Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
00:02:32 (24981): wrapper (7.7.26015): starting
00:02:32 (24981): wrapper: running run_atlas (--nthreads 12)
[2025-07-26 00:02:32] Arguments: --nthreads 12
[2025-07-26 00:02:32] Threads: 12
[2025-07-26 00:02:32] Checking for CVMFS
[2025-07-26 00:02:32] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-26 00:02:32] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-26 00:02:32] Running cvmfs_config stat atlas.cern.ch
[2025-07-26 00:02:33] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-26 00:02:33] 2.11.2.0 3035 110010 97216 148763 0 57 14650560 20275200 1 130560 0 36110970 99.970 10067589 11069 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-07-26 00:02:33] CVMFS is ok
[2025-07-26 00:02:33] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-26 00:02:33] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-26 00:02:33] Further information can be found at the LHC@home message board.
[2025-07-26 00:02:33] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-26 00:02:33] Checking for apptainer binary...
[2025-07-26 00:02:33] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-26 00:02:33] Running /usr/bin/apptainer --version
[2025-07-26 00:02:33] apptainer version 1.3.2-1.el7
[2025-07-26 00:02:33] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-26 00:02:34] c-205-31.aglt2.org
[2025-07-26 00:02:34] apptainer works
[2025-07-26 00:02:34] Set ATHENA_PROC_NUMBER=12
[2025-07-26 00:02:34] Set ATHENA_CORE_NUMBER=12
[2025-07-26 00:02:34] Starting ATLAS job with PandaID=6745062722
[2025-07-26 00:02:34] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-26 01:31:29]  *** The last 200 lines of the pilot log: ***
[2025-07-26 01:31:29]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-07-26 01:31:29]  is_altstaged=None
[2025-07-26 01:31:29]  is_tar=False
[2025-07-26 01:31:29]  lfn=log.45743349._027488.job.log.tgz.1
[2025-07-26 01:31:29]  mtime=0
[2025-07-26 01:31:29]  protocol_id=None
[2025-07-26 01:31:29]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-07-26 01:31:29]  replicas=None
[2025-07-26 01:31:29]  scope=mc23_13p6TeV
[2025-07-26 01:31:29]  status=None
[2025-07-26 01:31:29]  status_code=0
[2025-07-26 01:31:29]  storage_token=
[2025-07-26 01:31:29]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6745062722/log.45743349._027488.job.log.tgz.1
[2025-07-26 01:31:29]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/d1/c1/log.45743349._027488.job.log.tgz.1
[2025-07-26 01:31:29]  workdir=None
[2025-07-26 01:31:29] ]
[2025-07-26 01:31:29] 2025-07-26 05:30:51,062 | INFO     | transferring file log.45743349._027488.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6745062722/log.45743349._027488.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-07-26 01:31:29] 2025-07-26 05:30:51,062 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6745062722/log.45743349._027488.job.log.tgz.1 /tmp/boinchome/slots/0/log.45743349._027488.job
[2025-07-26 01:31:29] 2025-07-26 05:30:51,084 | INFO     | adding to output.list: log.45743349._027488.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/d1/c1/log.45743349._027488.job.log.tg
[2025-07-26 01:31:29] 2025-07-26 05:30:51,085 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-26 01:31:29] 2025-07-26 05:30:51,085 | INFO     | summary of transferred files:
[2025-07-26 01:31:29] 2025-07-26 05:30:51,085 | INFO     |  -- lfn=log.45743349._027488.job.log.tgz.1, status_code=0, status=transferred
[2025-07-26 01:31:29] 2025-07-26 05:30:51,086 | INFO     | stage-out finished correctly
