Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
23:44:08 (2509961): wrapper (7.7.26015): starting
23:44:08 (2509961): wrapper: running run_atlas (--nthreads 8)
[2025-07-25 23:44:08] Arguments: --nthreads 8
[2025-07-25 23:44:08] Threads: 8
[2025-07-25 23:44:08] Checking for CVMFS
[2025-07-25 23:44:08] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-25 23:44:08] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-25 23:44:08] Running cvmfs_config stat atlas.cern.ch
[2025-07-25 23:44:08] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-25 23:44:08] 2.13.1.0 3153527 6407 142680 148763 3 188 21867846 40960001 12026 16776704 0 82435207 99.999 234752 57537 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-07-25 23:44:08] CVMFS is ok
[2025-07-25 23:44:08] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-25 23:44:08] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-25 23:44:08] Further information can be found at the LHC@home message board.
[2025-07-25 23:44:08] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-25 23:44:08] Checking for apptainer binary...
[2025-07-25 23:44:08] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-25 23:44:08] Running /usr/bin/apptainer --version
[2025-07-25 23:44:08] apptainer version 1.4.1-1.el9
[2025-07-25 23:44:08] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-25 23:44:08] c-208-37.aglt2.org
[2025-07-25 23:44:08] apptainer works
[2025-07-25 23:44:08] Set ATHENA_PROC_NUMBER=8
[2025-07-25 23:44:08] Set ATHENA_CORE_NUMBER=8
[2025-07-25 23:44:08] Starting ATLAS job with PandaID=6742880012
[2025-07-25 23:44:08] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-26 00:56:12]  *** The last 200 lines of the pilot log: ***
[2025-07-26 00:56:12]  lfn=log.45697472._006229.job.log.tgz.1
[2025-07-26 00:56:12]  mtime=0
[2025-07-26 00:56:12]  protocol_id=None
[2025-07-26 00:56:12]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-07-26 00:56:12]  replicas=None
[2025-07-26 00:56:12]  scope=mc23_13p6TeV
[2025-07-26 00:56:12]  status=None
[2025-07-26 00:56:12]  status_code=0
[2025-07-26 00:56:12]  storage_token=
[2025-07-26 00:56:12]  surl=/tmp/boinchome/slots/1/PanDA_Pilot-6742880012/log.45697472._006229.job.log.tgz.1
[2025-07-26 00:56:12]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/3f/09/log.45697472._006229.job.log.tgz.1
[2025-07-26 00:56:12]  workdir=None
[2025-07-26 00:56:12] ]
[2025-07-26 00:56:12] 2025-07-26 04:55:34,646 | INFO     | transferring file log.45697472._006229.job.log.tgz.1 from /tmp/boinchome/slots/1/PanDA_Pilot-6742880012/log.45697472._006229.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-07-26 00:56:12] 2025-07-26 04:55:34,646 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/1/PanDA_Pilot-6742880012/log.45697472._006229.job.log.tgz.1 /tmp/boinchome/slots/1/log.45697472._006229.job
[2025-07-26 00:56:12] 2025-07-26 04:55:34,664 | INFO     | adding to output.list: log.45697472._006229.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/3f/09/log.45697472._006229.job.log.tg
[2025-07-26 00:56:12] 2025-07-26 04:55:34,664 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-26 00:56:12] 2025-07-26 04:55:34,664 | INFO     | summary of transferred files:
[2025-07-26 00:56:12] 2025-07-26 04:55:34,664 | INFO     |  -- lfn=log.45697472._006229.job.log.tgz.1, status_code=0, status=transferred
[2025-07-26 00:56:12] 2025-07-26 04:55:34,665 | INFO     | stage-out finished correctly
[2025-07-26 00:56:12] 2025-07-26 04:55:35,036 | WARNING  | process 2529101 can no longer be monitored (due to stat problems) - aborting
