Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
20:46:08 (1756845): wrapper (7.7.26015): starting
20:46:08 (1756845): wrapper: running run_atlas (--nthreads 12)
[2025-07-25 20:46:08] Arguments: --nthreads 12
[2025-07-25 20:46:08] Threads: 12
[2025-07-25 20:46:08] Checking for CVMFS
[2025-07-25 20:46:08] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-25 20:46:08] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-25 20:46:08] Running cvmfs_config stat atlas.cern.ch
[2025-07-25 20:46:08] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-25 20:46:08] 2.11.5.0 6647 35179 207992 148763 1 682 33395478 45568000 19296 130560 0 272985349 99.752 198562380 27719 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-07-25 20:46:08] CVMFS is ok
[2025-07-25 20:46:08] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-25 20:46:08] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-25 20:46:08] Further information can be found at the LHC@home message board.
[2025-07-25 20:46:08] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-25 20:46:08] Checking for apptainer binary...
[2025-07-25 20:46:08] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-25 20:46:08] Running /usr/bin/apptainer --version
[2025-07-25 20:46:08] apptainer version 1.4.1-1.el9
[2025-07-25 20:46:08] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-25 20:46:09] wns0055.triumf.lcg
[2025-07-25 20:46:09] apptainer works
[2025-07-25 20:46:09] Set ATHENA_PROC_NUMBER=12
[2025-07-25 20:46:09] Set ATHENA_CORE_NUMBER=12
[2025-07-25 20:46:09] Starting ATLAS job with PandaID=6745067699
[2025-07-25 20:46:09] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-25 20:49:42]  *** The last 200 lines of the pilot log: ***
[2025-07-25 20:49:42] 2025-07-26 03:49:09,581 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-25 20:49:42] 2025-07-26 03:49:09,581 | WARNING  | found no stored workdir sizes
[2025-07-25 20:49:42] 2025-07-26 03:49:09,581 | INFO     | will not add max space = 0 B to job metrics
[2025-07-25 20:49:42] 2025-07-26 03:49:09,582 | WARNING  | wrong length of table data, x=[1753501609.0], y=[1671.0] (must be same and length>=4)
[2025-07-25 20:49:42] 2025-07-26 03:49:09,582 | INFO     | could have reported an average CPU frequency of 2589 MHz (4 samples)
[2025-07-25 20:49:42] 2025-07-26 03:49:09,582 | INFO     | ..............................
[2025-07-25 20:49:42] 2025-07-26 03:49:09,582 | INFO     | . Timing measurements:
[2025-07-25 20:49:42] 2025-07-26 03:49:09,582 | INFO     | . get job = 0 s
[2025-07-25 20:49:42] 2025-07-26 03:49:09,582 | INFO     | . initial setup = 3 s
[2025-07-25 20:49:42] 2025-07-26 03:49:09,582 | INFO     | . payload setup = 5 s
[2025-07-25 20:49:42] 2025-07-26 03:49:09,582 | INFO     | . stage-in = 0 s
[2025-07-25 20:49:42] 2025-07-26 03:49:09,582 | INFO     | . payload execution = 18 s
[2025-07-25 20:49:42] 2025-07-26 03:49:09,582 | INFO     | . stage-out = 0 s
[2025-07-25 20:49:42] 2025-07-26 03:49:09,582 | INFO     | . log creation = 0 s
[2025-07-25 20:49:42] 2025-07-26 03:49:09,582 | INFO     | ..............................
