Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
23:47:12 (547351): wrapper (7.7.26015): starting
23:47:12 (547351): wrapper: running run_atlas (--nthreads 10)
[2025-07-25 23:47:12] Arguments: --nthreads 10
[2025-07-25 23:47:12] Threads: 10
[2025-07-25 23:47:12] Checking for CVMFS
[2025-07-25 23:47:12] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-25 23:47:13] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-25 23:47:13] Running cvmfs_config stat atlas.cern.ch
[2025-07-25 23:47:13] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-25 23:47:13] 2.12.6.0 705810 16421 277388 148763 3 273 31065814 32935937 13943 16776704 1 56442988 99.580 65605277 27245 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-07-25 23:47:13] CVMFS is ok
[2025-07-25 23:47:13] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-25 23:47:13] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-25 23:47:13] Further information can be found at the LHC@home message board.
[2025-07-25 23:47:13] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-25 23:47:13] Checking for apptainer binary...
[2025-07-25 23:47:13] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-25 23:47:13] Running /usr/bin/apptainer --version
[2025-07-25 23:47:13] apptainer version 1.4.1-1.el9
[2025-07-25 23:47:13] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-25 23:47:13] c-8-16.aglt2.org
[2025-07-25 23:47:13] apptainer works
[2025-07-25 23:47:13] Set ATHENA_PROC_NUMBER=10
[2025-07-25 23:47:13] Set ATHENA_CORE_NUMBER=10
[2025-07-25 23:47:13] Starting ATLAS job with PandaID=6745059003
[2025-07-25 23:47:13] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-26 02:20:58]  *** The last 200 lines of the pilot log: ***
[2025-07-26 02:20:58] 2025-07-26 06:20:21,550 | INFO     | executing command: lscpu
[2025-07-26 02:20:58] 2025-07-26 06:20:21,603 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-26 02:20:58] 2025-07-26 06:20:23,820 | INFO     | monitor loop #619: job 0:6745059003 is in state 'finished'
[2025-07-26 02:20:58] 2025-07-26 06:20:23,820 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-26 02:20:58] 2025-07-26 06:20:25,714 | INFO     | CPU arch script returned: x86-64-v3
[2025-07-26 02:20:58] 2025-07-26 06:20:25,721 | INFO     | found 20 cores (10 cores per socket, 2 sockets) HT, CPU MHz: 2660.068624999999
[2025-07-26 02:20:58] 2025-07-26 06:20:25,728 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6745059003/memory_monitor_summary.json (trf name=prmon)
[2025-07-26 02:20:58] 2025-07-26 06:20:25,729 | INFO     | extracted standard info from prmon json
[2025-07-26 02:20:58] 2025-07-26 06:20:25,729 | INFO     | extracted standard memory fields from prmon json
[2025-07-26 02:20:58] 2025-07-26 06:20:25,729 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-26 02:20:58] 2025-07-26 06:20:25,730 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-26 02:20:58] 2025-07-26 06:20:25,730 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-26 02:20:58] 2025-07-26 06:20:25,733 | INFO     | fitting pss+swap vs Time
[2025-07-26 02:20:58] 2025-07-26 06:20:25,734 | INFO     | sum of square deviations: 1046440175.9733328
[2025-07-26 02:20:58] 2025-07-26 06:20:25,735 | INFO     | sum of deviations: -9528632771.42667
[2025-07-26 02:20:58] 2025-07-26 06:20:25,735 | INFO     | mean x: 1753506216.6533334
[2025-07-26 02:20:58] 2025-07-26 06:20:25,735 | INFO     | mean y: 2297206.453333333
[2025-07-26 02:20:58] 2025-07-26 06:20:25,735 | INFO     | -- intersect: 15969303428.63143
[2025-07-26 02:20:58] 2025-07-26 06:20:25,735 | INFO     | intersect: 15969303428.63143