[2025-07-26 00:56:12] 2025-07-26 04:55:35,036 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6742880012/memory_monitor_summary.json (trf name=prmon)
[2025-07-26 00:56:12] 2025-07-26 04:55:35,219 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-26 00:56:12] 2025-07-26 04:55:35,423 | INFO     | number of running child processes to parent process 2529101: 1
[2025-07-26 00:56:12] 2025-07-26 04:55:35,423 | INFO     | maximum number of monitored processes: 6
[2025-07-26 00:56:12] 2025-07-26 04:55:35,949 | INFO     | job 6742880012 has state=finished
[2025-07-26 00:56:12] 2025-07-26 04:55:35,949 | INFO     | preparing for final server update for job 6742880012 in state='finished'
[2025-07-26 00:56:12] 2025-07-26 04:55:35,950 | INFO     | this job has now completed (state=finished)
[2025-07-26 00:56:12] 2025-07-26 04:55:35,950 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-26 00:56:12] 2025-07-26 04:55:35,950 | INFO     | log transfer has been attempted: DONE
[2025-07-26 00:56:12] 2025-07-26 04:55:35,950 | INFO     | job 6742880012 has finished - writing final server update
[2025-07-26 00:56:12] 2025-07-26 04:55:35,950 | INFO     | total number of processed events: 400 (read)
[2025-07-26 00:56:12] 2025-07-26 04:55:35,950 | INFO     | executing command: lscpu
[2025-07-26 00:56:12] 2025-07-26 04:55:36,005 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-26 00:56:12] 2025-07-26 04:55:37,926 | INFO     | monitor loop #312: job 0:6742880012 is in state 'finished'
[2025-07-26 00:56:12] 2025-07-26 04:55:37,926 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-26 00:56:12] 2025-07-26 04:55:39,464 | INFO     | CPU arch script returned: x86-64-v4
[2025-07-26 00:56:12] 2025-07-26 04:55:39,469 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 3705.3213671875005
[2025-07-26 00:56:12] 2025-07-26 04:55:39,482 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6742880012/memory_monitor_summary.json (trf name=prmon)
[2025-07-26 00:56:12] 2025-07-26 04:55:39,482 | INFO     | extracted standard info from prmon json
[2025-07-26 00:56:12] 2025-07-26 04:55:39,482 | INFO     | extracted standard memory fields from prmon json
[2025-07-26 00:56:12] 2025-07-26 04:55:39,482 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-26 00:56:12] 2025-07-26 04:55:39,483 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-26 00:56:12] 2025-07-26 04:55:39,483 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-26 00:56:12] 2025-07-26 04:55:39,484 | INFO     | fitting pss+swap vs Time
[2025-07-26 00:56:12] 2025-07-26 04:55:39,484 | INFO     | sum of square deviations: 77515872.0
[2025-07-26 00:56:12] 2025-07-26 04:55:39,484 | INFO     | sum of deviations: -99357226.99999999
[2025-07-26 00:56:12] 2025-07-26 04:55:39,484 | INFO     | mean x: 1753503678.0
[2025-07-26 00:56:12] 2025-07-26 04:55:39,484 | INFO     | mean y: 2582857.476190476
[2025-07-26 00:56:12] 2025-07-26 04:55:39,484 | INFO     | -- intersect: 2250164655.6965714
[2025-07-26 00:56:12] 2025-07-26 04:55:39,484 | INFO     | intersect: 2250164655.6965714
[2025-07-26 00:56:12] 2025-07-26 04:55:39,484 | INFO     | chi2: 0.0007289413095096853
[2025-07-26 00:56:12] 2025-07-26 04:55:39,484 | INFO     | -- intersect: 2250164655.6965714
[2025-07-26 00:56:12] 2025-07-26 04:55:39,484 | INFO     | current memory leak: -1.28 B/s (using 63 data points, chi2=0.00)
[2025-07-26 00:56:12] 2025-07-26 04:55:39,485 | INFO     | could have reported an average CPU frequency of 3766 MHz (6 samples)
[2025-07-26 00:56:12] 2025-07-26 04:55:39,485 | INFO     | ..............................