[2025-07-26 01:31:29] 2025-07-26 05:30:51,173 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-26 01:31:29] 2025-07-26 05:30:52,436 | INFO     | job 6745062722 has state=finished
[2025-07-26 01:31:29] 2025-07-26 05:30:52,437 | INFO     | preparing for final server update for job 6745062722 in state='finished'
[2025-07-26 01:31:29] 2025-07-26 05:30:52,504 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2025-07-26 01:31:29] 2025-07-26 05:30:52,504 | INFO     | this job has now completed (state=finished)
[2025-07-26 01:31:29] 2025-07-26 05:30:52,504 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-26 01:31:29] 2025-07-26 05:30:52,505 | INFO     | log transfer has been attempted: DONE
[2025-07-26 01:31:29] 2025-07-26 05:30:52,505 | INFO     | job 6745062722 has finished - writing final server update
[2025-07-26 01:31:29] 2025-07-26 05:30:52,505 | INFO     | total number of processed events: 400 (read)
[2025-07-26 01:31:29] 2025-07-26 05:30:52,506 | INFO     | executing command: lscpu
[2025-07-26 01:31:29] 2025-07-26 05:30:52,532 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-26 01:31:29] 2025-07-26 05:30:52,575 | INFO     | monitor loop #395: job 0:6745062722 is in state 'finished'
[2025-07-26 01:31:29] 2025-07-26 05:30:52,575 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-26 01:31:29] 2025-07-26 05:30:55,078 | INFO     | monitor loop #396: job 0:6745062722 is in state 'finished'
[2025-07-26 01:31:29] 2025-07-26 05:30:55,079 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-26 01:31:29] 2025-07-26 05:30:57,361 | INFO     | CPU arch script returned: x86-64-v2
[2025-07-26 01:31:29] 2025-07-26 05:30:57,364 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1706.9166666666667
[2025-07-26 01:31:29] 2025-07-26 05:30:57,366 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6745062722/memory_monitor_summary.json (trf name=prmon)
[2025-07-26 01:31:29] 2025-07-26 05:30:57,367 | INFO     | extracted standard info from prmon json
[2025-07-26 01:31:29] 2025-07-26 05:30:57,367 | INFO     | extracted standard memory fields from prmon json
[2025-07-26 01:31:29] 2025-07-26 05:30:57,367 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-26 01:31:29] 2025-07-26 05:30:57,367 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-26 01:31:29] 2025-07-26 05:30:57,367 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-26 01:31:29] 2025-07-26 05:30:57,369 | INFO     | fitting pss+swap vs Time
[2025-07-26 01:31:29] 2025-07-26 05:30:57,369 | INFO     | sum of square deviations: 158737860.0
[2025-07-26 01:31:29] 2025-07-26 05:30:57,370 | INFO     | sum of deviations: -929639512.0000001
[2025-07-26 01:31:29] 2025-07-26 05:30:57,370 | INFO     | mean x: 1753505313.5
[2025-07-26 01:31:29] 2025-07-26 05:30:57,370 | INFO     | mean y: 2695956.3
[2025-07-26 01:31:29] 2025-07-26 05:30:57,370 | INFO     | -- intersect: 10272003000.829561
[2025-07-26 01:31:29] 2025-07-26 05:30:57,370 | INFO     | intersect: 10272003000.829561
[2025-07-26 01:31:29] 2025-07-26 05:30:57,370 | INFO     | chi2: 0.08760121389280397
[2025-07-26 01:31:29] 2025-07-26 05:30:57,370 | INFO     | -- intersect: 10272003000.829561
[2025-07-26 01:31:29] 2025-07-26 05:30:57,371 | INFO     | current memory leak: -5.86 B/s (using 80 data points, chi2=0.09)
[2025-07-26 01:31:29] 2025-07-26 05:30:57,371 | INFO     | could have reported an average CPU frequency of 2030 MHz (6 samples)
[2025-07-26 01:31:29] 2025-07-26 05:30:57,371 | INFO     | ..............................
