Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
20:26:31 (4127617): wrapper (7.7.26015): starting
20:26:31 (4127617): wrapper: running run_atlas (--nthreads 8)
[2025-07-25 20:26:31] Arguments: --nthreads 8
[2025-07-25 20:26:31] Threads: 8
[2025-07-25 20:26:31] Checking for CVMFS
[2025-07-25 20:26:32] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-25 20:26:33] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-25 20:26:33] Running cvmfs_config stat atlas.cern.ch
[2025-07-25 20:26:33] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-25 20:26:33] 2.11.3.0 22717 476904 195076 148763 2 193 41835596 45568001 15070 130560 0 2514394316 99.764 1957701322 20971 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.163:3129 1
[2025-07-25 20:26:33] CVMFS is ok
[2025-07-25 20:26:33] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-25 20:26:33] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-25 20:26:33] Further information can be found at the LHC@home message board.
[2025-07-25 20:26:33] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-25 20:26:33] Checking for apptainer binary...
[2025-07-25 20:26:33] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-25 20:26:33] Running /usr/bin/apptainer --version
[2025-07-25 20:26:33] apptainer version 1.3.3-1.el9
[2025-07-25 20:26:33] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-25 20:26:34] WARNING: Environment variable TMPDIR already has value [/home/boinc/slots/0/.apptainertmp], will not forward new value [/home/boinc] from parent process environment wns0017.triumf.lcg
[2025-07-25 20:26:34] apptainer works
[2025-07-25 20:26:34] Set ATHENA_PROC_NUMBER=8
[2025-07-25 20:26:34] Set ATHENA_CORE_NUMBER=8
[2025-07-25 20:26:34] Starting ATLAS job with PandaID=6745067644
[2025-07-25 20:26:34] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-25 20:31:44]  *** The last 200 lines of the pilot log: ***
[2025-07-25 20:31:44] 2025-07-26 03:31:08,158 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-25 20:31:44] 2025-07-26 03:31:08,159 | WARNING  | wrong length of table data, x=[1753500492.0], y=[1083.0] (must be same and length>=4)
[2025-07-25 20:31:44] 2025-07-26 03:31:08,159 | INFO     | could have reported an average CPU frequency of 2095 MHz (4 samples)
[2025-07-25 20:31:44] 2025-07-26 03:31:08,159 | INFO     | ..............................
[2025-07-25 20:31:44] 2025-07-26 03:31:08,159 | INFO     | . Timing measurements:
[2025-07-25 20:31:44] 2025-07-26 03:31:08,159 | INFO     | . get job = 0 s
[2025-07-25 20:31:44] 2025-07-26 03:31:08,159 | INFO     | . initial setup = 4 s
[2025-07-25 20:31:44] 2025-07-26 03:31:08,159 | INFO     | . payload setup = 16 s
[2025-07-25 20:31:44] 2025-07-26 03:31:08,160 | INFO     | . stage-in = 0 s
[2025-07-25 20:31:44] 2025-07-26 03:31:08,160 | INFO     | . payload execution = 52 s
[2025-07-25 20:31:44] 2025-07-26 03:31:08,160 | INFO     | . stage-out = 1 s
[2025-07-25 20:31:44] 2025-07-26 03:31:08,160 | INFO     | . log creation = 0 s
[2025-07-25 20:31:44] 2025-07-26 03:31:08,160 | INFO     | ..............................