[2025-07-26 00:56:12] 2025-07-26 04:55:39,485 | INFO     | . Timing measurements:
[2025-07-26 00:56:12] 2025-07-26 04:55:39,485 | INFO     | . get job = 0 s
[2025-07-26 00:56:12] 2025-07-26 04:55:39,485 | INFO     | . initial setup = 2 s
[2025-07-26 00:56:12] 2025-07-26 04:55:39,485 | INFO     | . payload setup = 5 s
[2025-07-26 00:56:12] 2025-07-26 04:55:39,485 | INFO     | . stage-in = 0 s
[2025-07-26 00:56:12] 2025-07-26 04:55:39,485 | INFO     | . payload execution = 4252 s
[2025-07-26 00:56:12] 2025-07-26 04:55:39,485 | INFO     | . stage-out = 0 s
[2025-07-26 00:56:12] 2025-07-26 04:55:39,485 | INFO     | . log creation = 0 s
[2025-07-26 00:56:12] 2025-07-26 04:55:39,485 | INFO     | ..............................
[2025-07-26 00:56:12] 2025-07-26 04:55:39,545 | INFO     | 
[2025-07-26 00:56:12] 2025-07-26 04:55:39,545 | INFO     | job summary report
[2025-07-26 00:56:12] 2025-07-26 04:55:39,546 | INFO     | --------------------------------------------------
[2025-07-26 00:56:12] 2025-07-26 04:55:39,546 | INFO     | PanDA job id: 6742880012
[2025-07-26 00:56:12] 2025-07-26 04:55:39,546 | INFO     | task id: 45697472
[2025-07-26 00:56:12] 2025-07-26 04:55:39,546 | INFO     | errors: (none)
[2025-07-26 00:56:12] 2025-07-26 04:55:39,546 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-26 00:56:12] 2025-07-26 04:55:39,546 | INFO     | pilot state: finished 
[2025-07-26 00:56:12] 2025-07-26 04:55:39,546 | INFO     | transexitcode: 0
[2025-07-26 00:56:12] 2025-07-26 04:55:39,546 | INFO     | exeerrorcode: 0
[2025-07-26 00:56:12] 2025-07-26 04:55:39,546 | INFO     | exeerrordiag: 
[2025-07-26 00:56:12] 2025-07-26 04:55:39,546 | INFO     | exitcode: 0
[2025-07-26 00:56:12] 2025-07-26 04:55:39,546 | INFO     | exitmsg: OK
[2025-07-26 00:56:12] 2025-07-26 04:55:39,546 | INFO     | cpuconsumptiontime: 31953 s
[2025-07-26 00:56:12] 2025-07-26 04:55:39,546 | INFO     | nevents: 400
[2025-07-26 00:56:12] 2025-07-26 04:55:39,546 | INFO     | neventsw: 0
[2025-07-26 00:56:12] 2025-07-26 04:55:39,546 | INFO     | pid: 2529101
[2025-07-26 00:56:12] 2025-07-26 04:55:39,546 | INFO     | pgrp: 2529101
[2025-07-26 00:56:12] 2025-07-26 04:55:39,546 | INFO     | corecount: 8
[2025-07-26 00:56:12] 2025-07-26 04:55:39,546 | INFO     | event service: False
[2025-07-26 00:56:12] 2025-07-26 04:55:39,546 | INFO     | sizes: {0: 2397495, 4: 2397757, 11: 2397785, 4261: 2423833, 4262: 2432887, 4267: 2433025}
[2025-07-26 00:56:12] 2025-07-26 04:55:39,546 | INFO     | --------------------------------------------------
[2025-07-26 00:56:12] 2025-07-26 04:55:39,546 | INFO     | 
[2025-07-26 00:56:12] 2025-07-26 04:55:39,546 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-07-26 00:56:12] 2025-07-26 04:55:39,563 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-26 00:56:12] 2025-07-26 04:55:39,564 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-26 00:56:12] 2025-07-26 04:55:39,564 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-26 00:56:12] 2025-07-26 04:55:39,564 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-26 00:56:12] 2025-07-26 04:55:39,564 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-26 00:56:12] 2025-07-26 04:55:39,564 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-26 00:56:12] 2025-07-26 04:55:39,564 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-26 