Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
21:36:00 (121892): wrapper (7.7.26015): starting
21:36:00 (121892): wrapper: running run_atlas (--nthreads 8)
[2025-07-25 21:36:00] Arguments: --nthreads 8
[2025-07-25 21:36:00] Threads: 8
[2025-07-25 21:36:00] Checking for CVMFS
[2025-07-25 21:36:00] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-25 21:36:01] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-25 21:36:01] Running cvmfs_config stat atlas.cern.ch
[2025-07-25 21:36:01] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-25 21:36:01] 2.11.3.0 22724 476994 212328 148764 3 303 45174579 45568001 9494 130560 0 2555316622 99.768 1968947368 17502 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.163:3129 1
[2025-07-25 21:36:01] CVMFS is ok
[2025-07-25 21:36:01] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-25 21:36:01] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-25 21:36:01] Further information can be found at the LHC@home message board.
[2025-07-25 21:36:01] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-25 21:36:01] Checking for apptainer binary...
[2025-07-25 21:36:01] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-25 21:36:01] Running /usr/bin/apptainer --version
[2025-07-25 21:36:01] apptainer version 1.3.3-1.el9
[2025-07-25 21:36:01] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-25 21:36:01] WARNING: Environment variable TMPDIR already has value [/home/boinc/slots/0/.apptainertmp], will not forward new value [/home/boinc] from parent process environment wns0020.triumf.lcg
[2025-07-25 21:36:01] apptainer works
[2025-07-25 21:36:01] Set ATHENA_PROC_NUMBER=8
[2025-07-25 21:36:01] Set ATHENA_CORE_NUMBER=8
[2025-07-25 21:36:01] Starting ATLAS job with PandaID=6745093000
[2025-07-25 21:36:01] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-25 21:39:20]  *** The last 200 lines of the pilot log: ***
[2025-07-25 21:39:20] 2025-07-26 04:38:47,308 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-25 21:39:20] 2025-07-26 04:38:47,308 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-25 21:39:20] 2025-07-26 04:38:47,309 | WARNING  | found no stored workdir sizes
[2025-07-25 21:39:20] 2025-07-26 04:38:47,309 | INFO     | will not add max space = 0 B to job metrics
[2025-07-25 21:39:20] 2025-07-26 04:38:47,309 | WARNING  | wrong length of table data, x=[1753504591.0], y=[28195.0] (must be same and length>=4)
[2025-07-25 21:39:20] 2025-07-26 04:38:47,309 | INFO     | could have reported an average CPU frequency of 2097 MHz (4 samples)
[2025-07-25 21:39:20] 2025-07-26 04:38:47,310 | INFO     | ..............................
[2025-07-25 21:39:20] 2025-07-26 04:38:47,310 | INFO     | . Timing measurements:
[2025-07-25 21:39:20] 2025-07-26 04:38:47,310 | INFO     | . get job = 0 s
[2025-07-25 21:39:20] 2025-07-26 04:38:47,310 | INFO     | . initial setup = 2 s
[2025-07-25 21:39:20] 2025-07-26 04:38:47,310 | INFO     | . payload setup = 4 s
[2025-07-25 21:39:20] 2025-07-26 04:38:47,310 | INFO     | . stage-in = 0 s
[2025-07-25 21:39:20] 2025-07-26 04:38:47,310 | INFO     | . payload execution = 15 s
[2025-07-25 21:39:20] 2025-07-26 04:38:47,310 | INFO     | . stage-out = 0 s
[2025-07-25 21:39:20] 2025-07-26 04:38:47,310 | INFO     | . log creation = 0 s
[2025-07-25 21:39:20] 2025-07-26 04:38:47,311 | INFO     | ..............................