[2025-07-26 02:20:58] 2025-07-26 06:20:25,736 | INFO     | chi2: 1.8397284771386875
[2025-07-26 02:20:58] 2025-07-26 06:20:25,736 | INFO     | sum of square deviations: 945245293.351726
[2025-07-26 02:20:58] 2025-07-26 06:20:25,737 | INFO     | sum of deviations: -8163456730.806897
[2025-07-26 02:20:58] 2025-07-26 06:20:25,737 | INFO     | mean x: 1753506064.1586206
[2025-07-26 02:20:58] 2025-07-26 06:20:25,737 | INFO     | mean y: 2299227.165517241
[2025-07-26 02:20:58] 2025-07-26 06:20:25,737 | INFO     | -- intersect: 15146168212.969511
[2025-07-26 02:20:58] 2025-07-26 06:20:25,737 | INFO     | intersect: 15146168212.969511
[2025-07-26 02:20:58] 2025-07-26 06:20:25,738 | INFO     | chi2: 1.8374120289160938
[2025-07-26 02:20:58] 2025-07-26 06:20:25,738 | INFO     | current chi2=1.8374120289160938 (change=0.1259125056430307 %)
[2025-07-26 02:20:58] 2025-07-26 06:20:25,738 | INFO     | right removable region: 144
[2025-07-26 02:20:58] 2025-07-26 06:20:25,738 | INFO     | sum of square deviations: 945231263.351726
[2025-07-26 02:20:58] 2025-07-26 06:20:25,739 | INFO     | sum of deviations: -31333960947.137928
[2025-07-26 02:20:58] 2025-07-26 06:20:25,739 | INFO     | mean x: 1753506369.1586206
[2025-07-26 02:20:58] 2025-07-26 06:20:25,739 | INFO     | mean y: 2329659.3103448274
[2025-07-26 02:20:58] 2025-07-26 06:20:25,740 | INFO     | -- intersect: 58130220919.42914
[2025-07-26 02:20:58] 2025-07-26 06:20:25,740 | INFO     | intersect: 58130220919.42914
[2025-07-26 02:20:58] 2025-07-26 06:20:25,740 | INFO     | chi2: 0.33734001881217435
[2025-07-26 02:20:58] 2025-07-26 06:20:25,740 | INFO     | current chi2=0.33734001881217435 (change=81.66359748168729 %)
[2025-07-26 02:20:58] 2025-07-26 06:20:25,740 | INFO     | sum of square deviations: 850766663.2214278
[2025-07-26 02:20:58] 2025-07-26 06:20:25,741 | INFO     | sum of deviations: -28634979364.271408
[2025-07-26 02:20:58] 2025-07-26 06:20:25,741 | INFO     | mean x: 1753506521.6642857
[2025-07-26 02:20:58] 2025-07-26 06:20:25,741 | INFO     | mean y: 2325183.185714286
[2025-07-26 02:20:58] 2025-07-26 06:20:25,741 | INFO     | -- intersect: 59021590081.09068
[2025-07-26 02:20:58] 2025-07-26 06:20:25,741 | INFO     | intersect: 59021590081.09068
[2025-07-26 02:20:58] 2025-07-26 06:20:25,742 | INFO     | chi2: 0.30657684500118954
[2025-07-26 02:20:58] 2025-07-26 06:20:25,742 | INFO     | current chi2=0.30657684500118954 (change=9.119337195541352 %)
[2025-07-26 02:20:58] 2025-07-26 06:20:25,742 | INFO     | left removable region: 20
[2025-07-26 02:20:58] 2025-07-26 06:20:25,742 | INFO     | sum of square deviations: 591144312.0887076
[2025-07-26 02:20:58] 2025-07-26 06:20:25,743 | INFO     | sum of deviations: -13450664722.20968
[2025-07-26 02:20:58] 2025-07-26 06:20:25,743 | INFO     | mean x: 1753506643.653226
[2025-07-26 02:20:58] 2025-07-26 06:20:25,743 | INFO     | mean y: 2302853.2741935486
[2025-07-26 02:20:58] 2025-07-26 06:20:25,743 | INFO     | -- intersect: 39900902010.238495
[2025-07-26 02:20:58] 2025-07-26 06:20:25,743 | INFO     | intersect: 39900902010.238495
[2025-07-26 02:20:58] 2025-07-26 06:20:25,744 | INFO     | chi2: 0.22202492751725156
[2025-07-26 02:20:58] 2025-07-26 06:20:25,744 | INFO     | -- intersect: 39900902010.238495
[2025-07-26 02:20:58] 2025-07-26 06:20:25,744 | INFO     | current memory leak: -22.75 B/s (using 124 data points, chi2=0.22)
[2025-07-26 02:20:58] 2025-07-26 06:20:25,744 | INFO     | could have reported an average CPU frequency of 2642 MHz (9 samples)
[2025-07-26 02:20:58] 2025-07-26 06:20:25,745 | INFO     | ..............................