[2025-07-26 01:31:29] 2025-07-26 05:30:57,371 | INFO     | . Timing measurements:
[2025-07-26 01:31:29] 2025-07-26 05:30:57,371 | INFO     | . get job = 0 s
[2025-07-26 01:31:29] 2025-07-26 05:30:57,371 | INFO     | . initial setup = 2 s
[2025-07-26 01:31:29] 2025-07-26 05:30:57,371 | INFO     | . payload setup = 9 s
[2025-07-26 01:31:29] 2025-07-26 05:30:57,372 | INFO     | . stage-in = 0 s
[2025-07-26 01:31:29] 2025-07-26 05:30:57,372 | INFO     | . payload execution = 5252 s
[2025-07-26 01:31:29] 2025-07-26 05:30:57,372 | INFO     | . stage-out = 0 s
[2025-07-26 01:31:29] 2025-07-26 05:30:57,372 | INFO     | . log creation = 0 s
[2025-07-26 01:31:29] 2025-07-26 05:30:57,372 | INFO     | ..............................
[2025-07-26 01:31:29] 2025-07-26 05:30:57,455 | INFO     | 
[2025-07-26 01:31:29] 2025-07-26 05:30:57,455 | INFO     | job summary report
[2025-07-26 01:31:29] 2025-07-26 05:30:57,455 | INFO     | --------------------------------------------------
[2025-07-26 01:31:29] 2025-07-26 05:30:57,455 | INFO     | PanDA job id: 6745062722
[2025-07-26 01:31:29] 2025-07-26 05:30:57,455 | INFO     | task id: 45743349
[2025-07-26 01:31:29] 2025-07-26 05:30:57,455 | INFO     | errors: (none)
[2025-07-26 01:31:29] 2025-07-26 05:30:57,456 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-26 01:31:29] 2025-07-26 05:30:57,456 | INFO     | pilot state: finished 
[2025-07-26 01:31:29] 2025-07-26 05:30:57,456 | INFO     | transexitcode: 0
[2025-07-26 01:31:29] 2025-07-26 05:30:57,456 | INFO     | exeerrorcode: 0
[2025-07-26 01:31:29] 2025-07-26 05:30:57,456 | INFO     | exeerrordiag: 
[2025-07-26 01:31:29] 2025-07-26 05:30:57,456 | INFO     | exitcode: 0
[2025-07-26 01:31:29] 2025-07-26 05:30:57,457 | INFO     | exitmsg: OK
[2025-07-26 01:31:29] 2025-07-26 05:30:57,457 | INFO     | cpuconsumptiontime: 54435 s
[2025-07-26 01:31:29] 2025-07-26 05:30:57,457 | INFO     | nevents: 400
[2025-07-26 01:31:29] 2025-07-26 05:30:57,457 | INFO     | neventsw: 0
[2025-07-26 01:31:29] 2025-07-26 05:30:57,457 | INFO     | pid: 2724
[2025-07-26 01:31:29] 2025-07-26 05:30:57,457 | INFO     | pgrp: 2724
[2025-07-26 01:31:29] 2025-07-26 05:30:57,458 | INFO     | corecount: 12
[2025-07-26 01:31:29] 2025-07-26 05:30:57,458 | INFO     | event service: False
[2025-07-26 01:31:29] 2025-07-26 05:30:57,458 | INFO     | sizes: {0: 2397304, 1: 2397503, 6: 2397765, 11: 2397793, 5265: 2424246, 5267: 2433428, 5274: 2433566}
[2025-07-26 01:31:29] 2025-07-26 05:30:57,458 | INFO     | --------------------------------------------------
[2025-07-26 01:31:29] 2025-07-26 05:30:57,458 | INFO     | 
[2025-07-26 01:31:29] 2025-07-26 05:30:57,458 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-07-26 01:31:29] 2025-07-26 05:30:57,483 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-26 01:31:29] 2025-07-26 05:30:57,484 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-26 01:31:29] 2025-07-26 05:30:57,484 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-26 01:31:29] 2025-07-26 05:30:57,484 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-26 01:31:29] 2025-07-26 05:30:57,484 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-26 01:31:29] 2025-07-26 05:30:57,484 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-26 01:31:29] 2025-07-26 05:30:57,485 