[2025-07-25 20:49:42] 2025-07-26 03:49:09,582 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-07-25 20:49:42] 2025-07-26 03:49:09,583 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6745067699/pilotlog.txt
[2025-07-25 20:49:42] 2025-07-26 03:49:09,696 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-07-25 20:49:42] - Log from pilotlog.txt -
[2025-07-25 20:49:42] 2025-07-26 03:49:09,580 | INFO     | extracted standard memory fields from prmon json
[2025-07-25 20:49:42] 2025-07-26 03:49:09,580 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-25 20:49:42] 2025-07-26 03:49:09,581 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-25 20:49:42] 2025-07-26 03:49:09,581 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-25 20:49:42] 2025-07-26 03:49:09,581 | WARNING  | found no stored workdir sizes
[2025-07-25 20:49:42] 2025-07-26 03:49:09,581 | INFO     | will not add max space = 0 B to job metrics
[2025-07-25 20:49:42] 2025-07-26 03:49:09,582 | WARNING  | wrong length of table data, x=[1753501609.0], y=[1671.0] (must be same and length>=4)
[2025-07-25 20:49:42] 2025-07-26 03:49:09,582 | INFO     | could have reported an average CPU frequency of 2589 MHz (4 samples)
[2025-07-25 20:49:42] 2025-07-26 03:49:09,582 | INFO     | ..............................
[2025-07-25 20:49:42] 2025-07-26 03:49:09,582 | INFO     | . Timing measurements:
[2025-07-25 20:49:42] 2025-07-26 03:49:09,582 | INFO     | . get job = 0 s
[2025-07-25 20:49:42] 2025-07-26 03:49:09,582 | INFO     | . initial setup = 3 s
[2025-07-25 20:49:42] 2025-07-26 03:49:09,582 | INFO     | . payload setup = 5 s
[2025-07-25 20:49:42] 2025-07-26 03:49:09,582 | INFO     | . stage-in = 0 s
[2025-07-25 20:49:42] 2025-07-26 03:49:09,582 | INFO     | . payload execution = 18 s
[2025-07-25 20:49:42] 2025-07-26 03:49:09,582 | INFO     | . stage-out = 0 s
[2025-07-25 20:49:42] 2025-07-26 03:49:09,582 | INFO     | . log creation = 0 s
[2025-07-25 20:49:42] 2025-07-26 03:49:09,582 | INFO     | ..............................
[2025-07-25 20:49:42] 2025-07-26 03:49:09,582 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-07-25 20:49:42] 2025-07-26 03:49:09,583 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6745067699/pilotlog.txt
[2025-07-25 20:49:42] 2025-07-26 03:49:09,705 | WARNING  | 
[2025-07-25 20:49:42] [begin log extracts]
[2025-07-25 20:49:42] - Log from pilotlog.txt -
[2025-07-25 20:49:42] 2025-07-26 03:49:09,580 | INFO     | extracted standard memory fields from prmon json
[2025-07-25 20:49:42] 2025-07-26 03:49:09,580 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-25 20:49:42] 2025-07-26 03:49:09,581 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-25 20:49:42] 2025-07-26 03:49:09,581 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-25 20:49:42] 2025-07-26 03:49:09,581 | WARNING  | found no stored workdir sizes
[2025-07-25 20:49:42] 2025-07-26 03:49:09,581 | INFO     | will not add max space = 0 B to job metrics
[2025-07-25 20:49:42] 2025-07-26 03:49:09,582 | WARNING  | wrong length of table data, x=[1753501609.0], y=[1671.0] (must be same and length>=4)
[2025-07-25 20:49:42] 2025-07-26 03:49:09,582 | INFO     | could have reported an average CPU frequency of 2589 MHz (4 samples)
[2025-07-25 20:49:42] 2025-07-26 03:49:09,582 | INFO     | ..............................
