Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
00:21:44 (1729): wrapper (7.7.26015): starting
00:21:44 (1729): wrapper: running run_atlas (--nthreads 12)
[2025-07-26 00:21:44] Arguments: --nthreads 12
[2025-07-26 00:21:44] Threads: 12
[2025-07-26 00:21:44] Checking for CVMFS
[2025-07-26 00:21:44] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-26 00:21:44] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-26 00:21:44] Running cvmfs_config stat atlas.cern.ch
[2025-07-26 00:21:44] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-26 00:21:44] 2.11.2.0 3087 110030 99748 148764 0 56 18098120 20275201 1 130560 0 38141195 99.973 9056280 10314 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-07-26 00:21:44] CVMFS is ok
[2025-07-26 00:21:44] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-26 00:21:44] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-26 00:21:44] Further information can be found at the LHC@home message board.
[2025-07-26 00:21:44] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-26 00:21:44] Checking for apptainer binary...
[2025-07-26 00:21:44] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-26 00:21:44] Running /usr/bin/apptainer --version
[2025-07-26 00:21:44] apptainer version 1.3.2-1.el7
[2025-07-26 00:21:44] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-26 00:21:46] c-115-42.aglt2.org
[2025-07-26 00:21:46] apptainer works
[2025-07-26 00:21:46] Set ATHENA_PROC_NUMBER=12
[2025-07-26 00:21:46] Set ATHENA_CORE_NUMBER=12
[2025-07-26 00:21:46] Starting ATLAS job with PandaID=6745060897
[2025-07-26 00:21:46] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-26 01:36:50]  *** The last 200 lines of the pilot log: ***
[2025-07-26 01:36:50]  is_tar=False
[2025-07-26 01:36:50]  lfn=log.45743349._026079.job.log.tgz.1
[2025-07-26 01:36:50]  mtime=0
[2025-07-26 01:36:50]  protocol_id=None
[2025-07-26 01:36:50]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-07-26 01:36:50]  replicas=None
[2025-07-26 01:36:50]  scope=mc23_13p6TeV
[2025-07-26 01:36:50]  status=None
[2025-07-26 01:36:50]  status_code=0
[2025-07-26 01:36:50]  storage_token=
[2025-07-26 01:36:50]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6745060897/log.45743349._026079.job.log.tgz.1
[2025-07-26 01:36:50]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/53/2e/log.45743349._026079.job.log.tgz.1
[2025-07-26 01:36:50]  workdir=None
[2025-07-26 01:36:50] ]
[2025-07-26 01:36:50] 2025-07-26 05:36:12,108 | INFO     | transferring file log.45743349._026079.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6745060897/log.45743349._026079.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-07-26 01:36:50] 2025-07-26 05:36:12,108 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6745060897/log.45743349._026079.job.log.tgz.1 /tmp/boinchome/slots/0/log.45743349._026079.job
[2025-07-26 01:36:50] 2025-07-26 05:36:12,131 | INFO     | adding to output.list: log.45743349._026079.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/53/2e/log.45743349._026079.job.log.tg
[2025-07-26 01:36:50] 2025-07-26 05:36:12,132 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-26 01:36:50] 2025-07-26 05:36:12,132 | INFO     | summary of transferred files:
[2025-07-26 01:36:50] 2025-07-26 05:36:12,132 | INFO     |  -- lfn=log.45743349._026079.job.log.tgz.1, status_code=0, status=transferred
[2025-07-26 01:36:50] 2025-07-26 05:36:12,133 | INFO     | stage-out finished correctly
[2025-07-26 01:36:50] 2025-07-26 05:36:12,233 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-26 01:36:50] 2025-07-26 05:36:13,088 | INFO     | job 6745060897 has state=finished