[2025-07-25 21:39:20] 2025-07-26 04:38:47,311 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-07-25 21:39:20] 2025-07-26 04:38:47,311 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6745093000/pilotlog.txt
[2025-07-25 21:39:20] 2025-07-26 04:38:47,319 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-07-25 21:39:20] - Log from pilotlog.txt -
[2025-07-25 21:39:20] 2025-07-26 04:38:47,308 | INFO     | extracted standard memory fields from prmon json
[2025-07-25 21:39:20] 2025-07-26 04:38:47,308 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-25 21:39:20] 2025-07-26 04:38:47,308 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-25 21:39:20] 2025-07-26 04:38:47,308 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-25 21:39:20] 2025-07-26 04:38:47,309 | WARNING  | found no stored workdir sizes
[2025-07-25 21:39:20] 2025-07-26 04:38:47,309 | INFO     | will not add max space = 0 B to job metrics
[2025-07-25 21:39:20] 2025-07-26 04:38:47,309 | WARNING  | wrong length of table data, x=[1753504591.0], y=[28195.0] (must be same and length>=4)
[2025-07-25 21:39:20] 2025-07-26 04:38:47,309 | INFO     | could have reported an average CPU frequency of 2097 MHz (4 samples)
[2025-07-25 21:39:20] 2025-07-26 04:38:47,310 | INFO     | ..............................
[2025-07-25 21:39:20] 2025-07-26 04:38:47,310 | INFO     | . Timing measurements:
[2025-07-25 21:39:20] 2025-07-26 04:38:47,310 | INFO     | . get job = 0 s
[2025-07-25 21:39:20] 2025-07-26 04:38:47,310 | INFO     | . initial setup = 2 s
[2025-07-25 21:39:20] 2025-07-26 04:38:47,310 | INFO     | . payload setup = 4 s
[2025-07-25 21:39:20] 2025-07-26 04:38:47,310 | INFO     | . stage-in = 0 s
[2025-07-25 21:39:20] 2025-07-26 04:38:47,310 | INFO     | . payload execution = 15 s
[2025-07-25 21:39:20] 2025-07-26 04:38:47,310 | INFO     | . stage-out = 0 s
[2025-07-25 21:39:20] 2025-07-26 04:38:47,310 | INFO     | . log creation = 0 s
[2025-07-25 21:39:20] 2025-07-26 04:38:47,311 | INFO     | ..............................
[2025-07-25 21:39:20] 2025-07-26 04:38:47,311 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-07-25 21:39:20] 2025-07-26 04:38:47,311 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6745093000/pilotlog.txt
[2025-07-25 21:39:20] 2025-07-26 04:38:47,320 | WARNING  | 
[2025-07-25 21:39:20] [begin log extracts]
[2025-07-25 21:39:20] - Log from pilotlog.txt -
[2025-07-25 21:39:20] 2025-07-26 04:38:47,308 | INFO     | extracted standard memory fields from prmon json
[2025-07-25 21:39:20] 2025-07-26 04:38:47,308 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-25 21:39:20] 2025-07-26 04:38:47,308 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-25 21:39:20] 2025-07-26 04:38:47,308 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-25 21:39:20] 2025-07-26 04:38:47,309 | WARNING  | found no stored workdir sizes
[2025-07-25 21:39:20] 2025-07-26 04:38:47,309 | INFO     | will not add max space = 0 B to job metrics
[2025-07-25 21:39:20] 2025-07-26 04:38:47,309 | WARNING  | wrong length of table data, x=[1753504591.0], y=[28195.0] (must be same and length>=4)
[2025-07-25 21:39:20] 2025-07-26 04:38:47,309 | INFO     | could have reported an average CPU frequency of 2097 MHz (4 samples)
[2025-07-25 21:39:20] 2025-07-26 04:38:47,310 | INFO     | ..............................
