Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:34:55 (2135728): wrapper (7.7.26015): starting
00:34:55 (2135728): wrapper: running run_atlas (--nthreads 8)
[2025-07-26 00:34:55] Arguments: --nthreads 8
[2025-07-26 00:34:55] Threads: 8
[2025-07-26 00:34:55] Checking for CVMFS
[2025-07-26 00:34:55] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-26 00:34:55] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-26 00:34:55] Running cvmfs_config stat atlas.cern.ch
[2025-07-26 00:34:56] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-26 00:34:56] 2.12.6.0 1904412 16467 353896 148764 2 377 31467797 32503808 32056 16776704 0 97720154 99.537 144315431 18715 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-07-26 00:34:56] CVMFS is ok
[2025-07-26 00:34:56] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-26 00:34:56] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-26 00:34:56] Further information can be found at the LHC@home message board.
[2025-07-26 00:34:56] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-26 00:34:56] Checking for apptainer binary...
[2025-07-26 00:34:56] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-26 00:34:56] Running /usr/bin/apptainer --version
[2025-07-26 00:34:56] apptainer version 1.4.1-1.el9
[2025-07-26 00:34:56] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-26 00:34:56] c7-7-36.aglt2.org
[2025-07-26 00:34:56] apptainer works
[2025-07-26 00:34:56] Set ATHENA_PROC_NUMBER=8
[2025-07-26 00:34:56] Set ATHENA_CORE_NUMBER=8
[2025-07-26 00:34:56] Starting ATLAS job with PandaID=6741890671
[2025-07-26 00:34:56] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-26 06:08:07]  *** The last 200 lines of the pilot log: ***
[2025-07-26 06:08:07] 2025-07-26 10:07:32,108 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-26 06:08:07] 2025-07-26 10:07:32,113 | INFO     | fitting pss+swap vs Time
[2025-07-26 06:08:07] 2025-07-26 10:07:32,116 | INFO     | sum of square deviations: 10644499771.212275
[2025-07-26 06:08:07] 2025-07-26 10:07:32,119 | INFO     | sum of deviations: -624249594.4584694
[2025-07-26 06:08:07] 2025-07-26 10:07:32,120 | INFO     | mean x: 1753514540.0492308
[2025-07-26 06:08:07] 2025-07-26 10:07:32,120 | INFO     | mean y: 2228944.966153846
[2025-07-26 06:08:07] 2025-07-26 10:07:32,143 | INFO     | sufficient remaining disk space (95225380864 B)
[2025-07-26 06:08:07] 2025-07-26 10:07:32,143 | INFO     | work directory size check will use 2537553920 B as a max limit (10% grace limit added)
[2025-07-26 06:08:07] 2025-07-26 10:07:32,144 | INFO     | size of work directory /tmp/boinchome/slots/2/PanDA_Pilot-6741890671: 3614952 B (within 2537553920 B limit)
[2025-07-26 06:08:07] 2025-07-26 10:07:32,144 | INFO     | pfn file=/tmp/boinchome/slots/2/PanDA_Pilot-6741890671/HITS.45697472._004786.pool.root.1 does not exist (skip from workdir size calculation)
[2025-07-26 06:08:07] 2025-07-26 10:07:32,144 | INFO     | total size of present files: 0 B (workdir size: 3614952 B)
[2025-07-26 06:08:07] 2025-07-26 10:07:32,144 | INFO     | output file size check: skipping output file /tmp/boinchome/slots/2/PanDA_Pilot-6741890671/HITS.45697472._004786.pool.root.1 since it does not exist
[2025-07-26 06:08:07] 2025-07-26 10:07:32,120 | INFO     | -- intersect: 105064283.7824651
[2025-07-26 06:08:07] 2025-07-26 10:07:32,169 | INFO     | intersect: 105064283.7824651
[2025-07-26 06:08:07] 2025-07-26 10:07:32,169 | INFO     | chi2: 3.6554563675887994