[2025-07-26 02:20:58] 2025-07-26 06:20:25,745 | INFO     | . Timing measurements:
[2025-07-26 02:20:58] 2025-07-26 06:20:25,745 | INFO     | . get job = 0 s
[2025-07-26 02:20:58] 2025-07-26 06:20:25,745 | INFO     | . initial setup = 3 s
[2025-07-26 02:20:58] 2025-07-26 06:20:25,745 | INFO     | . payload setup = 7 s
[2025-07-26 02:20:58] 2025-07-26 06:20:25,745 | INFO     | . stage-in = 0 s
[2025-07-26 02:20:58] 2025-07-26 06:20:25,745 | INFO     | . payload execution = 9146 s
[2025-07-26 02:20:58] 2025-07-26 06:20:25,746 | INFO     | . stage-out = 1 s
[2025-07-26 02:20:58] 2025-07-26 06:20:25,746 | INFO     | . log creation = 0 s
[2025-07-26 02:20:58] 2025-07-26 06:20:25,746 | INFO     | ..............................
[2025-07-26 02:20:58] 2025-07-26 06:20:26,040 | INFO     | 
[2025-07-26 02:20:58] 2025-07-26 06:20:26,040 | INFO     | job summary report
[2025-07-26 02:20:58] 2025-07-26 06:20:26,040 | INFO     | --------------------------------------------------
[2025-07-26 02:20:58] 2025-07-26 06:20:26,040 | INFO     | PanDA job id: 6745059003
[2025-07-26 02:20:58] 2025-07-26 06:20:26,040 | INFO     | task id: 45743349
[2025-07-26 02:20:58] 2025-07-26 06:20:26,040 | INFO     | errors: (none)
[2025-07-26 02:20:58] 2025-07-26 06:20:26,040 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-26 02:20:58] 2025-07-26 06:20:26,041 | INFO     | pilot state: finished 
[2025-07-26 02:20:58] 2025-07-26 06:20:26,041 | INFO     | transexitcode: 0
[2025-07-26 02:20:58] 2025-07-26 06:20:26,041 | INFO     | exeerrorcode: 0
[2025-07-26 02:20:58] 2025-07-26 06:20:26,041 | INFO     | exeerrordiag: 
[2025-07-26 02:20:58] 2025-07-26 06:20:26,041 | INFO     | exitcode: 0
[2025-07-26 02:20:58] 2025-07-26 06:20:26,041 | INFO     | exitmsg: OK
[2025-07-26 02:20:58] 2025-07-26 06:20:26,041 | INFO     | cpuconsumptiontime: 53895 s
[2025-07-26 02:20:58] 2025-07-26 06:20:26,041 | INFO     | nevents: 400
[2025-07-26 02:20:58] 2025-07-26 06:20:26,041 | INFO     | neventsw: 0
[2025-07-26 02:20:58] 2025-07-26 06:20:26,041 | INFO     | pid: 557379
[2025-07-26 02:20:58] 2025-07-26 06:20:26,041 | INFO     | pgrp: 557379
[2025-07-26 02:20:58] 2025-07-26 06:20:26,042 | INFO     | corecount: 10
[2025-07-26 02:20:58] 2025-07-26 06:20:26,042 | INFO     | event service: False
[2025-07-26 02:20:58] 2025-07-26 06:20:26,042 | INFO     | sizes: {0: 2397473, 5: 2397735, 11: 2397791, 9157: 2426186, 9158: 2435184, 9160: 2435240, 9166: 2435626}
[2025-07-26 02:20:58] 2025-07-26 06:20:26,042 | INFO     | --------------------------------------------------
[2025-07-26 02:20:58] 2025-07-26 06:20:26,042 | INFO     | 
[2025-07-26 02:20:58] 2025-07-26 06:20:26,042 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-07-26 02:20:58] 2025-07-26 06:20:26,063 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-26 02:20:58] 2025-07-26 06:20:26,063 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-26 02:20:58] 2025-07-26 06:20:26,063 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-26 02:20:58] 2025-07-26 06:20:26,063 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-26 02:20:58] 2025-07-26 06:20:26,063 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-26 02:20:58] 2025-07-26 06:20:26,064 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-26 02:20:58] 2025-07-26 06:20:26,064 