[2025-07-25 21:39:20] 2025-07-26 04:38:47,310 | INFO     | . Timing measurements:
[2025-07-25 21:39:20] 2025-07-26 04:38:47,310 | INFO     | . get job = 0 s
[2025-07-25 21:39:20] 2025-07-26 04:38:47,310 | INFO     | . initial setup = 2 s
[2025-07-25 21:39:20] 2025-07-26 04:38:47,310 | INFO     | . payload setup = 4 s
[2025-07-25 21:39:20] 2025-07-26 04:38:47,310 | INFO     | . stage-in = 0 s
[2025-07-25 21:39:20] 2025-07-26 04:38:47,310 | INFO     | . payload execution = 15 s
[2025-07-25 21:39:20] 2025-07-26 04:38:47,310 | INFO     | . stage-out = 0 s
[2025-07-25 21:39:20] 2025-07-26 04:38:47,310 | INFO     | . log creation = 0 s
[2025-07-25 21:39:20] 2025-07-26 04:38:47,311 | INFO     | ..............................
[2025-07-25 21:39:20] 2025-07-26 04:38:47,311 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-07-25 21:39:20] 2025-07-26 04:38:47,311 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6745093000/pilotlog.txt
[2025-07-25 21:39:20] [end log extracts]
[2025-07-25 21:39:20] 2025-07-26 04:38:47,320 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-07-25 21:39:20] 2025-07-26 04:38:47,321 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-07-25 21:39:20] 2025-07-26 04:38:47,646 | INFO     | 
[2025-07-25 21:39:20] 2025-07-26 04:38:47,646 | INFO     | job summary report
[2025-07-25 21:39:20] 2025-07-26 04:38:47,646 | INFO     | --------------------------------------------------
[2025-07-25 21:39:20] 2025-07-26 04:38:47,647 | INFO     | PanDA job id: 6745093000
[2025-07-25 21:39:20] 2025-07-26 04:38:47,647 | INFO     | task id: 45743349
[2025-07-25 21:39:20] 2025-07-26 04:38:47,647 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-07-25 21:36:38,639 CRITICAL Transform executor raised TransformValidationExceptio
[2025-07-25 21:39:20] 2025-07-26 04:38:47,647 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-25 21:39:20] 2025-07-26 04:38:47,647 | INFO     | pilot state: failed 
[2025-07-25 21:39:20] 2025-07-26 04:38:47,647 | INFO     | transexitcode: 65
[2025-07-25 21:39:20] 2025-07-26 04:38:47,647 | INFO     | exeerrorcode: 65
[2025-07-25 21:39:20] 2025-07-26 04:38:47,647 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2025-07-25 21:39:20] 2025-07-26 04:38:47,647 | INFO     | exitcode: 65
[2025-07-25 21:39:20] 2025-07-26 04:38:47,647 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2025-07-25 21:39:20] 2025-07-26 04:38:47,647 | INFO     | cpuconsumptiontime: 16 s
[2025-07-25 21:39:20] 2025-07-26 04:38:47,647 | INFO     | nevents: 0
[2025-07-25 21:39:20] 2025-07-26 04:38:47,647 | INFO     | neventsw: 0
[2025-07-25 21:39:20] 2025-07-26 04:38:47,648 | INFO     | pid: 131787
[2025-07-25 21:39:20] 2025-07-26 04:38:47,648 | INFO     | pgrp: 131787
[2025-07-25 21:39:20] 2025-07-26 04:38:47,648 | INFO     | corecount: 8
[2025-07-25 21:39:20] 2025-07-26 04:38:47,648 | INFO     | event service: False
[2025-07-25 21:39:20] 2025-07-26 04:38:47,648 | INFO     | sizes: {0: 2397472, 3: 2397734, 11: 2397762, 22: 2421008, 23: 2425304, 24: 2425304, 143: 2425598}
[2025-07-25 21:39:20] 2025-07-26 04:38:47,648 | INFO     | --------------------------------------------------
[2025-07-25 21:39:20] 2025-07-26 04:38:47,648 | INFO     | 
[2025-07-25 21:39:20] 2025-07-26 04:38:47,648 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-07-25 21:39:20] 2025-07-26 04:38:47,661 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-25 21:39:20] 2025-07-26 04:38:47,662 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-25 21:39:20] 2025-07-26 04:38:47,662 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-25 21:39:20] 2025-07-26 04:38:47,662 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-25 21:39:20] 2025-07-26 04:38:47,662 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-25 21:39:20] 2025-07-26 04:38:47,662 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-25 21:39:20] 2025-07-26 04:38:47,662 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-25 21:39:20] 2025-07-26 04:38:47,662 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-25 21:39:20] 2025-07-26 04:38:47,662 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-25 21:39:20] 2025-07-26 04:38:47,662 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-25 21:39:20] 2025-07-26 04:38:47,663 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-25 21:39:20] 2025-07-26 04:38:47,663 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-25 21:39:20] 2025-07-26 04:38:47,663 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-25 21:39:20] 2025-07-26 04:38:47,663 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-25 21:39:20] 2025-07-26 04:38:47,663 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-25 21:39:20] 2025-07-26 04:38:47,663 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-25 21:39:20] 2025-07-26 04:38:47,663 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-25 21:39:20] 2025-07-26 04:38:47,663 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-25 21:39:20] 2025-07-26 04:38:47,663 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-25 21:39:20] 2025-07-26 04:38:47,663 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-25 21:39:20] 2025-07-26 04:38:47,663 | INFO     | job 6745093000 has completed (purged errors)
[2025-07-25 21:39:20] 2025-07-26 04:38:47,664 | INFO     | overall cleanup function is called
[2025-07-25 21:39:20] 2025-07-26 04:38:48,669 | INFO     | --- collectZombieJob: --- 10, [131787]
[2025-07-25 21:39:20] 2025-07-26 04:38:48,669 | INFO     | zombie collector waiting for pid 131787
[2025-07-25 21:39:20] 2025-07-26 04:38:48,670 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-25 21:39:20] 2025-07-26 04:38:48,670 | INFO     | collected zombie processes
[2025-07-25 21:39:20] 2025-07-26 04:38:48,671 | INFO     | will attempt to kill all subprocesses of pid=131787
[2025-07-25 21:39:20] 2025-07-26 04:38:48,841 | INFO     | process IDs to be killed: [131787] (in reverse order)
[2025-07-25 21:39:20] 2025-07-26 04:38:48,895 | WARNING  | found no corresponding commands to process id(s)
[2025-07-25 21:39:20] 2025-07-26 04:38:48,896 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-25 21:39:20] 2025-07-26 04:38:48,901 | INFO     | did not find any defunct processes belonging to 131787
[2025-07-25 21:39:20] 2025-07-26 04:38:48,906 | INFO     | did not find any defunct processes belonging to 131787
[2025-07-25 21:39:20] 2025-07-26 04:38:48,906 | INFO     | ready for new job
[2025-07-25 21:39:20] 2025-07-26 04:38:48,906 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-25 21:39:20] 2025-07-26 04:38:48,907 | INFO     | ***************************************
[2025-07-25 21:39:20] 2025-07-26 04:38:48,908 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-25 21:39:20] 2025-07-26 04:38:48,908 | INFO     | ***************************************
[2025-07-25 21:39:20] 2025-07-26 04:38:48,908 | INFO     | 
[2025-07-25 21:39:20] 2025-07-26 04:38:48,921 | INFO     | architecture information:
[2025-07-25 21:39:20] 2025-07-26 04:38:48,922 | INFO     | executing command: cat /etc/os-release
[2025-07-25 21:39:20] 2025-07-26 04:38:48,931 | INFO     | cat /etc/os-release:
[2025-07-25 21:39:20] NAME="CentOS Linux"
[2025-07-25 21:39:20] VERSION="7 (Core)"
[2025-07-25 21:39:20] ID="centos"
[2025-07-25 21:39:20] ID_LIKE="rhel fedora"
[2025-07-25 21:39:20] VERSION_ID="7"
[2025-07-25 21:39:20] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-25 21:39:20] ANSI_COLOR="0;31"
[2025-07-25 21:39:20] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-25 21:39:20] HOME_URL="https://www.centos.org/"
[2025-07-25 21:39:20] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-25 21:39:20] 
[2025-07-25 21:39:20] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-25 21:39:20] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-25 21:39:20] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-25 21:39:20] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-25 21:39:20] 
[2025-07-25 21:39:20] 2025-07-26 04:38:48,932 | INFO     | ***************************************
[2025-07-25 21:39:20] 2025-07-26 04:38:49,434 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-07-25 21:39:20] 2025-07-26 04:38:49,446 | INFO     | sufficient remaining disk space (1323855511552 B)
[2025-07-25 21:39:20] 2025-07-26 04:38:49,446 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-25 21:39:20] 2025-07-26 04:38:49,447 | INFO     | current server update state: UPDATING_FINAL
[2025-07-25 21:39:20] 2025-07-26 04:38:49,447 | INFO     | update_server=False
[2025-07-25 21:39:20] 2025-07-26 04:38:49,447 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-25 21:39:20] 2025-07-26 04:38:49,684 | INFO     | all job control threads have been joined
[2025-07-25 21:39:20] 2025-07-26 04:38:50,091 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-25 21:39:20] 2025-07-26 04:38:50,280 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-25 21:39:20] 2025-07-26 04:38:50,280 | INFO     | aborting loop
[2025-07-25 21:39:20] 2025-07-26 04:38:50,345 | INFO     | all payload control threads have been joined
[2025-07-25 21:39:20] 2025-07-26 04:38:50,451 | INFO     | [job] retrieve thread has finished
[2025-07-25 21:39:20] 2025-07-26 04:38:50,454 | INFO     | all data control threads have been joined
[2025-07-25 21:39:20] 2025-07-26 04:38:50,527 | INFO     | [payload] validate_post thread has finished
[2025-07-25 21:39:20] 2025-07-26 04:38:50,569 | INFO     | [payload] validate_pre thread has finished
[2025-07-25 21:39:20] 2025-07-26 04:38:50,640 | INFO     | [data] copytool_in thread has finished
[2025-07-25 21:39:20] 2025-07-26 04:38:50,689 | INFO     | [job] control thread has finished
[2025-07-25 21:39:20] 2025-07-26 04:38:50,919 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-25 21:39:20] 2025-07-26 04:38:51,097 | INFO     | [payload] failed_post thread has finished
[2025-07-25 21:39:20] 2025-07-26 04:38:51,113 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-25 21:39:20] 2025-07-26 04:38:51,285 | INFO     | [job] job monitor thread has finished
[2025-07-25 21:39:20] 2025-07-26 04:38:51,350 | INFO     | [payload] control thread has finished
[2025-07-25 21:39:20] 2025-07-26 04:38:51,458 | INFO     | [data] control thread has finished
[2025-07-25 21:39:20] 2025-07-26 04:38:51,727 | INFO     | [job] validate thread has finished
[2025-07-25 21:39:20] 2025-07-26 04:38:51,866 | INFO     | [payload] execute_payloads thread has finished
[2025-07-25 21:39:20] 2025-07-26 04:38:51,908 | INFO     | [job] create_data_payload thread has finished
[2025-07-25 21:39:20] 2025-07-26 04:38:52,096 | INFO     | [data] copytool_out thread has finished
[2025-07-25 21:39:20] 2025-07-26 04:38:52,405 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-25 21:39:20] 2025-07-26 04:38:53,411 | INFO     | [job] queue monitor thread has finished
[2025-07-25 21:39:20] 2025-07-26 04:38:54,925 | INFO     | [data] queue_monitor thread has finished
[2025-07-25 21:39:20] 2025-07-26 04:38:56,229 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139989544576832)>', '<ExcThread(monitor, started 139988989622016)>']
[2025-07-25 21:39:20] 2025-07-26 04:39:01,254 | INFO     | all workflow threads have been joined
[2025-07-25 21:39:20] 2025-07-26 04:39:01,254 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-25 21:39:20] 2025-07-26 04:39:01,255 | INFO     | traces error code: 0
[2025-07-25 21:39:20] 2025-07-26 04:39:01,255 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-25 21:39:20] 2025-07-26 04:39:20,529 | INFO     | PID=125476 has CPU usage=1.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-07-25 21:39:20] 2025-07-26 04:39:20,529 | INFO     | .. there are 19 such processes running
[2025-07-25 21:39:20] 2025-07-26 04:39:20,530 | INFO     | found 0 job(s) in 20 queues
[2025-07-25 21:39:20] 2025-07-26 04:39:20,530 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-25 21:39:20] 2025-07-26 04:39:20,530 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-25 21:39:20] 2025-07-26 04:39:20,530 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-25 21:39:20] 2025-07-26 04:39:20,530 | INFO     | [monitor] control thread has ended
[2025-07-25 21:39:20] 2025-07-26 04:39:20,645 [wrapper] ==== pilot stdout END ====
[2025-07-25 21:39:20] 2025-07-26 04:39:20,648 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-25 21:39:20] 2025-07-26 04:39:20,650 [wrapper] pilotpid: 125476
[2025-07-25 21:39:20] 2025-07-26 04:39:20,652 [wrapper] Pilot exit status: 0
[2025-07-25 21:39:20] 2025-07-26 04:39:20,659 [wrapper] pandaids: 6745093000
[2025-07-25 21:39:20] 2025-07-26 04:39:20,692 [wrapper] cleanup supervisor_pilot  125482 125477
[2025-07-25 21:39:20] 2025-07-26 04:39:20,695 [wrapper] Test setup, not cleaning
[2025-07-25 21:39:20] 2025-07-26 04:39:20,697 [wrapper] apfmon messages muted
[2025-07-25 21:39:20] 2025-07-26 04:39:20,698 [wrapper] ==== wrapper stdout END ====
[2025-07-25 21:39:20] 2025-07-26 04:39:20,700 [wrapper] ==== wrapper stderr END ====
[2025-07-25 21:39:20]  *** Error codes and diagnostics ***
[2025-07-25 21:39:20]     "exeErrorCode": 65,
[2025-07-25 21:39:20]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2025-07-25 21:39:20]     "pilotErrorCode": 1305,
[2025-07-25 21:39:20]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2025-07-25 21:39:20]  *** Listing of results directory ***
[2025-07-25 21:39:20] total 227684
[2025-07-25 21:39:20] -rw-r--r--. 1 boinc boinc    530466 Jul 25 18:05 pilot3.tar.gz
