Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
00:43:52 (6886): wrapper (7.7.26015): starting
00:43:52 (6886): wrapper: running run_atlas (--nthreads 12)
[2025-07-26 00:43:52] Arguments: --nthreads 12
[2025-07-26 00:43:52] Threads: 12
[2025-07-26 00:43:52] Checking for CVMFS
[2025-07-26 00:43:52] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-26 00:43:52] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-26 00:43:52] Running cvmfs_config stat atlas.cern.ch
[2025-07-26 00:43:52] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-26 00:43:52] 2.11.2.0 2924 110051 97432 148764 1 59 14705700 20275200 1 130560 0 38114634 99.971 10198490 11217 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-07-26 00:43:52] CVMFS is ok
[2025-07-26 00:43:52] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-26 00:43:52] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-26 00:43:52] Further information can be found at the LHC@home message board.
[2025-07-26 00:43:52] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-26 00:43:52] Checking for apptainer binary...
[2025-07-26 00:43:52] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-26 00:43:52] Running /usr/bin/apptainer --version
[2025-07-26 00:43:52] apptainer version 1.3.2-1.el7
[2025-07-26 00:43:52] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-26 00:43:54] c-205-28.aglt2.org
[2025-07-26 00:43:54] apptainer works
[2025-07-26 00:43:54] Set ATHENA_PROC_NUMBER=12
[2025-07-26 00:43:54] Set ATHENA_CORE_NUMBER=12
[2025-07-26 00:43:54] Starting ATLAS job with PandaID=6745064094
[2025-07-26 00:43:54] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-26 02:10:28]  *** The last 200 lines of the pilot log: ***
[2025-07-26 02:10:28]  lfn=log.45743349._028282.job.log.tgz.1
[2025-07-26 02:10:28]  mtime=0
[2025-07-26 02:10:28]  protocol_id=None
[2025-07-26 02:10:28]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-07-26 02:10:28]  replicas=None
[2025-07-26 02:10:28]  scope=mc23_13p6TeV
[2025-07-26 02:10:28]  status=None
[2025-07-26 02:10:28]  status_code=0
[2025-07-26 02:10:28]  storage_token=
[2025-07-26 02:10:28]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6745064094/log.45743349._028282.job.log.tgz.1
[2025-07-26 02:10:28]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/0f/cc/log.45743349._028282.job.log.tgz.1
[2025-07-26 02:10:28]  workdir=None
[2025-07-26 02:10:28] ]
[2025-07-26 02:10:28] 2025-07-26 06:09:47,598 | INFO     | transferring file log.45743349._028282.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6745064094/log.45743349._028282.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-07-26 02:10:28] 2025-07-26 06:09:47,598 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6745064094/log.45743349._028282.job.log.tgz.1 /tmp/boinchome/slots/0/log.45743349._028282.job
[2025-07-26 02:10:28] 2025-07-26 06:09:47,620 | INFO     | adding to output.list: log.45743349._028282.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/0f/cc/log.45743349._028282.job.log.tg
[2025-07-26 02:10:28] 2025-07-26 06:09:47,621 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-26 02:10:28] 2025-07-26 06:09:47,621 | INFO     | summary of transferred files:
[2025-07-26 02:10:28] 2025-07-26 06:09:47,621 | INFO     |  -- lfn=log.45743349._028282.job.log.tgz.1, status_code=0, status=transferred
[2025-07-26 02:10:28] 2025-07-26 06:09:47,622 | INFO     | stage-out finished correctly
[2025-07-26 02:10:28] 2025-07-26 06:09:49,033 | INFO     | monitor loop #383: job 0:6745064094 is in state 'finished'