[2025-07-26 01:36:50] 2025-07-26 05:36:13,088 | INFO     | preparing for final server update for job 6745060897 in state='finished'
[2025-07-26 01:36:50] 2025-07-26 05:36:13,146 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2025-07-26 01:36:50] 2025-07-26 05:36:13,146 | INFO     | this job has now completed (state=finished)
[2025-07-26 01:36:50] 2025-07-26 05:36:13,146 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-26 01:36:50] 2025-07-26 05:36:13,146 | INFO     | log transfer has been attempted: DONE
[2025-07-26 01:36:50] 2025-07-26 05:36:13,146 | INFO     | job 6745060897 has finished - writing final server update
[2025-07-26 01:36:50] 2025-07-26 05:36:13,147 | INFO     | total number of processed events: 400 (read)
[2025-07-26 01:36:50] 2025-07-26 05:36:13,147 | INFO     | executing command: lscpu
[2025-07-26 01:36:50] 2025-07-26 05:36:13,174 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-26 01:36:50] 2025-07-26 05:36:13,671 | INFO     | PID=5444 has CPU usage=6.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-07-26 01:36:50] 2025-07-26 05:36:14,019 | INFO     | monitor loop #334: job 0:6745060897 is in state 'finished'
[2025-07-26 01:36:50] 2025-07-26 05:36:14,028 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-26 01:36:50] 2025-07-26 05:36:16,531 | INFO     | monitor loop #335: job 0:6745060897 is in state 'finished'
[2025-07-26 01:36:50] 2025-07-26 05:36:16,531 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-26 01:36:50] 2025-07-26 05:36:17,951 | INFO     | CPU arch script returned: x86-64-v2
[2025-07-26 01:36:50] 2025-07-26 05:36:17,954 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1806.6666666666667
[2025-07-26 01:36:50] 2025-07-26 05:36:17,956 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6745060897/memory_monitor_summary.json (trf name=prmon)
[2025-07-26 01:36:50] 2025-07-26 05:36:17,957 | INFO     | extracted standard info from prmon json
[2025-07-26 01:36:50] 2025-07-26 05:36:17,957 | INFO     | extracted standard memory fields from prmon json
[2025-07-26 01:36:50] 2025-07-26 05:36:17,958 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-26 01:36:50] 2025-07-26 05:36:17,958 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-26 01:36:50] 2025-07-26 05:36:17,958 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-26 01:36:50] 2025-07-26 05:36:17,960 | INFO     | fitting pss+swap vs Time
[2025-07-26 01:36:50] 2025-07-26 05:36:17,960 | INFO     | sum of square deviations: 89127252.5
[2025-07-26 01:36:50] 2025-07-26 05:36:17,960 | INFO     | sum of deviations: -6897243891.999999
[2025-07-26 01:36:50] 2025-07-26 05:36:17,961 | INFO     | mean x: 1753506036.5
[2025-07-26 01:36:50] 2025-07-26 05:36:17,961 | INFO     | mean y: 2902063.5454545454
[2025-07-26 01:36:50] 2025-07-26 05:36:17,961 | INFO     | -- intersect: 135700553013.06567
[2025-07-26 01:36:50] 2025-07-26 05:36:17,961 | INFO     | intersect: 135700553013.06567
[2025-07-26 01:36:50] 2025-07-26 05:36:17,961 | INFO     | chi2: 0.06455696481001442
[2025-07-26 01:36:50] 2025-07-26 05:36:17,961 | INFO     | -- intersect: 135700553013.06567
[2025-07-26 01:36:50] 2025-07-26 05:36:17,962 | INFO     | current memory leak: -77.39 B/s (using 66 data points, chi2=0.06)
[2025-07-26 01:36:50] 2025-07-26 05:36:17,962 | INFO     | could have reported an average CPU frequency of 2167 MHz (6 samples)
[2025-07-26 01:36:50] 2025-07-26 05:36:17,962 | INFO     | ..............................