[2025-07-25 20:49:42] 2025-07-26 03:49:09,582 | INFO     | . Timing measurements:
[2025-07-25 20:49:42] 2025-07-26 03:49:09,582 | INFO     | . get job = 0 s
[2025-07-25 20:49:42] 2025-07-26 03:49:09,582 | INFO     | . initial setup = 3 s
[2025-07-25 20:49:42] 2025-07-26 03:49:09,582 | INFO     | . payload setup = 5 s
[2025-07-25 20:49:42] 2025-07-26 03:49:09,582 | INFO     | . stage-in = 0 s
[2025-07-25 20:49:42] 2025-07-26 03:49:09,582 | INFO     | . payload execution = 18 s
[2025-07-25 20:49:42] 2025-07-26 03:49:09,582 | INFO     | . stage-out = 0 s
[2025-07-25 20:49:42] 2025-07-26 03:49:09,582 | INFO     | . log creation = 0 s
[2025-07-25 20:49:42] 2025-07-26 03:49:09,582 | INFO     | ..............................
[2025-07-25 20:49:42] 2025-07-26 03:49:09,582 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-07-25 20:49:42] 2025-07-26 03:49:09,583 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6745067699/pilotlog.txt
[2025-07-25 20:49:42] [end log extracts]
[2025-07-25 20:49:42] 2025-07-26 03:49:09,706 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-07-25 20:49:42] 2025-07-26 03:49:09,706 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-07-25 20:49:42] 2025-07-26 03:49:09,764 | INFO     | 
[2025-07-25 20:49:42] 2025-07-26 03:49:09,764 | INFO     | job summary report
[2025-07-25 20:49:42] 2025-07-26 03:49:09,765 | INFO     | --------------------------------------------------
[2025-07-25 20:49:42] 2025-07-26 03:49:09,765 | INFO     | PanDA job id: 6745067699
[2025-07-25 20:49:42] 2025-07-26 03:49:09,765 | INFO     | task id: 45743349
[2025-07-25 20:49:42] 2025-07-26 03:49:09,765 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-07-25 20:46:57,997 CRITICAL Transform executor raised TransformValidationExceptio
[2025-07-25 20:49:42] 2025-07-26 03:49:09,765 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-25 20:49:42] 2025-07-26 03:49:09,765 | INFO     | pilot state: failed 
[2025-07-25 20:49:42] 2025-07-26 03:49:09,765 | INFO     | transexitcode: 65
[2025-07-25 20:49:42] 2025-07-26 03:49:09,765 | INFO     | exeerrorcode: 65
[2025-07-25 20:49:42] 2025-07-26 03:49:09,765 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2025-07-25 20:49:42] 2025-07-26 03:49:09,765 | INFO     | exitcode: 65
[2025-07-25 20:49:42] 2025-07-26 03:49:09,765 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2025-07-25 20:49:42] 2025-07-26 03:49:09,765 | INFO     | cpuconsumptiontime: 16 s
[2025-07-25 20:49:42] 2025-07-26 03:49:09,765 | INFO     | nevents: 0
[2025-07-25 20:49:42] 2025-07-26 03:49:09,765 | INFO     | neventsw: 0
[2025-07-25 20:49:42] 2025-07-26 03:49:09,765 | INFO     | pid: 1775334
[2025-07-25 20:49:42] 2025-07-26 03:49:09,765 | INFO     | pgrp: 1775334
[2025-07-25 20:49:42] 2025-07-26 03:49:09,765 | INFO     | corecount: 12
[2025-07-25 20:49:42] 2025-07-26 03:49:09,765 | INFO     | event service: False
[2025-07-25 20:49:42] 2025-07-26 03:49:09,765 | INFO     | sizes: {0: 2397472, 4: 2397734, 11: 2397762, 28: 2421081, 29: 2425373, 32: 2425401, 152: 2425695}
[2025-07-25 20:49:42] 2025-07-26 03:49:09,765 | INFO     | --------------------------------------------------
[2025-07-25 20:49:42] 2025-07-26 03:49:09,765 | INFO     | 