[2025-07-26 02:10:28] 2025-07-26 06:09:49,033 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-26 02:10:28] 2025-07-26 06:09:50,484 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-26 02:10:28] 2025-07-26 06:09:51,377 | INFO     | job 6745064094 has state=finished
[2025-07-26 02:10:28] 2025-07-26 06:09:51,377 | INFO     | preparing for final server update for job 6745064094 in state='finished'
[2025-07-26 02:10:28] 2025-07-26 06:09:51,378 | INFO     | this job has now completed (state=finished)
[2025-07-26 02:10:28] 2025-07-26 06:09:51,378 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-26 02:10:28] 2025-07-26 06:09:51,379 | INFO     | log transfer has been attempted: DONE
[2025-07-26 02:10:28] 2025-07-26 06:09:51,379 | INFO     | job 6745064094 has finished - writing final server update
[2025-07-26 02:10:28] 2025-07-26 06:09:51,380 | INFO     | total number of processed events: 400 (read)
[2025-07-26 02:10:28] 2025-07-26 06:09:51,381 | INFO     | executing command: lscpu
[2025-07-26 02:10:28] 2025-07-26 06:09:51,412 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-26 02:10:28] 2025-07-26 06:09:51,536 | INFO     | monitor loop #384: job 0:6745064094 is in state 'finished'
[2025-07-26 02:10:28] 2025-07-26 06:09:51,536 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-26 02:10:28] 2025-07-26 06:09:54,039 | INFO     | monitor loop #385: job 0:6745064094 is in state 'finished'
[2025-07-26 02:10:28] 2025-07-26 06:09:54,040 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-26 02:10:28] 2025-07-26 06:09:55,524 | INFO     | PID=10539 has CPU usage=6.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-07-26 02:10:28] 2025-07-26 06:09:56,365 | INFO     | CPU arch script returned: x86-64-v2
[2025-07-26 02:10:28] 2025-07-26 06:09:56,369 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1695.8333333333333
[2025-07-26 02:10:28] 2025-07-26 06:09:56,372 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6745064094/memory_monitor_summary.json (trf name=prmon)
[2025-07-26 02:10:28] 2025-07-26 06:09:56,373 | INFO     | extracted standard info from prmon json
[2025-07-26 02:10:28] 2025-07-26 06:09:56,373 | INFO     | extracted standard memory fields from prmon json
[2025-07-26 02:10:28] 2025-07-26 06:09:56,373 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-26 02:10:28] 2025-07-26 06:09:56,373 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-26 02:10:28] 2025-07-26 06:09:56,373 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-26 02:10:28] 2025-07-26 06:09:56,375 | INFO     | fitting pss+swap vs Time
[2025-07-26 02:10:28] 2025-07-26 06:09:56,375 | INFO     | sum of square deviations: 141539398.0
[2025-07-26 02:10:28] 2025-07-26 06:09:56,376 | INFO     | sum of deviations: -8273533334.0
[2025-07-26 02:10:28] 2025-07-26 06:09:56,376 | INFO     | mean x: 1753507701.0
[2025-07-26 02:10:28] 2025-07-26 06:09:56,376 | INFO     | mean y: 2756229.1298701297
[2025-07-26 02:10:28] 2025-07-26 06:09:56,376 | INFO     | -- intersect: 102502163607.20282
[2025-07-26 02:10:28] 2025-07-26 06:09:56,376 | INFO     | intersect: 102502163607.20282
[2025-07-26 02:10:28] 2025-07-26 06:09:56,376 | INFO     | chi2: 0.09523211397312333
[2025-07-26 02:10:28] 2025-07-26 06:09:56,377 | INFO     | -- intersect: 102502163607.20282
[2025-07-26 02:10:28] 2025-07-26 06:09:56,377 | INFO     | current memory leak: -58.45 B/s (using 77 data points, chi2=0.10)
[2025-07-26 02:10:28] 2025-07-26 06:09:56,377 | INFO     | could have reported an average CPU frequency of 2028 MHz (6 samples)
[2025-07-26 02:10:28] 2025-07-26 06:09:56,377 | INFO     | ..............................