[2025-07-25 20:31:44] 2025-07-26 03:31:08,160 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-07-25 20:31:44] 2025-07-26 03:31:08,160 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6745067644/pilotlog.txt
[2025-07-25 20:31:44] 2025-07-26 03:31:08,223 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-07-25 20:31:44] - Log from pilotlog.txt -
[2025-07-25 20:31:44] 2025-07-26 03:31:08,150 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6745067644/memory_monitor_summary.json (trf name=prmon)
[2025-07-25 20:31:44] 2025-07-26 03:31:08,158 | INFO     | extracted standard info from prmon json
[2025-07-25 20:31:44] 2025-07-26 03:31:08,158 | INFO     | extracted standard memory fields from prmon json
[2025-07-25 20:31:44] 2025-07-26 03:31:08,158 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-25 20:31:44] 2025-07-26 03:31:08,158 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-25 20:31:44] 2025-07-26 03:31:08,158 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-25 20:31:44] 2025-07-26 03:31:08,159 | WARNING  | wrong length of table data, x=[1753500492.0], y=[1083.0] (must be same and length>=4)
[2025-07-25 20:31:44] 2025-07-26 03:31:08,159 | INFO     | could have reported an average CPU frequency of 2095 MHz (4 samples)
[2025-07-25 20:31:44] 2025-07-26 03:31:08,159 | INFO     | ..............................
[2025-07-25 20:31:44] 2025-07-26 03:31:08,159 | INFO     | . Timing measurements:
[2025-07-25 20:31:44] 2025-07-26 03:31:08,159 | INFO     | . get job = 0 s
[2025-07-25 20:31:44] 2025-07-26 03:31:08,159 | INFO     | . initial setup = 4 s
[2025-07-25 20:31:44] 2025-07-26 03:31:08,159 | INFO     | . payload setup = 16 s
[2025-07-25 20:31:44] 2025-07-26 03:31:08,160 | INFO     | . stage-in = 0 s
[2025-07-25 20:31:44] 2025-07-26 03:31:08,160 | INFO     | . payload execution = 52 s
[2025-07-25 20:31:44] 2025-07-26 03:31:08,160 | INFO     | . stage-out = 1 s
[2025-07-25 20:31:44] 2025-07-26 03:31:08,160 | INFO     | . log creation = 0 s
[2025-07-25 20:31:44] 2025-07-26 03:31:08,160 | INFO     | ..............................
[2025-07-25 20:31:44] 2025-07-26 03:31:08,160 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-07-25 20:31:44] 2025-07-26 03:31:08,160 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6745067644/pilotlog.txt
[2025-07-25 20:31:44] 2025-07-26 03:31:08,224 | WARNING  | 
[2025-07-25 20:31:44] [begin log extracts]
[2025-07-25 20:31:44] - Log from pilotlog.txt -
[2025-07-25 20:31:44] 2025-07-26 03:31:08,150 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6745067644/memory_monitor_summary.json (trf name=prmon)
[2025-07-25 20:31:44] 2025-07-26 03:31:08,158 | INFO     | extracted standard info from prmon json
[2025-07-25 20:31:44] 2025-07-26 03:31:08,158 | INFO     | extracted standard memory fields from prmon json
[2025-07-25 20:31:44] 2025-07-26 03:31:08,158 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-25 20:31:44] 2025-07-26 03:31:08,158 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-25 20:31:44] 2025-07-26 03:31:08,158 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-25 20:31:44] 2025-07-26 03:31:08,159 | WARNING  | wrong length of table data, x=[1753500492.0], y=[1083.0] (must be same and length>=4)
[2025-07-25 20:31:44] 2025-07-26 03:31:08,159 | INFO     | could have reported an average CPU frequency of 2095 MHz (4 samples)
[2025-07-25 20:31:44] 2025-07-26 03:31:08,159 | INFO     | ..............................
[2025-07-25 20:31:44] 2025-07-26 03:31:08,159 | INFO     | . Timing measurements:
[2025-07-25 20:31:44] 2025-07-26 03:31:08,159 | INFO     | . get job = 0 s
[2025-07-25 20:31:44] 2025-07-26 03:31:08,159 | INFO     | . initial setup = 4 s
[2025-07-25 20:31:44] 2025-07-26 03:31:08,159 | INFO     | . payload setup = 16 s
[2025-07-25 20:31:44] 2025-07-26 03:31:08,160 | INFO     | . stage-in = 0 s
[2025-07-25 20:31:44] 2025-07-26 03:31:08,160 | INFO     | . payload execution = 52 s
[2025-07-25 20:31:44] 2025-07-26 03:31:08,160 | INFO     | . stage-out = 1 s
[2025-07-25 20:31:44] 2025-07-26 03:31:08,160 | INFO     | . log creation = 0 s
[2025-07-25 20:31:44] 2025-07-26 03:31:08,160 | INFO     | ..............................