00:56:12] 2025-07-26 04:55:39,564 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-26 00:56:12] 2025-07-26 04:55:39,564 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-26 00:56:12] 2025-07-26 04:55:39,564 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-26 00:56:12] 2025-07-26 04:55:39,564 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-26 00:56:12] 2025-07-26 04:55:39,564 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-26 00:56:12] 2025-07-26 04:55:39,564 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-26 00:56:12] 2025-07-26 04:55:39,564 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-26 00:56:12] 2025-07-26 04:55:39,564 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-26 00:56:12] 2025-07-26 04:55:39,564 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-26 00:56:12] 2025-07-26 04:55:39,564 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-26 00:56:12] 2025-07-26 04:55:39,565 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-26 00:56:12] 2025-07-26 04:55:39,565 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-26 00:56:12] 2025-07-26 04:55:39,565 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-26 00:56:12] 2025-07-26 04:55:39,565 | INFO     | job 6742880012 has completed (purged errors)
[2025-07-26 00:56:12] 2025-07-26 04:55:39,565 | INFO     | overall cleanup function is called
[2025-07-26 00:56:12] 2025-07-26 04:55:40,572 | INFO     | --- collectZombieJob: --- 10, [2529101]
[2025-07-26 00:56:12] 2025-07-26 04:55:40,573 | INFO     | zombie collector waiting for pid 2529101
[2025-07-26 00:56:12] 2025-07-26 04:55:40,573 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-26 00:56:12] 2025-07-26 04:55:40,573 | INFO     | collected zombie processes
[2025-07-26 00:56:12] 2025-07-26 04:55:40,573 | INFO     | will attempt to kill all subprocesses of pid=2529101
[2025-07-26 00:56:12] 2025-07-26 04:55:40,909 | INFO     | process IDs to be killed: [2529101] (in reverse order)
[2025-07-26 00:56:12] 2025-07-26 04:55:41,020 | WARNING  | found no corresponding commands to process id(s)
[2025-07-26 00:56:12] 2025-07-26 04:55:41,020 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-26 00:56:12] 2025-07-26 04:55:41,035 | INFO     | did not find any defunct processes belonging to 2529101
[2025-07-26 00:56:12] 2025-07-26 04:55:41,046 | INFO     | did not find any defunct processes belonging to 2529101
[2025-07-26 00:56:12] 2025-07-26 04:55:41,046 | INFO     | ready for new job
[2025-07-26 00:56:12] 2025-07-26 04:55:41,046 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-26 00:56:12] 2025-07-26 04:55:41,047 | INFO     | ***************************************
[2025-07-26 00:56:12] 2025-07-26 04:55:41,047 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-26 00:56:12] 2025-07-26 04:55:41,047 | INFO     | ***************************************
[2025-07-26 00:56:12] 2025-07-26 04:55:41,048 | INFO     | 
[2025-07-26 00:56:12] 2025-07-26 04:55:41,052 | INFO     | architecture information:
[2025-07-26 00:56:12] 2025-07-26 04:55:41,052 | INFO     | executing command: cat /etc/os-release
[2025-07-26 00:56:12] 2025-07-26 04:55:41,067 | INFO     | cat /etc/os-release:
[2025-07-26 00:56:12] NAME="CentOS Linux"
[2025-07-26 00:56:12] VERSION="7 (Core)"
[2025-07-26 00:56:12] ID="centos"
[2025-07-26 00:56:12] ID_LIKE="rhel fedora"