[2025-07-26 02:10:28] 2025-07-26 06:09:56,377 | INFO     | . Timing measurements:
[2025-07-26 02:10:28] 2025-07-26 06:09:56,377 | INFO     | . get job = 0 s
[2025-07-26 02:10:28] 2025-07-26 06:09:56,377 | INFO     | . initial setup = 2 s
[2025-07-26 02:10:28] 2025-07-26 06:09:56,378 | INFO     | . payload setup = 9 s
[2025-07-26 02:10:28] 2025-07-26 06:09:56,378 | INFO     | . stage-in = 0 s
[2025-07-26 02:10:28] 2025-07-26 06:09:56,378 | INFO     | . payload execution = 5110 s
[2025-07-26 02:10:28] 2025-07-26 06:09:56,378 | INFO     | . stage-out = 0 s
[2025-07-26 02:10:28] 2025-07-26 06:09:56,378 | INFO     | . log creation = 0 s
[2025-07-26 02:10:28] 2025-07-26 06:09:56,378 | INFO     | ..............................
[2025-07-26 02:10:28] 2025-07-26 06:09:56,465 | INFO     | 
[2025-07-26 02:10:28] 2025-07-26 06:09:56,465 | INFO     | job summary report
[2025-07-26 02:10:28] 2025-07-26 06:09:56,465 | INFO     | --------------------------------------------------
[2025-07-26 02:10:28] 2025-07-26 06:09:56,465 | INFO     | PanDA job id: 6745064094
[2025-07-26 02:10:28] 2025-07-26 06:09:56,465 | INFO     | task id: 45743349
[2025-07-26 02:10:28] 2025-07-26 06:09:56,465 | INFO     | errors: (none)
[2025-07-26 02:10:28] 2025-07-26 06:09:56,466 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-26 02:10:28] 2025-07-26 06:09:56,466 | INFO     | pilot state: finished 
[2025-07-26 02:10:28] 2025-07-26 06:09:56,466 | INFO     | transexitcode: 0
[2025-07-26 02:10:28] 2025-07-26 06:09:56,466 | INFO     | exeerrorcode: 0
[2025-07-26 02:10:28] 2025-07-26 06:09:56,466 | INFO     | exeerrordiag: 
[2025-07-26 02:10:28] 2025-07-26 06:09:56,466 | INFO     | exitcode: 0
[2025-07-26 02:10:28] 2025-07-26 06:09:56,467 | INFO     | exitmsg: OK
[2025-07-26 02:10:28] 2025-07-26 06:09:56,467 | INFO     | cpuconsumptiontime: 56006 s
[2025-07-26 02:10:28] 2025-07-26 06:09:56,467 | INFO     | nevents: 400
[2025-07-26 02:10:28] 2025-07-26 06:09:56,467 | INFO     | neventsw: 0
[2025-07-26 02:10:28] 2025-07-26 06:09:56,467 | INFO     | pid: 17910
[2025-07-26 02:10:28] 2025-07-26 06:09:56,467 | INFO     | pgrp: 17910
[2025-07-26 02:10:28] 2025-07-26 06:09:56,468 | INFO     | corecount: 12
[2025-07-26 02:10:28] 2025-07-26 06:09:56,468 | INFO     | event service: False
[2025-07-26 02:10:28] 2025-07-26 06:09:56,468 | INFO     | sizes: {0: 2397242, 1: 2397497, 6: 2397759, 12: 2397787, 5123: 2424087, 5124: 2424086, 5125: 2433268, 5128: 2433324, 5134: 2433518}
[2025-07-26 02:10:28] 2025-07-26 06:09:56,468 | INFO     | --------------------------------------------------
[2025-07-26 02:10:28] 2025-07-26 06:09:56,468 | INFO     | 
[2025-07-26 02:10:28] 2025-07-26 06:09:56,468 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-07-26 02:10:28] 2025-07-26 06:09:56,495 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-26 02:10:28] 2025-07-26 06:09:56,496 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-26 02:10:28] 2025-07-26 06:09:56,496 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-26 02:10:28] 2025-07-26 06:09:56,496 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-26 02:10:28] 2025-07-26 06:09:56,496 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-26 02:10:28] 2025-07-26 06:09:56,497 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-26 02:10:28] 2025-07-26 