[2025-07-25 20:49:42] 2025-07-26 03:49:09,766 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-07-25 20:49:42] 2025-07-26 03:49:09,789 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-25 20:49:42] 2025-07-26 03:49:09,789 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-25 20:49:42] 2025-07-26 03:49:09,789 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-25 20:49:42] 2025-07-26 03:49:09,789 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-25 20:49:42] 2025-07-26 03:49:09,789 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-25 20:49:42] 2025-07-26 03:49:09,789 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-25 20:49:42] 2025-07-26 03:49:09,789 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-25 20:49:42] 2025-07-26 03:49:09,789 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-25 20:49:42] 2025-07-26 03:49:09,789 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-25 20:49:42] 2025-07-26 03:49:09,790 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-25 20:49:42] 2025-07-26 03:49:09,790 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-25 20:49:42] 2025-07-26 03:49:09,790 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-25 20:49:42] 2025-07-26 03:49:09,790 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-25 20:49:42] 2025-07-26 03:49:09,790 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-25 20:49:42] 2025-07-26 03:49:09,790 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-25 20:49:42] 2025-07-26 03:49:09,790 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-25 20:49:42] 2025-07-26 03:49:09,790 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-25 20:49:42] 2025-07-26 03:49:09,790 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-25 20:49:42] 2025-07-26 03:49:09,790 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-25 20:49:42] 2025-07-26 03:49:09,790 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-25 20:49:42] 2025-07-26 03:49:09,790 | INFO     | job 6745067699 has completed (purged errors)
[2025-07-25 20:49:42] 2025-07-26 03:49:09,790 | INFO     | overall cleanup function is called
[2025-07-25 20:49:42] 2025-07-26 03:49:10,796 | INFO     | --- collectZombieJob: --- 10, [1775334]
[2025-07-25 20:49:42] 2025-07-26 03:49:10,796 | INFO     | zombie collector waiting for pid 1775334
[2025-07-25 20:49:42] 2025-07-26 03:49:10,796 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-25 20:49:42] 2025-07-26 03:49:10,796 | INFO     | collected zombie processes
[2025-07-25 20:49:42] 2025-07-26 03:49:10,796 | INFO     | will attempt to kill all subprocesses of pid=1775334
[2025-07-25 20:49:42] 2025-07-26 03:49:11,014 | INFO     | process IDs to be killed: [1775334] (in reverse order)
[2025-07-25 20:49:42] 2025-07-26 03:49:11,096 | WARNING  | found no corresponding commands to process id(s)
[2025-07-25 20:49:42] 2025-07-26 03:49:11,097 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-25 20:49:42] 2025-07-26 03:49:11,106 | INFO     | did not find any defunct processes belonging to 1775334
[2025-07-25 20:49:42] 2025-07-26 03:49:11,115 | INFO     | did not find any defunct processes belonging to 1775334
[2025-07-25 20:49:42] 2025-07-26 03:49:11,116 | INFO     | ready for new job
[2025-07-25 20:49:42] 2025-07-26 03:49:11,116 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-25 20:49:42] 2025-07-26 03:49:11,117 | INFO     | ***************************************
[2025-07-25 20:49:42] 2025-07-26 03:49:11,117 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-25 20:49:42] 2025-07-26 03:49:11,117 | INFO     | ***************************************
