Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
21:49:53 (1778259): wrapper (7.7.26015): starting
21:49:53 (1778259): wrapper: running run_atlas (--nthreads 8)
[2025-07-25 21:49:53] Arguments: --nthreads 8
[2025-07-25 21:49:53] Threads: 8
[2025-07-25 21:49:53] Checking for CVMFS
[2025-07-25 21:49:53] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-25 21:49:53] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-25 21:49:53] Running cvmfs_config stat atlas.cern.ch
[2025-07-25 21:49:53] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-25 21:49:53] 2.11.3.0 22580 477007 223704 148764 1 835 40702672 45568000 10895 130560 0 2476573059 99.755 2012073727 19550 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.164:3129 1
[2025-07-25 21:49:53] CVMFS is ok
[2025-07-25 21:49:53] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-25 21:49:53] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-25 21:49:53] Further information can be found at the LHC@home message board.
[2025-07-25 21:49:53] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-25 21:49:53] Checking for apptainer binary...
[2025-07-25 21:49:53] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-25 21:49:53] Running /usr/bin/apptainer --version
[2025-07-25 21:49:53] apptainer version 1.3.3-1.el9
[2025-07-25 21:49:53] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-25 21:49:54] WARNING: Environment variable TMPDIR already has value [/home/boinc/slots/0/.apptainertmp], will not forward new value [/home/boinc] from parent process environment wns0021.triumf.lcg
[2025-07-25 21:49:54] apptainer works
[2025-07-25 21:49:54] Set ATHENA_PROC_NUMBER=8
[2025-07-25 21:49:54] Set ATHENA_CORE_NUMBER=8
[2025-07-25 21:49:54] Starting ATLAS job with PandaID=6745093367
[2025-07-25 21:49:54] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-25 21:54:59]  *** The last 200 lines of the pilot log: ***
[2025-07-25 21:54:59] 2025-07-26 04:54:24,948 | INFO     | extracted standard memory fields from prmon json
[2025-07-25 21:54:59] 2025-07-26 04:54:24,948 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-25 21:54:59] 2025-07-26 04:54:24,949 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-25 21:54:59] 2025-07-26 04:54:24,949 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-25 21:54:59] 2025-07-26 04:54:24,950 | WARNING  | wrong length of table data, x=[1753505469.0], y=[1832.0] (must be same and length>=4)
[2025-07-25 21:54:59] 2025-07-26 04:54:24,950 | INFO     | could have reported an average CPU frequency of 2095 MHz (4 samples)
[2025-07-25 21:54:59] 2025-07-26 04:54:24,950 | INFO     | ..............................
[2025-07-25 21:54:59] 2025-07-26 04:54:24,950 | INFO     | . Timing measurements:
[2025-07-25 21:54:59] 2025-07-26 04:54:24,950 | INFO     | . get job = 0 s
[2025-07-25 21:54:59] 2025-07-26 04:54:24,950 | INFO     | . initial setup = 4 s
[2025-07-25 21:54:59] 2025-07-26 04:54:24,950 | INFO     | . payload setup = 18 s
[2025-07-25 21:54:59] 2025-07-26 04:54:24,950 | INFO     | . stage-in = 0 s
[2025-07-25 21:54:59] 2025-07-26 04:54:24,950 | INFO     | . payload execution = 55 s
[2025-07-25 21:54:59] 2025-07-26 04:54:24,950 | INFO     | . stage-out = 0 s
[2025-07-25 21:54:59] 2025-07-26 04:54:24,950 | INFO     | . log creation = 0 s
[2025-07-25 21:54:59] 2025-07-26 04:54:24,951 | INFO     | ..............................