[2025-07-26 00:56:12] VERSION_ID="7"
[2025-07-26 00:56:12] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-26 00:56:12] ANSI_COLOR="0;31"
[2025-07-26 00:56:12] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-26 00:56:12] HOME_URL="https://www.centos.org/"
[2025-07-26 00:56:12] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-26 00:56:12] 
[2025-07-26 00:56:12] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-26 00:56:12] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-26 00:56:12] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-26 00:56:12] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-26 00:56:12] 
[2025-07-26 00:56:12] 2025-07-26 04:55:41,067 | INFO     | ***************************************
[2025-07-26 00:56:12] 2025-07-26 04:55:41,570 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-07-26 00:56:12] 2025-07-26 04:55:41,587 | INFO     | sufficient remaining disk space (164018257920 B)
[2025-07-26 00:56:12] 2025-07-26 04:55:41,587 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-26 00:56:12] 2025-07-26 04:55:41,587 | INFO     | current server update state: UPDATING_FINAL
[2025-07-26 00:56:12] 2025-07-26 04:55:41,587 | INFO     | update_server=False
[2025-07-26 00:56:12] 2025-07-26 04:55:41,587 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-26 00:56:12] 2025-07-26 04:55:41,588 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-26 00:56:12] 2025-07-26 04:55:41,588 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-26 00:56:12] 2025-07-26 04:55:41,588 | INFO     | aborting loop
[2025-07-26 00:56:12] 2025-07-26 04:55:42,040 | INFO     | all job control threads have been joined
[2025-07-26 00:56:12] 2025-07-26 04:55:42,160 | INFO     | all payload control threads have been joined
[2025-07-26 00:56:12] 2025-07-26 04:55:42,240 | INFO     | all data control threads have been joined
[2025-07-26 00:56:12] 2025-07-26 04:55:42,592 | INFO     | [job] retrieve thread has finished
[2025-07-26 00:56:12] 2025-07-26 04:55:42,593 | INFO     | [job] job monitor thread has finished
[2025-07-26 00:56:12] 2025-07-26 04:55:42,730 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-26 00:56:12] 2025-07-26 04:55:43,037 | INFO     | [data] copytool_in thread has finished
[2025-07-26 00:56:12] 2025-07-26 04:55:43,046 | INFO     | [job] control thread has finished
[2025-07-26 00:56:12] 2025-07-26 04:55:43,078 | INFO     | [payload] failed_post thread has finished
[2025-07-26 00:56:12] 2025-07-26 04:55:43,125 | INFO     | [payload] validate_post thread has finished
[2025-07-26 00:56:12] 2025-07-26 04:55:43,166 | INFO     | [payload] control thread has finished
[2025-07-26 00:56:12] 2025-07-26 04:55:43,246 | INFO     | [data] control thread has finished
[2025-07-26 00:56:12] 2025-07-26 04:55:43,311 | INFO     | [job] validate thread has finished
[2025-07-26 00:56:12] 2025-07-26 04:55:43,448 | INFO     | [payload] validate_pre thread has finished
[2025-07-26 00:56:12] 2025-07-26 04:55:43,469 | INFO     | [job] create_data_payload thread has finished
[2025-07-26 00:56:12] 2025-07-26 04:55:44,069 | INFO     | [payload] execute_payloads thread has finished
[2025-07-26 00:56:12] 2025-07-26 04:55:44,554 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-26 00:56:12] 2025-07-26 04:55:44,735 | INFO     | [data] copytool_out thread has finished