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-26 01:31:29] 2025-07-26 05:30:57,485 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-26 01:31:29] 2025-07-26 05:30:57,485 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-26 01:31:29] 2025-07-26 05:30:57,485 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-26 01:31:29] 2025-07-26 05:30:57,485 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-26 01:31:29] 2025-07-26 05:30:57,485 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-26 01:31:29] 2025-07-26 05:30:57,485 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-26 01:31:29] 2025-07-26 05:30:57,486 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-26 01:31:29] 2025-07-26 05:30:57,486 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-26 01:31:29] 2025-07-26 05:30:57,486 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-26 01:31:29] 2025-07-26 05:30:57,486 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-26 01:31:29] 2025-07-26 05:30:57,486 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-26 01:31:29] 2025-07-26 05:30:57,486 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-26 01:31:29] 2025-07-26 05:30:57,487 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-26 01:31:29] 2025-07-26 05:30:57,487 | INFO     | job 6745062722 has completed (purged errors)
[2025-07-26 01:31:29] 2025-07-26 05:30:57,487 | INFO     | overall cleanup function is called
[2025-07-26 01:31:29] 2025-07-26 05:30:58,495 | INFO     | --- collectZombieJob: --- 10, [2724]
[2025-07-26 01:31:29] 2025-07-26 05:30:58,496 | INFO     | zombie collector waiting for pid 2724
[2025-07-26 01:31:29] 2025-07-26 05:30:58,496 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-26 01:31:29] 2025-07-26 05:30:58,496 | INFO     | collected zombie processes
[2025-07-26 01:31:29] 2025-07-26 05:30:58,496 | INFO     | will attempt to kill all subprocesses of pid=2724
[2025-07-26 01:31:29] 2025-07-26 05:30:58,587 | INFO     | process IDs to be killed: [2724] (in reverse order)
[2025-07-26 01:31:29] 2025-07-26 05:30:58,645 | WARNING  | found no corresponding commands to process id(s)
[2025-07-26 01:31:29] 2025-07-26 05:30:58,646 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-26 01:31:29] 2025-07-26 05:30:58,649 | INFO     | did not find any defunct processes belonging to 2724
[2025-07-26 01:31:29] 2025-07-26 05:30:58,653 | INFO     | did not find any defunct processes belonging to 2724
[2025-07-26 01:31:29] 2025-07-26 05:30:58,653 | INFO     | ready for new job
[2025-07-26 01:31:29] 2025-07-26 05:30:58,654 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-26 01:31:29] 2025-07-26 05:30:58,655 | INFO     | ***************************************
[2025-07-26 01:31:29] 2025-07-26 05:30:58,655 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-26 01:31:29] 2025-07-26 05:30:58,655 | INFO     | ***************************************
[2025-07-26 01:31:29] 2025-07-26 05:30:58,656 | INFO     | 
[2025-07-26 01:31:29] 2025-07-26 05:30:58,656 | INFO     | architecture information:
[2025-07-26 01:31:29] 2025-07-26 05:30:58,657 | INFO     | executing command: cat /etc/os-release
[2025-07-26 01:31:29] 2025-07-26 05:30:58,671 | INFO     | cat /etc/os-release:
[2025-07-26 01:31:29] NAME="CentOS Linux"
[2025-07-26 01:31:29] VERSION="7 (Core)"