06:09:56,497 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-26 02:10:28] 2025-07-26 06:09:56,497 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-26 02:10:28] 2025-07-26 06:09:56,497 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-26 02:10:28] 2025-07-26 06:09:56,497 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-26 02:10:28] 2025-07-26 06:09:56,497 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-26 02:10:28] 2025-07-26 06:09:56,498 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-26 02:10:28] 2025-07-26 06:09:56,498 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-26 02:10:28] 2025-07-26 06:09:56,498 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-26 02:10:28] 2025-07-26 06:09:56,498 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-26 02:10:28] 2025-07-26 06:09:56,498 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-26 02:10:28] 2025-07-26 06:09:56,499 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-26 02:10:28] 2025-07-26 06:09:56,499 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-26 02:10:28] 2025-07-26 06:09:56,499 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-26 02:10:28] 2025-07-26 06:09:56,499 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-26 02:10:28] 2025-07-26 06:09:56,499 | INFO     | job 6745064094 has completed (purged errors)
[2025-07-26 02:10:28] 2025-07-26 06:09:56,500 | INFO     | overall cleanup function is called
[2025-07-26 02:10:28] 2025-07-26 06:09:57,504 | INFO     | --- collectZombieJob: --- 10, [17910]
[2025-07-26 02:10:28] 2025-07-26 06:09:57,504 | INFO     | zombie collector waiting for pid 17910
[2025-07-26 02:10:28] 2025-07-26 06:09:57,504 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-26 02:10:28] 2025-07-26 06:09:57,504 | INFO     | collected zombie processes
[2025-07-26 02:10:28] 2025-07-26 06:09:57,504 | INFO     | will attempt to kill all subprocesses of pid=17910
[2025-07-26 02:10:28] 2025-07-26 06:09:57,598 | INFO     | process IDs to be killed: [17910] (in reverse order)
[2025-07-26 02:10:28] 2025-07-26 06:09:57,652 | WARNING  | found no corresponding commands to process id(s)
[2025-07-26 02:10:28] 2025-07-26 06:09:57,652 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-26 02:10:28] 2025-07-26 06:09:57,655 | INFO     | did not find any defunct processes belonging to 17910
[2025-07-26 02:10:28] 2025-07-26 06:09:57,658 | INFO     | did not find any defunct processes belonging to 17910
[2025-07-26 02:10:28] 2025-07-26 06:09:57,659 | INFO     | ready for new job
[2025-07-26 02:10:28] 2025-07-26 06:09:57,659 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-26 02:10:28] 2025-07-26 06:09:57,661 | INFO     | ***************************************
[2025-07-26 02:10:28] 2025-07-26 06:09:57,661 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-26 02:10:28] 2025-07-26 06:09:57,661 | INFO     | ***************************************
[2025-07-26 02:10:28] 2025-07-26 06:09:57,661 | INFO     | 
[2025-07-26 02:10:28] 2025-07-26 06:09:57,662 | INFO     | architecture information:
[2025-07-26 02:10:28] 2025-07-26 06:09:57,662 | INFO     | executing command: cat /etc/os-release
[2025-07-26 02:10:28] 2025-07-26 06:09:57,678 | INFO     | cat /etc/os-release:
[2025-07-26 02:10:28] NAME="CentOS Linux"
[2025-07-26 02:10:28] VERSION="7 (Core)"