[2025-07-25 21:54:59] 2025-07-26 04:54:24,951 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-07-25 21:54:59] 2025-07-26 04:54:24,951 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6745093367/pilotlog.txt
[2025-07-25 21:54:59] 2025-07-26 04:54:24,998 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-07-25 21:54:59] - Log from pilotlog.txt -
[2025-07-25 21:54:59] 2025-07-26 04:54:24,922 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6745093367/memory_monitor_summary.json (trf name=prmon)
[2025-07-25 21:54:59] 2025-07-26 04:54:24,923 | INFO     | extracted standard info from prmon json
[2025-07-25 21:54:59] 2025-07-26 04:54:24,948 | INFO     | extracted standard memory fields from prmon json
[2025-07-25 21:54:59] 2025-07-26 04:54:24,948 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-25 21:54:59] 2025-07-26 04:54:24,949 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-25 21:54:59] 2025-07-26 04:54:24,949 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-25 21:54:59] 2025-07-26 04:54:24,950 | WARNING  | wrong length of table data, x=[1753505469.0], y=[1832.0] (must be same and length>=4)
[2025-07-25 21:54:59] 2025-07-26 04:54:24,950 | INFO     | could have reported an average CPU frequency of 2095 MHz (4 samples)
[2025-07-25 21:54:59] 2025-07-26 04:54:24,950 | INFO     | ..............................
[2025-07-25 21:54:59] 2025-07-26 04:54:24,950 | INFO     | . Timing measurements:
[2025-07-25 21:54:59] 2025-07-26 04:54:24,950 | INFO     | . get job = 0 s
[2025-07-25 21:54:59] 2025-07-26 04:54:24,950 | INFO     | . initial setup = 4 s
[2025-07-25 21:54:59] 2025-07-26 04:54:24,950 | INFO     | . payload setup = 18 s
[2025-07-25 21:54:59] 2025-07-26 04:54:24,950 | INFO     | . stage-in = 0 s
[2025-07-25 21:54:59] 2025-07-26 04:54:24,950 | INFO     | . payload execution = 55 s
[2025-07-25 21:54:59] 2025-07-26 04:54:24,950 | INFO     | . stage-out = 0 s
[2025-07-25 21:54:59] 2025-07-26 04:54:24,950 | INFO     | . log creation = 0 s
[2025-07-25 21:54:59] 2025-07-26 04:54:24,951 | INFO     | ..............................
[2025-07-25 21:54:59] 2025-07-26 04:54:24,951 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-07-25 21:54:59] 2025-07-26 04:54:24,951 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6745093367/pilotlog.txt
[2025-07-25 21:54:59] 2025-07-26 04:54:24,998 | WARNING  | 
[2025-07-25 21:54:59] [begin log extracts]
[2025-07-25 21:54:59] - Log from pilotlog.txt -
[2025-07-25 21:54:59] 2025-07-26 04:54:24,922 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6745093367/memory_monitor_summary.json (trf name=prmon)
[2025-07-25 21:54:59] 2025-07-26 04:54:24,923 | INFO     | extracted standard info from prmon json
[2025-07-25 21:54:59] 2025-07-26 04:54:24,948 | INFO     | extracted standard memory fields from prmon json
[2025-07-25 21:54:59] 2025-07-26 04:54:24,948 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-25 21:54:59] 2025-07-26 04:54:24,949 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-25 21:54:59] 2025-07-26 04:54:24,949 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-25 21:54:59] 2025-07-26 04:54:24,950 | WARNING  | wrong length of table data, x=[1753505469.0], y=[1832.0] (must be same and length>=4)
[2025-07-25 21:54:59] 2025-07-26 04:54:24,950 | INFO     | could have reported an average CPU frequency of 2095 MHz (4 samples)
[2025-07-25 21:54:59] 2025-07-26 04:54:24,950 | INFO     | ..............................