[2025-07-26 00:56:12] 2025-07-26 04:55:45,559 | INFO     | [job] queue monitor thread has finished
[2025-07-26 00:56:12] 2025-07-26 04:55:45,594 | INFO     | [data] queue_monitor thread has finished
[2025-07-26 00:56:12] 2025-07-26 04:55:52,577 | INFO     | job.realtimelogging is not enabled
[2025-07-26 00:56:12] 2025-07-26 04:55:53,578 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-26 00:56:12] 2025-07-26 04:55:54,319 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140566577645376)>', '<ExcThread(monitor, started 140565815486208)>']
[2025-07-26 00:56:12] 2025-07-26 04:55:59,320 | INFO     | all workflow threads have been joined
[2025-07-26 00:56:12] 2025-07-26 04:55:59,320 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-26 00:56:12] 2025-07-26 04:55:59,320 | INFO     | traces error code: 0
[2025-07-26 00:56:12] 2025-07-26 04:55:59,321 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-26 00:56:12] 2025-07-26 04:56:12,674 | INFO     | PID=2515692 has CPU usage=5.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-26 00:56:12] 2025-07-26 04:56:12,674 | INFO     | .. there are 15 such processes running
[2025-07-26 00:56:12] 2025-07-26 04:56:12,674 | INFO     | found 0 job(s) in 20 queues
[2025-07-26 00:56:12] 2025-07-26 04:56:12,674 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-26 00:56:12] 2025-07-26 04:56:12,674 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-26 00:56:12] 2025-07-26 04:56:12,674 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-26 00:56:12] 2025-07-26 04:56:12,674 | INFO     | [monitor] control thread has ended
[2025-07-26 00:56:12] 2025-07-26 04:56:12,751 [wrapper] ==== pilot stdout END ====
[2025-07-26 00:56:12] 2025-07-26 04:56:12,754 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-26 00:56:12] 2025-07-26 04:56:12,757 [wrapper] pilotpid: 2515692
[2025-07-26 00:56:12] 2025-07-26 04:56:12,759 [wrapper] Pilot exit status: 0
[2025-07-26 00:56:12] 2025-07-26 04:56:12,769 [wrapper] pandaids: 6742880012
[2025-07-26 00:56:12] 2025-07-26 04:56:12,845 [wrapper] cleanup supervisor_pilot 2850304 2515693
[2025-07-26 00:56:12] 2025-07-26 04:56:12,848 [wrapper] Test setup, not cleaning
[2025-07-26 00:56:12] 2025-07-26 04:56:12,850 [wrapper] apfmon messages muted
[2025-07-26 00:56:12] 2025-07-26 04:56:12,853 [wrapper] ==== wrapper stdout END ====
[2025-07-26 00:56:12] 2025-07-26 04:56:12,855 [wrapper] ==== wrapper stderr END ====
[2025-07-26 00:56:12]  *** Error codes and diagnostics ***
[2025-07-26 00:56:12]     "exeErrorCode": 0,
[2025-07-26 00:56:12]     "exeErrorDiag": "",
[2025-07-26 00:56:12]     "pilotErrorCode": 0,
[2025-07-26 00:56:12]     "pilotErrorDiag": "",
[2025-07-26 00:56:12]  *** Listing of results directory ***
[2025-07-26 00:56:12] total 603236
[2025-07-26 00:56:12] -rw-r--r--. 1 boincer umatlas    530466 Jul 23 08:58 pilot3.tar.gz
[2025-07-26 00:56:12] -rwx------. 1 boincer umatlas     36292 Jul 23 09:10 runpilot2-wrapper.sh
[2025-07-26 00:56:12] -rw-r--r--. 1 boincer umatlas      5112 Jul 23 09:10 queuedata.json
[2025-07-26 00:56:12] -rw-r--r--. 1 boincer umatlas       100 Jul 25 23:44 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-26 00:56:12] -rwxr-xr-x. 1 boincer umatlas      7986 Jul 25 23:44 run_atlas
[2025-07-26 00:56:12] -rw-r--r--. 1 boincer umatlas       105 Jul 25 23:44 job.xml