[2025-07-25 20:49:42] 2025-07-26 03:49:11,117 | INFO     | 
[2025-07-25 20:49:42] 2025-07-26 03:49:11,119 | INFO     | architecture information:
[2025-07-25 20:49:42] 2025-07-26 03:49:11,119 | INFO     | executing command: cat /etc/os-release
[2025-07-25 20:49:42] 2025-07-26 03:49:11,130 | INFO     | cat /etc/os-release:
[2025-07-25 20:49:42] NAME="CentOS Linux"
[2025-07-25 20:49:42] VERSION="7 (Core)"
[2025-07-25 20:49:42] ID="centos"
[2025-07-25 20:49:42] ID_LIKE="rhel fedora"
[2025-07-25 20:49:42] VERSION_ID="7"
[2025-07-25 20:49:42] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-25 20:49:42] ANSI_COLOR="0;31"
[2025-07-25 20:49:42] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-25 20:49:42] HOME_URL="https://www.centos.org/"
[2025-07-25 20:49:42] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-25 20:49:42] 
[2025-07-25 20:49:42] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-25 20:49:42] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-25 20:49:42] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-25 20:49:42] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-25 20:49:42] 
[2025-07-25 20:49:42] 2025-07-26 03:49:11,130 | INFO     | ***************************************
[2025-07-25 20:49:42] 2025-07-26 03:49:11,631 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-07-25 20:49:42] 2025-07-26 03:49:11,643 | INFO     | sufficient remaining disk space (1749030010880 B)
[2025-07-25 20:49:42] 2025-07-26 03:49:11,644 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-25 20:49:42] 2025-07-26 03:49:11,644 | INFO     | current server update state: UPDATING_FINAL
[2025-07-25 20:49:42] 2025-07-26 03:49:11,644 | INFO     | update_server=False
[2025-07-25 20:49:42] 2025-07-26 03:49:11,644 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-25 20:49:42] 2025-07-26 03:49:11,644 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-25 20:49:42] 2025-07-26 03:49:11,939 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-25 20:49:42] 2025-07-26 03:49:11,939 | INFO     | aborting loop
[2025-07-25 20:49:42] 2025-07-26 03:49:12,350 | INFO     | all data control threads have been joined
[2025-07-25 20:49:42] 2025-07-26 03:49:12,441 | INFO     | all payload control threads have been joined
[2025-07-25 20:49:42] 2025-07-26 03:49:12,612 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-25 20:49:42] 2025-07-26 03:49:12,649 | INFO     | [job] retrieve thread has finished
[2025-07-25 20:49:42] 2025-07-26 03:49:12,650 | INFO     | [job] queue monitor thread has finished
[2025-07-25 20:49:42] 2025-07-26 03:49:12,947 | INFO     | [job] job monitor thread has finished
[2025-07-25 20:49:42] 2025-07-26 03:49:12,978 | INFO     | all job control threads have been joined
[2025-07-25 20:49:42] 2025-07-26 03:49:13,015 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-25 20:49:42] 2025-07-26 03:49:13,119 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-25 20:49:42] 2025-07-26 03:49:13,320 | INFO     | [payload] validate_post thread has finished
[2025-07-25 20:49:42] 2025-07-26 03:49:13,355 | INFO     | [data] control thread has finished
[2025-07-25 20:49:42] 2025-07-26 03:49:13,446 | INFO     | [payload] control thread has finished
[2025-07-25 20:49:42] 2025-07-26 03:49:13,642 | INFO     | [payload] execute_payloads thread has finished