[2025-07-25 21:54:59] 2025-07-26 04:54:24,950 | INFO     | . Timing measurements:
[2025-07-25 21:54:59] 2025-07-26 04:54:24,950 | INFO     | . get job = 0 s
[2025-07-25 21:54:59] 2025-07-26 04:54:24,950 | INFO     | . initial setup = 4 s
[2025-07-25 21:54:59] 2025-07-26 04:54:24,950 | INFO     | . payload setup = 18 s
[2025-07-25 21:54:59] 2025-07-26 04:54:24,950 | INFO     | . stage-in = 0 s
[2025-07-25 21:54:59] 2025-07-26 04:54:24,950 | INFO     | . payload execution = 55 s
[2025-07-25 21:54:59] 2025-07-26 04:54:24,950 | INFO     | . stage-out = 0 s
[2025-07-25 21:54:59] 2025-07-26 04:54:24,950 | INFO     | . log creation = 0 s
[2025-07-25 21:54:59] 2025-07-26 04:54:24,951 | INFO     | ..............................
[2025-07-25 21:54:59] 2025-07-26 04:54:24,951 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-07-25 21:54:59] 2025-07-26 04:54:24,951 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6745093367/pilotlog.txt
[2025-07-25 21:54:59] [end log extracts]
[2025-07-25 21:54:59] 2025-07-26 04:54:24,999 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-07-25 21:54:59] 2025-07-26 04:54:25,000 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-07-25 21:54:59] 2025-07-26 04:54:25,077 | INFO     | 
[2025-07-25 21:54:59] 2025-07-26 04:54:25,077 | INFO     | job summary report
[2025-07-25 21:54:59] 2025-07-26 04:54:25,078 | INFO     | --------------------------------------------------
[2025-07-25 21:54:59] 2025-07-26 04:54:25,078 | INFO     | PanDA job id: 6745093367
[2025-07-25 21:54:59] 2025-07-26 04:54:25,078 | INFO     | task id: 45743349
[2025-07-25 21:54:59] 2025-07-26 04:54:25,078 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-07-25 21:51:49,026 CRITICAL Transform executor raised TransformValidationExceptio
[2025-07-25 21:54:59] 2025-07-26 04:54:25,078 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-25 21:54:59] 2025-07-26 04:54:25,078 | INFO     | pilot state: failed 
[2025-07-25 21:54:59] 2025-07-26 04:54:25,078 | INFO     | transexitcode: 65
[2025-07-25 21:54:59] 2025-07-26 04:54:25,079 | INFO     | exeerrorcode: 65
[2025-07-25 21:54:59] 2025-07-26 04:54:25,079 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2025-07-25 21:54:59] 2025-07-26 04:54:25,079 | INFO     | exitcode: 65
[2025-07-25 21:54:59] 2025-07-26 04:54:25,079 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2025-07-25 21:54:59] 2025-07-26 04:54:25,079 | INFO     | cpuconsumptiontime: 18 s
[2025-07-25 21:54:59] 2025-07-26 04:54:25,079 | INFO     | nevents: 0
[2025-07-25 21:54:59] 2025-07-26 04:54:25,079 | INFO     | neventsw: 0
[2025-07-25 21:54:59] 2025-07-26 04:54:25,079 | INFO     | pid: 1789114
[2025-07-25 21:54:59] 2025-07-26 04:54:25,079 | INFO     | pgrp: 1789114
[2025-07-25 21:54:59] 2025-07-26 04:54:25,079 | INFO     | corecount: 8
[2025-07-25 21:54:59] 2025-07-26 04:54:25,079 | INFO     | event service: False
[2025-07-25 21:54:59] 2025-07-26 04:54:25,080 | INFO     | sizes: {0: 2397243, 1: 2397498, 9: 2397760, 12: 2397788, 78: 2421070, 79: 2425546, 222: 2425684}
[2025-07-25 21:54:59] 2025-07-26 04:54:25,080 | INFO     | --------------------------------------------------
[2025-07-25 21:54:59] 2025-07-26 04:54:25,080 | INFO     | 