[2025-07-25 20:31:44] 2025-07-26 03:31:08,160 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-07-25 20:31:44] 2025-07-26 03:31:08,160 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6745067644/pilotlog.txt
[2025-07-25 20:31:44] [end log extracts]
[2025-07-25 20:31:44] 2025-07-26 03:31:08,224 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-07-25 20:31:44] 2025-07-26 03:31:08,225 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-07-25 20:31:44] 2025-07-26 03:31:08,597 | INFO     | 
[2025-07-25 20:31:44] 2025-07-26 03:31:08,597 | INFO     | job summary report
[2025-07-25 20:31:44] 2025-07-26 03:31:08,597 | INFO     | --------------------------------------------------
[2025-07-25 20:31:44] 2025-07-26 03:31:08,597 | INFO     | PanDA job id: 6745067644
[2025-07-25 20:31:44] 2025-07-26 03:31:08,597 | INFO     | task id: 45743349
[2025-07-25 20:31:44] 2025-07-26 03:31:08,598 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-07-25 20:28:40,880 CRITICAL Transform executor raised TransformValidationExceptio
[2025-07-25 20:31:44] 2025-07-26 03:31:08,598 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-25 20:31:44] 2025-07-26 03:31:08,598 | INFO     | pilot state: failed 
[2025-07-25 20:31:44] 2025-07-26 03:31:08,598 | INFO     | transexitcode: 65
[2025-07-25 20:31:44] 2025-07-26 03:31:08,598 | INFO     | exeerrorcode: 65
[2025-07-25 20:31:44] 2025-07-26 03:31:08,598 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2025-07-25 20:31:44] 2025-07-26 03:31:08,598 | INFO     | exitcode: 65
[2025-07-25 20:31:44] 2025-07-26 03:31:08,598 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2025-07-25 20:31:44] 2025-07-26 03:31:08,598 | INFO     | cpuconsumptiontime: 18 s
[2025-07-25 20:31:44] 2025-07-26 03:31:08,598 | INFO     | nevents: 0
[2025-07-25 20:31:44] 2025-07-26 03:31:08,598 | INFO     | neventsw: 0
[2025-07-25 20:31:44] 2025-07-26 03:31:08,598 | INFO     | pid: 4137529
[2025-07-25 20:31:44] 2025-07-26 03:31:08,598 | INFO     | pgrp: 4137529
[2025-07-25 20:31:44] 2025-07-26 03:31:08,599 | INFO     | corecount: 8
[2025-07-25 20:31:44] 2025-07-26 03:31:08,599 | INFO     | event service: False
[2025-07-25 20:31:44] 2025-07-26 03:31:08,599 | INFO     | sizes: {0: 2397250, 1: 2397449, 12: 2397449, 15: 2397739, 23: 2397767, 72: 2421018, 73: 2421122, 74: 2425442, 75: 2425470, 209: 2425636}
[2025-07-25 20:31:44] 2025-07-26 03:31:08,599 | INFO     | --------------------------------------------------
[2025-07-25 20:31:44] 2025-07-26 03:31:08,599 | INFO     | 
[2025-07-25 20:31:44] 2025-07-26 03:31:08,599 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-07-25 20:31:44] 2025-07-26 03:31:08,782 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-25 20:31:44] 2025-07-26 03:31:08,783 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-25 20:31:44] 2025-07-26 03:31:08,783 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-25 20:31:44] 2025-07-26 03:31:08,783 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-25 20:31:44] 2025-07-26 03:31:08,783 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-25 20:31:44] 2025-07-26 03:31:08,783 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-25 20:31:44] 2025-07-26 03:31:08,783 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-25 20:31:44] 2025-07-26 03:31:08,783 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-25 20:31:44] 2025-07-26 03:31:08,783 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-25 20:31:44] 2025-07-26 03:31:08,783 