Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
23:32:13 (3516230): wrapper (7.7.26015): starting
23:32:13 (3516230): wrapper: running run_atlas (--nthreads 8)
[2025-07-25 23:32:13] Arguments: --nthreads 8
[2025-07-25 23:32:13] Threads: 8
[2025-07-25 23:32:13] Checking for CVMFS
[2025-07-25 23:32:13] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-25 23:32:13] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-25 23:32:13] Running cvmfs_config stat atlas.cern.ch
[2025-07-25 23:32:13] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-25 23:32:13] 2.13.1.0 285388 6399 85428 148763 1 188 10736871 40960000 12914 16776704 0 81926710 99.998 264646 28706 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-07-25 23:32:13] CVMFS is ok
[2025-07-25 23:32:13] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-25 23:32:13] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-25 23:32:13] Further information can be found at the LHC@home message board.
[2025-07-25 23:32:13] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-25 23:32:13] Checking for apptainer binary...
[2025-07-25 23:32:13] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-25 23:32:13] Running /usr/bin/apptainer --version
[2025-07-25 23:32:13] apptainer version 1.4.1-1.el9
[2025-07-25 23:32:13] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-25 23:32:13] c-208-36.aglt2.org
[2025-07-25 23:32:13] apptainer works
[2025-07-25 23:32:13] Set ATHENA_PROC_NUMBER=8
[2025-07-25 23:32:13] Set ATHENA_CORE_NUMBER=8
[2025-07-25 23:32:13] Starting ATLAS job with PandaID=6745062379
[2025-07-25 23:32:13] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-26 00:28:01]  *** The last 200 lines of the pilot log: ***
[2025-07-26 00:28:01]  lfn=log.45743349._027260.job.log.tgz.1
[2025-07-26 00:28:01]  mtime=0
[2025-07-26 00:28:01]  protocol_id=None
[2025-07-26 00:28:01]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-07-26 00:28:01]  replicas=None
[2025-07-26 00:28:01]  scope=mc23_13p6TeV
[2025-07-26 00:28:01]  status=None
[2025-07-26 00:28:01]  status_code=0
[2025-07-26 00:28:01]  storage_token=
[2025-07-26 00:28:01]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6745062379/log.45743349._027260.job.log.tgz.1
[2025-07-26 00:28:01]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/c1/9a/log.45743349._027260.job.log.tgz.1
[2025-07-26 00:28:01]  workdir=None
[2025-07-26 00:28:01] ]
[2025-07-26 00:28:01] 2025-07-26 04:27:24,862 | INFO     | monitor loop #245: job 0:6745062379 is in state 'stageout'
[2025-07-26 00:28:01] 2025-07-26 04:27:24,873 | WARNING  | aborting job monitor tasks since payload process 3526292 is not running
[2025-07-26 00:28:01] 2025-07-26 04:27:24,875 | INFO     | transferring file log.45743349._027260.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6745062379/log.45743349._027260.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-07-26 00:28:01] 2025-07-26 04:27:24,875 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6745062379/log.45743349._027260.job.log.tgz.1 /tmp/boinchome/slots/0/log.45743349._027260.job
[2025-07-26 00:28:01] 2025-07-26 04:27:24,888 | INFO     | adding to output.list: log.45743349._027260.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/c1/9a/log.45743349._027260.job.log.tg
[2025-07-26 00:28:01] 2025-07-26 04:27:24,888 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-26 00:28:01] 2025-07-26 04:27:24,888 | INFO     | summary of transferred files:
[2025-07-26 00:28:01] 2025-07-26 04:27:24,888 | INFO     |  -- lfn=log.45743349._027260.job.log.tgz.1, status_code=0, status=transferred
[2025-07-26 00:28:01] 2025-07-26 04:27:24,889 | INFO     | stage-out finished correctly
[2025-07-26 00:28:01] 2025-07-26 04:27:25,271 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-26 00:28:01] 2025-07-26 04:27:25,323 | INFO     | job 6745062379 has state=finished
[2025-07-26 00:28:01] 2025-07-26 04:27:25,324 | INFO     | preparing for final server update for job 6745062379 in state='finished'
[2025-07-26 00:28:01] 2025-07-26 04:27:25,324 | INFO     | this job has now completed (state=finished)
[2025-07-26 00:28:01] 2025-07-26 04:27:25,324 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-26 00:28:01] 2025-07-26 04:27:25,324 | INFO     | log transfer has been attempted: DONE
[2025-07-26 00:28:01] 2025-07-26 04:27:25,324 | INFO     | job 6745062379 has finished - writing final server update
[2025-07-26 00:28:01] 2025-07-26 04:27:25,324 | INFO     | total number of processed events: 400 (read)
[2025-07-26 00:28:01] 2025-07-26 04:27:25,325 | INFO     | executing command: lscpu
[2025-07-26 00:28:01] 2025-07-26 04:27:25,378 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-26 00:28:01] 2025-07-26 04:27:27,377 | INFO     | monitor loop #246: job 0:6745062379 is in state 'finished'
[2025-07-26 00:28:01] 2025-07-26 04:27:27,378 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-26 00:28:01] 2025-07-26 04:27:28,795 | INFO     | CPU arch script returned: x86-64-v4
[2025-07-26 00:28:01] 2025-07-26 04:27:28,801 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 3752.6359218749985
[2025-07-26 00:28:01] 2025-07-26 04:27:28,816 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6745062379/memory_monitor_summary.json (trf name=prmon)
[2025-07-26 00:28:01] 2025-07-26 04:27:28,816 | INFO     | extracted standard info from prmon json
[2025-07-26 00:28:01] 2025-07-26 04:27:28,816 | INFO     | extracted standard memory fields from prmon json
[2025-07-26 00:28:01] 2025-07-26 04:27:28,816 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-26 00:28:01] 2025-07-26 04:27:28,816 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-26 00:28:01] 2025-07-26 04:27:28,817 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-26 00:28:01] 2025-07-26 04:27:28,817 | INFO     | fitting pss+swap vs Time
[2025-07-26 00:28:01] 2025-07-26 04:27:28,818 | INFO     | sum of square deviations: 32179208.0
[2025-07-26 00:28:01] 2025-07-26 04:27:28,818 | INFO     | sum of deviations: -273544679.0
[2025-07-26 00:28:01] 2025-07-26 04:27:28,818 | INFO     | mean x: 1753502474.0
[2025-07-26 00:28:01] 2025-07-26 04:27:28,818 | INFO     | mean y: 2553643.574468085
[2025-07-26 00:28:01] 2025-07-26 04:27:28,818 | INFO     | -- intersect: 14908491396.176579
[2025-07-26 00:28:01] 2025-07-26 04:27:28,818 | INFO     | intersect: 14908491396.176579
[2025-07-26 00:28:01] 2025-07-26 04:27:28,818 | INFO     | chi2: 0.0004757812423667615
[2025-07-26 00:28:01] 2025-07-26 04:27:28,820 | INFO     | -- intersect: 14908491396.176579
[2025-07-26 00:28:01] 2025-07-26 04:27:28,820 | INFO     | current memory leak: -8.50 B/s (using 47 data points, chi2=0.00)
[2025-07-26 00:28:01] 2025-07-26 04:27:28,821 | INFO     | could have reported an average CPU frequency of 3752 MHz (5 samples)
[2025-07-26 00:28:01] 2025-07-26 04:27:28,821 | INFO     | ..............................