[2025-07-26 06:08:07] 2025-07-26 10:07:32,170 | INFO     | sum of square deviations: 10160737441.200008
[2025-07-26 06:08:07] 2025-07-26 10:07:32,187 | INFO     | sum of deviations: 17581993120.100002
[2025-07-26 06:08:07] 2025-07-26 10:07:32,188 | INFO     | mean x: 1753514387.55
[2025-07-26 06:08:07] 2025-07-26 10:07:32,188 | INFO     | mean y: 2234616.74375
[2025-07-26 06:08:07] 2025-07-26 10:07:32,188 | INFO     | -- intersect: -3032021319.5320063
[2025-07-26 06:08:07] 2025-07-26 10:07:32,188 | INFO     | intersect: -3032021319.5320063
[2025-07-26 06:08:07] 2025-07-26 10:07:32,189 | INFO     | chi2: 3.0099745168072625
[2025-07-26 06:08:07] 2025-07-26 10:07:32,189 | INFO     | current chi2=3.0099745168072625 (change=17.658037352181765 %)
[2025-07-26 06:08:07] 2025-07-26 10:07:32,189 | INFO     | right removable region: 319
[2025-07-26 06:08:07] 2025-07-26 10:07:32,189 | INFO     | sum of square deviations: 10160727681.200006
[2025-07-26 06:08:07] 2025-07-26 10:07:32,196 | INFO     | sum of deviations: -69125283248.29996
[2025-07-26 06:08:07] 2025-07-26 10:07:32,196 | INFO     | mean x: 1753514692.55
[2025-07-26 06:08:07] 2025-07-26 10:07:32,196 | INFO     | mean y: 2250462.01875
[2025-07-26 06:08:07] 2025-07-26 10:07:32,197 | INFO     | -- intersect: 11931730673.052109
[2025-07-26 06:08:07] 2025-07-26 10:07:32,197 | INFO     | intersect: 11931730673.052109
[2025-07-26 06:08:07] 2025-07-26 10:07:32,197 | INFO     | chi2: 1.278410070616362
[2025-07-26 06:08:07] 2025-07-26 10:07:32,214 | INFO     | current chi2=1.278410070616362 (change=65.02734701058345 %)
[2025-07-26 06:08:07] 2025-07-26 10:07:32,215 | INFO     | sum of square deviations: 9691839591.18725
[2025-07-26 06:08:07] 2025-07-26 10:07:32,217 | INFO     | sum of deviations: -76684313048.29523
[2025-07-26 06:08:07] 2025-07-26 10:07:32,217 | INFO     | mean x: 1753514845.0507936
[2025-07-26 06:08:07] 2025-07-26 10:07:32,217 | INFO     | mean y: 2252895.580952381
[2025-07-26 06:08:07] 2025-07-26 10:07:32,217 | INFO     | -- intersect: 13876510723.267073
[2025-07-26 06:08:07] 2025-07-26 10:07:32,217 | INFO     | intersect: 13876510723.267073
[2025-07-26 06:08:07] 2025-07-26 10:07:32,218 | INFO     | chi2: 1.1979396770339839
[2025-07-26 06:08:07] 2025-07-26 10:07:32,218 | INFO     | current chi2=1.1979396770339839 (change=6.294568185275695 %)
[2025-07-26 06:08:07] 2025-07-26 10:07:32,218 | INFO     | left removable region: 20
[2025-07-26 06:08:07] 2025-07-26 10:07:32,218 | INFO     | sum of square deviations: 8288721007.143836
[2025-07-26 06:08:07] 2025-07-26 10:07:32,221 | INFO     | sum of deviations: -34179743119.337822
[2025-07-26 06:08:07] 2025-07-26 10:07:32,221 | INFO     | mean x: 1753514967.0535116
[2025-07-26 06:08:07] 2025-07-26 10:07:32,221 | INFO     | mean y: 2250885.08361204
[2025-07-26 06:08:07] 2025-07-26 10:07:32,221 | INFO     | -- intersect: 7233124149.866802
[2025-07-26 06:08:07] 2025-07-26 10:07:32,221 | INFO     | intersect: 7233124149.866802
[2025-07-26 06:08:07] 2025-07-26 10:07:32,221 | INFO     | chi2: 0.44740390327882545
[2025-07-26 06:08:07] 2025-07-26 10:07:32,221 | INFO     | -- intersect: 7233124149.866802
[2025-07-26 06:08:07] 2025-07-26 10:07:32,222 | INFO     | current memory leak: -4.12 B/s (using 299 data points, chi2=0.45)
[2025-07-26 06:08:07] 2025-07-26 10:07:32,222 | INFO     | could have reported an average CPU frequency of 2949 MHz (14 samples)
[2025-07-26 06:08:07] 2025-07-26 10:07:32,222 | INFO     | ..............................