[2025-07-26 02:10:28] ID="centos"
[2025-07-26 02:10:28] ID_LIKE="rhel fedora"
[2025-07-26 02:10:28] VERSION_ID="7"
[2025-07-26 02:10:28] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-26 02:10:28] ANSI_COLOR="0;31"
[2025-07-26 02:10:28] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-26 02:10:28] HOME_URL="https://www.centos.org/"
[2025-07-26 02:10:28] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-26 02:10:28] 
[2025-07-26 02:10:28] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-26 02:10:28] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-26 02:10:28] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-26 02:10:28] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-26 02:10:28] 
[2025-07-26 02:10:28] 2025-07-26 06:09:57,678 | INFO     | ***************************************
[2025-07-26 02:10:28] 2025-07-26 06:09:58,179 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-07-26 02:10:28] 2025-07-26 06:09:58,196 | INFO     | sufficient remaining disk space (29500637184 B)
[2025-07-26 02:10:28] 2025-07-26 06:09:58,197 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-26 02:10:28] 2025-07-26 06:09:58,197 | INFO     | current server update state: UPDATING_FINAL
[2025-07-26 02:10:28] 2025-07-26 06:09:58,197 | INFO     | update_server=False
[2025-07-26 02:10:28] 2025-07-26 06:09:58,197 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-26 02:10:28] 2025-07-26 06:09:58,198 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-26 02:10:28] 2025-07-26 06:09:58,198 | INFO     | aborting loop
[2025-07-26 02:10:28] 2025-07-26 06:09:58,198 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-26 02:10:28] 2025-07-26 06:09:58,228 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-26 02:10:28] 2025-07-26 06:09:58,807 | INFO     | all job control threads have been joined
[2025-07-26 02:10:28] 2025-07-26 06:09:59,202 | INFO     | [job] retrieve thread has finished
[2025-07-26 02:10:28] 2025-07-26 06:09:59,203 | INFO     | [job] job monitor thread has finished
[2025-07-26 02:10:28] 2025-07-26 06:09:59,204 | INFO     | [job] queue monitor thread has finished
[2025-07-26 02:10:28] 2025-07-26 06:09:59,214 | INFO     | all payload control threads have been joined
[2025-07-26 02:10:28] 2025-07-26 06:09:59,252 | INFO     | all data control threads have been joined
[2025-07-26 02:10:28] 2025-07-26 06:09:59,314 | INFO     | [payload] execute_payloads thread has finished
[2025-07-26 02:10:28] 2025-07-26 06:09:59,417 | INFO     | [data] copytool_in thread has finished
[2025-07-26 02:10:28] 2025-07-26 06:09:59,813 | INFO     | [job] control thread has finished
[2025-07-26 02:10:28] 2025-07-26 06:10:00,087 | INFO     | [payload] failed_post thread has finished
[2025-07-26 02:10:28] 2025-07-26 06:10:00,220 | INFO     | [payload] control thread has finished
[2025-07-26 02:10:28] 2025-07-26 06:10:00,233 | INFO     | [data] copytool_out thread has finished
[2025-07-26 02:10:28] 2025-07-26 06:10:00,257 | INFO     | [data] control thread has finished
[2025-07-26 02:10:28] 2025-07-26 06:10:00,412 | INFO     | [job] validate thread has finished
[2025-07-26 02:10:28] 2025-07-26 06:10:00,597 | INFO     | [job] create_data_payload thread has finished
[2025-07-26 02:10:28] 2025-07-26 06:10:00,626 | INFO     | [payload] validate_pre thread has finished
