Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
15:42:27 (5383): wrapper (7.7.26015): starting
15:42:27 (5383): wrapper: running run_atlas (--nthreads 8)
[2025-07-26 15:42:27] Arguments: --nthreads 8
[2025-07-26 15:42:27] Threads: 8
[2025-07-26 15:42:27] Checking for CVMFS
[2025-07-26 15:42:27] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-26 15:42:28] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-26 15:42:28] Running cvmfs_config stat atlas.cern.ch
[2025-07-26 15:42:29] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-26 15:42:29] 2.11.2.0 9794 108150 137824 148778 0 109 16555705 25165825 4362 130560 0 76456941 99.881 45387489 3377 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-07-26 15:42:29] CVMFS is ok
[2025-07-26 15:42:29] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-26 15:42:29] Checking for apptainer binary...
[2025-07-26 15:42:29] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-26 15:42:29] Running /usr/bin/apptainer --version
[2025-07-26 15:42:29] apptainer version 1.3.2-1.el7
[2025-07-26 15:42:29] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-26 15:42:30] cg-vwn292.simple-grid.lan
[2025-07-26 15:42:30] apptainer works
[2025-07-26 15:42:30] Set ATHENA_PROC_NUMBER=8
[2025-07-26 15:42:30] Set ATHENA_CORE_NUMBER=8
[2025-07-26 15:42:30] Starting ATLAS job with PandaID=6744935269
[2025-07-26 15:42:30] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/7 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-26 22:20:14]  *** The last 200 lines of the pilot log: ***
[2025-07-26 22:20:14] 2025-07-26 18:11:42,188 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-26 22:20:14] 2025-07-26 18:11:42,188 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-26 22:20:14] 2025-07-26 18:11:42,193 | INFO     | fitting pss+swap vs Time
[2025-07-26 22:20:14] 2025-07-26 18:11:42,194 | INFO     | sum of square deviations: 5576683165.5
[2025-07-26 22:20:14] 2025-07-26 18:11:42,197 | INFO     | sum of deviations: 11757406265.000004
[2025-07-26 22:20:14] 2025-07-26 18:11:42,197 | INFO     | mean x: 1753545386.5
[2025-07-26 22:20:14] 2025-07-26 18:11:42,197 | INFO     | mean y: 2494168.0305343512
[2025-07-26 22:20:14] 2025-07-26 18:11:42,197 | INFO     | -- intersect: -3694532344.206053
[2025-07-26 22:20:14] 2025-07-26 18:11:42,197 | INFO     | intersect: -3694532344.206053
[2025-07-26 22:20:14] 2025-07-26 18:11:42,198 | INFO     | chi2: 2.366886977141031
[2025-07-26 22:20:14] 2025-07-26 18:11:42,198 | INFO     | sum of square deviations: 5263458688.0
[2025-07-26 22:20:14] 2025-07-26 18:11:42,200 | INFO     | sum of deviations: 28833538010.999996
[2025-07-26 22:20:14] 2025-07-26 18:11:42,201 | INFO     | mean x: 1753545234.0
[2025-07-26 22:20:14] 2025-07-26 18:11:42,201 | INFO     | mean y: 2502349.712062257
[2025-07-26 22:20:14] 2025-07-26 18:11:42,201 | INFO     | -- intersect: -9603522159.194824
[2025-07-26 22:20:14] 2025-07-26 18:11:42,201 | INFO     | intersect: -9603522159.194824
[2025-07-26 22:20:14] 2025-07-26 18:11:42,201 | INFO     | chi2: 1.5878489350305924
[2025-07-26 22:20:14] 2025-07-26 18:11:42,201 | INFO     | current chi2=1.5878489350305924 (change=32.914036438336424 %)
[2025-07-26 22:20:14] 2025-07-26 18:11:42,202 | INFO     | sum of square deviations: 4962187923.0
