 2025-07-28 10:57:47,273 | INFO     | [data] control thread has finished
[2025-07-28 12:58:16] 2025-07-28 10:57:47,294 | INFO     | [data] copytool_out thread has finished
[2025-07-28 12:58:16] 2025-07-28 10:57:47,379 | INFO     | [job] control thread has finished
[2025-07-28 12:58:16] 2025-07-28 10:57:47,564 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-28 12:58:16] 2025-07-28 10:57:47,727 | INFO     | [job] validate thread has finished
[2025-07-28 12:58:16] 2025-07-28 10:57:47,730 | INFO     | [payload] control thread has finished
[2025-07-28 12:58:16] 2025-07-28 10:57:48,569 | INFO     | [job] queue monitor thread has finished
[2025-07-28 12:58:16] 2025-07-28 10:57:49,293 | INFO     | [data] queue_monitor thread has finished
[2025-07-28 12:58:16] 2025-07-28 10:57:50,695 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22433960589120)>', '<ExcThread(monitor, started 22433719338752)>']
[2025-07-28 12:58:16] 2025-07-28 10:57:55,720 | INFO     | all workflow threads have been joined
[2025-07-28 12:58:16] 2025-07-28 10:57:55,720 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-28 12:58:16] 2025-07-28 10:57:55,721 | INFO     | traces error code: 0
[2025-07-28 12:58:16] 2025-07-28 10:57:55,721 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-28 12:58:16] 2025-07-28 10:58:16,097 | INFO     | PID=895860 has CPU usage=4.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-07-28 12:58:16] 2025-07-28 10:58:16,098 | INFO     | .. there are 27 such processes running
[2025-07-28 12:58:16] 2025-07-28 10:58:16,098 | INFO     | found 0 job(s) in 20 queues
[2025-07-28 12:58:16] 2025-07-28 10:58:16,098 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-28 12:58:16] 2025-07-28 10:58:16,098 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-28 12:58:16] 2025-07-28 10:58:16,098 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-28 12:58:16] 2025-07-28 10:58:16,098 | INFO     | [monitor] control thread has ended
[2025-07-28 12:58:16] 2025-07-28 10:58:16,306 [wrapper] ==== pilot stdout END ====
[2025-07-28 12:58:16] 2025-07-28 10:58:16,318 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-28 12:58:16] 2025-07-28 10:58:16,333 [wrapper] pilotpid: 895860
[2025-07-28 12:58:16] 2025-07-28 10:58:16,340 [wrapper] Pilot exit status: 0
[2025-07-28 12:58:16] 2025-07-28 10:58:16,369 [wrapper] pandaids: 6745064164 6745064164
[2025-07-28 12:58:16] 2025-07-28 10:58:16,553 [wrapper] cleanup supervisor_pilot 2002475 895861
[2025-07-28 12:58:16] 2025-07-28 10:58:16,558 [wrapper] Test setup, not cleaning
[2025-07-28 12:58:16] 2025-07-28 10:58:16,568 [wrapper] apfmon messages muted
[2025-07-28 12:58:16] 2025-07-28 10:58:16,588 [wrapper] ==== wrapper stdout END ====
[2025-07-28 12:58:16] 2025-07-28 10:58:16,597 [wrapper] ==== wrapper stderr END ====
[2025-07-28 12:58:16]  *** Error codes and diagnostics ***
[2025-07-28 12:58:16]     "exeErrorCode": 0,
[2025-07-28 12:58:16]     "exeErrorDiag": "",
[2025-07-28 12:58:16]     "pilotErrorCode": 0,
[2025-07-28 12:58:16]     "pilotErrorDiag": "",
[2025-07-28 12:58:16]  *** Listing of results directory ***
[2025-07-28 12:58:16] total 491812
[2025-07-28 12:58:16] drwx------ 4 boinc boinc      4096 Jun 17 12:04 pilot3
[2025-07-28 12:58:16] -rw-r--r-- 1 boinc boinc    530466 Jul 26 00:55 pilot3.tar.gz
[2025-07-28 12:58:16] -rw-r--r-- 1 boinc boinc      5112 Jul 26 00:56 queuedata.json
[2025-07-28 12:58:16] -rwx------ 1 boinc boinc     36292 Jul 26 00:58 runpilot2-wrapper.sh