[2025-07-25 21:54:59] 2025-07-26 04:54:25,080 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-07-25 21:54:59] 2025-07-26 04:54:25,096 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-25 21:54:59] 2025-07-26 04:54:25,096 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-25 21:54:59] 2025-07-26 04:54:25,096 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-25 21:54:59] 2025-07-26 04:54:25,096 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-25 21:54:59] 2025-07-26 04:54:25,096 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-25 21:54:59] 2025-07-26 04:54:25,097 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-25 21:54:59] 2025-07-26 04:54:25,097 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-25 21:54:59] 2025-07-26 04:54:25,097 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-25 21:54:59] 2025-07-26 04:54:25,097 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-25 21:54:59] 2025-07-26 04:54:25,097 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-25 21:54:59] 2025-07-26 04:54:25,097 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-25 21:54:59] 2025-07-26 04:54:25,097 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-25 21:54:59] 2025-07-26 04:54:25,097 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-25 21:54:59] 2025-07-26 04:54:25,097 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-25 21:54:59] 2025-07-26 04:54:25,097 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-25 21:54:59] 2025-07-26 04:54:25,097 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-25 21:54:59] 2025-07-26 04:54:25,097 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-25 21:54:59] 2025-07-26 04:54:25,097 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-25 21:54:59] 2025-07-26 04:54:25,097 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-25 21:54:59] 2025-07-26 04:54:25,098 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-25 21:54:59] 2025-07-26 04:54:25,098 | INFO     | job 6745093367 has completed (purged errors)
[2025-07-25 21:54:59] 2025-07-26 04:54:25,098 | INFO     | overall cleanup function is called
[2025-07-25 21:54:59] 2025-07-26 04:54:26,104 | INFO     | --- collectZombieJob: --- 10, [1789114]
[2025-07-25 21:54:59] 2025-07-26 04:54:26,104 | INFO     | zombie collector waiting for pid 1789114
[2025-07-25 21:54:59] 2025-07-26 04:54:26,105 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-25 21:54:59] 2025-07-26 04:54:26,105 | INFO     | collected zombie processes
[2025-07-25 21:54:59] 2025-07-26 04:54:26,105 | INFO     | will attempt to kill all subprocesses of pid=1789114
[2025-07-25 21:54:59] 2025-07-26 04:54:26,282 | INFO     | process IDs to be killed: [1789114] (in reverse order)
[2025-07-25 21:54:59] 2025-07-26 04:54:26,345 | WARNING  | found no corresponding commands to process id(s)
[2025-07-25 21:54:59] 2025-07-26 04:54:26,345 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-25 21:54:59] 2025-07-26 04:54:26,360 | INFO     | did not find any defunct processes belonging to 1789114
[2025-07-25 21:54:59] 2025-07-26 04:54:26,368 | INFO     | did not find any defunct processes belonging to 1789114
[2025-07-25 21:54:59] 2025-07-26 04:54:26,368 | INFO     | ready for new job
[2025-07-25 21:54:59] 2025-07-26 04:54:26,368 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-25 21:54:59] 2025-07-26 04:54:26,401 | INFO     | ***************************************
[2025-07-25 21:54:59] 2025-07-26 04:54:26,401 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-25 21:54:59] 2025-07-26 04:54:26,401 | INFO     | ***************************************