[2025-07-26 22:20:14] 2025-07-26 18:11:42,204 | INFO     | sum of deviations: 28054656888.00001
[2025-07-26 22:20:14] 2025-07-26 18:11:42,204 | INFO     | mean x: 1753545081.5
[2025-07-26 22:20:14] 2025-07-26 18:11:42,204 | INFO     | mean y: 2501955.388888889
[2025-07-26 22:20:14] 2025-07-26 18:11:42,205 | INFO     | -- intersect: -9911492911.895485
[2025-07-26 22:20:14] 2025-07-26 18:11:42,205 | INFO     | intersect: -9911492911.895485
[2025-07-26 22:20:14] 2025-07-26 18:11:42,205 | INFO     | chi2: 1.5885387931696653
[2025-07-26 22:20:14] 2025-07-26 18:11:42,205 | INFO     | current chi2=1.5885387931696653 (change=-0.04344608128981494 %)
[2025-07-26 22:20:14] 2025-07-26 18:11:42,205 | INFO     | right removable region: 251
[2025-07-26 22:20:14] 2025-07-26 18:11:42,206 | INFO     | sum of square deviations: 5263458688.0
[2025-07-26 22:20:14] 2025-07-26 18:11:42,208 | INFO     | sum of deviations: -28992308567.0
[2025-07-26 22:20:14] 2025-07-26 18:11:42,208 | INFO     | mean x: 1753545539.0
[2025-07-26 22:20:14] 2025-07-26 18:11:42,208 | INFO     | mean y: 2513844.852140078
[2025-07-26 22:20:14] 2025-07-26 18:11:42,208 | INFO     | -- intersect: 9661435167.609243
[2025-07-26 22:20:14] 2025-07-26 18:11:42,209 | INFO     | intersect: 9661435167.609243
[2025-07-26 22:20:14] 2025-07-26 18:11:42,209 | INFO     | chi2: 0.9265382482595257
[2025-07-26 22:20:14] 2025-07-26 18:11:42,209 | INFO     | current chi2=0.9265382482595257 (change=60.85414059869079 %)
[2025-07-26 22:20:14] 2025-07-26 18:11:42,210 | INFO     | sum of square deviations: 4962187923.0
[2025-07-26 22:20:14] 2025-07-26 18:11:42,212 | INFO     | sum of deviations: -26280210686.0
[2025-07-26 22:20:14] 2025-07-26 18:11:42,212 | INFO     | mean x: 1753545691.5
[2025-07-26 22:20:14] 2025-07-26 18:11:42,212 | INFO     | mean y: 2512445.5
[2025-07-26 22:20:14] 2025-07-26 18:11:42,212 | INFO     | -- intersect: 9289454200.879295
[2025-07-26 22:20:14] 2025-07-26 18:11:42,212 | INFO     | intersect: 9289454200.879295
[2025-07-26 22:20:14] 2025-07-26 18:11:42,213 | INFO     | chi2: 0.911371439261361
[2025-07-26 22:20:14] 2025-07-26 18:11:42,213 | INFO     | current chi2=0.911371439261361 (change=1.6369328548125335 %)
[2025-07-26 22:20:14] 2025-07-26 18:11:42,213 | INFO     | left removable region: 20
[2025-07-26 22:20:14] 2025-07-26 18:11:42,213 | INFO     | sum of square deviations: 3822136780.0
[2025-07-26 22:20:14] 2025-07-26 18:11:42,215 | INFO     | sum of deviations: 7048931799.0
[2025-07-26 22:20:14] 2025-07-26 18:11:42,216 | INFO     | mean x: 1753545661.0
[2025-07-26 22:20:14] 2025-07-26 18:11:42,216 | INFO     | mean y: 2511732.4545454546
[2025-07-26 22:20:14] 2025-07-26 18:11:42,216 | INFO     | -- intersect: -3231444685.7198386
[2025-07-26 22:20:14] 2025-07-26 18:11:42,216 | INFO     | intersect: -3231444685.7198386
[2025-07-26 22:20:14] 2025-07-26 18:11:42,216 | INFO     | chi2: 0.0365427059687217
[2025-07-26 22:20:14] 2025-07-26 18:11:42,217 | INFO     | -- intersect: -3231444685.7198386
[2025-07-26 22:20:14] 2025-07-26 18:11:42,217 | INFO     | current memory leak: 1.84 B/s (using 231 data points, chi2=0.04)
[2025-07-26 22:20:14] 2025-07-26 18:11:42,217 | INFO     | could have reported an average CPU frequency of 1999 MHz (12 samples)
[2025-07-26 22:20:14] 2025-07-26 18:11:42,218 | INFO     | ..............................