[2025-07-26 00:28:01] 2025-07-26 04:27:28,821 | INFO     | . Timing measurements:
[2025-07-26 00:28:01] 2025-07-26 04:27:28,821 | INFO     | . get job = 0 s
[2025-07-26 00:28:01] 2025-07-26 04:27:28,821 | INFO     | . initial setup = 2 s
[2025-07-26 00:28:01] 2025-07-26 04:27:28,821 | INFO     | . payload setup = 5 s
[2025-07-26 00:28:01] 2025-07-26 04:27:28,821 | INFO     | . stage-in = 0 s
[2025-07-26 00:28:01] 2025-07-26 04:27:28,822 | INFO     | . payload execution = 3277 s
[2025-07-26 00:28:01] 2025-07-26 04:27:28,822 | INFO     | . stage-out = 0 s
[2025-07-26 00:28:01] 2025-07-26 04:27:28,822 | INFO     | . log creation = 0 s
[2025-07-26 00:28:01] 2025-07-26 04:27:28,822 | INFO     | ..............................
[2025-07-26 00:28:01] 2025-07-26 04:27:28,878 | INFO     | 
[2025-07-26 00:28:01] 2025-07-26 04:27:28,878 | INFO     | job summary report
[2025-07-26 00:28:01] 2025-07-26 04:27:28,878 | INFO     | --------------------------------------------------
[2025-07-26 00:28:01] 2025-07-26 04:27:28,878 | INFO     | PanDA job id: 6745062379
[2025-07-26 00:28:01] 2025-07-26 04:27:28,878 | INFO     | task id: 45743349
[2025-07-26 00:28:01] 2025-07-26 04:27:28,878 | INFO     | errors: (none)
[2025-07-26 00:28:01] 2025-07-26 04:27:28,878 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-26 00:28:01] 2025-07-26 04:27:28,879 | INFO     | pilot state: finished 
[2025-07-26 00:28:01] 2025-07-26 04:27:28,879 | INFO     | transexitcode: 0
[2025-07-26 00:28:01] 2025-07-26 04:27:28,879 | INFO     | exeerrorcode: 0
[2025-07-26 00:28:01] 2025-07-26 04:27:28,879 | INFO     | exeerrordiag: 
[2025-07-26 00:28:01] 2025-07-26 04:27:28,879 | INFO     | exitcode: 0
[2025-07-26 00:28:01] 2025-07-26 04:27:28,879 | INFO     | exitmsg: OK
[2025-07-26 00:28:01] 2025-07-26 04:27:28,879 | INFO     | cpuconsumptiontime: 23879 s
[2025-07-26 00:28:01] 2025-07-26 04:27:28,879 | INFO     | nevents: 400
[2025-07-26 00:28:01] 2025-07-26 04:27:28,879 | INFO     | neventsw: 0
[2025-07-26 00:28:01] 2025-07-26 04:27:28,879 | INFO     | pid: 3526292
[2025-07-26 00:28:01] 2025-07-26 04:27:28,879 | INFO     | pgrp: 3526292
[2025-07-26 00:28:01] 2025-07-26 04:27:28,879 | INFO     | corecount: 8
[2025-07-26 00:28:01] 2025-07-26 04:27:28,879 | INFO     | event service: False
[2025-07-26 00:28:01] 2025-07-26 04:27:28,879 | INFO     | sizes: {0: 2396647, 1: 2397503, 4: 2397765, 11: 2397793, 3286: 2423345, 3288: 2432527, 3292: 2432697}
[2025-07-26 00:28:01] 2025-07-26 04:27:28,879 | INFO     | --------------------------------------------------
[2025-07-26 00:28:01] 2025-07-26 04:27:28,879 | INFO     | 
[2025-07-26 00:28:01] 2025-07-26 04:27:28,879 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-07-26 00:28:01] 2025-07-26 04:27:28,894 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-26 00:28:01] 2025-07-26 04:27:28,895 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-26 00:28:01] 2025-07-26 04:27:28,895 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-26 00:28:01] 2025-07-26 04:27:28,895 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-26 00:28:01] 2025-07-26 04:27:28,895 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-26 00:28:01] 2025-07-26 04:27:28,895 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-26 00:28:01] 2025-07-26 04:27:28,895 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-26 00:28:01] 2025-07-26 04:27:28,895 