[2025-07-26 00:56:12] -rw-r--r--. 2 boincer umatlas 331025634 Jul 25 23:44 EVNT.45697470._000057.pool.root.1
[2025-07-26 00:56:12] -rw-r--r--. 2 boincer umatlas     15095 Jul 25 23:44 start_atlas.sh
[2025-07-26 00:56:12] drwxrwx--x. 2 boincer umatlas      4096 Jul 25 23:44 shared
[2025-07-26 00:56:12] -rw-r--r--. 2 boincer umatlas    542906 Jul 25 23:44 input.tar.gz
[2025-07-26 00:56:12] -rw-r--r--. 1 boincer umatlas         0 Jul 25 23:44 boinc_lockfile
[2025-07-26 00:56:12] -rw-r--r--. 1 boincer umatlas      2613 Jul 25 23:44 pandaJob.out
[2025-07-26 00:56:12] -rw-------. 1 boincer umatlas    980001 Jul 25 23:44 agis_schedconf.cvmfs.json
[2025-07-26 00:56:12] -rw-------. 1 boincer umatlas   1593052 Jul 25 23:44 agis_ddmendpoints.agis.ALL.json
[2025-07-26 00:56:12] drwx------. 4 boincer umatlas      4096 Jul 25 23:44 pilot3
[2025-07-26 00:56:12] -rw-------. 1 boincer umatlas 281356462 Jul 26 00:55 HITS.45697472._006229.pool.root.1
[2025-07-26 00:56:12] -rw-r--r--. 1 boincer umatlas       529 Jul 26 00:55 boinc_task_state.xml
[2025-07-26 00:56:12] -rw-------. 1 boincer umatlas      1030 Jul 26 00:55 memory_monitor_summary.json
[2025-07-26 00:56:12] -rw-------. 1 boincer umatlas    302560 Jul 26 00:55 log.45697472._006229.job.log.tgz.1
[2025-07-26 00:56:12] -rw-------. 1 boincer umatlas        95 Jul 26 00:55 pilot_heartbeat.json
[2025-07-26 00:56:12] -rw-------. 1 boincer umatlas      7761 Jul 26 00:55 heartbeat.json
[2025-07-26 00:56:12] -rw-r--r--. 1 boincer umatlas      7174 Jul 26 00:55 init_data.xml
[2025-07-26 00:56:12] -rw-r--r--. 1 boincer umatlas        27 Jul 26 00:56 wrapper_checkpoint.txt
[2025-07-26 00:56:12] -rw-r--r--. 1 boincer umatlas      8192 Jul 26 00:56 boinc_mmap_file
[2025-07-26 00:56:12] -rw-------. 1 boincer umatlas       823 Jul 26 00:56 pilotlog.txt
[2025-07-26 00:56:12] -rw-------. 1 boincer umatlas    425089 Jul 26 00:56 log.45697472._006229.job.log.1
[2025-07-26 00:56:12] -rw-------. 1 boincer umatlas       357 Jul 26 00:56 output.list
[2025-07-26 00:56:12] -rw-r--r--. 1 boincer umatlas       620 Jul 26 00:56 runtime_log
[2025-07-26 00:56:12] -rw-------. 1 boincer umatlas    747520 Jul 26 00:56 result.tar.gz
[2025-07-26 00:56:12] -rw-r--r--. 1 boincer umatlas      8660 Jul 26 00:56 runtime_log.err
[2025-07-26 00:56:12] -rw-------. 1 boincer umatlas       651 Jul 26 00:56 aefMDmLQoy7n9Rq4apOajLDm4fhM0noT9bVof3QYDmOHwKDm21m7Mn.diag
[2025-07-26 00:56:12] -rw-r--r--. 1 boincer umatlas     21651 Jul 26 00:56 stderr.txt
[2025-07-26 00:56:12] HITS file was successfully produced:
[2025-07-26 00:56:12] -rw-------. 1 boincer umatlas 281356462 Jul 26 00:55 shared/HITS.pool.root.1
[2025-07-26 00:56:12]  *** Contents of shared directory: ***
[2025-07-26 00:56:12] total 599320
[2025-07-26 00:56:12] -rw-r--r--. 2 boincer umatlas 331025634 Jul 25 23:44 ATLAS.root_0
[2025-07-26 00:56:12] -rw-r--r--. 2 boincer umatlas     15095 Jul 25 23:44 start_atlas.sh
[2025-07-26 00:56:12] -rw-r--r--. 2 boincer umatlas    542906 Jul 25 23:44 input.tar.gz
[2025-07-26 00:56:12] -rw-------. 1 boincer umatlas 281356462 Jul 26 00:55 HITS.pool.root.1
[2025-07-26 00:56:12] -rw-------. 1 boincer umatlas    747520 Jul 26 00:56 result.tar.gz
00:56:14 (2509961): run_atlas exited; CPU time 32060.313043
00:56:14 (2509961): called boinc_finish(0)

</stderr_txt>
]]>

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