[2025-07-26 22:20:14] 2025-07-26 18:11:42,218 | INFO     | . Timing measurements:
[2025-07-26 22:20:14] 2025-07-26 18:11:42,218 | INFO     | . get job = 0 s
[2025-07-26 22:20:14] 2025-07-26 18:11:42,218 | INFO     | . initial setup = 2 s
[2025-07-26 22:20:14] 2025-07-26 18:11:42,218 | INFO     | . payload setup = 12 s
[2025-07-26 22:20:14] 2025-07-26 18:11:42,218 | INFO     | . stage-in = 0 s
[2025-07-26 22:20:14] 2025-07-26 18:11:42,218 | INFO     | . payload execution = 15998 s
[2025-07-26 22:20:14] 2025-07-26 18:11:42,218 | INFO     | . stage-out = 3 s
[2025-07-26 22:20:14] 2025-07-26 18:11:42,218 | INFO     | . log creation = 1 s
[2025-07-26 22:20:14] 2025-07-26 18:11:42,218 | INFO     | ..............................
[2025-07-26 22:20:14] 2025-07-26 18:11:42,336 | INFO     | 
[2025-07-26 22:20:14] 2025-07-26 18:11:42,337 | INFO     | job summary report
[2025-07-26 22:20:14] 2025-07-26 18:11:42,337 | INFO     | --------------------------------------------------
[2025-07-26 22:20:14] 2025-07-26 18:11:42,337 | INFO     | PanDA job id: 6744935269
[2025-07-26 22:20:14] 2025-07-26 18:11:42,337 | INFO     | task id: 45743349
[2025-07-26 22:20:14] 2025-07-26 18:11:42,337 | INFO     | errors: (none)
[2025-07-26 22:20:14] 2025-07-26 18:11:42,337 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-26 22:20:14] 2025-07-26 18:11:42,337 | INFO     | pilot state: finished 
[2025-07-26 22:20:14] 2025-07-26 18:11:42,337 | INFO     | transexitcode: 0
[2025-07-26 22:20:14] 2025-07-26 18:11:42,337 | INFO     | exeerrorcode: 0
[2025-07-26 22:20:14] 2025-07-26 18:11:42,337 | INFO     | exeerrordiag: 
[2025-07-26 22:20:14] 2025-07-26 18:11:42,338 | INFO     | exitcode: 0
[2025-07-26 22:20:14] 2025-07-26 18:11:42,338 | INFO     | exitmsg: OK
[2025-07-26 22:20:14] 2025-07-26 18:11:42,338 | INFO     | cpuconsumptiontime: 62227 s
[2025-07-26 22:20:14] 2025-07-26 18:11:42,338 | INFO     | nevents: 400
[2025-07-26 22:20:14] 2025-07-26 18:11:42,338 | INFO     | neventsw: 0
[2025-07-26 22:20:14] 2025-07-26 18:11:42,338 | INFO     | pid: 15936
[2025-07-26 22:20:14] 2025-07-26 18:11:42,338 | INFO     | pgrp: 15936
[2025-07-26 22:20:14] 2025-07-26 18:11:42,338 | INFO     | corecount: 8
[2025-07-26 22:20:14] 2025-07-26 18:11:42,338 | INFO     | event service: False
[2025-07-26 22:20:14] 2025-07-26 18:11:42,338 | INFO     | sizes: {0: 2396645, 1: 2397501, 2: 2397501, 11: 2397791, 13: 2397819, 16015: 2428943, 16020: 2437997, 16110: 2438135}
[2025-07-26 22:20:14] 2025-07-26 18:11:42,338 | INFO     | --------------------------------------------------
[2025-07-26 22:20:14] 2025-07-26 18:11:42,339 | INFO     | 
[2025-07-26 22:20:14] 2025-07-26 18:11:42,339 | INFO     | executing command: ls -lF /var/lib/boinc/slots/7
[2025-07-26 22:20:14] 2025-07-26 18:11:42,772 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-26 22:20:14] 2025-07-26 18:11:42,772 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-26 22:20:14] 2025-07-26 18:11:42,773 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-26 22:20:14] 2025-07-26 18:11:42,773 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-26 22:20:14] 2025-07-26 18:11:42,773 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-26 22:20:14] 2025-07-26 18:11:42,773 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-26 22:20:14] 2025-07-26 18:11:42,773 