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-26 00:28:01] 2025-07-26 04:27:28,895 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-26 00:28:01] 2025-07-26 04:27:28,895 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-26 00:28:01] 2025-07-26 04:27:28,895 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-26 00:28:01] 2025-07-26 04:27:28,895 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-26 00:28:01] 2025-07-26 04:27:28,895 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-26 00:28:01] 2025-07-26 04:27:28,895 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-26 00:28:01] 2025-07-26 04:27:28,895 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-26 00:28:01] 2025-07-26 04:27:28,896 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-26 00:28:01] 2025-07-26 04:27:28,896 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-26 00:28:01] 2025-07-26 04:27:28,896 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-26 00:28:01] 2025-07-26 04:27:28,896 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-26 00:28:01] 2025-07-26 04:27:28,896 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-26 00:28:01] 2025-07-26 04:27:28,896 | INFO     | job 6745062379 has completed (purged errors)
[2025-07-26 00:28:01] 2025-07-26 04:27:28,896 | INFO     | overall cleanup function is called
[2025-07-26 00:28:01] 2025-07-26 04:27:29,197 | INFO     | PID=3519824 has CPU usage=11.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-07-26 00:28:01] 2025-07-26 04:27:29,197 | INFO     | .. there are 16 such processes running
[2025-07-26 00:28:01] 2025-07-26 04:27:29,905 | INFO     | --- collectZombieJob: --- 10, [3526292]
[2025-07-26 00:28:01] 2025-07-26 04:27:29,905 | INFO     | zombie collector waiting for pid 3526292
[2025-07-26 00:28:01] 2025-07-26 04:27:29,905 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-26 00:28:01] 2025-07-26 04:27:29,905 | INFO     | collected zombie processes
[2025-07-26 00:28:01] 2025-07-26 04:27:29,905 | INFO     | will attempt to kill all subprocesses of pid=3526292
[2025-07-26 00:28:01] 2025-07-26 04:27:30,229 | INFO     | process IDs to be killed: [3526292] (in reverse order)
[2025-07-26 00:28:01] 2025-07-26 04:27:30,338 | WARNING  | found no corresponding commands to process id(s)
[2025-07-26 00:28:01] 2025-07-26 04:27:30,339 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-26 00:28:01] 2025-07-26 04:27:30,353 | INFO     | did not find any defunct processes belonging to 3526292
[2025-07-26 00:28:01] 2025-07-26 04:27:30,365 | INFO     | did not find any defunct processes belonging to 3526292
[2025-07-26 00:28:01] 2025-07-26 04:27:30,365 | INFO     | ready for new job
[2025-07-26 00:28:01] 2025-07-26 04:27:30,365 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-26 00:28:01] 2025-07-26 04:27:30,366 | INFO     | ***************************************
[2025-07-26 00:28:01] 2025-07-26 04:27:30,366 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-26 00:28:01] 2025-07-26 04:27:30,366 | INFO     | ***************************************
[2025-07-26 00:28:01] 2025-07-26 04:27:30,366 | INFO     | 
[2025-07-26 00:28:01] 2025-07-26 04:27:30,371 | INFO     | architecture information:
[2025-07-26 00:28:01] 2025-07-26 04:27:30,371 | INFO     | executing command: cat /etc/os-release
[2025-07-26 00:28:01] 2025-07-26 04:27:30,383 | INFO     | cat /etc/os-release:
[2025-07-26 00:28:01] NAME="CentOS Linux"