[2025-07-26 01:31:29] ID="centos"
[2025-07-26 01:31:29] ID_LIKE="rhel fedora"
[2025-07-26 01:31:29] VERSION_ID="7"
[2025-07-26 01:31:29] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-26 01:31:29] ANSI_COLOR="0;31"
[2025-07-26 01:31:29] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-26 01:31:29] HOME_URL="https://www.centos.org/"
[2025-07-26 01:31:29] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-26 01:31:29] 
[2025-07-26 01:31:29] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-26 01:31:29] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-26 01:31:29] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-26 01:31:29] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-26 01:31:29] 
[2025-07-26 01:31:29] 2025-07-26 05:30:58,671 | INFO     | ***************************************
[2025-07-26 01:31:29] 2025-07-26 05:30:59,174 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-07-26 01:31:29] 2025-07-26 05:30:59,191 | INFO     | sufficient remaining disk space (29513220096 B)
[2025-07-26 01:31:29] 2025-07-26 05:30:59,192 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-26 01:31:29] 2025-07-26 05:30:59,192 | INFO     | current server update state: UPDATING_FINAL
[2025-07-26 01:31:29] 2025-07-26 05:30:59,192 | INFO     | update_server=False
[2025-07-26 01:31:29] 2025-07-26 05:30:59,192 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-26 01:31:29] 2025-07-26 05:30:59,193 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-26 01:31:29] 2025-07-26 05:30:59,193 | INFO     | aborting loop
[2025-07-26 01:31:29] 2025-07-26 05:30:59,193 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-26 01:31:29] 2025-07-26 05:30:59,193 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-26 01:31:29] 2025-07-26 05:30:59,699 | INFO     | all payload control threads have been joined
[2025-07-26 01:31:29] 2025-07-26 05:31:00,095 | INFO     | all data control threads have been joined
[2025-07-26 01:31:29] 2025-07-26 05:31:00,196 | INFO     | [job] job monitor thread has finished
[2025-07-26 01:31:29] 2025-07-26 05:31:00,197 | INFO     | [job] queue monitor thread has finished
[2025-07-26 01:31:29] 2025-07-26 05:31:00,198 | INFO     | [job] retrieve thread has finished
[2025-07-26 01:31:29] 2025-07-26 05:31:00,544 | INFO     | [payload] failed_post thread has finished
[2025-07-26 01:31:29] 2025-07-26 05:31:00,561 | INFO     | [job] validate thread has finished
[2025-07-26 01:31:29] 2025-07-26 05:31:00,705 | INFO     | [payload] control thread has finished
[2025-07-26 01:31:29] 2025-07-26 05:31:00,748 | INFO     | [payload] execute_payloads thread has finished
[2025-07-26 01:31:29] 2025-07-26 05:31:00,859 | INFO     | all job control threads have been joined
[2025-07-26 01:31:29] 2025-07-26 05:31:01,061 | INFO     | [job] create_data_payload thread has finished
[2025-07-26 01:31:29] 2025-07-26 05:31:01,100 | INFO     | [data] control thread has finished
[2025-07-26 01:31:29] 2025-07-26 05:31:01,157 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-26 01:31:29] 2025-07-26 05:31:01,194 | INFO     | [data] copytool_out thread has finished
[2025-07-26 01:31:29] 2025-07-26 05:31:01,321 | INFO     | [payload] validate_pre thread has finished
[2025-07-26 01:31:29] 2025-07-26 05:31:01,520 | INFO     | [data] copytool_in thread has finished