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-25 20:31:44] 2025-07-26 03:31:08,783 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-25 20:31:44] 2025-07-26 03:31:08,783 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-25 20:31:44] 2025-07-26 03:31:08,784 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-25 20:31:44] 2025-07-26 03:31:08,784 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-25 20:31:44] 2025-07-26 03:31:08,784 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-25 20:31:44] 2025-07-26 03:31:08,784 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-25 20:31:44] 2025-07-26 03:31:08,784 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-25 20:31:44] 2025-07-26 03:31:08,784 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-25 20:31:44] 2025-07-26 03:31:08,784 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-25 20:31:44] 2025-07-26 03:31:08,784 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-25 20:31:44] 2025-07-26 03:31:08,784 | INFO     | job 6745067644 has completed (purged errors)
[2025-07-25 20:31:44] 2025-07-26 03:31:08,784 | INFO     | overall cleanup function is called
[2025-07-25 20:31:44] 2025-07-26 03:31:09,791 | INFO     | --- collectZombieJob: --- 10, [4137529]
[2025-07-25 20:31:44] 2025-07-26 03:31:09,791 | INFO     | zombie collector waiting for pid 4137529
[2025-07-25 20:31:44] 2025-07-26 03:31:09,791 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-25 20:31:44] 2025-07-26 03:31:09,791 | INFO     | collected zombie processes
[2025-07-25 20:31:44] 2025-07-26 03:31:09,791 | INFO     | will attempt to kill all subprocesses of pid=4137529
[2025-07-25 20:31:44] 2025-07-26 03:31:10,965 | INFO     | PID=4131209 has CPU usage=3.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-25 20:31:44] 2025-07-26 03:31:10,966 | INFO     | .. there are 26 such processes running
[2025-07-25 20:31:44] 2025-07-26 03:31:11,177 | INFO     | process IDs to be killed: [4137529] (in reverse order)
[2025-07-25 20:31:44] 2025-07-26 03:31:11,786 | WARNING  | found no corresponding commands to process id(s)
[2025-07-25 20:31:44] 2025-07-26 03:31:11,786 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-25 20:31:44] 2025-07-26 03:31:11,844 | INFO     | did not find any defunct processes belonging to 4137529
[2025-07-25 20:31:44] 2025-07-26 03:31:11,933 | INFO     | did not find any defunct processes belonging to 4137529
[2025-07-25 20:31:44] 2025-07-26 03:31:11,934 | INFO     | ready for new job
[2025-07-25 20:31:44] 2025-07-26 03:31:11,934 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-25 20:31:44] 2025-07-26 03:31:11,936 | INFO     | ***************************************
[2025-07-25 20:31:44] 2025-07-26 03:31:11,936 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-25 20:31:44] 2025-07-26 03:31:11,936 | INFO     | ***************************************
[2025-07-25 20:31:44] 2025-07-26 03:31:11,936 | INFO     | 
[2025-07-25 20:31:44] 2025-07-26 03:31:12,016 | INFO     | architecture information:
[2025-07-25 20:31:44] 2025-07-26 03:31:12,028 | INFO     | executing command: cat /etc/os-release
[2025-07-25 20:31:44] 2025-07-26 03:31:12,187 | INFO     | cat /etc/os-release:
[2025-07-25 20:31:44] NAME="CentOS Linux"
[2025-07-25 20:31:44] VERSION="7 (Core)"
[2025-07-25 20:31:44] ID="centos"
[2025-07-25 20:31:44] ID_LIKE="rhel fedora"
[2025-07-25 20:31:44] VERSION_ID="7"
[2025-07-25 20:31:44] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-25 20:31:44] ANSI_COLOR="0;31"