[2025-07-25 20:49:42] 2025-07-26 03:49:13,823 | INFO     | [data] copytool_in thread has finished
[2025-07-25 20:49:42] 2025-07-26 03:49:13,851 | INFO     | [job] validate thread has finished
[2025-07-25 20:49:42] 2025-07-26 03:49:13,893 | INFO     | [job] create_data_payload thread has finished
[2025-07-25 20:49:42] 2025-07-26 03:49:13,983 | INFO     | [job] control thread has finished
[2025-07-25 20:49:42] 2025-07-26 03:49:14,034 | INFO     | [payload] validate_pre thread has finished
[2025-07-25 20:49:42] 2025-07-26 03:49:14,074 | INFO     | [payload] failed_post thread has finished
[2025-07-25 20:49:42] 2025-07-26 03:49:14,621 | INFO     | [data] copytool_out thread has finished
[2025-07-25 20:49:42] 2025-07-26 03:49:17,022 | INFO     | [data] queue_monitor thread has finished
[2025-07-25 20:49:42] 2025-07-26 03:49:17,072 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140668199880512)>', '<ExcThread(monitor, started 140667787388672)>']
[2025-07-25 20:49:42] 2025-07-26 03:49:22,097 | INFO     | all workflow threads have been joined
[2025-07-25 20:49:42] 2025-07-26 03:49:22,097 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-25 20:49:42] 2025-07-26 03:49:22,097 | INFO     | traces error code: 0
[2025-07-25 20:49:42] 2025-07-26 03:49:22,097 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-25 20:49:42] 2025-07-26 03:49:42,423 | INFO     | PID=1765871 has CPU usage=1.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-25 20:49:42] 2025-07-26 03:49:42,423 | INFO     | .. there are 42 such processes running
[2025-07-25 20:49:42] 2025-07-26 03:49:42,425 | INFO     | found 0 job(s) in 20 queues
[2025-07-25 20:49:42] 2025-07-26 03:49:42,425 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-25 20:49:42] 2025-07-26 03:49:42,425 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-25 20:49:42] 2025-07-26 03:49:42,425 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-25 20:49:42] 2025-07-26 03:49:42,425 | CRITICAL | thread 'MainThread' is not alive
[2025-07-25 20:49:42] 2025-07-26 03:49:42,425 | INFO     | [monitor] control thread has ended
[2025-07-25 20:49:42] 2025-07-26 03:49:42,592 [wrapper] ==== pilot stdout END ====
[2025-07-25 20:49:42] 2025-07-26 03:49:42,611 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-25 20:49:42] 2025-07-26 03:49:42,635 [wrapper] pilotpid: 1765871
[2025-07-25 20:49:42] 2025-07-26 03:49:42,666 [wrapper] Pilot exit status: 0
[2025-07-25 20:49:42] 2025-07-26 03:49:42,744 [wrapper] pandaids: 6745067699
[2025-07-25 20:49:42] 2025-07-26 03:49:42,799 [wrapper] cleanup supervisor_pilot 1765877 1765872
[2025-07-25 20:49:42] 2025-07-26 03:49:42,803 [wrapper] Test setup, not cleaning
[2025-07-25 20:49:42] 2025-07-26 03:49:42,805 [wrapper] apfmon messages muted
[2025-07-25 20:49:42] 2025-07-26 03:49:42,807 [wrapper] ==== wrapper stdout END ====
[2025-07-25 20:49:42] 2025-07-26 03:49:42,808 [wrapper] ==== wrapper stderr END ====
[2025-07-25 20:49:42]  *** Error codes and diagnostics ***
[2025-07-25 20:49:43]     "exeErrorCode": 65,
[2025-07-25 20:49:43]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2025-07-25 20:49:43]     "pilotErrorCode": 1305,
[2025-07-25 20:49:43]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2025-07-25 20:49:43]  *** Listing of results directory ***
[2025-07-25 20:49:43] total 229812
[2025-07-25 20:49:43] -rw-r--r--. 1 boinc boinc    530466 Jul 25 17:19 pilot3.tar.gz