[2025-07-25 21:39:20] -rw-r--r--. 1 boinc boinc      5112 Jul 25 18:39 queuedata.json
[2025-07-25 21:39:20] -rwx------. 1 boinc boinc     36292 Jul 25 18:41 runpilot2-wrapper.sh
[2025-07-25 21:39:20] -rw-r--r--. 1 boinc boinc       100 Jul 25 21:36 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-25 21:39:20] -rwxr-xr-x. 1 boinc boinc      7986 Jul 25 21:36 run_atlas
[2025-07-25 21:39:20] -rw-r--r--. 1 boinc boinc       105 Jul 25 21:36 job.xml
[2025-07-25 21:39:20] -rw-r--r--. 1 boinc boinc      6448 Jul 25 21:36 init_data.xml
[2025-07-25 21:39:20] -rw-r--r--. 2 boinc boinc 229079792 Jul 25 21:36 EVNT.45743347._001692.pool.root.1
[2025-07-25 21:39:20] -rw-r--r--. 2 boinc boinc     15095 Jul 25 21:36 start_atlas.sh
[2025-07-25 21:39:20] drwxrwx--x. 2 boinc boinc      4096 Jul 25 21:36 shared
[2025-07-25 21:39:20] -rw-r--r--. 2 boinc boinc    542896 Jul 25 21:36 input.tar.gz
[2025-07-25 21:39:20] -rw-r--r--. 1 boinc boinc         0 Jul 25 21:36 boinc_lockfile
[2025-07-25 21:39:20] -rw-r--r--. 1 boinc boinc      2563 Jul 25 21:36 pandaJob.out
[2025-07-25 21:39:20] -rw-------. 1 boinc boinc    980001 Jul 25 21:36 agis_schedconf.cvmfs.json
[2025-07-25 21:39:20] -rw-------. 1 boinc boinc   1593052 Jul 25 21:36 agis_ddmendpoints.agis.ALL.json
[2025-07-25 21:39:20] drwx------. 4 boinc boinc      4096 Jul 25 21:36 pilot3
[2025-07-25 21:39:20] -rw-------. 1 boinc boinc       960 Jul 25 21:36 memory_monitor_summary.json
[2025-07-25 21:39:20] -rw-------. 1 boinc boinc     20699 Jul 25 21:36 log.45743349._030213.job.log.tgz.1
[2025-07-25 21:39:20] -rw-r--r--. 1 boinc boinc       522 Jul 25 21:36 boinc_task_state.xml
[2025-07-25 21:39:20] -rw-------. 1 boinc boinc      8395 Jul 25 21:38 heartbeat.json
[2025-07-25 21:39:20] -rw-------. 1 boinc boinc        95 Jul 25 21:39 pilot_heartbeat.json
[2025-07-25 21:39:20] -rw-------. 1 boinc boinc       822 Jul 25 21:39 pilotlog.txt
[2025-07-25 21:39:20] -rw-r--r--. 1 boinc boinc        22 Jul 25 21:39 wrapper_checkpoint.txt
[2025-07-25 21:39:20] -rw-------. 1 boinc boinc     74256 Jul 25 21:39 log.45743349._030213.job.log.1
[2025-07-25 21:39:20] -rw-------. 1 boinc boinc       188 Jul 25 21:39 output.list
[2025-07-25 21:39:20] -rw-r--r--. 1 boinc boinc       620 Jul 25 21:39 runtime_log
[2025-07-25 21:39:20] -rw-------. 1 boinc boinc    112640 Jul 25 21:39 result.tar.gz
[2025-07-25 21:39:20] -rw-------. 1 boinc boinc       644 Jul 25 21:39 tQFLDm15iz7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm7xQLDmOxfjym.diag
[2025-07-25 21:39:20] -rw-r--r--. 1 boinc boinc      8648 Jul 25 21:39 runtime_log.err
[2025-07-25 21:39:20] -rw-r--r--. 1 boinc boinc      8192 Jul 25 21:39 boinc_mmap_file
[2025-07-25 21:39:20] -rw-r--r--. 1 boinc boinc     21794 Jul 25 21:39 stderr.txt
[2025-07-25 21:39:20] No HITS result produced
[2025-07-25 21:39:20]  *** Contents of shared directory: ***
[2025-07-25 21:39:20] total 224376
[2025-07-25 21:39:20] -rw-r--r--. 2 boinc boinc 229079792 Jul 25 21:36 ATLAS.root_0
[2025-07-25 21:39:20] -rw-r--r--. 2 boinc boinc     15095 Jul 25 21:36 start_atlas.sh
[2025-07-25 21:39:20] -rw-r--r--. 2 boinc boinc    542896 Jul 25 21:36 input.tar.gz
[2025-07-25 21:39:20] -rw-------. 1 boinc boinc    112640 Jul 25 21:39 result.tar.gz
21:39:22 (121892): run_atlas exited; CPU time 20.591801
21:39:22 (121892): called boinc_finish(0)

</stderr_txt>
]]>

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