[2025-07-26 02:10:28] 2025-07-26 06:10:00,676 | INFO     | [payload] validate_post thread has finished
[2025-07-26 02:10:28] 2025-07-26 06:10:01,087 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-26 02:10:28] 2025-07-26 06:10:05,092 | INFO     | [data] queue_monitor thread has finished
[2025-07-26 02:10:28] 2025-07-26 06:10:08,804 | INFO     | job.realtimelogging is not enabled
[2025-07-26 02:10:28] 2025-07-26 06:10:09,807 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-26 02:10:28] 2025-07-26 06:10:11,085 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139713679947584)>', '<ExcThread(monitor, started 139713239299840)>']
[2025-07-26 02:10:28] 2025-07-26 06:10:16,110 | INFO     | all workflow threads have been joined
[2025-07-26 02:10:28] 2025-07-26 06:10:16,110 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-26 02:10:28] 2025-07-26 06:10:16,117 | INFO     | traces error code: 0
[2025-07-26 02:10:28] 2025-07-26 06:10:16,117 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-26 02:10:28] 2025-07-26 06:10:27,721 | INFO     | PID=10539 has CPU usage=1.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-07-26 02:10:28] 2025-07-26 06:10:27,722 | INFO     | found 0 job(s) in 20 queues
[2025-07-26 02:10:28] 2025-07-26 06:10:27,722 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-26 02:10:28] 2025-07-26 06:10:27,722 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-26 02:10:28] 2025-07-26 06:10:27,722 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-26 02:10:28] 2025-07-26 06:10:27,722 | INFO     | [monitor] control thread has ended
[2025-07-26 02:10:28] 2025-07-26 06:10:27,809 [wrapper] ==== pilot stdout END ====
[2025-07-26 02:10:28] 2025-07-26 06:10:27,814 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-26 02:10:28] 2025-07-26 06:10:27,817 [wrapper] pilotpid: 10539
[2025-07-26 02:10:28] 2025-07-26 06:10:27,821 [wrapper] Pilot exit status: 0
[2025-07-26 02:10:28] 2025-07-26 06:10:27,838 [wrapper] pandaids: 6745064094
[2025-07-26 02:10:28] 2025-07-26 06:10:27,877 [wrapper] cleanup supervisor_pilot  8020 10540
[2025-07-26 02:10:28] 2025-07-26 06:10:27,881 [wrapper] Test setup, not cleaning
[2025-07-26 02:10:28] 2025-07-26 06:10:27,885 [wrapper] apfmon messages muted
[2025-07-26 02:10:28] 2025-07-26 06:10:27,889 [wrapper] ==== wrapper stdout END ====
[2025-07-26 02:10:28] 2025-07-26 06:10:27,893 [wrapper] ==== wrapper stderr END ====
[2025-07-26 02:10:28]  *** Error codes and diagnostics ***
[2025-07-26 02:10:28]     "exeErrorCode": 0,
[2025-07-26 02:10:28]     "exeErrorDiag": "",
[2025-07-26 02:10:28]     "pilotErrorCode": 0,
[2025-07-26 02:10:28]     "pilotErrorDiag": "",
[2025-07-26 02:10:28]  *** Listing of results directory ***
[2025-07-26 02:10:28] total 362528
[2025-07-26 02:10:28] -rw-r--r-- 1 boincer umatlas    530466 Jul 25 18:32 pilot3.tar.gz
[2025-07-26 02:10:28] -rw-r--r-- 1 boincer umatlas      5112 Jul 25 18:49 queuedata.json
[2025-07-26 02:10:28] -rwx------ 1 boincer umatlas     36292 Jul 25 18:49 runpilot2-wrapper.sh
[2025-07-26 02:10:28] -rw-r--r-- 1 boincer umatlas       100 Jul 26 00:43 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-26 02:10:28] -rwxr-xr-x 1 boincer umatlas      7986 Jul 26 00:43 run_atlas
[2025-07-26 02:10:28] -rw-r--r-- 1 boincer umatlas       105 Jul 26 00:43 job.xml