[2025-07-26 00:28:01] VERSION="7 (Core)"
[2025-07-26 00:28:01] ID="centos"
[2025-07-26 00:28:01] ID_LIKE="rhel fedora"
[2025-07-26 00:28:01] VERSION_ID="7"
[2025-07-26 00:28:01] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-26 00:28:01] ANSI_COLOR="0;31"
[2025-07-26 00:28:01] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-26 00:28:01] HOME_URL="https://www.centos.org/"
[2025-07-26 00:28:01] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-26 00:28:01] 
[2025-07-26 00:28:01] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-26 00:28:01] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-26 00:28:01] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-26 00:28:01] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-26 00:28:01] 
[2025-07-26 00:28:01] 2025-07-26 04:27:30,383 | INFO     | ***************************************
[2025-07-26 00:28:01] 2025-07-26 04:27:30,885 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-07-26 00:28:01] 2025-07-26 04:27:30,902 | INFO     | sufficient remaining disk space (166053543936 B)
[2025-07-26 00:28:01] 2025-07-26 04:27:30,902 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-26 00:28:01] 2025-07-26 04:27:30,902 | INFO     | current server update state: UPDATING_FINAL
[2025-07-26 00:28:01] 2025-07-26 04:27:30,902 | INFO     | update_server=False
[2025-07-26 00:28:01] 2025-07-26 04:27:30,902 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-26 00:28:01] 2025-07-26 04:27:30,902 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-26 00:28:01] 2025-07-26 04:27:30,902 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-26 00:28:01] 2025-07-26 04:27:30,903 | INFO     | aborting loop
[2025-07-26 00:28:01] 2025-07-26 04:27:31,331 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-26 00:28:01] 2025-07-26 04:27:31,750 | INFO     | all job control threads have been joined
[2025-07-26 00:28:01] 2025-07-26 04:27:31,827 | INFO     | all data control threads have been joined
[2025-07-26 00:28:01] 2025-07-26 04:27:31,903 | INFO     | [job] retrieve thread has finished
[2025-07-26 00:28:01] 2025-07-26 04:27:31,908 | INFO     | [job] job monitor thread has finished
[2025-07-26 00:28:01] 2025-07-26 04:27:31,971 | INFO     | [job] validate thread has finished
[2025-07-26 00:28:01] 2025-07-26 04:27:32,034 | INFO     | [job] create_data_payload thread has finished
[2025-07-26 00:28:01] 2025-07-26 04:27:32,115 | INFO     | all payload control threads have been joined
[2025-07-26 00:28:01] 2025-07-26 04:27:32,117 | INFO     | [payload] validate_post thread has finished
[2025-07-26 00:28:01] 2025-07-26 04:27:32,160 | INFO     | [payload] validate_pre thread has finished
[2025-07-26 00:28:01] 2025-07-26 04:27:32,571 | INFO     | [payload] execute_payloads thread has finished
[2025-07-26 00:28:01] 2025-07-26 04:27:32,641 | INFO     | [data] copytool_in thread has finished
[2025-07-26 00:28:01] 2025-07-26 04:27:32,757 | INFO     | [job] control thread has finished
[2025-07-26 00:28:01] 2025-07-26 04:27:32,829 | INFO     | [data] control thread has finished
[2025-07-26 00:28:01] 2025-07-26 04:27:32,908 | INFO     | [data] copytool_out thread has finished
[2025-07-26 00:28:01] 2025-07-26 04:27:33,121 | INFO     | [payload] control thread has finished
[2025-07-26 00:28:01] 2025-07-26 04:27:33,213 | INFO     | [payload] failed_post thread has finished