[2025-07-25 20:31:44] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-25 20:31:44] HOME_URL="https://www.centos.org/"
[2025-07-25 20:31:44] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-25 20:31:44] 
[2025-07-25 20:31:44] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-25 20:31:44] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-25 20:31:44] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-25 20:31:44] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-25 20:31:44] 
[2025-07-25 20:31:44] 2025-07-26 03:31:12,187 | INFO     | ***************************************
[2025-07-25 20:31:44] 2025-07-26 03:31:12,691 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-07-25 20:31:44] 2025-07-26 03:31:12,757 | INFO     | sufficient remaining disk space (1201486692352 B)
[2025-07-25 20:31:44] 2025-07-26 03:31:12,757 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-25 20:31:44] 2025-07-26 03:31:12,758 | INFO     | current server update state: UPDATING_FINAL
[2025-07-25 20:31:44] 2025-07-26 03:31:12,758 | INFO     | update_server=False
[2025-07-25 20:31:44] 2025-07-26 03:31:12,758 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-25 20:31:44] 2025-07-26 03:31:12,759 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-25 20:31:44] 2025-07-26 03:31:12,763 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-25 20:31:44] 2025-07-26 03:31:12,764 | INFO     | aborting loop
[2025-07-25 20:31:44] 2025-07-26 03:31:13,016 | INFO     | all data control threads have been joined
[2025-07-25 20:31:44] 2025-07-26 03:31:13,179 | INFO     | all job control threads have been joined
[2025-07-25 20:31:44] 2025-07-26 03:31:13,453 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-25 20:31:44] 2025-07-26 03:31:13,584 | INFO     | all payload control threads have been joined
[2025-07-25 20:31:44] 2025-07-26 03:31:13,767 | INFO     | [job] retrieve thread has finished
[2025-07-25 20:31:44] 2025-07-26 03:31:13,770 | INFO     | [job] job monitor thread has finished
[2025-07-25 20:31:44] 2025-07-26 03:31:14,020 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-25 20:31:44] 2025-07-26 03:31:14,022 | INFO     | [data] control thread has finished
[2025-07-25 20:31:44] 2025-07-26 03:31:14,061 | INFO     | [payload] execute_payloads thread has finished
[2025-07-25 20:31:44] 2025-07-26 03:31:14,186 | INFO     | [job] control thread has finished
[2025-07-25 20:31:44] 2025-07-26 03:31:14,246 | INFO     | [data] copytool_in thread has finished
[2025-07-25 20:31:44] 2025-07-26 03:31:14,447 | INFO     | [payload] failed_post thread has finished
[2025-07-25 20:31:44] 2025-07-26 03:31:14,459 | INFO     | [job] queue monitor thread has finished
[2025-07-25 20:31:44] 2025-07-26 03:31:14,590 | INFO     | [payload] control thread has finished
[2025-07-25 20:31:44] 2025-07-26 03:31:14,638 | INFO     | [job] validate thread has finished
[2025-07-25 20:31:44] 2025-07-26 03:31:14,764 | INFO     | [payload] validate_post thread has finished
[2025-07-25 20:31:44] 2025-07-26 03:31:14,766 | INFO     | [data] copytool_out thread has finished
[2025-07-25 20:31:44] 2025-07-26 03:31:15,069 | INFO     | [job] create_data_payload thread has finished
[2025-07-25 20:31:44] 2025-07-26 03:31:15,146 | INFO     | [payload] validate_pre thread has finished
[2025-07-25 20:31:44] 2025-07-26 03:31:15,919 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-25 20:31:44] 2025-07-26 03:31:19,928 | INFO     | [data] queue_monitor thread has finished