[2025-07-26 01:36:50] 2025-07-26 05:36:17,962 | INFO     | . Timing measurements:
[2025-07-26 01:36:50] 2025-07-26 05:36:17,962 | INFO     | . get job = 0 s
[2025-07-26 01:36:50] 2025-07-26 05:36:17,962 | INFO     | . initial setup = 2 s
[2025-07-26 01:36:50] 2025-07-26 05:36:17,963 | INFO     | . payload setup = 9 s
[2025-07-26 01:36:50] 2025-07-26 05:36:17,963 | INFO     | . stage-in = 0 s
[2025-07-26 01:36:50] 2025-07-26 05:36:17,963 | INFO     | . payload execution = 4423 s
[2025-07-26 01:36:50] 2025-07-26 05:36:17,963 | INFO     | . stage-out = 0 s
[2025-07-26 01:36:50] 2025-07-26 05:36:17,963 | INFO     | . log creation = 0 s
[2025-07-26 01:36:50] 2025-07-26 05:36:17,963 | INFO     | ..............................
[2025-07-26 01:36:50] 2025-07-26 05:36:18,372 | INFO     | 
[2025-07-26 01:36:50] 2025-07-26 05:36:18,373 | INFO     | job summary report
[2025-07-26 01:36:50] 2025-07-26 05:36:18,373 | INFO     | --------------------------------------------------
[2025-07-26 01:36:50] 2025-07-26 05:36:18,373 | INFO     | PanDA job id: 6745060897
[2025-07-26 01:36:50] 2025-07-26 05:36:18,373 | INFO     | task id: 45743349
[2025-07-26 01:36:50] 2025-07-26 05:36:18,374 | INFO     | errors: (none)
[2025-07-26 01:36:50] 2025-07-26 05:36:18,374 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-26 01:36:50] 2025-07-26 05:36:18,374 | INFO     | pilot state: finished 
[2025-07-26 01:36:50] 2025-07-26 05:36:18,374 | INFO     | transexitcode: 0
[2025-07-26 01:36:50] 2025-07-26 05:36:18,374 | INFO     | exeerrorcode: 0
[2025-07-26 01:36:50] 2025-07-26 05:36:18,374 | INFO     | exeerrordiag: 
[2025-07-26 01:36:50] 2025-07-26 05:36:18,374 | INFO     | exitcode: 0
[2025-07-26 01:36:50] 2025-07-26 05:36:18,375 | INFO     | exitmsg: OK
[2025-07-26 01:36:50] 2025-07-26 05:36:18,375 | INFO     | cpuconsumptiontime: 47080 s
[2025-07-26 01:36:50] 2025-07-26 05:36:18,375 | INFO     | nevents: 400
[2025-07-26 01:36:50] 2025-07-26 05:36:18,375 | INFO     | neventsw: 0
[2025-07-26 01:36:50] 2025-07-26 05:36:18,375 | INFO     | pid: 12093
[2025-07-26 01:36:50] 2025-07-26 05:36:18,375 | INFO     | pgrp: 12093
[2025-07-26 01:36:50] 2025-07-26 05:36:18,375 | INFO     | corecount: 12
[2025-07-26 01:36:50] 2025-07-26 05:36:18,376 | INFO     | event service: False
[2025-07-26 01:36:50] 2025-07-26 05:36:18,376 | INFO     | sizes: {0: 2397248, 1: 2397503, 6: 2397765, 12: 2397793, 4436: 2423872, 4437: 2423871, 4438: 2433109, 4443: 2433247}
[2025-07-26 01:36:50] 2025-07-26 05:36:18,376 | INFO     | --------------------------------------------------
[2025-07-26 01:36:50] 2025-07-26 05:36:18,376 | INFO     | 
[2025-07-26 01:36:50] 2025-07-26 05:36:18,376 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-07-26 01:36:50] 2025-07-26 05:36:18,401 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-26 01:36:50] 2025-07-26 05:36:18,402 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-26 01:36:50] 2025-07-26 05:36:18,402 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-26 01:36:50] 2025-07-26 05:36:18,402 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-26 01:36:50] 2025-07-26 05:36:18,402 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-26 01:36:50] 2025-07-26 05:36:18,403 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-26 01:36:50] 2025-07-26 05:36:18,403 