[2025-07-26 01:31:29] 2025-07-26 05:31:01,526 | INFO     | [payload] validate_post thread has finished
[2025-07-26 01:31:29] 2025-07-26 05:31:01,767 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-26 01:31:29] 2025-07-26 05:31:01,862 | INFO     | [job] control thread has finished
[2025-07-26 01:31:29] 2025-07-26 05:31:05,768 | INFO     | [data] queue_monitor thread has finished
[2025-07-26 01:31:29] 2025-07-26 05:31:07,378 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140153650689856)>', '<ExcThread(monitor, started 140152542316288)>']
[2025-07-26 01:31:29] 2025-07-26 05:31:12,392 | INFO     | all workflow threads have been joined
[2025-07-26 01:31:29] 2025-07-26 05:31:12,393 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-26 01:31:29] 2025-07-26 05:31:12,393 | INFO     | traces error code: 0
[2025-07-26 01:31:29] 2025-07-26 05:31:12,394 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-26 01:31:29] 2025-07-26 05:31:29,086 | INFO     | PID=28573 has CPU usage=4.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-07-26 01:31:29] 2025-07-26 05:31:29,087 | INFO     | found 0 job(s) in 20 queues
[2025-07-26 01:31:29] 2025-07-26 05:31:29,087 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-26 01:31:29] 2025-07-26 05:31:29,087 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-26 01:31:29] 2025-07-26 05:31:29,087 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-26 01:31:29] 2025-07-26 05:31:29,087 | INFO     | [monitor] control thread has ended
[2025-07-26 01:31:29] 2025-07-26 05:31:29,179 [wrapper] ==== pilot stdout END ====
[2025-07-26 01:31:29] 2025-07-26 05:31:29,183 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-26 01:31:29] 2025-07-26 05:31:29,187 [wrapper] pilotpid: 28573
[2025-07-26 01:31:29] 2025-07-26 05:31:29,191 [wrapper] Pilot exit status: 0
[2025-07-26 01:31:29] 2025-07-26 05:31:29,206 [wrapper] pandaids: 6745062722
[2025-07-26 01:31:29] 2025-07-26 05:31:29,249 [wrapper] cleanup supervisor_pilot 23423 28574
[2025-07-26 01:31:29] 2025-07-26 05:31:29,253 [wrapper] Test setup, not cleaning
[2025-07-26 01:31:29] 2025-07-26 05:31:29,257 [wrapper] apfmon messages muted
[2025-07-26 01:31:29] 2025-07-26 05:31:29,262 [wrapper] ==== wrapper stdout END ====
[2025-07-26 01:31:29] 2025-07-26 05:31:29,266 [wrapper] ==== wrapper stderr END ====
[2025-07-26 01:31:29]  *** Error codes and diagnostics ***
[2025-07-26 01:31:29]     "exeErrorCode": 0,
[2025-07-26 01:31:29]     "exeErrorDiag": "",
[2025-07-26 01:31:29]     "pilotErrorCode": 0,
[2025-07-26 01:31:29]     "pilotErrorDiag": "",
[2025-07-26 01:31:29]  *** Listing of results directory ***
[2025-07-26 01:31:29] total 354772
[2025-07-26 01:31:29] -rw-r--r-- 1 boincer umatlas    530466 Jul 25 17:12 pilot3.tar.gz
[2025-07-26 01:31:29] -rwx------ 1 boincer umatlas     36292 Jul 25 17:23 runpilot2-wrapper.sh
[2025-07-26 01:31:29] -rw-r--r-- 1 boincer umatlas      5112 Jul 25 17:23 queuedata.json
[2025-07-26 01:31:29] -rw-r--r-- 1 boincer umatlas       100 Jul 26 00:02 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-26 01:31:29] -rwxr-xr-x 1 boincer umatlas      7986 Jul 26 00:02 run_atlas
[2025-07-26 01:31:29] -rw-r--r-- 1 boincer umatlas       105 Jul 26 00:02 job.xml