[2025-07-26 06:08:07] 2025-07-26 10:07:32,222 | INFO     | . Timing measurements:
[2025-07-26 06:08:07] 2025-07-26 10:07:32,223 | INFO     | . get job = 0 s
[2025-07-26 06:08:07] 2025-07-26 10:07:32,223 | INFO     | . initial setup = 6 s
[2025-07-26 06:08:07] 2025-07-26 10:07:32,223 | INFO     | . payload setup = 48 s
[2025-07-26 06:08:07] 2025-07-26 10:07:32,223 | INFO     | . stage-in = 0 s
[2025-07-26 06:08:07] 2025-07-26 10:07:32,223 | INFO     | . payload execution = 19790 s
[2025-07-26 06:08:07] 2025-07-26 10:07:32,223 | INFO     | . stage-out = 2 s
[2025-07-26 06:08:07] 2025-07-26 10:07:32,223 | INFO     | . log creation = 0 s
[2025-07-26 06:08:07] 2025-07-26 10:07:32,223 | INFO     | ..............................
[2025-07-26 06:08:07] 2025-07-26 10:07:32,363 | INFO     | 
[2025-07-26 06:08:07] 2025-07-26 10:07:32,363 | INFO     | job summary report
[2025-07-26 06:08:07] 2025-07-26 10:07:32,363 | INFO     | --------------------------------------------------
[2025-07-26 06:08:07] 2025-07-26 10:07:32,363 | INFO     | PanDA job id: 6741890671
[2025-07-26 06:08:07] 2025-07-26 10:07:32,363 | INFO     | task id: 45697472
[2025-07-26 06:08:07] 2025-07-26 10:07:32,363 | INFO     | errors: (none)
[2025-07-26 06:08:07] 2025-07-26 10:07:32,363 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-26 06:08:07] 2025-07-26 10:07:32,363 | INFO     | pilot state: finished 
[2025-07-26 06:08:07] 2025-07-26 10:07:32,363 | INFO     | transexitcode: 0
[2025-07-26 06:08:07] 2025-07-26 10:07:32,363 | INFO     | exeerrorcode: 0
[2025-07-26 06:08:07] 2025-07-26 10:07:32,364 | INFO     | exeerrordiag: 
[2025-07-26 06:08:07] 2025-07-26 10:07:32,364 | INFO     | exitcode: 0
[2025-07-26 06:08:07] 2025-07-26 10:07:32,364 | INFO     | exitmsg: OK
[2025-07-26 06:08:07] 2025-07-26 10:07:32,364 | INFO     | cpuconsumptiontime: 53270 s
[2025-07-26 06:08:07] 2025-07-26 10:07:32,364 | INFO     | nevents: 400
[2025-07-26 06:08:07] 2025-07-26 10:07:32,364 | INFO     | neventsw: 0
[2025-07-26 06:08:07] 2025-07-26 10:07:32,364 | INFO     | pid: 2150118
[2025-07-26 06:08:07] 2025-07-26 10:07:32,364 | INFO     | pgrp: 2150118
[2025-07-26 06:08:07] 2025-07-26 10:07:32,364 | INFO     | corecount: 8
[2025-07-26 06:08:07] 2025-07-26 10:07:32,364 | INFO     | event service: False
[2025-07-26 06:08:07] 2025-07-26 10:07:32,364 | INFO     | sizes: {0: 2397374, 1: 2397573, 12: 2397573, 15: 2397863, 22: 2397891, 19843: 2431104, 19846: 2440102, 19847: 2440158, 19859: 2440380}
[2025-07-26 06:08:07] 2025-07-26 10:07:32,364 | INFO     | --------------------------------------------------
[2025-07-26 06:08:07] 2025-07-26 10:07:32,365 | INFO     | 
[2025-07-26 06:08:07] 2025-07-26 10:07:32,365 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-07-26 06:08:07] 2025-07-26 10:07:32,513 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-26 06:08:07] 2025-07-26 10:07:32,513 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-26 06:08:07] 2025-07-26 10:07:32,513 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-26 06:08:07] 2025-07-26 10:07:32,513 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-26 06:08:07] 2025-07-26 10:07:32,513 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-26 06:08:07] 2025-07-26 10:07:32,514 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-26 06:08:07] 2025-07-26 10:07:32,514 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-26 06:08:07] 2025-07-26 10:07:32,514 