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-26 02:20:58] 2025-07-26 06:20:26,064 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-26 02:20:58] 2025-07-26 06:20:26,064 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-26 02:20:58] 2025-07-26 06:20:26,064 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-26 02:20:58] 2025-07-26 06:20:26,064 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-26 02:20:58] 2025-07-26 06:20:26,064 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-26 02:20:58] 2025-07-26 06:20:26,064 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-26 02:20:58] 2025-07-26 06:20:26,064 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-26 02:20:58] 2025-07-26 06:20:26,065 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-26 02:20:58] 2025-07-26 06:20:26,065 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-26 02:20:58] 2025-07-26 06:20:26,065 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-26 02:20:58] 2025-07-26 06:20:26,065 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-26 02:20:58] 2025-07-26 06:20:26,065 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-26 02:20:58] 2025-07-26 06:20:26,065 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-26 02:20:58] 2025-07-26 06:20:26,065 | INFO     | job 6745059003 has completed (purged errors)
[2025-07-26 02:20:58] 2025-07-26 06:20:26,065 | INFO     | overall cleanup function is called
[2025-07-26 02:20:58] 2025-07-26 06:20:27,074 | INFO     | --- collectZombieJob: --- 10, [557379]
[2025-07-26 02:20:58] 2025-07-26 06:20:27,074 | INFO     | zombie collector waiting for pid 557379
[2025-07-26 02:20:58] 2025-07-26 06:20:27,074 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-26 02:20:58] 2025-07-26 06:20:27,074 | INFO     | collected zombie processes
[2025-07-26 02:20:58] 2025-07-26 06:20:27,074 | INFO     | will attempt to kill all subprocesses of pid=557379
[2025-07-26 02:20:58] 2025-07-26 06:20:27,426 | INFO     | process IDs to be killed: [557379] (in reverse order)
[2025-07-26 02:20:58] 2025-07-26 06:20:27,538 | WARNING  | found no corresponding commands to process id(s)
[2025-07-26 02:20:58] 2025-07-26 06:20:27,539 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-26 02:20:58] 2025-07-26 06:20:27,550 | INFO     | did not find any defunct processes belonging to 557379
[2025-07-26 02:20:58] 2025-07-26 06:20:27,565 | INFO     | did not find any defunct processes belonging to 557379
[2025-07-26 02:20:58] 2025-07-26 06:20:27,565 | INFO     | ready for new job
[2025-07-26 02:20:58] 2025-07-26 06:20:27,565 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-26 02:20:58] 2025-07-26 06:20:27,567 | INFO     | ***************************************
[2025-07-26 02:20:58] 2025-07-26 06:20:27,567 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-26 02:20:58] 2025-07-26 06:20:27,568 | INFO     | ***************************************
[2025-07-26 02:20:58] 2025-07-26 06:20:27,568 | INFO     | 
[2025-07-26 02:20:58] 2025-07-26 06:20:27,583 | INFO     | architecture information:
[2025-07-26 02:20:58] 2025-07-26 06:20:27,584 | INFO     | executing command: cat /etc/os-release
[2025-07-26 02:20:58] 2025-07-26 06:20:27,603 | INFO     | cat /etc/os-release:
[2025-07-26 02:20:58] NAME="CentOS Linux"
[2025-07-26 02:20:58] VERSION="7 (Core)"
[2025-07-26 02:20:58] ID="centos"