[2025-07-25 21:54:59] 2025-07-26 04:54:26,401 | INFO     | 
[2025-07-25 21:54:59] 2025-07-26 04:54:26,403 | INFO     | architecture information:
[2025-07-25 21:54:59] 2025-07-26 04:54:26,434 | INFO     | executing command: cat /etc/os-release
[2025-07-25 21:54:59] 2025-07-26 04:54:26,500 | INFO     | cat /etc/os-release:
[2025-07-25 21:54:59] NAME="CentOS Linux"
[2025-07-25 21:54:59] VERSION="7 (Core)"
[2025-07-25 21:54:59] ID="centos"
[2025-07-25 21:54:59] ID_LIKE="rhel fedora"
[2025-07-25 21:54:59] VERSION_ID="7"
[2025-07-25 21:54:59] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-25 21:54:59] ANSI_COLOR="0;31"
[2025-07-25 21:54:59] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-25 21:54:59] HOME_URL="https://www.centos.org/"
[2025-07-25 21:54:59] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-25 21:54:59] 
[2025-07-25 21:54:59] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-25 21:54:59] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-25 21:54:59] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-25 21:54:59] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-25 21:54:59] 
[2025-07-25 21:54:59] 2025-07-26 04:54:26,501 | INFO     | ***************************************
[2025-07-25 21:54:59] 2025-07-26 04:54:27,004 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-07-25 21:54:59] 2025-07-26 04:54:27,246 | INFO     | sufficient remaining disk space (1288702001152 B)
[2025-07-25 21:54:59] 2025-07-26 04:54:27,246 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-25 21:54:59] 2025-07-26 04:54:27,263 | INFO     | current server update state: UPDATING_FINAL
[2025-07-25 21:54:59] 2025-07-26 04:54:27,263 | INFO     | update_server=False
[2025-07-25 21:54:59] 2025-07-26 04:54:27,264 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-25 21:54:59] 2025-07-26 04:54:27,780 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-25 21:54:59] 2025-07-26 04:54:27,780 | INFO     | aborting loop
[2025-07-25 21:54:59] 2025-07-26 04:54:27,861 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-25 21:54:59] 2025-07-26 04:54:28,090 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-25 21:54:59] 2025-07-26 04:54:28,269 | INFO     | [job] retrieve thread has finished
[2025-07-25 21:54:59] 2025-07-26 04:54:28,290 | INFO     | all data control threads have been joined
[2025-07-25 21:54:59] 2025-07-26 04:54:28,440 | INFO     | [payload] execute_payloads thread has finished
[2025-07-25 21:54:59] 2025-07-26 04:54:28,441 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-25 21:54:59] 2025-07-26 04:54:28,546 | INFO     | [job] validate thread has finished
[2025-07-25 21:54:59] 2025-07-26 04:54:28,562 | INFO     | [payload] validate_post thread has finished
[2025-07-25 21:54:59] 2025-07-26 04:54:28,574 | INFO     | all job control threads have been joined
[2025-07-25 21:54:59] 2025-07-26 04:54:28,593 | INFO     | all payload control threads have been joined
[2025-07-25 21:54:59] 2025-07-26 04:54:28,742 | INFO     | [job] create_data_payload thread has finished
[2025-07-25 21:54:59] 2025-07-26 04:54:28,786 | INFO     | [job] job monitor thread has finished
[2025-07-25 21:54:59] 2025-07-26 04:54:28,961 | INFO     | [payload] failed_post thread has finished
[2025-07-25 21:54:59] 2025-07-26 04:54:28,980 | INFO     | [payload] validate_pre thread has finished
[2025-07-25 21:54:59] 2025-07-26 04:54:29,295 | INFO     | [data] control thread has finished
[2025-07-25 21:54:59] 2025-07-26 04:54:29,580 | INFO     | [job] control thread has finished
[2025-07-25 21:54:59] 2025-07-26 04:54:29,599 | INFO     | [payload] control thread has finished
[2025-07-25 21:54:59] 2025-07-26 04:54:29,600 | INFO     | [data] copytool_in thread has finished
[2025-07-25 21:54:59] 2025-07-26 04:54:30,090 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-25 21:54:59] 2025-07-26 04:54:30,101 | INFO     | [data] copytool_out thread has finished
[2025-07-25 21:54:59] 2025-07-26 04:54:31,096 | INFO     | [job] queue monitor thread has finished
[2025-07-25 21:54:59] 2025-07-26 04:54:31,870 | INFO     | [data] queue_monitor thread has finished
[2025-07-25 21:54:59] 2025-07-26 04:54:32,861 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139678311049024)>', '<ExcThread(monitor, started 139677990360832)>']
[2025-07-25 21:54:59] 2025-07-26 04:54:37,887 | INFO     | all workflow threads have been joined
[2025-07-25 21:54:59] 2025-07-26 04:54:37,888 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-25 21:54:59] 2025-07-26 04:54:37,888 | INFO     | traces error code: 0
[2025-07-25 21:54:59] 2025-07-26 04:54:37,888 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-25 21:54:59] 2025-07-26 04:54:58,368 | INFO     | PID=1782235 has CPU usage=1.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-25 21:54:59] 2025-07-26 04:54:58,368 | INFO     | .. there are 19 such processes running
[2025-07-25 21:54:59] 2025-07-26 04:54:58,368 | INFO     | found 0 job(s) in 20 queues
[2025-07-25 21:54:59] 2025-07-26 04:54:58,368 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-25 21:54:59] 2025-07-26 04:54:58,368 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-25 21:54:59] 2025-07-26 04:54:58,368 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-25 21:54:59] 2025-07-26 04:54:58,368 | INFO     | [monitor] control thread has ended
[2025-07-25 21:54:59] 2025-07-26 04:54:59,254 [wrapper] ==== pilot stdout END ====
[2025-07-25 21:54:59] 2025-07-26 04:54:59,256 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-25 21:54:59] 2025-07-26 04:54:59,259 [wrapper] pilotpid: 1782235
[2025-07-25 21:54:59] 2025-07-26 04:54:59,261 [wrapper] Pilot exit status: 0
[2025-07-25 21:54:59] 2025-07-26 04:54:59,271 [wrapper] pandaids: 6745093367
[2025-07-25 21:54:59] 2025-07-26 04:54:59,307 [wrapper] cleanup supervisor_pilot 1782242 1782236
[2025-07-25 21:54:59] 2025-07-26 04:54:59,310 [wrapper] Test setup, not cleaning
[2025-07-25 21:54:59] 2025-07-26 04:54:59,312 [wrapper] apfmon messages muted
[2025-07-25 21:54:59] 2025-07-26 04:54:59,337 [wrapper] ==== wrapper stdout END ====
[2025-07-25 21:54:59] 2025-07-26 04:54:59,353 [wrapper] ==== wrapper stderr END ====
[2025-07-25 21:54:59]  *** Error codes and diagnostics ***
[2025-07-25 21:54:59]     "exeErrorCode": 65,
[2025-07-25 21:54:59]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2025-07-25 21:54:59]     "pilotErrorCode": 1305,
[2025-07-25 21:54:59]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2025-07-25 21:54:59]  *** Listing of results directory ***
[2025-07-25 21:54:59] total 231176
[2025-07-25 21:54:59] -rw-r--r--. 1 boinc boinc    530466 Jul 25 18:05 pilot3.tar.gz
[2025-07-25 21:54:59] -rwx------. 1 boinc boinc     36292 Jul 25 18:55 runpilot2-wrapper.sh
[2025-07-25 21:54:59] -rw-r--r--. 1 boinc boinc      5112 Jul 25 18:55 queuedata.json
[2025-07-25 21:54:59] -rw-r--r--. 1 boinc boinc       100 Jul 25 21:49 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-25 21:54:59] -rwxr-xr-x. 1 boinc boinc      7986 Jul 25 21:49 run_atlas
[2025-07-25 21:54:59] -rw-r--r--. 1 boinc boinc       105 Jul 25 21:49 job.xml
[2025-07-25 21:54:59] -rw-r--r--. 2 boinc boinc 232641371 Jul 25 21:49 EVNT.45743347._001704.pool.root.1
[2025-07-25 21:54:59] -rw-r--r--. 1 boinc boinc      6448 Jul 25 21:49 init_data.xml
[2025-07-25 21:54:59] -rw-r--r--. 2 boinc boinc     15095 Jul 25 21:49 start_atlas.sh
[2025-07-25 21:54:59] drwxrwx--x. 2 boinc boinc      4096 Jul 25 21:49 shared
[2025-07-25 21:54:59] -rw-r--r--. 2 boinc boinc    542889 Jul 25 21:49 input.tar.gz
[2025-07-25 21:54:59] -rw-r--r--. 1 boinc boinc         0 Jul 25 21:49 boinc_lockfile
[2025-07-25 21:54:59] -rw-r--r--. 1 boinc boinc      2562 Jul 25 21:49 pandaJob.out
[2025-07-25 21:54:59] -rw-------. 1 boinc boinc    980001 Jul 25 21:50 agis_schedconf.cvmfs.json
[2025-07-25 21:54:59] -rw-------. 1 boinc boinc   1593052 Jul 25 21:50 agis_ddmendpoints.agis.ALL.json
[2025-07-25 21:54:59] drwx------. 4 boinc boinc      4096 Jul 25 21:50 pilot3
[2025-07-25 21:54:59] -rw-r--r--. 1 boinc boinc       525 Jul 25 21:51 boinc_task_state.xml
[2025-07-25 21:54:59] -rw-------. 1 boinc boinc       951 Jul 25 21:51 memory_monitor_summary.json
[2025-07-25 21:54:59] -rw-------. 1 boinc boinc     21464 Jul 25 21:52 log.45743349._030508.job.log.tgz.1
[2025-07-25 21:54:59] -rw-------. 1 boinc boinc        95 Jul 25 21:54 pilot_heartbeat.json
[2025-07-25 21:54:59] -rw-------. 1 boinc boinc      8395 Jul 25 21:54 heartbeat.json
[2025-07-25 21:54:59] -rw-r--r--. 1 boinc boinc      8192 Jul 25 21:54 boinc_mmap_file
[2025-07-25 21:54:59] -rw-------. 1 boinc boinc       823 Jul 25 21:54 pilotlog.txt
[2025-07-25 21:54:59] -rw-r--r--. 1 boinc boinc        23 Jul 25 21:54 wrapper_checkpoint.txt
[2025-07-25 21:54:59] -rw-------. 1 boinc boinc     81333 Jul 25 21:54 log.45743349._030508.job.log.1
[2025-07-25 21:54:59] -rw-------. 1 boinc boinc       188 Jul 25 21:54 output.list
[2025-07-25 21:54:59] -rw-r--r--. 1 boinc boinc       620 Jul 25 21:54 runtime_log
[2025-07-25 21:54:59] -rw-------. 1 boinc boinc    122880 Jul 25 21:54 result.tar.gz
[2025-07-25 21:54:59] -rw-r--r--. 1 boinc boinc      8648 Jul 25 21:54 runtime_log.err
[2025-07-25 21:54:59] -rw-------. 1 boinc boinc       645 Jul 25 21:54 GIfNDm4Ijz7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmP0QLDmWMt9No.diag
[2025-07-25 21:54:59] -rw-r--r--. 1 boinc boinc     21953 Jul 25 21:54 stderr.txt
[2025-07-25 21:54:59] No HITS result produced
[2025-07-25 21:54:59]  *** Contents of shared directory: ***
[2025-07-25 21:54:59] total 227864
[2025-07-25 21:54:59] -rw-r--r--. 2 boinc boinc 232641371 Jul 25 21:49 ATLAS.root_0
[2025-07-25 21:54:59] -rw-r--r--. 2 boinc boinc     15095 Jul 25 21:49 start_atlas.sh
[2025-07-25 21:54:59] -rw-r--r--. 2 boinc boinc    542889 Jul 25 21:49 input.tar.gz
[2025-07-25 21:54:59] -rw-------. 1 boinc boinc    122880 Jul 25 21:54 result.tar.gz
21:55:00 (1778259): run_atlas exited; CPU time 26.407087
21:55:00 (1778259): called boinc_finish(0)

</stderr_txt>
]]>

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