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-26 06:08:07] 2025-07-26 10:07:32,514 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-26 06:08:07] 2025-07-26 10:07:32,514 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-26 06:08:07] 2025-07-26 10:07:32,514 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-26 06:08:07] 2025-07-26 10:07:32,514 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-26 06:08:07] 2025-07-26 10:07:32,514 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-26 06:08:07] 2025-07-26 10:07:32,514 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-26 06:08:07] 2025-07-26 10:07:32,514 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-26 06:08:07] 2025-07-26 10:07:32,514 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-26 06:08:07] 2025-07-26 10:07:32,514 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-26 06:08:07] 2025-07-26 10:07:32,514 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-26 06:08:07] 2025-07-26 10:07:32,514 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-26 06:08:07] 2025-07-26 10:07:32,515 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-26 06:08:07] 2025-07-26 10:07:32,515 | INFO     | job 6741890671 has completed (purged errors)
[2025-07-26 06:08:07] 2025-07-26 10:07:32,515 | INFO     | overall cleanup function is called
[2025-07-26 06:08:07] 2025-07-26 10:07:32,865 | INFO     | number of running child processes to parent process 2150118: 1
[2025-07-26 06:08:07] 2025-07-26 10:07:32,866 | INFO     | maximum number of monitored processes: 6
[2025-07-26 06:08:07] 2025-07-26 10:07:32,866 | INFO     | aborting job monitoring since job object (job id=6741890671) has expired
[2025-07-26 06:08:07] 2025-07-26 10:07:33,535 | INFO     | --- collectZombieJob: --- 10, [2150118]
[2025-07-26 06:08:07] 2025-07-26 10:07:33,535 | INFO     | zombie collector waiting for pid 2150118
[2025-07-26 06:08:07] 2025-07-26 10:07:33,536 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-26 06:08:07] 2025-07-26 10:07:33,536 | INFO     | collected zombie processes
[2025-07-26 06:08:07] 2025-07-26 10:07:33,536 | INFO     | will attempt to kill all subprocesses of pid=2150118
[2025-07-26 06:08:07] 2025-07-26 10:07:34,329 | INFO     | process IDs to be killed: [2150118] (in reverse order)
[2025-07-26 06:08:07] 2025-07-26 10:07:34,532 | WARNING  | found no corresponding commands to process id(s)
[2025-07-26 06:08:07] 2025-07-26 10:07:34,532 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-26 06:08:07] 2025-07-26 10:07:34,553 | INFO     | did not find any defunct processes belonging to 2150118
[2025-07-26 06:08:07] 2025-07-26 10:07:34,573 | INFO     | did not find any defunct processes belonging to 2150118
[2025-07-26 06:08:07] 2025-07-26 10:07:34,574 | INFO     | ready for new job
[2025-07-26 06:08:07] 2025-07-26 10:07:34,574 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-26 06:08:07] 2025-07-26 10:07:34,576 | INFO     | ***************************************
[2025-07-26 06:08:07] 2025-07-26 10:07:34,576 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-26 06:08:07] 2025-07-26 10:07:34,576 | INFO     | ***************************************
[2025-07-26 06:08:07] 2025-07-26 10:07:34,576 | INFO     | 
[2025-07-26 06:08:07] 2025-07-26 10:07:34,596 | INFO     | architecture information:
[2025-07-26 06:08:07] 2025-07-26 10:07:34,604 | INFO     | executing command: cat /etc/os-release