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-26 22:20:14] 2025-07-26 18:11:42,773 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-26 22:20:14] 2025-07-26 18:11:42,773 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-26 22:20:14] 2025-07-26 18:11:42,773 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-26 22:20:14] 2025-07-26 18:11:42,773 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-26 22:20:14] 2025-07-26 18:11:42,773 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-26 22:20:14] 2025-07-26 18:11:42,773 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-26 22:20:14] 2025-07-26 18:11:42,773 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-26 22:20:14] 2025-07-26 18:11:42,774 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-26 22:20:14] 2025-07-26 18:11:42,774 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-26 22:20:14] 2025-07-26 18:11:42,774 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-26 22:20:14] 2025-07-26 18:11:42,774 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-26 22:20:14] 2025-07-26 18:11:42,774 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-26 22:20:14] 2025-07-26 18:11:42,774 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-26 22:20:14] 2025-07-26 18:11:42,774 | INFO     | job 6744935269 has completed (purged errors)
[2025-07-26 22:20:14] 2025-07-26 18:11:42,774 | INFO     | overall cleanup function is called
[2025-07-26 22:20:14] 2025-07-26 18:11:43,784 | INFO     | --- collectZombieJob: --- 10, [15936]
[2025-07-26 22:20:14] 2025-07-26 18:11:43,784 | INFO     | zombie collector waiting for pid 15936
[2025-07-26 22:20:14] 2025-07-26 18:11:43,784 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-26 22:20:14] 2025-07-26 18:11:43,784 | INFO     | collected zombie processes
[2025-07-26 22:20:14] 2025-07-26 18:11:43,784 | INFO     | will attempt to kill all subprocesses of pid=15936
[2025-07-26 22:20:14] 2025-07-26 18:11:43,910 | INFO     | process IDs to be killed: [15936] (in reverse order)
[2025-07-26 22:20:14] 2025-07-26 18:11:44,434 | WARNING  | found no corresponding commands to process id(s)
[2025-07-26 22:20:14] 2025-07-26 18:11:44,435 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-26 22:20:14] 2025-07-26 18:11:44,438 | INFO     | did not find any defunct processes belonging to 15936
[2025-07-26 22:20:14] 2025-07-26 18:11:44,442 | INFO     | did not find any defunct processes belonging to 15936
[2025-07-26 22:20:14] 2025-07-26 18:11:44,442 | INFO     | ready for new job
[2025-07-26 22:20:14] 2025-07-26 18:11:44,442 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-26 22:20:14] 2025-07-26 18:11:44,444 | INFO     | ***************************************
[2025-07-26 22:20:14] 2025-07-26 18:11:44,444 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-26 22:20:14] 2025-07-26 18:11:44,444 | INFO     | ***************************************
[2025-07-26 22:20:14] 2025-07-26 18:11:44,445 | INFO     | 
[2025-07-26 22:20:14] 2025-07-26 18:11:44,445 | INFO     | pilot is running in a VM
[2025-07-26 22:20:14] 2025-07-26 18:11:44,445 | INFO     | architecture information:
[2025-07-26 22:20:14] 2025-07-26 18:11:44,446 | INFO     | executing command: cat /etc/os-release
[2025-07-26 22:20:14] 2025-07-26 18:11:44,593 | INFO     | cat /etc/os-release:
[2025-07-26 22:20:14] NAME="CentOS Linux"