[2025-07-26 02:10:28] -rw-r--r-- 2 boincer umatlas 149657007 Jul 26 00:43 EVNT.45743347._001578.pool.root.1
[2025-07-26 02:10:28] -rw-r--r-- 2 boincer umatlas     15095 Jul 26 00:43 start_atlas.sh
[2025-07-26 02:10:28] drwxrwx--x 2 boincer umatlas      4096 Jul 26 00:43 shared
[2025-07-26 02:10:28] -rw-r--r-- 2 boincer umatlas    542882 Jul 26 00:43 input.tar.gz
[2025-07-26 02:10:28] -rw-r--r-- 1 boincer umatlas         0 Jul 26 00:43 boinc_lockfile
[2025-07-26 02:10:28] -rw-r--r-- 1 boincer umatlas      2560 Jul 26 00:43 pandaJob.out
[2025-07-26 02:10:28] -rw------- 1 boincer umatlas    980001 Jul 26 00:44 agis_schedconf.cvmfs.json
[2025-07-26 02:10:28] -rw------- 1 boincer umatlas   1593052 Jul 26 00:44 agis_ddmendpoints.agis.ALL.json
[2025-07-26 02:10:28] drwx------ 4 boincer umatlas      4096 Jul 26 00:44 pilot3
[2025-07-26 02:10:28] -rw-r--r-- 1 boincer umatlas      5867 Jul 26 02:04 init_data.xml
[2025-07-26 02:10:28] -rw------- 1 boincer umatlas 216018544 Jul 26 02:09 HITS.45743349._028282.pool.root.1
[2025-07-26 02:10:28] -rw-r--r-- 1 boincer umatlas       529 Jul 26 02:09 boinc_task_state.xml
[2025-07-26 02:10:28] -rw------- 1 boincer umatlas      1050 Jul 26 02:09 memory_monitor_summary.json
[2025-07-26 02:10:28] -rw------- 1 boincer umatlas    353235 Jul 26 02:09 log.45743349._028282.job.log.tgz.1
[2025-07-26 02:10:28] -rw------- 1 boincer umatlas      7864 Jul 26 02:09 heartbeat.json
[2025-07-26 02:10:28] -rw-r--r-- 1 boincer umatlas      8192 Jul 26 02:10 boinc_mmap_file
[2025-07-26 02:10:28] -rw-r--r-- 1 boincer umatlas        27 Jul 26 02:10 wrapper_checkpoint.txt
[2025-07-26 02:10:28] -rw------- 1 boincer umatlas       745 Jul 26 02:10 pilotlog.txt
[2025-07-26 02:10:28] -rw------- 1 boincer umatlas        95 Jul 26 02:10 pilot_heartbeat.json
[2025-07-26 02:10:28] -rw------- 1 boincer umatlas    486898 Jul 26 02:10 log.45743349._028282.job.log.1
[2025-07-26 02:10:28] -rw------- 1 boincer umatlas       357 Jul 26 02:10 output.list
[2025-07-26 02:10:28] -rw-r--r-- 1 boincer umatlas       620 Jul 26 02:10 runtime_log
[2025-07-26 02:10:28] -rw------- 1 boincer umatlas    860160 Jul 26 02:10 result.tar.gz
[2025-07-26 02:10:28] -rw-r--r-- 1 boincer umatlas      8662 Jul 26 02:10 runtime_log.err
[2025-07-26 02:10:28] -rw------- 1 boincer umatlas       659 Jul 26 02:10 eRhKDmTPgz7n9Rq4apOajLDm4fhM0noT9bVof3QYDmXizKDmyTIgnn.diag
[2025-07-26 02:10:28] -rw-r--r-- 1 boincer umatlas     21775 Jul 26 02:10 stderr.txt
[2025-07-26 02:10:28] HITS file was successfully produced:
[2025-07-26 02:10:28] -rw------- 1 boincer umatlas 216018544 Jul 26 02:09 shared/HITS.pool.root.1
[2025-07-26 02:10:28]  *** Contents of shared directory: ***
[2025-07-26 02:10:28] total 358500
[2025-07-26 02:10:28] -rw-r--r-- 2 boincer umatlas 149657007 Jul 26 00:43 ATLAS.root_0
[2025-07-26 02:10:28] -rw-r--r-- 2 boincer umatlas     15095 Jul 26 00:43 start_atlas.sh
[2025-07-26 02:10:28] -rw-r--r-- 2 boincer umatlas    542882 Jul 26 00:43 input.tar.gz
[2025-07-26 02:10:28] -rw------- 1 boincer umatlas 216018544 Jul 26 02:09 HITS.pool.root.1
[2025-07-26 02:10:28] -rw------- 1 boincer umatlas    860160 Jul 26 02:10 result.tar.gz
02:10:29 (6886): run_atlas exited; CPU time 55971.337396
02:10:29 (6886): called boinc_finish(0)

</stderr_txt>
]]>

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