[2025-07-26 00:28:01] 2025-07-26 04:27:33,887 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-26 00:28:01] 2025-07-26 04:27:34,892 | INFO     | [job] queue monitor thread has finished
[2025-07-26 00:28:01] 2025-07-26 04:27:35,333 | INFO     | [data] queue_monitor thread has finished
[2025-07-26 00:28:01] 2025-07-26 04:27:41,305 | INFO     | job.realtimelogging is not enabled
[2025-07-26 00:28:01] 2025-07-26 04:27:42,310 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-26 00:28:01] 2025-07-26 04:27:42,396 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140161310795584)>', '<ExcThread(monitor, started 140160687666944)>']
[2025-07-26 00:28:01] 2025-07-26 04:27:47,421 | INFO     | all workflow threads have been joined
[2025-07-26 00:28:01] 2025-07-26 04:27:47,421 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-26 00:28:01] 2025-07-26 04:27:47,421 | INFO     | traces error code: 0
[2025-07-26 00:28:01] 2025-07-26 04:27:47,421 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-26 00:28:01] 2025-07-26 04:28:01,683 | INFO     | PID=3519824 has CPU usage=2.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-26 00:28:01] 2025-07-26 04:28:01,683 | INFO     | .. there are 16 such processes running
[2025-07-26 00:28:01] 2025-07-26 04:28:01,684 | INFO     | found 0 job(s) in 20 queues
[2025-07-26 00:28:01] 2025-07-26 04:28:01,684 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-26 00:28:01] 2025-07-26 04:28:01,684 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-26 00:28:01] 2025-07-26 04:28:01,684 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-26 00:28:01] 2025-07-26 04:28:01,684 | INFO     | [monitor] control thread has ended
[2025-07-26 00:28:01] 2025-07-26 04:28:01,759 [wrapper] ==== pilot stdout END ====
[2025-07-26 00:28:01] 2025-07-26 04:28:01,763 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-26 00:28:01] 2025-07-26 04:28:01,765 [wrapper] pilotpid: 3519824
[2025-07-26 00:28:01] 2025-07-26 04:28:01,767 [wrapper] Pilot exit status: 0
[2025-07-26 00:28:01] 2025-07-26 04:28:01,776 [wrapper] pandaids: 6745062379
[2025-07-26 00:28:01] 2025-07-26 04:28:01,854 [wrapper] cleanup supervisor_pilot 3812663 3519825
[2025-07-26 00:28:01] 2025-07-26 04:28:01,856 [wrapper] Test setup, not cleaning
[2025-07-26 00:28:01] 2025-07-26 04:28:01,859 [wrapper] apfmon messages muted
[2025-07-26 00:28:01] 2025-07-26 04:28:01,861 [wrapper] ==== wrapper stdout END ====
[2025-07-26 00:28:01] 2025-07-26 04:28:01,863 [wrapper] ==== wrapper stderr END ====
[2025-07-26 00:28:01]  *** Error codes and diagnostics ***
[2025-07-26 00:28:01]     "exeErrorCode": 0,
[2025-07-26 00:28:01]     "exeErrorDiag": "",
[2025-07-26 00:28:01]     "pilotErrorCode": 0,
[2025-07-26 00:28:01]     "pilotErrorDiag": "",
[2025-07-26 00:28:01]  *** Listing of results directory ***
[2025-07-26 00:28:01] total 352416
[2025-07-26 00:28:01] -rw-r--r--. 1 boincer umatlas    530466 Jul 25 16:46 pilot3.tar.gz
[2025-07-26 00:28:01] -rw-r--r--. 1 boincer umatlas      5112 Jul 25 17:09 queuedata.json
[2025-07-26 00:28:01] -rwx------. 1 boincer umatlas     36292 Jul 25 17:10 runpilot2-wrapper.sh
[2025-07-26 00:28:01] -rw-r--r--. 1 boincer umatlas       100 Jul 25 23:32 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-26 00:28:01] -rwxr-xr-x. 1 boincer umatlas      7986 Jul 25 23:32 run_atlas
[2025-07-26 00:28:01] -rw-r--r--. 1 boincer umatlas       105 Jul 25 23:32 job.xml