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-26 01:36:50] 2025-07-26 05:36:18,403 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-26 01:36:50] 2025-07-26 05:36:18,403 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-26 01:36:50] 2025-07-26 05:36:18,403 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-26 01:36:50] 2025-07-26 05:36:18,403 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-26 01:36:50] 2025-07-26 05:36:18,404 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-26 01:36:50] 2025-07-26 05:36:18,404 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-26 01:36:50] 2025-07-26 05:36:18,404 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-26 01:36:50] 2025-07-26 05:36:18,404 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-26 01:36:50] 2025-07-26 05:36:18,404 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-26 01:36:50] 2025-07-26 05:36:18,405 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-26 01:36:50] 2025-07-26 05:36:18,405 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-26 01:36:50] 2025-07-26 05:36:18,405 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-26 01:36:50] 2025-07-26 05:36:18,405 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-26 01:36:50] 2025-07-26 05:36:18,405 | INFO     | job 6745060897 has completed (purged errors)
[2025-07-26 01:36:50] 2025-07-26 05:36:18,405 | INFO     | overall cleanup function is called
[2025-07-26 01:36:50] 2025-07-26 05:36:19,409 | INFO     | --- collectZombieJob: --- 10, [12093]
[2025-07-26 01:36:50] 2025-07-26 05:36:19,409 | INFO     | zombie collector waiting for pid 12093
[2025-07-26 01:36:50] 2025-07-26 05:36:19,409 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-26 01:36:50] 2025-07-26 05:36:19,409 | INFO     | collected zombie processes
[2025-07-26 01:36:50] 2025-07-26 05:36:19,409 | INFO     | will attempt to kill all subprocesses of pid=12093
[2025-07-26 01:36:50] 2025-07-26 05:36:19,498 | INFO     | process IDs to be killed: [12093] (in reverse order)
[2025-07-26 01:36:50] 2025-07-26 05:36:19,553 | WARNING  | found no corresponding commands to process id(s)
[2025-07-26 01:36:50] 2025-07-26 05:36:19,553 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-26 01:36:50] 2025-07-26 05:36:19,557 | INFO     | did not find any defunct processes belonging to 12093
[2025-07-26 01:36:50] 2025-07-26 05:36:19,560 | INFO     | did not find any defunct processes belonging to 12093
[2025-07-26 01:36:50] 2025-07-26 05:36:19,561 | INFO     | ready for new job
[2025-07-26 01:36:50] 2025-07-26 05:36:19,561 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-26 01:36:50] 2025-07-26 05:36:19,562 | INFO     | ***************************************
[2025-07-26 01:36:50] 2025-07-26 05:36:19,562 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-26 01:36:50] 2025-07-26 05:36:19,562 | INFO     | ***************************************
[2025-07-26 01:36:50] 2025-07-26 05:36:19,563 | INFO     | 
[2025-07-26 01:36:50] 2025-07-26 05:36:19,563 | INFO     | architecture information:
[2025-07-26 01:36:50] 2025-07-26 05:36:19,564 | INFO     | executing command: cat /etc/os-release
[2025-07-26 01:36:50] 2025-07-26 05:36:19,582 | INFO     | cat /etc/os-release:
[2025-07-26 01:36:50] NAME="CentOS Linux"
[2025-07-26 01:36:50] VERSION="7 (Core)"