[2025-07-26 02:20:58] ID_LIKE="rhel fedora"
[2025-07-26 02:20:58] VERSION_ID="7"
[2025-07-26 02:20:58] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-26 02:20:58] ANSI_COLOR="0;31"
[2025-07-26 02:20:58] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-26 02:20:58] HOME_URL="https://www.centos.org/"
[2025-07-26 02:20:58] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-26 02:20:58] 
[2025-07-26 02:20:58] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-26 02:20:58] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-26 02:20:58] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-26 02:20:58] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-26 02:20:58] 
[2025-07-26 02:20:58] 2025-07-26 06:20:27,604 | INFO     | ***************************************
[2025-07-26 02:20:58] 2025-07-26 06:20:28,108 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-07-26 02:20:58] 2025-07-26 06:20:28,130 | INFO     | sufficient remaining disk space (76701237248 B)
[2025-07-26 02:20:58] 2025-07-26 06:20:28,130 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-26 02:20:58] 2025-07-26 06:20:28,130 | INFO     | current server update state: UPDATING_FINAL
[2025-07-26 02:20:58] 2025-07-26 06:20:28,131 | INFO     | update_server=False
[2025-07-26 02:20:58] 2025-07-26 06:20:28,131 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-26 02:20:58] 2025-07-26 06:20:28,131 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-26 02:20:58] 2025-07-26 06:20:28,131 | INFO     | aborting loop
[2025-07-26 02:20:58] 2025-07-26 06:20:28,779 | INFO     | all data control threads have been joined
[2025-07-26 02:20:58] 2025-07-26 06:20:28,787 | INFO     | all payload control threads have been joined
[2025-07-26 02:20:58] 2025-07-26 06:20:29,105 | INFO     | all job control threads have been joined
[2025-07-26 02:20:58] 2025-07-26 06:20:29,137 | INFO     | [job] retrieve thread has finished
[2025-07-26 02:20:58] 2025-07-26 06:20:29,137 | INFO     | [job] job monitor thread has finished
[2025-07-26 02:20:58] 2025-07-26 06:20:29,140 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-26 02:20:58] 2025-07-26 06:20:29,151 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-26 02:20:58] 2025-07-26 06:20:29,486 | INFO     | [payload] validate_post thread has finished
[2025-07-26 02:20:58] 2025-07-26 06:20:29,536 | INFO     | [payload] validate_pre thread has finished
[2025-07-26 02:20:58] 2025-07-26 06:20:29,540 | INFO     | [data] copytool_in thread has finished
[2025-07-26 02:20:58] 2025-07-26 06:20:29,617 | INFO     | [payload] failed_post thread has finished
[2025-07-26 02:20:58] 2025-07-26 06:20:29,784 | INFO     | [data] control thread has finished
[2025-07-26 02:20:58] 2025-07-26 06:20:29,793 | INFO     | [payload] control thread has finished
[2025-07-26 02:20:58] 2025-07-26 06:20:30,011 | INFO     | [job] validate thread has finished
[2025-07-26 02:20:58] 2025-07-26 06:20:30,110 | INFO     | [job] control thread has finished
[2025-07-26 02:20:58] 2025-07-26 06:20:30,182 | INFO     | [job] create_data_payload thread has finished
[2025-07-26 02:20:58] 2025-07-26 06:20:30,182 | INFO     | [payload] execute_payloads thread has finished
[2025-07-26 02:20:58] 2025-07-26 06:20:30,877 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-26 02:20:58] 2025-07-26 06:20:31,146 | INFO     | [data] copytool_out thread has finished