[2025-07-28 12:58:16] -rw-r--r-- 1 boinc boinc       100 Jul 28 07:09 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-28 12:58:16] -rwxr-xr-x 1 boinc boinc      7986 Jul 28 07:09 run_atlas
[2025-07-28 12:58:16] -rw-r--r-- 1 boinc boinc       105 Jul 28 07:09 job.xml
[2025-07-28 12:58:16] -rw-r--r-- 3 boinc boinc 144144381 Jul 28 07:09 EVNT.45743347._001582.pool.root.1
[2025-07-28 12:58:16] -rw-r--r-- 3 boinc boinc 144144381 Jul 28 07:09 ATLAS.root_0
[2025-07-28 12:58:16] -rw-r--r-- 2 boinc boinc     15095 Jul 28 07:09 start_atlas.sh
[2025-07-28 12:58:16] drwxrwx--x 2 boinc boinc      4096 Jul 28 07:09 shared
[2025-07-28 12:58:16] -rw-r--r-- 2 boinc boinc    542900 Jul 28 07:09 input.tar.gz
[2025-07-28 12:58:16] -rw-r--r-- 1 boinc boinc         0 Jul 28 07:09 boinc_lockfile
[2025-07-28 12:58:16] -rw-r--r-- 1 boinc boinc      6692 Jul 28 09:45 init_data.xml
[2025-07-28 12:58:16] -rw-r--r-- 1 boinc boinc      2563 Jul 28 09:45 pandaJob.out
[2025-07-28 12:58:16] -rw------- 1 boinc boinc    978452 Jul 28 09:45 agis_schedconf.cvmfs.json
[2025-07-28 12:58:16] -rw------- 1 boinc boinc 208712087 Jul 28 12:56 HITS.45743349._028352.pool.root.1
[2025-07-28 12:58:16] -rw-r--r-- 1 boinc boinc       531 Jul 28 12:56 boinc_task_state.xml
[2025-07-28 12:58:16] -rw------- 1 boinc boinc      1031 Jul 28 12:57 memory_monitor_summary.json
[2025-07-28 12:58:16] -rw------- 1 boinc boinc        97 Jul 28 12:57 pilot_heartbeat.json
[2025-07-28 12:58:16] -rw------- 1 boinc boinc   1593052 Jul 28 12:57 agis_ddmendpoints.agis.ALL.json
[2025-07-28 12:58:16] -rw------- 1 boinc boinc    308218 Jul 28 12:57 log.45743349._028352.job.log.tgz.1
[2025-07-28 12:58:16] -rw------- 1 boinc boinc      7788 Jul 28 12:57 heartbeat.json
[2025-07-28 12:58:16] -rw-r--r-- 1 boinc boinc      8192 Jul 28 12:57 boinc_mmap_file
[2025-07-28 12:58:16] -rw-r--r-- 1 boinc boinc        28 Jul 28 12:57 wrapper_checkpoint.txt
[2025-07-28 12:58:16] -rw------- 1 boinc boinc       822 Jul 28 12:58 pilotlog.txt
[2025-07-28 12:58:16] -rw------- 1 boinc boinc   1058805 Jul 28 12:58 log.45743349._028352.job.log.1
[2025-07-28 12:58:16] -rw------- 1 boinc boinc       357 Jul 28 12:58 output.list
[2025-07-28 12:58:16] -rw-r--r-- 1 boinc boinc       620 Jul 28 12:58 runtime_log
[2025-07-28 12:58:16] -rw------- 1 boinc boinc   1382400 Jul 28 12:58 result.tar.gz
[2025-07-28 12:58:16] -rw-r--r-- 1 boinc boinc      9104 Jul 28 12:58 runtime_log.err
[2025-07-28 12:58:16] -rw------- 1 boinc boinc       790 Jul 28 12:58 gySNDmJYgz7n9Rq4apOajLDm4fhM0noT9bVof3QYDm6jzKDmNVVgAo.diag
[2025-07-28 12:58:16] -rw-r--r-- 1 boinc boinc     22599 Jul 28 12:58 stderr.txt
[2025-07-28 12:58:16] HITS file was successfully produced:
[2025-07-28 12:58:16] -rw------- 1 boinc boinc 208712087 Jul 28 12:56 shared/HITS.pool.root.1
[2025-07-28 12:58:16]  *** Contents of shared directory: ***
[2025-07-28 12:58:16] total 346500
[2025-07-28 12:58:16] -rw-r--r-- 3 boinc boinc 144144381 Jul 28 07:09 ATLAS.root_0
[2025-07-28 12:58:16] -rw-r--r-- 2 boinc boinc     15095 Jul 28 07:09 start_atlas.sh
[2025-07-28 12:58:16] -rw-r--r-- 2 boinc boinc    542900 Jul 28 07:09 input.tar.gz
[2025-07-28 12:58:16] -rw------- 1 boinc boinc 208712087 Jul 28 12:56 HITS.pool.root.1
[2025-07-28 12:58:16] -rw------- 1 boinc boinc   1382400 Jul 28 12:58 result.tar.gz
12:58:17 (891453): run_atlas exited; CPU time 44016.861008
12:58:17 (891453): called boinc_finish(0)

</stderr_txt>
]]>

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