[2025-07-26 01:36:50] ID="centos"
[2025-07-26 01:36:50] ID_LIKE="rhel fedora"
[2025-07-26 01:36:50] VERSION_ID="7"
[2025-07-26 01:36:50] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-26 01:36:50] ANSI_COLOR="0;31"
[2025-07-26 01:36:50] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-26 01:36:50] HOME_URL="https://www.centos.org/"
[2025-07-26 01:36:50] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-26 01:36:50] 
[2025-07-26 01:36:50] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-26 01:36:50] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-26 01:36:50] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-26 01:36:50] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-26 01:36:50] 
[2025-07-26 01:36:50] 2025-07-26 05:36:19,582 | INFO     | ***************************************
[2025-07-26 01:36:50] 2025-07-26 05:36:20,085 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-07-26 01:36:50] 2025-07-26 05:36:20,103 | INFO     | sufficient remaining disk space (18568183808 B)
[2025-07-26 01:36:50] 2025-07-26 05:36:20,104 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-26 01:36:50] 2025-07-26 05:36:20,104 | INFO     | current server update state: UPDATING_FINAL
[2025-07-26 01:36:50] 2025-07-26 05:36:20,104 | INFO     | update_server=False
[2025-07-26 01:36:50] 2025-07-26 05:36:20,104 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-26 01:36:50] 2025-07-26 05:36:20,104 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-26 01:36:50] 2025-07-26 05:36:20,104 | INFO     | aborting loop
[2025-07-26 01:36:50] 2025-07-26 05:36:20,139 | INFO     | all data control threads have been joined
[2025-07-26 01:36:50] 2025-07-26 05:36:20,222 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-26 01:36:50] 2025-07-26 05:36:20,340 | INFO     | all payload control threads have been joined
[2025-07-26 01:36:50] 2025-07-26 05:36:21,044 | INFO     | all job control threads have been joined
[2025-07-26 01:36:50] 2025-07-26 05:36:21,105 | INFO     | [job] retrieve thread has finished
[2025-07-26 01:36:50] 2025-07-26 05:36:21,110 | INFO     | [job] job monitor thread has finished
[2025-07-26 01:36:50] 2025-07-26 05:36:21,144 | INFO     | [data] control thread has finished
[2025-07-26 01:36:50] 2025-07-26 05:36:21,192 | INFO     | [payload] execute_payloads thread has finished
[2025-07-26 01:36:50] 2025-07-26 05:36:21,346 | INFO     | [payload] control thread has finished
[2025-07-26 01:36:50] 2025-07-26 05:36:21,390 | INFO     | [payload] validate_pre thread has finished
[2025-07-26 01:36:50] 2025-07-26 05:36:21,408 | INFO     | [job] create_data_payload thread has finished
[2025-07-26 01:36:50] 2025-07-26 05:36:21,485 | INFO     | [data] copytool_in thread has finished
[2025-07-26 01:36:50] 2025-07-26 05:36:21,902 | INFO     | [payload] validate_post thread has finished
[2025-07-26 01:36:50] 2025-07-26 05:36:22,049 | INFO     | [job] control thread has finished
[2025-07-26 01:36:50] 2025-07-26 05:36:22,227 | INFO     | [data] copytool_out thread has finished
[2025-07-26 01:36:50] 2025-07-26 05:36:22,410 | INFO     | [payload] failed_post thread has finished
[2025-07-26 01:36:50] 2025-07-26 05:36:22,413 | INFO     | [job] validate thread has finished