[2025-07-26 02:20:58] 2025-07-26 06:20:31,206 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-26 02:20:58] 2025-07-26 06:20:31,883 | INFO     | [job] queue monitor thread has finished
[2025-07-26 02:20:58] 2025-07-26 06:20:35,211 | INFO     | [data] queue_monitor thread has finished
[2025-07-26 02:20:58] 2025-07-26 06:20:35,885 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139859988559680)>', '<ExcThread(monitor, started 139859360474880)>']
[2025-07-26 02:20:58] 2025-07-26 06:20:40,911 | INFO     | all workflow threads have been joined
[2025-07-26 02:20:58] 2025-07-26 06:20:40,912 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-26 02:20:58] 2025-07-26 06:20:40,912 | INFO     | traces error code: 0
[2025-07-26 02:20:58] 2025-07-26 06:20:40,913 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-26 02:20:58] 2025-07-26 06:20:58,092 | INFO     | PID=550986 has CPU usage=7.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-07-26 02:20:58] 2025-07-26 06:20:58,093 | INFO     | .. there are 25 such processes running
[2025-07-26 02:20:58] 2025-07-26 06:20:58,093 | INFO     | found 0 job(s) in 20 queues
[2025-07-26 02:20:58] 2025-07-26 06:20:58,093 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-26 02:20:58] 2025-07-26 06:20:58,093 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-26 02:20:58] 2025-07-26 06:20:58,093 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-26 02:20:58] 2025-07-26 06:20:58,093 | INFO     | [monitor] control thread has ended
[2025-07-26 02:20:58] 2025-07-26 06:20:58,272 [wrapper] ==== pilot stdout END ====
[2025-07-26 02:20:58] 2025-07-26 06:20:58,276 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-26 02:20:58] 2025-07-26 06:20:58,280 [wrapper] pilotpid: 550986
[2025-07-26 02:20:58] 2025-07-26 06:20:58,283 [wrapper] Pilot exit status: 0
[2025-07-26 02:20:58] 2025-07-26 06:20:58,296 [wrapper] pandaids: 6745059003
[2025-07-26 02:20:58] 2025-07-26 06:20:58,364 [wrapper] cleanup supervisor_pilot  953321 550987
[2025-07-26 02:20:58] 2025-07-26 06:20:58,367 [wrapper] Test setup, not cleaning
[2025-07-26 02:20:58] 2025-07-26 06:20:58,371 [wrapper] apfmon messages muted
[2025-07-26 02:20:58] 2025-07-26 06:20:58,374 [wrapper] ==== wrapper stdout END ====
[2025-07-26 02:20:58] 2025-07-26 06:20:58,377 [wrapper] ==== wrapper stderr END ====
[2025-07-26 02:20:58]  *** Error codes and diagnostics ***
[2025-07-26 02:20:58]     "exeErrorCode": 0,
[2025-07-26 02:20:58]     "exeErrorDiag": "",
[2025-07-26 02:20:58]     "pilotErrorCode": 0,
[2025-07-26 02:20:58]     "pilotErrorDiag": "",
[2025-07-26 02:20:58]  *** Listing of results directory ***
[2025-07-26 02:20:58] total 349604
[2025-07-26 02:20:58] -rw-r--r--. 1 boincer umatlas    530466 Jul 25 13:06 pilot3.tar.gz
[2025-07-26 02:20:58] -rw-r--r--. 1 boincer umatlas      5112 Jul 25 13:21 queuedata.json
[2025-07-26 02:20:58] -rwx------. 1 boincer umatlas     36292 Jul 25 13:22 runpilot2-wrapper.sh
[2025-07-26 02:20:58] -rw-r--r--. 1 boincer umatlas       100 Jul 25 23:47 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-26 02:20:58] -rwxr-xr-x. 1 boincer umatlas      7986 Jul 25 23:47 run_atlas
[2025-07-26 02:20:58] -rw-r--r--. 1 boincer umatlas       105 Jul 25 23:47 job.xml