[2025-07-26 22:20:14] VERSION="7 (Core)"
[2025-07-26 22:20:14] ID="centos"
[2025-07-26 22:20:14] ID_LIKE="rhel fedora"
[2025-07-26 22:20:14] VERSION_ID="7"
[2025-07-26 22:20:14] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-26 22:20:14] ANSI_COLOR="0;31"
[2025-07-26 22:20:14] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-26 22:20:14] HOME_URL="https://www.centos.org/"
[2025-07-26 22:20:14] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-26 22:20:14] 
[2025-07-26 22:20:14] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-26 22:20:14] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-26 22:20:14] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-26 22:20:14] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-26 22:20:14] 
[2025-07-26 22:20:14] 2025-07-26 18:11:44,594 | INFO     | ***************************************
[2025-07-26 22:20:14] 2025-07-26 18:11:45,097 | INFO     | executing command: df -mP /var/lib/boinc/slots/7
[2025-07-26 22:20:14] 2025-07-26 18:11:45,226 | INFO     | sufficient remaining disk space (496590913536 B)
[2025-07-26 22:20:14] 2025-07-26 18:11:45,227 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-26 22:20:14] 2025-07-26 18:11:45,227 | INFO     | current server update state: UPDATING_FINAL
[2025-07-26 22:20:14] 2025-07-26 18:11:45,227 | INFO     | update_server=False
[2025-07-26 22:20:14] 2025-07-26 18:11:45,227 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-26 22:20:14] 2025-07-26 18:11:45,228 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-26 22:20:14] 2025-07-26 18:11:45,228 | INFO     | aborting loop
[2025-07-26 22:20:14] 2025-07-26 18:11:45,581 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-26 22:20:14] 2025-07-26 18:11:46,233 | INFO     | [job] retrieve thread has finished
[2025-07-26 22:20:14] 2025-07-26 18:11:46,234 | INFO     | [job] job monitor thread has finished
[2025-07-26 22:20:14] 2025-07-26 18:11:46,285 | INFO     | all payload control threads have been joined
[2025-07-26 22:20:14] 2025-07-26 18:11:46,285 | INFO     | all data control threads have been joined
[2025-07-26 22:20:14] 2025-07-26 18:11:46,383 | INFO     | [payload] validate_post thread has finished
[2025-07-26 22:20:14] 2025-07-26 18:11:46,457 | INFO     | [job] create_data_payload thread has finished
[2025-07-26 22:20:14] 2025-07-26 18:11:46,798 | INFO     | all job control threads have been joined
[2025-07-26 22:20:14] 2025-07-26 18:11:47,291 | INFO     | [data] control thread has finished
[2025-07-26 22:20:14] 2025-07-26 18:11:47,291 | INFO     | [payload] control thread has finished
[2025-07-26 22:20:14] 2025-07-26 18:11:47,304 | INFO     | [job] validate thread has finished
[2025-07-26 22:20:14] 2025-07-26 18:11:47,304 | INFO     | [data] copytool_in thread has finished
[2025-07-26 22:20:14] 2025-07-26 18:11:47,354 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-26 22:20:14] 2025-07-26 18:11:47,362 | INFO     | [payload] validate_pre thread has finished
[2025-07-26 22:20:14] 2025-07-26 18:11:47,588 | INFO     | [data] copytool_out thread has finished
[2025-07-26 22:20:14] 2025-07-26 18:11:47,684 | INFO     | [payload] execute_payloads thread has finished
[2025-07-26 22:20:14] 2025-07-26 18:11:47,805 | INFO     | [job] control thread has finished