[2025-07-26 06:08:07] 2025-07-26 10:07:34,670 | INFO     | cat /etc/os-release:
[2025-07-26 06:08:07] NAME="CentOS Linux"
[2025-07-26 06:08:07] VERSION="7 (Core)"
[2025-07-26 06:08:07] ID="centos"
[2025-07-26 06:08:07] ID_LIKE="rhel fedora"
[2025-07-26 06:08:07] VERSION_ID="7"
[2025-07-26 06:08:07] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-26 06:08:07] ANSI_COLOR="0;31"
[2025-07-26 06:08:07] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-26 06:08:07] HOME_URL="https://www.centos.org/"
[2025-07-26 06:08:07] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-26 06:08:07] 
[2025-07-26 06:08:07] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-26 06:08:07] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-26 06:08:07] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-26 06:08:07] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-26 06:08:07] 
[2025-07-26 06:08:07] 2025-07-26 10:07:34,671 | INFO     | ***************************************
[2025-07-26 06:08:07] 2025-07-26 10:07:35,175 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-07-26 06:08:07] 2025-07-26 10:07:35,239 | INFO     | sufficient remaining disk space (95229575168 B)
[2025-07-26 06:08:07] 2025-07-26 10:07:35,239 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-26 06:08:07] 2025-07-26 10:07:35,239 | INFO     | current server update state: UPDATING_FINAL
[2025-07-26 06:08:07] 2025-07-26 10:07:35,240 | INFO     | update_server=False
[2025-07-26 06:08:07] 2025-07-26 10:07:35,240 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-26 06:08:07] 2025-07-26 10:07:35,240 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-26 06:08:07] 2025-07-26 10:07:35,241 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-26 06:08:07] 2025-07-26 10:07:35,346 | INFO     | all job control threads have been joined
[2025-07-26 06:08:07] 2025-07-26 10:07:35,378 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-07-26 06:08:07] 2025-07-26 10:07:35,378 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-07-26 06:08:07] 2025-07-26 10:07:35,379 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-26 06:08:07] 2025-07-26 10:07:35,379 | INFO     | will abort loop
[2025-07-26 06:08:07] 2025-07-26 10:07:35,817 | INFO     | all data control threads have been joined
[2025-07-26 06:08:07] 2025-07-26 10:07:36,248 | INFO     | [job] retrieve thread has finished
[2025-07-26 06:08:07] 2025-07-26 10:07:36,289 | INFO     | all payload control threads have been joined
[2025-07-26 06:08:07] 2025-07-26 10:07:36,355 | INFO     | [job] control thread has finished
[2025-07-26 06:08:07] 2025-07-26 10:07:36,386 | INFO     | [job] job monitor thread has finished
[2025-07-26 06:08:07] 2025-07-26 10:07:36,485 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-26 06:08:07] 2025-07-26 10:07:36,566 | INFO     | [payload] validate_post thread has finished
[2025-07-26 06:08:07] 2025-07-26 10:07:36,823 | INFO     | [data] control thread has finished
[2025-07-26 06:08:07] 2025-07-26 10:07:37,032 | INFO     | [job] create_data_payload thread has finished
[2025-07-26 06:08:07] 2025-07-26 10:07:37,247 | INFO     | [data] copytool_out thread has finished
[2025-07-26 06:08:07] 2025-07-26 10:07:37,256 | INFO     | [job] validate thread has finished
[2025-07-26 06:08:07] 2025-07-26 10:07:37,295 | INFO     | [payload] control thread has finished
[2025-07-26 06:08:07] 2025-07-26 10:07:37,378 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-26 06:08:07] 2025-07-26 10:07:37,515 | INFO     | [data] copytool_in thread has finished