[2025-07-25 20:49:43] -rw-r--r--. 1 boinc boinc      5112 Jul 25 17:40 queuedata.json
[2025-07-25 20:49:43] -rwx------. 1 boinc boinc     36292 Jul 25 17:41 runpilot2-wrapper.sh
[2025-07-25 20:49:43] -rw-r--r--. 1 boinc boinc       100 Jul 25 20:46 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-25 20:49:43] -rwxr-xr-x. 1 boinc boinc      7986 Jul 25 20:46 run_atlas
[2025-07-25 20:49:43] -rw-r--r--. 1 boinc boinc       105 Jul 25 20:46 job.xml
[2025-07-25 20:49:43] -rw-r--r--. 2 boinc boinc 231262792 Jul 25 20:46 EVNT.45743347._001662.pool.root.1
[2025-07-25 20:49:43] -rw-r--r--. 1 boinc boinc      6595 Jul 25 20:46 init_data.xml
[2025-07-25 20:49:43] -rw-r--r--. 2 boinc boinc     15095 Jul 25 20:46 start_atlas.sh
[2025-07-25 20:49:43] drwxrwx--x. 2 boinc boinc      4096 Jul 25 20:46 shared
[2025-07-25 20:49:43] -rw-r--r--. 2 boinc boinc    542907 Jul 25 20:46 input.tar.gz
[2025-07-25 20:49:43] -rw-r--r--. 1 boinc boinc         0 Jul 25 20:46 boinc_lockfile
[2025-07-25 20:49:43] -rw-r--r--. 1 boinc boinc      2563 Jul 25 20:46 pandaJob.out
[2025-07-25 20:49:43] -rw-------. 1 boinc boinc    980001 Jul 25 20:46 agis_schedconf.cvmfs.json
[2025-07-25 20:49:43] -rw-------. 1 boinc boinc   1593052 Jul 25 20:46 agis_ddmendpoints.agis.ALL.json
[2025-07-25 20:49:43] drwx------. 4 boinc boinc      4096 Jul 25 20:46 pilot3
[2025-07-25 20:49:43] -rw-r--r--. 1 boinc boinc       523 Jul 25 20:46 boinc_task_state.xml
[2025-07-25 20:49:43] -rw-------. 1 boinc boinc       985 Jul 25 20:47 memory_monitor_summary.json
[2025-07-25 20:49:43] -rw-------. 1 boinc boinc     20389 Jul 25 20:47 log.45743349._029677.job.log.tgz.1
[2025-07-25 20:49:43] -rw-------. 1 boinc boinc      8385 Jul 25 20:49 heartbeat.json
[2025-07-25 20:49:43] -rw-r--r--. 1 boinc boinc      8192 Jul 25 20:49 boinc_mmap_file
[2025-07-25 20:49:43] -rw-r--r--. 1 boinc boinc        22 Jul 25 20:49 wrapper_checkpoint.txt
[2025-07-25 20:49:43] -rw-------. 1 boinc boinc       893 Jul 25 20:49 pilotlog.txt
[2025-07-25 20:49:43] -rw-------. 1 boinc boinc        95 Jul 25 20:49 pilot_heartbeat.json
[2025-07-25 20:49:43] -rw-------. 1 boinc boinc     75601 Jul 25 20:49 log.45743349._029677.job.log.1
[2025-07-25 20:49:43] -rw-------. 1 boinc boinc       188 Jul 25 20:49 output.list
[2025-07-25 20:49:43] -rw-r--r--. 1 boinc boinc       620 Jul 25 20:49 runtime_log
[2025-07-25 20:49:43] -rw-------. 1 boinc boinc    112640 Jul 25 20:49 result.tar.gz
[2025-07-25 20:49:43] -rw-r--r--. 1 boinc boinc      8485 Jul 25 20:49 runtime_log.err
[2025-07-25 20:49:43] -rw-------. 1 boinc boinc       645 Jul 25 20:49 66ZMDm59hz7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmVtQLDmZZ59bn.diag
[2025-07-25 20:49:43] -rw-r--r--. 1 boinc boinc     21632 Jul 25 20:49 stderr.txt
[2025-07-25 20:49:43] No HITS result produced
[2025-07-25 20:49:43]  *** Contents of shared directory: ***
[2025-07-25 20:49:43] total 226508
[2025-07-25 20:49:43] -rw-r--r--. 2 boinc boinc 231262792 Jul 25 20:46 ATLAS.root_0
[2025-07-25 20:49:43] -rw-r--r--. 2 boinc boinc     15095 Jul 25 20:46 start_atlas.sh
[2025-07-25 20:49:43] -rw-r--r--. 2 boinc boinc    542907 Jul 25 20:46 input.tar.gz
[2025-07-25 20:49:43] -rw-------. 1 boinc boinc    112640 Jul 25 20:49 result.tar.gz
20:49:44 (1756845): run_atlas exited; CPU time 22.219671
20:49:44 (1756845): called boinc_finish(0)

</stderr_txt>
]]>

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