[2025-07-26 22:20:14] 2025-07-26 18:11:47,827 | INFO     | [payload] failed_post thread has finished
[2025-07-26 22:20:14] 2025-07-26 18:11:48,360 | INFO     | [job] queue monitor thread has finished
[2025-07-26 22:20:14] 2025-07-26 18:11:48,657 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-26 22:20:14] 2025-07-26 18:11:52,666 | INFO     | [data] queue_monitor thread has finished
[2025-07-26 22:20:14] 2025-07-26 18:11:55,701 | INFO     | job.realtimelogging is not enabled
[2025-07-26 22:20:14] 2025-07-26 18:11:56,707 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-26 22:20:14] 2025-07-26 18:11:57,019 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140342280963904)>', '<ExcThread(monitor, started 140341395052288)>']
[2025-07-26 22:20:14] 2025-07-26 18:12:02,045 | INFO     | all workflow threads have been joined
[2025-07-26 22:20:14] 2025-07-26 18:12:02,045 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-26 22:20:14] 2025-07-26 18:12:02,045 | INFO     | traces error code: 0
[2025-07-26 22:20:14] 2025-07-26 18:12:02,045 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-26 22:20:14] 2025-07-26 18:12:15,974 | INFO     | PID=9372 has CPU usage=1.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-07-26 22:20:14] 2025-07-26 18:12:15,974 | INFO     | .. there are 9 such processes running
[2025-07-26 22:20:14] 2025-07-26 18:12:15,974 | INFO     | found 0 job(s) in 20 queues
[2025-07-26 22:20:14] 2025-07-26 18:12:15,974 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-26 22:20:14] 2025-07-26 18:12:15,975 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-26 22:20:14] 2025-07-26 18:12:15,975 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-26 22:20:14] 2025-07-26 18:12:15,975 | INFO     | [monitor] control thread has ended
[2025-07-26 22:20:14] 2025-07-26 18:12:16,345 [wrapper] ==== pilot stdout END ====
[2025-07-26 22:20:14] 2025-07-26 18:12:16,461 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-26 22:20:14] 2025-07-26 18:12:16,479 [wrapper] pilotpid: 9372
[2025-07-26 22:20:14] 2025-07-26 18:12:16,516 [wrapper] Pilot exit status: 0
[2025-07-26 22:20:14] 2025-07-26 18:12:16,904 [wrapper] pandaids: 6744935269
[2025-07-26 22:20:14] 2025-07-26 18:12:17,786 [wrapper] cleanup supervisor_pilot 25634 9373
[2025-07-26 22:20:14] 2025-07-26 18:12:17,856 [wrapper] Test setup, not cleaning
[2025-07-26 22:20:14] 2025-07-26 18:12:17,961 [wrapper] apfmon messages muted
[2025-07-26 22:20:14] 2025-07-26 18:12:18,044 [wrapper] ==== wrapper stdout END ====
[2025-07-26 22:20:14] 2025-07-26 18:12:18,141 [wrapper] ==== wrapper stderr END ====
[2025-07-26 22:20:14]  *** Error codes and diagnostics ***
[2025-07-26 22:20:14]     "exeErrorCode": 0,
[2025-07-26 22:20:14]     "exeErrorDiag": "",
[2025-07-26 22:20:14]     "pilotErrorCode": 0,
[2025-07-26 22:20:14]     "pilotErrorDiag": "",
[2025-07-26 22:20:14]  *** Listing of results directory ***
[2025-07-26 22:20:14] total 436728
[2025-07-26 22:20:14] -rw-r--r--. 1 boinc boinc    530466 Jul 24 23:32 pilot3.tar.gz
[2025-07-26 22:20:14] -rw-r--r--. 1 boinc boinc      5112 Jul 25 00:01 queuedata.json
[2025-07-26 22:20:14] -rwx------. 1 boinc boinc     36292 Jul 25 00:03 runpilot2-wrapper.sh
[2025-07-26 22:20:14] -rw-r--r--. 1 boinc boinc       100 Jul 26 15:42 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-26 22:20:14] -rwxr-xr-x. 1 boinc boinc      7986 Jul 26 15:42 run_atlas
[2025-07-26 22:20:14] -rw-r--r--. 1 boinc boinc       105 Jul 26 15:42 job.xml
[2025-07-26 22:20:14] -rw-r--r--. 1 boinc boinc      6390 Jul 26 15:42 init_data.xml
[2025-07-26 22:20:14] -rw-r--r--. 2 boinc boinc 228379159 Jul 26 15:42 EVNT.45743347._000613.pool.root.1
[2025-07-26 22:20:14] -rw-r--r--. 2 boinc boinc     15095 Jul 26 15:42 start_atlas.sh
[2025-07-26 22:20:14] drwxrwx--x. 2 boinc boinc        68 Jul 26 15:42 shared
[2025-07-26 22:20:14] -rw-r--r--. 2 boinc boinc    542886 Jul 26 15:42 input.tar.gz
[2025-07-26 22:20:14] -rw-r--r--. 1 boinc boinc         0 Jul 26 15:42 boinc_lockfile
[2025-07-26 22:20:14] -rw-r--r--. 1 boinc boinc      2562 Jul 26 15:42 pandaJob.out
[2025-07-26 22:20:14] -rw-------. 1 boinc boinc    980133 Jul 26 15:42 agis_schedconf.cvmfs.json
[2025-07-26 22:20:14] drwx------. 4 boinc boinc      4096 Jul 26 15:42 pilot3
[2025-07-26 22:20:14] -rw-------. 1 boinc boinc 211406361 Jul 26 20:08 HITS.45743349._011114.pool.root.1
[2025-07-26 22:20:14] -rw-r--r--. 1 boinc boinc       531 Jul 26 20:09 boinc_task_state.xml
[2025-07-26 22:20:14] -rw-------. 1 boinc boinc      1018 Jul 26 20:10 memory_monitor_summary.json
[2025-07-26 22:20:14] -rw-------. 1 boinc boinc   1593052 Jul 26 20:10 agis_ddmendpoints.agis.ALL.json
[2025-07-26 22:20:14] -rw-------. 1 boinc boinc    401857 Jul 26 20:10 log.45743349._011114.job.log.tgz.1
[2025-07-26 22:20:14] -rw-------. 1 boinc boinc        95 Jul 26 20:11 pilot_heartbeat.json
[2025-07-26 22:20:14] -rw-------. 1 boinc boinc      7777 Jul 26 20:11 heartbeat.json
[2025-07-26 22:20:14] -rw-------. 1 boinc boinc       819 Jul 26 20:12 pilotlog.txt
[2025-07-26 22:20:14] -rw-------. 1 boinc boinc   1378897 Jul 26 20:12 log.45743349._011114.job.log.1
[2025-07-26 22:20:14] -rw-------. 1 boinc boinc       357 Jul 26 20:12 output.list
[2025-07-26 22:20:14] -rw-r--r--. 1 boinc boinc       620 Jul 26 20:12 runtime_log
[2025-07-26 22:20:14] -rw-------. 1 boinc boinc   1802240 Jul 26 20:12 result.tar.gz
[2025-07-26 22:20:14] -rw-r--r--. 1 boinc boinc      8660 Jul 26 20:12 runtime_log.err
[2025-07-26 22:20:14] -rw-------. 1 boinc boinc       657 Jul 26 20:12 ANZLDmyCJz7n9Rq4apOajLDm4fhM0noT9bVof3QYDmhwxKDmhr2g1n.diag
[2025-07-26 22:20:14] -rw-r--r--. 1 boinc boinc      8192 Jul 26 22:20 boinc_mmap_file
[2025-07-26 22:20:14] -rw-r--r--. 1 boinc boinc        28 Jul 26 22:20 wrapper_checkpoint.txt
[2025-07-26 22:20:14] -rw-r--r--. 1 boinc boinc     20548 Jul 26 22:20 stderr.txt
[2025-07-26 22:20:14] HITS file was successfully produced:
[2025-07-26 22:20:14] -rw-------. 1 boinc boinc 211406361 Jul 26 20:08 shared/HITS.pool.root.1
[2025-07-26 22:20:14]  *** Contents of shared directory: ***
[2025-07-26 22:20:14] total 431788
[2025-07-26 22:20:14] -rw-r--r--. 2 boinc boinc 228379159 Jul 26 15:42 ATLAS.root_0
[2025-07-26 22:20:14] -rw-r--r--. 2 boinc boinc     15095 Jul 26 15:42 start_atlas.sh
[2025-07-26 22:20:14] -rw-r--r--. 2 boinc boinc    542886 Jul 26 15:42 input.tar.gz
[2025-07-26 22:20:14] -rw-------. 1 boinc boinc 211406361 Jul 26 20:08 HITS.pool.root.1
[2025-07-26 22:20:14] -rw-------. 1 boinc boinc   1802240 Jul 26 20:12 result.tar.gz
22:20:16 (5383): run_atlas exited; CPU time 62429.983333
22:20:16 (5383): called boinc_finish(0)

</stderr_txt>
]]>

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