[2025-07-26 06:08:07] 2025-07-26 10:07:37,712 | INFO     | [payload] execute_payloads thread has finished
[2025-07-26 06:08:07] 2025-07-26 10:07:37,717 | INFO     | [payload] validate_pre thread has finished
[2025-07-26 06:08:07] 2025-07-26 10:07:37,747 | INFO     | [payload] failed_post thread has finished
[2025-07-26 06:08:07] 2025-07-26 10:07:38,384 | INFO     | [job] queue monitor thread has finished
[2025-07-26 06:08:07] 2025-07-26 10:07:39,249 | INFO     | [data] queue_monitor thread has finished
[2025-07-26 06:08:07] 2025-07-26 10:07:40,771 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139845172082496)>', '<ExcThread(monitor, started 139844529415936)>']
[2025-07-26 06:08:07] 2025-07-26 10:07:45,797 | INFO     | all workflow threads have been joined
[2025-07-26 06:08:07] 2025-07-26 10:07:45,807 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-26 06:08:07] 2025-07-26 10:07:45,808 | INFO     | traces error code: 0
[2025-07-26 06:08:07] 2025-07-26 10:07:45,808 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-26 06:08:07] 2025-07-26 10:08:06,306 | INFO     | PID=2140182 has CPU usage=4.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-26 06:08:07] 2025-07-26 10:08:06,307 | INFO     | .. there are 41 such processes running
[2025-07-26 06:08:07] 2025-07-26 10:08:06,307 | INFO     | found 0 job(s) in 20 queues
[2025-07-26 06:08:07] 2025-07-26 10:08:06,307 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-26 06:08:07] 2025-07-26 10:08:06,307 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-26 06:08:07] 2025-07-26 10:08:06,307 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-26 06:08:07] 2025-07-26 10:08:06,307 | INFO     | [monitor] control thread has ended
[2025-07-26 06:08:07] 2025-07-26 10:08:06,810 [wrapper] ==== pilot stdout END ====
[2025-07-26 06:08:07] 2025-07-26 10:08:06,837 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-26 06:08:07] 2025-07-26 10:08:06,840 [wrapper] pilotpid: 2140182
[2025-07-26 06:08:07] 2025-07-26 10:08:06,842 [wrapper] Pilot exit status: 0
[2025-07-26 06:08:07] 2025-07-26 10:08:06,914 [wrapper] pandaids: 6741890671
[2025-07-26 06:08:07] 2025-07-26 10:08:07,092 [wrapper] cleanup supervisor_pilot 3435779 2140183
[2025-07-26 06:08:07] 2025-07-26 10:08:07,097 [wrapper] Test setup, not cleaning
[2025-07-26 06:08:07] 2025-07-26 10:08:07,103 [wrapper] apfmon messages muted
[2025-07-26 06:08:07] 2025-07-26 10:08:07,112 [wrapper] ==== wrapper stdout END ====
[2025-07-26 06:08:07] 2025-07-26 10:08:07,120 [wrapper] ==== wrapper stderr END ====
[2025-07-26 06:08:07]  *** Error codes and diagnostics ***
[2025-07-26 06:08:07]     "exeErrorCode": 0,
[2025-07-26 06:08:07]     "exeErrorDiag": "",
[2025-07-26 06:08:07]     "pilotErrorCode": 0,
[2025-07-26 06:08:07]     "pilotErrorDiag": "",
[2025-07-26 06:08:07]  *** Listing of results directory ***
[2025-07-26 06:08:07] total 602524
[2025-07-26 06:08:07] -rw-r--r--. 1 boincer umatlas    530466 Jul 23 04:54 pilot3.tar.gz
[2025-07-26 06:08:07] -rw-r--r--. 1 boincer umatlas      5112 Jul 23 05:04 queuedata.json
[2025-07-26 06:08:07] -rwx------. 1 boincer umatlas     36292 Jul 23 05:04 runpilot2-wrapper.sh
[2025-07-26 06:08:07] -rw-r--r--. 1 boincer umatlas       100 Jul 26 00:34 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-26 06:08:07] -rwxr-xr-x. 1 boincer umatlas      7986 Jul 26 00:34 run_atlas