[2025-07-26 02:20:58] -rw-r--r--. 2 boincer umatlas 143348562 Jul 25 23:47 EVNT.45743347._001387.pool.root.1
[2025-07-26 02:20:58] -rw-r--r--. 2 boincer umatlas     15095 Jul 25 23:47 start_atlas.sh
[2025-07-26 02:20:58] drwxrwx--x. 2 boincer umatlas      4096 Jul 25 23:47 shared
[2025-07-26 02:20:58] -rw-r--r--. 2 boincer umatlas    542892 Jul 25 23:47 input.tar.gz
[2025-07-26 02:20:58] -rw-r--r--. 1 boincer umatlas         0 Jul 25 23:47 boinc_lockfile
[2025-07-26 02:20:58] -rw-r--r--. 1 boincer umatlas      2562 Jul 25 23:47 pandaJob.out
[2025-07-26 02:20:58] -rw-------. 1 boincer umatlas    980001 Jul 25 23:47 agis_schedconf.cvmfs.json
[2025-07-26 02:20:58] -rw-------. 1 boincer umatlas   1593052 Jul 25 23:47 agis_ddmendpoints.agis.ALL.json
[2025-07-26 02:20:58] drwx------. 4 boincer umatlas      4096 Jul 25 23:47 pilot3
[2025-07-26 02:20:58] -rw-r--r--. 1 boincer umatlas      6659 Jul 26 02:11 init_data.xml
[2025-07-26 02:20:58] -rw-------. 1 boincer umatlas 208363741 Jul 26 02:19 HITS.45743349._024406.pool.root.1
[2025-07-26 02:20:58] -rw-r--r--. 1 boincer umatlas       529 Jul 26 02:19 boinc_task_state.xml
[2025-07-26 02:20:58] -rw-------. 1 boincer umatlas      1040 Jul 26 02:20 memory_monitor_summary.json
[2025-07-26 02:20:58] -rw-------. 1 boincer umatlas    374087 Jul 26 02:20 log.45743349._024406.job.log.tgz.1
[2025-07-26 02:20:58] -rw-------. 1 boincer umatlas        95 Jul 26 02:20 pilot_heartbeat.json
[2025-07-26 02:20:58] -rw-------. 1 boincer umatlas      7815 Jul 26 02:20 heartbeat.json
[2025-07-26 02:20:58] -rw-r--r--. 1 boincer umatlas      8192 Jul 26 02:20 boinc_mmap_file
[2025-07-26 02:20:58] -rw-r--r--. 1 boincer umatlas        27 Jul 26 02:20 wrapper_checkpoint.txt
[2025-07-26 02:20:58] -rw-------. 1 boincer umatlas       822 Jul 26 02:20 pilotlog.txt
[2025-07-26 02:20:58] -rw-------. 1 boincer umatlas    827681 Jul 26 02:20 log.45743349._024406.job.log.1
[2025-07-26 02:20:58] -rw-------. 1 boincer umatlas       357 Jul 26 02:20 output.list
[2025-07-26 02:20:58] -rw-r--r--. 1 boincer umatlas       620 Jul 26 02:20 runtime_log
[2025-07-26 02:20:58] -rw-------. 1 boincer umatlas   1218560 Jul 26 02:20 result.tar.gz
[2025-07-26 02:20:58] -rw-r--r--. 1 boincer umatlas      8652 Jul 26 02:20 runtime_log.err
[2025-07-26 02:20:58] -rw-------. 1 boincer umatlas       651 Jul 26 02:20 AeCODmxIbz7n9Rq4apOajLDm4fhM0noT9bVof3QYDmIIzKDmag8nKm.diag
[2025-07-26 02:20:58] -rw-r--r--. 1 boincer umatlas     21274 Jul 26 02:20 stderr.txt
[2025-07-26 02:20:58] HITS file was successfully produced:
[2025-07-26 02:20:58] -rw-------. 1 boincer umatlas 208363741 Jul 26 02:19 shared/HITS.pool.root.1
[2025-07-26 02:20:58]  *** Contents of shared directory: ***
[2025-07-26 02:20:58] total 345220
[2025-07-26 02:20:58] -rw-r--r--. 2 boincer umatlas 143348562 Jul 25 23:47 ATLAS.root_0
[2025-07-26 02:20:58] -rw-r--r--. 2 boincer umatlas     15095 Jul 25 23:47 start_atlas.sh
[2025-07-26 02:20:58] -rw-r--r--. 2 boincer umatlas    542892 Jul 25 23:47 input.tar.gz
[2025-07-26 02:20:58] -rw-------. 1 boincer umatlas 208363741 Jul 26 02:19 HITS.pool.root.1
[2025-07-26 02:20:58] -rw-------. 1 boincer umatlas   1218560 Jul 26 02:20 result.tar.gz
02:21:00 (547351): run_atlas exited; CPU time 54131.371014
02:21:00 (547351): called boinc_finish(0)

</stderr_txt>
]]>

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