[2025-07-26 01:36:50] 2025-07-26 05:36:22,814 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-26 01:36:50] 2025-07-26 05:36:23,049 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-26 01:36:50] 2025-07-26 05:36:24,054 | INFO     | [job] queue monitor thread has finished
[2025-07-26 01:36:50] 2025-07-26 05:36:26,820 | INFO     | [data] queue_monitor thread has finished
[2025-07-26 01:36:50] 2025-07-26 05:36:30,818 | INFO     | job.realtimelogging is not enabled
[2025-07-26 01:36:50] 2025-07-26 05:36:31,819 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-26 01:36:50] 2025-07-26 05:36:32,703 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140421022549824)>', '<ExcThread(monitor, started 140420549940992)>']
[2025-07-26 01:36:50] 2025-07-26 05:36:37,713 | INFO     | all workflow threads have been joined
[2025-07-26 01:36:50] 2025-07-26 05:36:37,713 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-26 01:36:50] 2025-07-26 05:36:37,721 | INFO     | traces error code: 0
[2025-07-26 01:36:50] 2025-07-26 05:36:37,721 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-26 01:36:50] 2025-07-26 05:36:49,876 | INFO     | PID=5444 has CPU usage=1.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-07-26 01:36:50] 2025-07-26 05:36:49,877 | INFO     | found 0 job(s) in 20 queues
[2025-07-26 01:36:50] 2025-07-26 05:36:49,877 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-26 01:36:50] 2025-07-26 05:36:49,877 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-26 01:36:50] 2025-07-26 05:36:49,877 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-26 01:36:50] 2025-07-26 05:36:49,877 | INFO     | [monitor] control thread has ended
[2025-07-26 01:36:50] 2025-07-26 05:36:49,973 [wrapper] ==== pilot stdout END ====
[2025-07-26 01:36:50] 2025-07-26 05:36:49,977 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-26 01:36:50] 2025-07-26 05:36:49,980 [wrapper] pilotpid: 5444
[2025-07-26 01:36:50] 2025-07-26 05:36:49,983 [wrapper] Pilot exit status: 0
[2025-07-26 01:36:50] 2025-07-26 05:36:49,998 [wrapper] pandaids: 6745060897
[2025-07-26 01:36:50] 2025-07-26 05:36:50,041 [wrapper] cleanup supervisor_pilot 10099 5445
[2025-07-26 01:36:50] 2025-07-26 05:36:50,045 [wrapper] Test setup, not cleaning
[2025-07-26 01:36:50] 2025-07-26 05:36:50,049 [wrapper] apfmon messages muted
[2025-07-26 01:36:50] 2025-07-26 05:36:50,053 [wrapper] ==== wrapper stdout END ====
[2025-07-26 01:36:50] 2025-07-26 05:36:50,057 [wrapper] ==== wrapper stderr END ====
[2025-07-26 01:36:50]  *** Error codes and diagnostics ***
[2025-07-26 01:36:50]     "exeErrorCode": 0,
[2025-07-26 01:36:50]     "exeErrorDiag": "",
[2025-07-26 01:36:50]     "pilotErrorCode": 0,
[2025-07-26 01:36:50]     "pilotErrorDiag": "",
[2025-07-26 01:36:50]  *** Listing of results directory ***
[2025-07-26 01:36:50] total 436460
[2025-07-26 01:36:50] -rw-r--r-- 1 boincer umatlas    530466 Jul 25 15:17 pilot3.tar.gz
[2025-07-26 01:36:50] -rwx------ 1 boincer umatlas     36292 Jul 25 15:34 runpilot2-wrapper.sh
[2025-07-26 01:36:50] -rw-r--r-- 1 boincer umatlas      5112 Jul 25 15:34 queuedata.json
[2025-07-26 01:36:50] -rw-r--r-- 1 boincer umatlas       100 Jul 26 00:21 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-26 01:36:50] -rwxr-xr-x 1 boincer umatlas      7986 Jul 26 00:21 run_atlas
[2025-07-26 01:36:50] -rw-r--r-- 1 boincer umatlas       105 Jul 26 00:21 job.xml
[2025-07-26 01:36:50] -rw-r--r-- 2 boincer umatlas 233502663 Jul 26 00:21 EVNT.45743347._001458.pool.root.1
[2025-07-26 01:36:50] -rw-r--r-- 2 boincer umatlas     15095 Jul 26 00:21 start_atlas.sh
[2025-07-26 01:36:50] drwxrwx--x 2 boincer umatlas      4096 Jul 26 00:21 shared
[2025-07-26 01:36:50] -rw-r--r-- 2 boincer umatlas    542889 Jul 26 00:21 input.tar.gz
[2025-07-26 01:36:50] -rw-r--r-- 1 boincer umatlas         0 Jul 26 00:21 boinc_lockfile
[2025-07-26 01:36:50] -rw-r--r-- 1 boincer umatlas      2563 Jul 26 00:21 pandaJob.out
[2025-07-26 01:36:50] -rw------- 1 boincer umatlas    980001 Jul 26 00:21 agis_schedconf.cvmfs.json
[2025-07-26 01:36:50] -rw------- 1 boincer umatlas   1593052 Jul 26 00:21 agis_ddmendpoints.agis.ALL.json
[2025-07-26 01:36:50] drwx------ 4 boincer umatlas      4096 Jul 26 00:21 pilot3
[2025-07-26 01:36:50] -rw-r--r-- 1 boincer umatlas      5869 Jul 26 01:30 init_data.xml
[2025-07-26 01:36:50] -rw------- 1 boincer umatlas 207995509 Jul 26 01:35 HITS.45743349._026079.pool.root.1
[2025-07-26 01:36:50] -rw------- 1 boincer umatlas        95 Jul 26 01:35 pilot_heartbeat.json
[2025-07-26 01:36:50] -rw-r--r-- 1 boincer umatlas       529 Jul 26 01:35 boinc_task_state.xml
[2025-07-26 01:36:50] -rw------- 1 boincer umatlas      1048 Jul 26 01:36 memory_monitor_summary.json
[2025-07-26 01:36:50] -rw------- 1 boincer umatlas    354300 Jul 26 01:36 log.45743349._026079.job.log.tgz.1
[2025-07-26 01:36:50] -rw------- 1 boincer umatlas      7855 Jul 26 01:36 heartbeat.json
[2025-07-26 01:36:50] -rw-r--r-- 1 boincer umatlas      8192 Jul 26 01:36 boinc_mmap_file
[2025-07-26 01:36:50] -rw-r--r-- 1 boincer umatlas        27 Jul 26 01:36 wrapper_checkpoint.txt
[2025-07-26 01:36:50] -rw------- 1 boincer umatlas       744 Jul 26 01:36 pilotlog.txt
[2025-07-26 01:36:50] -rw------- 1 boincer umatlas    429777 Jul 26 01:36 log.45743349._026079.job.log.1
[2025-07-26 01:36:50] -rw------- 1 boincer umatlas       357 Jul 26 01:36 output.list
[2025-07-26 01:36:50] -rw-r--r-- 1 boincer umatlas       620 Jul 26 01:36 runtime_log
[2025-07-26 01:36:50] -rw------- 1 boincer umatlas    798720 Jul 26 01:36 result.tar.gz
[2025-07-26 01:36:50] -rw-r--r-- 1 boincer umatlas      8662 Jul 26 01:36 runtime_log.err
[2025-07-26 01:36:50] -rw------- 1 boincer umatlas       659 Jul 26 01:36 DteKDm4Mdz7n9Rq4apOajLDm4fhM0noT9bVof3QYDmXVzKDmrFXqOn.diag
[2025-07-26 01:36:50] -rw-r--r-- 1 boincer umatlas     21661 Jul 26 01:36 stderr.txt
[2025-07-26 01:36:50] HITS file was successfully produced:
[2025-07-26 01:36:50] -rw------- 1 boincer umatlas 207995509 Jul 26 01:35 shared/HITS.pool.root.1
[2025-07-26 01:36:50]  *** Contents of shared directory: ***
[2025-07-26 01:36:50] total 432488
[2025-07-26 01:36:50] -rw-r--r-- 2 boincer umatlas 233502663 Jul 26 00:21 ATLAS.root_0
[2025-07-26 01:36:50] -rw-r--r-- 2 boincer umatlas     15095 Jul 26 00:21 start_atlas.sh
[2025-07-26 01:36:50] -rw-r--r-- 2 boincer umatlas    542889 Jul 26 00:21 input.tar.gz
[2025-07-26 01:36:50] -rw------- 1 boincer umatlas 207995509 Jul 26 01:35 HITS.pool.root.1
[2025-07-26 01:36:50] -rw------- 1 boincer umatlas    798720 Jul 26 01:36 result.tar.gz
01:36:51 (1729): run_atlas exited; CPU time 47069.960788
01:36:51 (1729): called boinc_finish(0)

</stderr_txt>
]]>

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