[2025-07-26 06:08:07] -rw-r--r--. 1 boincer umatlas       105 Jul 26 00:34 job.xml
[2025-07-26 06:08:07] -rw-r--r--. 2 boincer umatlas 328187023 Jul 26 00:34 EVNT.45697470._000215.pool.root.1
[2025-07-26 06:08:07] -rw-r--r--. 2 boincer umatlas     15095 Jul 26 00:34 start_atlas.sh
[2025-07-26 06:08:07] drwxrwx--x. 2 boincer umatlas      4096 Jul 26 00:34 shared
[2025-07-26 06:08:07] -rw-r--r--. 2 boincer umatlas    542905 Jul 26 00:34 input.tar.gz
[2025-07-26 06:08:07] -rw-r--r--. 1 boincer umatlas         0 Jul 26 00:34 boinc_lockfile
[2025-07-26 06:08:07] -rw-r--r--. 1 boincer umatlas      2612 Jul 26 00:34 pandaJob.out
[2025-07-26 06:08:07] -rw-------. 1 boincer umatlas    980001 Jul 26 00:35 agis_schedconf.cvmfs.json
[2025-07-26 06:08:07] drwx------. 4 boincer umatlas      4096 Jul 26 00:35 pilot3
[2025-07-26 06:08:07] -rw-r--r--. 1 boincer umatlas      6935 Jul 26 06:01 init_data.xml
[2025-07-26 06:08:07] -rw-------. 1 boincer umatlas 281048597 Jul 26 06:06 HITS.45697472._004786.pool.root.1
[2025-07-26 06:08:07] -rw-r--r--. 1 boincer umatlas       531 Jul 26 06:06 boinc_task_state.xml
[2025-07-26 06:08:07] -rw-------. 1 boincer umatlas      1044 Jul 26 06:07 memory_monitor_summary.json
[2025-07-26 06:08:07] -rw-------. 1 boincer umatlas   1593052 Jul 26 06:07 agis_ddmendpoints.agis.ALL.json
[2025-07-26 06:08:07] -rw-------. 1 boincer umatlas    429441 Jul 26 06:07 log.45697472._004786.job.log.tgz.1
[2025-07-26 06:08:07] -rw-------. 1 boincer umatlas        95 Jul 26 06:07 pilot_heartbeat.json
[2025-07-26 06:08:07] -rw-------. 1 boincer umatlas      7781 Jul 26 06:07 heartbeat.json
[2025-07-26 06:08:07] -rw-r--r--. 1 boincer umatlas      8192 Jul 26 06:08 boinc_mmap_file
[2025-07-26 06:08:07] -rw-r--r--. 1 boincer umatlas        28 Jul 26 06:08 wrapper_checkpoint.txt
[2025-07-26 06:08:07] -rw-------. 1 boincer umatlas       823 Jul 26 06:08 pilotlog.txt
[2025-07-26 06:08:07] -rw-------. 1 boincer umatlas   1506223 Jul 26 06:08 log.45697472._004786.job.log.1
[2025-07-26 06:08:07] -rw-------. 1 boincer umatlas       357 Jul 26 06:08 output.list
[2025-07-26 06:08:07] -rw-r--r--. 1 boincer umatlas       620 Jul 26 06:08 runtime_log
[2025-07-26 06:08:07] -rw-------. 1 boincer umatlas   1955840 Jul 26 06:08 result.tar.gz
[2025-07-26 06:08:07] -rw-r--r--. 1 boincer umatlas      8656 Jul 26 06:08 runtime_log.err
[2025-07-26 06:08:07] -rw-------. 1 boincer umatlas       660 Jul 26 06:08 b6CMDmPaky7n9Rq4apOajLDm4fhM0noT9bVof3QYDm80vKDmyVgTmm.diag
[2025-07-26 06:08:07] -rw-r--r--. 1 boincer umatlas     21459 Jul 26 06:08 stderr.txt
[2025-07-26 06:08:07] HITS file was successfully produced:
[2025-07-26 06:08:07] -rw-------. 1 boincer umatlas 281048597 Jul 26 06:06 shared/HITS.pool.root.1
[2025-07-26 06:08:07]  *** Contents of shared directory: ***
[2025-07-26 06:08:07] total 597428
[2025-07-26 06:08:07] -rw-r--r--. 2 boincer umatlas 328187023 Jul 26 00:34 ATLAS.root_0
[2025-07-26 06:08:07] -rw-r--r--. 2 boincer umatlas     15095 Jul 26 00:34 start_atlas.sh
[2025-07-26 06:08:07] -rw-r--r--. 2 boincer umatlas    542905 Jul 26 00:34 input.tar.gz
[2025-07-26 06:08:07] -rw-------. 1 boincer umatlas 281048597 Jul 26 06:06 HITS.pool.root.1
[2025-07-26 06:08:07] -rw-------. 1 boincer umatlas   1955840 Jul 26 06:08 result.tar.gz
06:08:08 (2135728): run_atlas exited; CPU time 54141.813069
06:08:08 (2135728): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN