Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
17:54:54 (31487): wrapper (7.7.26015): starting
17:54:54 (31487): wrapper: running run_atlas (--nthreads 8)
[2025-07-26 17:54:54] Arguments: --nthreads 8
[2025-07-26 17:54:54] Threads: 8
[2025-07-26 17:54:54] Checking for CVMFS
[2025-07-26 17:54:54] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-26 17:54:55] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-26 17:54:55] Running cvmfs_config stat atlas.cern.ch
[2025-07-26 17:54:55] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-26 17:54:55] 2.11.2.0 24816 108461 137228 148782 0 156 20255187 25165824 4287 130560 0 87427442 99.872 55024723 3845 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-07-26 17:54:55] CVMFS is ok
[2025-07-26 17:54:55] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-26 17:54:55] Checking for apptainer binary...
[2025-07-26 17:54:55] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-26 17:54:55] Running /usr/bin/apptainer --version
[2025-07-26 17:54:55] apptainer version 1.3.2-1.el7
[2025-07-26 17:54:55] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-26 17:54:57] cg-vwn494.simple-grid.lan
[2025-07-26 17:54:57] apptainer works
[2025-07-26 17:54:57] Set ATHENA_PROC_NUMBER=8
[2025-07-26 17:54:57] Set ATHENA_CORE_NUMBER=8
[2025-07-26 17:54:57] Starting ATLAS job with PandaID=6745065490
[2025-07-26 17:54:57] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-27 00:06:13]  *** The last 200 lines of the pilot log: ***
[2025-07-27 00:06:13] 2025-07-26 20:07:28,347 | INFO     | sum of square deviations: 4616114457.5
[2025-07-27 00:06:13] 2025-07-26 20:07:28,349 | INFO     | sum of deviations: 17135137899.999994
[2025-07-27 00:06:13] 2025-07-26 20:07:28,350 | INFO     | mean x: 1753552858.5
[2025-07-27 00:06:13] 2025-07-26 20:07:28,350 | INFO     | mean y: 2485661.18699187
[2025-07-27 00:06:13] 2025-07-26 20:07:28,350 | INFO     | -- intersect: -6506748527.431841
[2025-07-27 00:06:13] 2025-07-26 20:07:28,350 | INFO     | intersect: -6506748527.431841
[2025-07-27 00:06:13] 2025-07-26 20:07:28,350 | INFO     | chi2: 2.489647936514534
[2025-07-27 00:06:13] 2025-07-26 20:07:28,351 | INFO     | sum of square deviations: 4340323240.0
[2025-07-27 00:06:13] 2025-07-26 20:07:28,353 | INFO     | sum of deviations: 32801824264.000004
[2025-07-27 00:06:13] 2025-07-26 20:07:28,353 | INFO     | mean x: 1753552706.0
[2025-07-27 00:06:13] 2025-07-26 20:07:28,353 | INFO     | mean y: 2494175.663900415
[2025-07-27 00:06:13] 2025-07-26 20:07:28,353 | INFO     | -- intersect: -13249912274.108643
[2025-07-27 00:06:13] 2025-07-26 20:07:28,353 | INFO     | intersect: -13249912274.108643
[2025-07-27 00:06:13] 2025-07-26 20:07:28,354 | INFO     | chi2: 1.7227307152361835
[2025-07-27 00:06:13] 2025-07-26 20:07:28,354 | INFO     | current chi2=1.7227307152361835 (change=30.8042438463015 %)
[2025-07-27 00:06:13] 2025-07-26 20:07:28,358 | INFO     | sum of square deviations: 4075741535.0
[2025-07-27 00:06:13] 2025-07-26 20:07:28,360 | INFO     | sum of deviations: 31925285373.999996
[2025-07-27 00:06:13] 2025-07-26 20:07:28,360 | INFO     | mean x: 1753552553.5
[2025-07-27 00:06:13] 2025-07-26 20:07:28,360 | INFO     | mean y: 2493670.372881356
[2025-07-27 00:06:13] 2025-07-26 20:07:28,360 | INFO     | -- intersect: -13733084311.706863
[2025-07-27 00:06:13] 2025-07-26 20:07:28,360 | INFO     | intersect: -13733084311.706863
[2025-07-27 00:06:13] 2025-07-26 20:07:28,361 | INFO     | chi2: 1.723684637359595
[2025-07-27 00:06:13] 2025-07-26 20:07:28,361 | INFO     | current chi2=1.723684637359595 (change=-0.05537267751569804 %)
[2025-07-27 00:06:13] 2025-07-26 20:07:28,361 | INFO     | right removable region: 235
[2025-07-27 00:06:13] 2025-07-26 20:07:28,361 | INFO     | sum of square deviations: 4340323240.0
[2025-07-27 00:06:13] 2025-07-26 20:07:28,363 | INFO     | sum of deviations: -25203951452.0
[2025-07-27 00:06:13] 2025-07-26 20:07:28,364 | INFO     | mean x: 1753553011.0
[2025-07-27 00:06:13] 2025-07-26 20:07:28,364 | INFO     | mean y: 2508883.676348548
[2025-07-27 00:06:13] 2025-07-26 20:07:28,364 | INFO     | -- intersect: 10185267750.675484
[2025-07-27 00:06:13] 2025-07-26 20:07:28,364 | INFO     | intersect: 10185267750.675484
[2025-07-27 00:06:13] 2025-07-26 20:07:28,364 | INFO     | chi2: 0.8757329570486653
[2025-07-27 00:06:13] 2025-07-26 20:07:28,364 | INFO     | current chi2=0.8757329570486653 (change=64.82502830200654 %)
[2025-07-27 00:06:13] 2025-07-26 20:07:28,365 | INFO     | sum of square deviations: 4075741535.0
[2025-07-27 00:06:13] 2025-07-26 20:07:28,367 | INFO     | sum of deviations: -23138921593.5
[2025-07-27 00:06:13] 2025-07-26 20:07:28,367 | INFO     | mean x: 1753553163.5
[2025-07-27 00:06:13] 2025-07-26 20:07:28,367 | INFO     | mean y: 2507663.3262711866
[2025-07-27 00:06:13] 2025-07-26 20:07:28,367 | INFO     | -- intersect: 9957832065.480831
[2025-07-27 00:06:13] 2025-07-26 20:07:28,367 | INFO     | intersect: 9957832065.480831
[2025-07-27 00:06:13] 2025-07-26 20:07:28,368 | INFO     | chi2: 0.8628177058565342
[2025-07-27 00:06:13] 2025-07-26 20:07:28,368 | INFO     | current chi2=0.8628177058565342 (change=1.4747933246291418 %)
[2025-07-27 00:06:13] 2025-07-26 20:07:28,368 | INFO     | left removable region: 20
[2025-07-27 00:06:13] 2025-07-26 20:07:28,368 | INFO     | sum of square deviations: 3081657780.0
[2025-07-27 00:06:13] 2025-07-26 20:07:28,373 | INFO     | sum of deviations: 6201530108.0
[2025-07-27 00:06:13] 2025-07-26 20:07:28,373 | INFO     | mean x: 1753553133.0
[2025-07-27 00:06:13] 2025-07-26 20:07:28,374 | INFO     | mean y: 2507851.6
[2025-07-27 00:06:13] 2025-07-26 20:07:28,374 | INFO     | -- intersect: -3526343606.486702
[2025-07-27 00:06:13] 2025-07-26 20:07:28,374 | INFO     | intersect: -3526343606.486702
[2025-07-27 00:06:13] 2025-07-26 20:07:28,374 | INFO     | chi2: 0.0010384049452420061
[2025-07-27 00:06:13] 2025-07-26 20:07:28,374 | INFO     | -- intersect: -3526343606.486702
[2025-07-27 00:06:13] 2025-07-26 20:07:28,374 | INFO     | current memory leak: 2.01 B/s (using 215 data points, chi2=0.00)
[2025-07-27 00:06:13] 2025-07-26 20:07:28,375 | INFO     | could have reported an average CPU frequency of 2249 MHz (11 samples)
[2025-07-27 00:06:13] 2025-07-26 20:07:28,375 | INFO     | ..............................
[2025-07-27 00:06:13] 2025-07-26 20:07:28,376 | INFO     | . Timing measurements:
[2025-07-27 00:06:13] 2025-07-26 20:07:28,376 | INFO     | . get job = 0 s
[2025-07-27 00:06:13] 2025-07-26 20:07:28,376 | INFO     | . initial setup = 1 s
[2025-07-27 00:06:13] 2025-07-26 20:07:28,376 | INFO     | . payload setup = 15 s
[2025-07-27 00:06:13] 2025-07-26 20:07:28,376 | INFO     | . stage-in = 0 s
[2025-07-27 00:06:13] 2025-07-26 20:07:28,376 | INFO     | . payload execution = 14982 s
[2025-07-27 00:06:13] 2025-07-26 20:07:28,376 | INFO     | . stage-out = 3 s
[2025-07-27 00:06:13] 2025-07-26 20:07:28,376 | INFO     | . log creation = 1 s
[2025-07-27 00:06:13] 2025-07-26 20:07:28,376 | INFO     | ..............................
[2025-07-27 00:06:13] 2025-07-26 20:07:28,542 | INFO     | 
[2025-07-27 00:06:13] 2025-07-26 20:07:28,542 | INFO     | job summary report
[2025-07-27 00:06:13] 2025-07-26 20:07:28,543 | INFO     | --------------------------------------------------
[2025-07-27 00:06:13] 2025-07-26 20:07:28,543 | INFO     | PanDA job id: 6745065490
[2025-07-27 00:06:13] 2025-07-26 20:07:28,543 | INFO     | task id: 45743349
[2025-07-27 00:06:13] 2025-07-26 20:07:28,543 | INFO     | errors: (none)
[2025-07-27 00:06:13] 2025-07-26 20:07:28,543 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-27 00:06:13] 2025-07-26 20:07:28,543 | INFO     | pilot state: finished 
[2025-07-27 00:06:13] 2025-07-26 20:07:28,543 | INFO     | transexitcode: 0
[2025-07-27 00:06:13] 2025-07-26 20:07:28,543 | INFO     | exeerrorcode: 0
[2025-07-27 00:06:13] 2025-07-26 20:07:28,543 | INFO     | exeerrordiag: 
[2025-07-27 00:06:13] 2025-07-26 20:07:28,543 | INFO     | exitcode: 0
[2025-07-27 00:06:13] 2025-07-26 20:07:28,543 | INFO     | exitmsg: OK
[2025-07-27 00:06:13] 2025-07-26 20:07:28,543 | INFO     | cpuconsumptiontime: 58128 s
[2025-07-27 00:06:13] 2025-07-26 20:07:28,544 | INFO     | nevents: 400
[2025-07-27 00:06:13] 2025-07-26 20:07:28,544 | INFO     | neventsw: 0
[2025-07-27 00:06:13] 2025-07-26 20:07:28,544 | INFO     | pid: 9680
[2025-07-27 00:06:13] 2025-07-26 20:07:28,544 | INFO     | pgrp: 9680
[2025-07-27 00:06:13] 2025-07-26 20:07:28,544 | INFO     | corecount: 8
[2025-07-27 00:06:13] 2025-07-26 20:07:28,544 | INFO     | event service: False
[2025-07-27 00:06:13] 2025-07-26 20:07:28,544 | INFO     | sizes: {0: 2397304, 1: 2397503, 10: 2397765, 12: 2397793, 15001: 2428294, 15002: 2428293, 15005: 2437531, 15107: 2437669}
[2025-07-27 00:06:13] 2025-07-26 20:07:28,544 | INFO     | --------------------------------------------------
[2025-07-27 00:06:13] 2025-07-26 20:07:28,544 | INFO     | 
[2025-07-27 00:06:13] 2025-07-26 20:07:28,544 | INFO     | executing command: ls -lF /var/lib/boinc/slots/4
[2025-07-27 00:06:13] 2025-07-26 20:07:28,928 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-27 00:06:13] 2025-07-26 20:07:28,928 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-27 00:06:13] 2025-07-26 20:07:28,928 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-27 00:06:13] 2025-07-26 20:07:28,928 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-27 00:06:13] 2025-07-26 20:07:28,928 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-27 00:06:13] 2025-07-26 20:07:28,928 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-27 00:06:13] 2025-07-26 20:07:28,928 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-27 00:06:13] 2025-07-26 20:07:28,929 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-27 00:06:13] 2025-07-26 20:07:28,929 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-27 00:06:13] 2025-07-26 20:07:28,929 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-27 00:06:13] 2025-07-26 20:07:28,929 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-27 00:06:13] 2025-07-26 20:07:28,929 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-27 00:06:13] 2025-07-26 20:07:28,929 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-27 00:06:13] 2025-07-26 20:07:28,929 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-27 00:06:13] 2025-07-26 20:07:28,929 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-27 00:06:13] 2025-07-26 20:07:28,929 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-27 00:06:13] 2025-07-26 20:07:28,929 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-27 00:06:13] 2025-07-26 20:07:28,929 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-27 00:06:13] 2025-07-26 20:07:28,930 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-27 00:06:13] 2025-07-26 20:07:28,930 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-27 00:06:13] 2025-07-26 20:07:28,930 | INFO     | job 6745065490 has completed (purged errors)
[2025-07-27 00:06:13] 2025-07-26 20:07:28,930 | INFO     | overall cleanup function is called
[2025-07-27 00:06:13] 2025-07-26 20:07:29,938 | INFO     | --- collectZombieJob: --- 10, [9680]
[2025-07-27 00:06:13] 2025-07-26 20:07:29,939 | INFO     | zombie collector waiting for pid 9680
[2025-07-27 00:06:13] 2025-07-26 20:07:29,939 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-27 00:06:13] 2025-07-26 20:07:29,939 | INFO     | collected zombie processes
[2025-07-27 00:06:13] 2025-07-26 20:07:29,939 | INFO     | will attempt to kill all subprocesses of pid=9680
[2025-07-27 00:06:13] 2025-07-26 20:07:30,044 | INFO     | process IDs to be killed: [9680] (in reverse order)
[2025-07-27 00:06:13] 2025-07-26 20:07:30,816 | WARNING  | found no corresponding commands to process id(s)
[2025-07-27 00:06:13] 2025-07-26 20:07:30,816 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-27 00:06:13] 2025-07-26 20:07:30,819 | INFO     | did not find any defunct processes belonging to 9680
[2025-07-27 00:06:13] 2025-07-26 20:07:30,822 | INFO     | did not find any defunct processes belonging to 9680
[2025-07-27 00:06:13] 2025-07-26 20:07:30,823 | INFO     | ready for new job
[2025-07-27 00:06:13] 2025-07-26 20:07:30,823 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-27 00:06:13] 2025-07-26 20:07:30,825 | INFO     | ***************************************
[2025-07-27 00:06:13] 2025-07-26 20:07:30,825 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-27 00:06:13] 2025-07-26 20:07:30,825 | INFO     | ***************************************
[2025-07-27 00:06:13] 2025-07-26 20:07:30,825 | INFO     | 
[2025-07-27 00:06:13] 2025-07-26 20:07:30,826 | INFO     | pilot is running in a VM
[2025-07-27 00:06:13] 2025-07-26 20:07:30,826 | INFO     | architecture information:
[2025-07-27 00:06:13] 2025-07-26 20:07:30,842 | INFO     | executing command: cat /etc/os-release
[2025-07-27 00:06:13] 2025-07-26 20:07:31,105 | INFO     | cat /etc/os-release:
[2025-07-27 00:06:13] NAME="CentOS Linux"
[2025-07-27 00:06:13] VERSION="7 (Core)"
[2025-07-27 00:06:13] ID="centos"
[2025-07-27 00:06:13] ID_LIKE="rhel fedora"
[2025-07-27 00:06:13] VERSION_ID="7"
[2025-07-27 00:06:13] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-27 00:06:13] ANSI_COLOR="0;31"
[2025-07-27 00:06:13] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-27 00:06:13] HOME_URL="https://www.centos.org/"
[2025-07-27 00:06:13] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-27 00:06:13] 
[2025-07-27 00:06:13] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-27 00:06:13] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-27 00:06:13] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-27 00:06:13] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-27 00:06:13] 
[2025-07-27 00:06:13] 2025-07-26 20:07:31,105 | INFO     | ***************************************
[2025-07-27 00:06:13] 2025-07-26 20:07:31,608 | INFO     | executing command: df -mP /var/lib/boinc/slots/4
[2025-07-27 00:06:13] 2025-07-26 20:07:31,926 | INFO     | sufficient remaining disk space (497262002176 B)
[2025-07-27 00:06:13] 2025-07-26 20:07:31,927 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-27 00:06:13] 2025-07-26 20:07:31,927 | INFO     | current server update state: UPDATING_FINAL
[2025-07-27 00:06:13] 2025-07-26 20:07:31,927 | INFO     | update_server=False
[2025-07-27 00:06:13] 2025-07-26 20:07:31,927 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-27 00:06:13] 2025-07-26 20:07:31,927 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-07-27 00:06:13] 2025-07-26 20:07:31,928 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-07-27 00:06:13] 2025-07-26 20:07:31,928 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-27 00:06:13] 2025-07-26 20:07:31,928 | INFO     | will abort loop
[2025-07-27 00:06:13] 2025-07-26 20:07:31,957 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-27 00:06:13] 2025-07-26 20:07:32,341 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-27 00:06:13] 2025-07-26 20:07:32,352 | INFO     | all data control threads have been joined
[2025-07-27 00:06:13] 2025-07-26 20:07:32,788 | INFO     | all payload control threads have been joined
[2025-07-27 00:06:13] 2025-07-26 20:07:32,932 | INFO     | [job] retrieve thread has finished
[2025-07-27 00:06:13] 2025-07-26 20:07:32,934 | INFO     | [job] job monitor thread has finished
[2025-07-27 00:06:13] 2025-07-26 20:07:33,239 | INFO     | [payload] validate_pre thread has finished
[2025-07-27 00:06:13] 2025-07-26 20:07:33,272 | INFO     | [payload] validate_post thread has finished
[2025-07-27 00:06:13] 2025-07-26 20:07:33,358 | INFO     | [data] control thread has finished
[2025-07-27 00:06:13] 2025-07-26 20:07:33,372 | INFO     | all job control threads have been joined
[2025-07-27 00:06:13] 2025-07-26 20:07:33,548 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-27 00:06:13] 2025-07-26 20:07:33,706 | INFO     | [payload] execute_payloads thread has finished
[2025-07-27 00:06:13] 2025-07-26 20:07:33,786 | INFO     | [payload] failed_post thread has finished
[2025-07-27 00:06:13] 2025-07-26 20:07:33,794 | INFO     | [payload] control thread has finished
[2025-07-27 00:06:13] 2025-07-26 20:07:33,957 | INFO     | [job] validate thread has finished
[2025-07-27 00:06:13] 2025-07-26 20:07:34,050 | INFO     | [data] copytool_in thread has finished
[2025-07-27 00:06:13] 2025-07-26 20:07:34,236 | INFO     | [job] create_data_payload thread has finished
[2025-07-27 00:06:13] 2025-07-26 20:07:34,349 | INFO     | [data] copytool_out thread has finished
[2025-07-27 00:06:13] 2025-07-26 20:07:34,378 | INFO     | [job] control thread has finished
[2025-07-27 00:06:13] 2025-07-26 20:07:34,554 | INFO     | [job] queue monitor thread has finished
[2025-07-27 00:06:13] 2025-07-26 20:07:35,966 | INFO     | [data] queue_monitor thread has finished
[2025-07-27 00:06:13] 2025-07-26 20:07:42,900 | INFO     | job.realtimelogging is not enabled
[2025-07-27 00:06:13] 2025-07-26 20:07:43,907 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-27 00:06:13] 2025-07-26 20:07:44,596 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140105837438784)>', '<ExcThread(monitor, started 140105188636416)>']
[2025-07-27 00:06:13] 2025-07-26 20:07:49,622 | INFO     | all workflow threads have been joined
[2025-07-27 00:06:13] 2025-07-26 20:07:49,622 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-27 00:06:13] 2025-07-26 20:07:49,623 | INFO     | traces error code: 0
[2025-07-27 00:06:13] 2025-07-26 20:07:49,623 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-27 00:06:13] 2025-07-26 20:08:00,599 | INFO     | PID=3137 has CPU usage=1.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-07-27 00:06:13] 2025-07-26 20:08:00,599 | INFO     | .. there are 9 such processes running
[2025-07-27 00:06:13] 2025-07-26 20:08:00,599 | INFO     | found 0 job(s) in 20 queues
[2025-07-27 00:06:13] 2025-07-26 20:08:00,600 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-27 00:06:13] 2025-07-26 20:08:00,600 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-27 00:06:13] 2025-07-26 20:08:00,600 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-27 00:06:13] 2025-07-26 20:08:00,600 | CRITICAL | thread 'MainThread' is not alive
[2025-07-27 00:06:13] 2025-07-26 20:08:00,600 | INFO     | [monitor] control thread has ended
[2025-07-27 00:06:13] 2025-07-26 20:08:00,966 [wrapper] ==== pilot stdout END ====
[2025-07-27 00:06:13] 2025-07-26 20:08:01,046 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-27 00:06:13] 2025-07-26 20:08:01,167 [wrapper] pilotpid: 3137
[2025-07-27 00:06:13] 2025-07-26 20:08:01,267 [wrapper] Pilot exit status: 0
[2025-07-27 00:06:13] 2025-07-26 20:08:01,800 [wrapper] pandaids: 6745065490
[2025-07-27 00:06:13] 2025-07-26 20:08:02,436 [wrapper] cleanup supervisor_pilot 19367 3138
[2025-07-27 00:06:13] 2025-07-26 20:08:02,448 [wrapper] Test setup, not cleaning
[2025-07-27 00:06:13] 2025-07-26 20:08:02,451 [wrapper] apfmon messages muted
[2025-07-27 00:06:13] 2025-07-26 20:08:02,454 [wrapper] ==== wrapper stdout END ====
[2025-07-27 00:06:13] 2025-07-26 20:08:02,457 [wrapper] ==== wrapper stderr END ====
[2025-07-27 00:06:13]  *** Error codes and diagnostics ***
[2025-07-27 00:06:13]     "exeErrorCode": 0,
[2025-07-27 00:06:13]     "exeErrorDiag": "",
[2025-07-27 00:06:13]     "pilotErrorCode": 0,
[2025-07-27 00:06:13]     "pilotErrorDiag": "",
[2025-07-27 00:06:13]  *** Listing of results directory ***
[2025-07-27 00:06:13] total 352800
[2025-07-27 00:06:13] -rw-r--r--. 1 boinc boinc    530466 Jul 26 00:55 pilot3.tar.gz
[2025-07-27 00:06:13] -rw-r--r--. 1 boinc boinc      5112 Jul 26 00:56 queuedata.json
[2025-07-27 00:06:13] -rwx------. 1 boinc boinc     36292 Jul 26 00:58 runpilot2-wrapper.sh
[2025-07-27 00:06:13] -rw-r--r--. 1 boinc boinc       100 Jul 26 17:54 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-27 00:06:13] -rwxr-xr-x. 1 boinc boinc      7986 Jul 26 17:54 run_atlas
[2025-07-27 00:06:13] -rw-r--r--. 1 boinc boinc       105 Jul 26 17:54 job.xml
[2025-07-27 00:06:13] -rw-r--r--. 1 boinc boinc      6392 Jul 26 17:54 init_data.xml
[2025-07-27 00:06:13] -rw-r--r--. 2 boinc boinc 146102870 Jul 26 17:54 EVNT.45743347._001590.pool.root.1
[2025-07-27 00:06:13] -rw-r--r--. 2 boinc boinc     15095 Jul 26 17:54 start_atlas.sh
[2025-07-27 00:06:13] drwxrwx--x. 2 boinc boinc        68 Jul 26 17:54 shared
[2025-07-27 00:06:13] -rw-r--r--. 2 boinc boinc    542894 Jul 26 17:54 input.tar.gz
[2025-07-27 00:06:13] -rw-r--r--. 1 boinc boinc         0 Jul 26 17:54 boinc_lockfile
[2025-07-27 00:06:13] -rw-r--r--. 1 boinc boinc      2563 Jul 26 17:54 pandaJob.out
[2025-07-27 00:06:13] -rw-------. 1 boinc boinc    980133 Jul 26 17:55 agis_schedconf.cvmfs.json
[2025-07-27 00:06:13] drwx------. 4 boinc boinc      4096 Jul 26 17:55 pilot3
[2025-07-27 00:06:13] -rw-------. 1 boinc boinc 207923095 Jul 26 22:04 HITS.45743349._028468.pool.root.1
[2025-07-27 00:06:13] -rw-r--r--. 1 boinc boinc       531 Jul 26 22:04 boinc_task_state.xml
[2025-07-27 00:06:13] -rw-------. 1 boinc boinc      1015 Jul 26 22:05 memory_monitor_summary.json
[2025-07-27 00:06:13] -rw-------. 1 boinc boinc   1593052 Jul 26 22:05 agis_ddmendpoints.agis.ALL.json
[2025-07-27 00:06:13] -rw-------. 1 boinc boinc    384193 Jul 26 22:05 log.45743349._028468.job.log.tgz.1
[2025-07-27 00:06:13] -rw-------. 1 boinc boinc        95 Jul 26 22:07 pilot_heartbeat.json
[2025-07-27 00:06:13] -rw-------. 1 boinc boinc      7775 Jul 26 22:07 heartbeat.json
[2025-07-27 00:06:13] -rw-------. 1 boinc boinc       889 Jul 26 22:08 pilotlog.txt
[2025-07-27 00:06:13] -rw-------. 1 boinc boinc   1303512 Jul 26 22:08 log.45743349._028468.job.log.1
[2025-07-27 00:06:13] -rw-------. 1 boinc boinc       357 Jul 26 22:08 output.list
[2025-07-27 00:06:13] -rw-r--r--. 1 boinc boinc       620 Jul 26 22:08 runtime_log
[2025-07-27 00:06:13] -rw-------. 1 boinc boinc   1710080 Jul 26 22:08 result.tar.gz
[2025-07-27 00:06:13] -rw-------. 1 boinc boinc       656 Jul 26 22:08 yMuLDmWYgz7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmofQLDmr6L0Cn.diag
[2025-07-27 00:06:13] -rw-r--r--. 1 boinc boinc      8660 Jul 26 22:08 runtime_log.err
[2025-07-27 00:06:13] -rw-r--r--. 1 boinc boinc      8192 Jul 27 00:06 boinc_mmap_file
[2025-07-27 00:06:13] -rw-r--r--. 1 boinc boinc        28 Jul 27 00:06 wrapper_checkpoint.txt
[2025-07-27 00:06:13] -rw-r--r--. 1 boinc boinc     20586 Jul 27 00:06 stderr.txt
[2025-07-27 00:06:13] HITS file was successfully produced:
[2025-07-27 00:06:13] -rw-------. 1 boinc boinc 207923095 Jul 26 22:04 shared/HITS.pool.root.1
[2025-07-27 00:06:13]  *** Contents of shared directory: ***
[2025-07-27 00:06:13] total 347952
[2025-07-27 00:06:13] -rw-r--r--. 2 boinc boinc 146102870 Jul 26 17:54 ATLAS.root_0
[2025-07-27 00:06:13] -rw-r--r--. 2 boinc boinc     15095 Jul 26 17:54 start_atlas.sh
[2025-07-27 00:06:13] -rw-r--r--. 2 boinc boinc    542894 Jul 26 17:54 input.tar.gz
[2025-07-27 00:06:13] -rw-------. 1 boinc boinc 207923095 Jul 26 22:04 HITS.pool.root.1
[2025-07-27 00:06:13] -rw-------. 1 boinc boinc   1710080 Jul 26 22:08 result.tar.gz
00:06:15 (31487): run_atlas exited; CPU time 58303.322328
00:06:15 (31487): called boinc_finish(0)

</stderr_txt>
]]>

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