[2025-07-26 00:28:01] -rw-r--r--. 2 boincer umatlas 144222904 Jul 25 23:32 EVNT.45743347._001510.pool.root.1
[2025-07-26 00:28:01] -rw-r--r--. 2 boincer umatlas     15095 Jul 25 23:32 start_atlas.sh
[2025-07-26 00:28:01] drwxrwx--x. 2 boincer umatlas      4096 Jul 25 23:32 shared
[2025-07-26 00:28:01] -rw-r--r--. 2 boincer umatlas    542895 Jul 25 23:32 input.tar.gz
[2025-07-26 00:28:01] -rw-r--r--. 1 boincer umatlas         0 Jul 25 23:32 boinc_lockfile
[2025-07-26 00:28:01] -rw-r--r--. 1 boincer umatlas      2563 Jul 25 23:32 pandaJob.out
[2025-07-26 00:28:01] -rw-------. 1 boincer umatlas    980001 Jul 25 23:32 agis_schedconf.cvmfs.json
[2025-07-26 00:28:01] -rw-------. 1 boincer umatlas   1593052 Jul 25 23:32 agis_ddmendpoints.agis.ALL.json
[2025-07-26 00:28:01] drwx------. 4 boincer umatlas      4096 Jul 25 23:32 pilot3
[2025-07-26 00:28:01] -rw-r--r--. 1 boincer umatlas      7173 Jul 26 00:21 init_data.xml
[2025-07-26 00:28:01] -rw-------. 1 boincer umatlas 211505322 Jul 26 00:27 HITS.45743349._027260.pool.root.1
[2025-07-26 00:28:01] -rw-r--r--. 1 boincer umatlas       529 Jul 26 00:27 boinc_task_state.xml
[2025-07-26 00:28:01] -rw-------. 1 boincer umatlas      1030 Jul 26 00:27 memory_monitor_summary.json
[2025-07-26 00:28:01] -rw-------. 1 boincer umatlas    291591 Jul 26 00:27 log.45743349._027260.job.log.tgz.1
[2025-07-26 00:28:01] -rw-------. 1 boincer umatlas      7768 Jul 26 00:27 heartbeat.json
[2025-07-26 00:28:01] -rw-r--r--. 1 boincer umatlas      8192 Jul 26 00:27 boinc_mmap_file
[2025-07-26 00:28:01] -rw-r--r--. 1 boincer umatlas        27 Jul 26 00:27 wrapper_checkpoint.txt
[2025-07-26 00:28:01] -rw-------. 1 boincer umatlas        95 Jul 26 00:28 pilot_heartbeat.json
[2025-07-26 00:28:01] -rw-------. 1 boincer umatlas       823 Jul 26 00:28 pilotlog.txt
[2025-07-26 00:28:01] -rw-------. 1 boincer umatlas    342301 Jul 26 00:28 log.45743349._027260.job.log.1
[2025-07-26 00:28:01] -rw-------. 1 boincer umatlas       357 Jul 26 00:28 output.list
[2025-07-26 00:28:01] -rw-r--r--. 1 boincer umatlas       620 Jul 26 00:28 runtime_log
[2025-07-26 00:28:01] -rw-------. 1 boincer umatlas    655360 Jul 26 00:28 result.tar.gz
[2025-07-26 00:28:01] -rw-r--r--. 1 boincer umatlas      8660 Jul 26 00:28 runtime_log.err
[2025-07-26 00:28:01] -rw-------. 1 boincer umatlas       651 Jul 26 00:28 oGFKDmarez7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmDUQLDmVKrNKo.diag
[2025-07-26 00:28:01] -rw-r--r--. 1 boincer umatlas     21705 Jul 26 00:28 stderr.txt
[2025-07-26 00:28:01] HITS file was successfully produced:
[2025-07-26 00:28:01] -rw-------. 1 boincer umatlas 211505322 Jul 26 00:27 shared/HITS.pool.root.1
[2025-07-26 00:28:01]  *** Contents of shared directory: ***
[2025-07-26 00:28:01] total 348588
[2025-07-26 00:28:01] -rw-r--r--. 2 boincer umatlas 144222904 Jul 25 23:32 ATLAS.root_0
[2025-07-26 00:28:01] -rw-r--r--. 2 boincer umatlas     15095 Jul 25 23:32 start_atlas.sh
[2025-07-26 00:28:01] -rw-r--r--. 2 boincer umatlas    542895 Jul 25 23:32 input.tar.gz
[2025-07-26 00:28:01] -rw-------. 1 boincer umatlas 211505322 Jul 26 00:27 HITS.pool.root.1
[2025-07-26 00:28:01] -rw-------. 1 boincer umatlas    655360 Jul 26 00:28 result.tar.gz
00:28:02 (3516230): run_atlas exited; CPU time 23955.437508
00:28:02 (3516230): called boinc_finish(0)

</stderr_txt>
]]>

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