[2025-07-26 01:31:29] -rw-r--r-- 2 boincer umatlas 145852723 Jul 26 00:02 EVNT.45743347._001525.pool.root.1
[2025-07-26 01:31:29] -rw-r--r-- 2 boincer umatlas     15095 Jul 26 00:02 start_atlas.sh
[2025-07-26 01:31:29] drwxrwx--x 2 boincer umatlas      4096 Jul 26 00:02 shared
[2025-07-26 01:31:29] -rw-r--r-- 2 boincer umatlas    542897 Jul 26 00:02 input.tar.gz
[2025-07-26 01:31:29] -rw-r--r-- 1 boincer umatlas         0 Jul 26 00:02 boinc_lockfile
[2025-07-26 01:31:29] -rw-r--r-- 1 boincer umatlas      2563 Jul 26 00:02 pandaJob.out
[2025-07-26 01:31:29] -rw------- 1 boincer umatlas    980001 Jul 26 00:02 agis_schedconf.cvmfs.json
[2025-07-26 01:31:29] -rw------- 1 boincer umatlas   1593052 Jul 26 00:02 agis_ddmendpoints.agis.ALL.json
[2025-07-26 01:31:29] drwx------ 4 boincer umatlas      4096 Jul 26 00:02 pilot3
[2025-07-26 01:31:29] -rw-r--r-- 1 boincer umatlas      5868 Jul 26 01:27 init_data.xml
[2025-07-26 01:31:29] -rw------- 1 boincer umatlas 211817274 Jul 26 01:30 HITS.45743349._027488.pool.root.1
[2025-07-26 01:31:29] -rw-r--r-- 1 boincer umatlas       529 Jul 26 01:30 boinc_task_state.xml
[2025-07-26 01:31:29] -rw------- 1 boincer umatlas      1050 Jul 26 01:30 memory_monitor_summary.json
[2025-07-26 01:31:29] -rw------- 1 boincer umatlas    368465 Jul 26 01:30 log.45743349._027488.job.log.tgz.1
[2025-07-26 01:31:29] -rw------- 1 boincer umatlas        95 Jul 26 01:30 pilot_heartbeat.json
[2025-07-26 01:31:29] -rw------- 1 boincer umatlas      7848 Jul 26 01:30 heartbeat.json
[2025-07-26 01:31:29] -rw-r--r-- 1 boincer umatlas      8192 Jul 26 01:31 boinc_mmap_file
[2025-07-26 01:31:29] -rw-r--r-- 1 boincer umatlas        27 Jul 26 01:31 wrapper_checkpoint.txt
[2025-07-26 01:31:29] -rw------- 1 boincer umatlas       745 Jul 26 01:31 pilotlog.txt
[2025-07-26 01:31:29] -rw------- 1 boincer umatlas    498749 Jul 26 01:31 log.45743349._027488.job.log.1
[2025-07-26 01:31:29] -rw------- 1 boincer umatlas       357 Jul 26 01:31 output.list
[2025-07-26 01:31:29] -rw-r--r-- 1 boincer umatlas       620 Jul 26 01:31 runtime_log
[2025-07-26 01:31:29] -rw------- 1 boincer umatlas    890880 Jul 26 01:31 result.tar.gz
[2025-07-26 01:31:29] -rw-r--r-- 1 boincer umatlas      8662 Jul 26 01:31 runtime_log.err
[2025-07-26 01:31:29] -rw------- 1 boincer umatlas       659 Jul 26 01:31 8HHMDmP4ez7n9Rq4apOajLDm4fhM0noT9bVof3QYDmwezKDm0LCPYo.diag
[2025-07-26 01:31:29] -rw-r--r-- 1 boincer umatlas     21434 Jul 26 01:31 stderr.txt
[2025-07-26 01:31:29] HITS file was successfully produced:
[2025-07-26 01:31:29] -rw------- 1 boincer umatlas 211817274 Jul 26 01:30 shared/HITS.pool.root.1
[2025-07-26 01:31:29]  *** Contents of shared directory: ***
[2025-07-26 01:31:29] total 350720
[2025-07-26 01:31:29] -rw-r--r-- 2 boincer umatlas 145852723 Jul 26 00:02 ATLAS.root_0
[2025-07-26 01:31:29] -rw-r--r-- 2 boincer umatlas     15095 Jul 26 00:02 start_atlas.sh
[2025-07-26 01:31:29] -rw-r--r-- 2 boincer umatlas    542897 Jul 26 00:02 input.tar.gz
[2025-07-26 01:31:29] -rw------- 1 boincer umatlas 211817274 Jul 26 01:30 HITS.pool.root.1
[2025-07-26 01:31:29] -rw------- 1 boincer umatlas    890880 Jul 26 01:31 result.tar.gz
01:31:30 (24981): run_atlas exited; CPU time 54406.023863
01:31:30 (24981): called boinc_finish(0)

</stderr_txt>
]]>

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