[2025-07-25 20:31:44] 2025-07-26 03:31:21,922 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140013471319872)>', '<ExcThread(monitor, started 140013081704192)>']
[2025-07-25 20:31:44] 2025-07-26 03:31:26,962 | INFO     | all workflow threads have been joined
[2025-07-25 20:31:44] 2025-07-26 03:31:26,962 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-25 20:31:44] 2025-07-26 03:31:26,963 | INFO     | traces error code: 0
[2025-07-25 20:31:44] 2025-07-26 03:31:26,963 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-25 20:31:44] 2025-07-26 03:31:42,027 | INFO     | 256s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-07-25 20:31:44] 2025-07-26 03:31:43,563 | INFO     | PID=4131209 has CPU usage=1.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-25 20:31:44] 2025-07-26 03:31:43,563 | INFO     | .. there are 26 such processes running
[2025-07-25 20:31:44] 2025-07-26 03:31:43,564 | INFO     | found 0 job(s) in 20 queues
[2025-07-25 20:31:44] 2025-07-26 03:31:43,564 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-25 20:31:44] 2025-07-26 03:31:43,564 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-25 20:31:44] 2025-07-26 03:31:43,564 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-25 20:31:44] 2025-07-26 03:31:43,564 | INFO     | [monitor] control thread has ended
[2025-07-25 20:31:44] 2025-07-26 03:31:43,705 [wrapper] ==== pilot stdout END ====
[2025-07-25 20:31:44] 2025-07-26 03:31:43,763 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-25 20:31:44] 2025-07-26 03:31:43,787 [wrapper] pilotpid: 4131209
[2025-07-25 20:31:44] 2025-07-26 03:31:43,819 [wrapper] Pilot exit status: 0
[2025-07-25 20:31:44] 2025-07-26 03:31:43,943 [wrapper] pandaids: 6745067644
[2025-07-25 20:31:44] 2025-07-26 03:31:44,218 [wrapper] cleanup supervisor_pilot 4131215 4131210
[2025-07-25 20:31:44] 2025-07-26 03:31:44,229 [wrapper] Test setup, not cleaning
[2025-07-25 20:31:44] 2025-07-26 03:31:44,273 [wrapper] apfmon messages muted
[2025-07-25 20:31:44] 2025-07-26 03:31:44,299 [wrapper] ==== wrapper stdout END ====
[2025-07-25 20:31:44] 2025-07-26 03:31:44,330 [wrapper] ==== wrapper stderr END ====
[2025-07-25 20:31:44]  *** Error codes and diagnostics ***
[2025-07-25 20:31:44]     "exeErrorCode": 65,
[2025-07-25 20:31:44]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2025-07-25 20:31:44]     "pilotErrorCode": 1305,
[2025-07-25 20:31:44]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2025-07-25 20:31:44]  *** Listing of results directory ***
[2025-07-25 20:31:44] total 227536
[2025-07-25 20:31:44] -rw-r--r--. 1 boinc boinc    530466 Jul 25 17:19 pilot3.tar.gz
[2025-07-25 20:31:44] -rw-r--r--. 1 boinc boinc      5112 Jul 25 17:34 queuedata.json
[2025-07-25 20:31:44] -rwx------. 1 boinc boinc     36292 Jul 25 17:35 runpilot2-wrapper.sh
[2025-07-25 20:31:44] -rw-r--r--. 1 boinc boinc       100 Jul 25 20:26 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-25 20:31:44] -rwxr-xr-x. 1 boinc boinc      7986 Jul 25 20:26 run_atlas
[2025-07-25 20:31:44] -rw-r--r--. 1 boinc boinc       105 Jul 25 20:26 job.xml
[2025-07-25 20:31:44] -rw-r--r--. 2 boinc boinc 228918652 Jul 25 20:26 EVNT.45743347._001659.pool.root.1
[2025-07-25 20:31:44] -rw-r--r--. 1 boinc boinc      6448 Jul 25 20:26 init_data.xml
[2025-07-25 20:31:44] -rw-r--r--. 2 boinc boinc     15095 Jul 25 20:26 start_atlas.sh
[2025-07-25 20:31:44] drwxrwx--x. 2 boinc boinc      4096 Jul 25 20:26 shared
[2025-07-25 20:31:44] -rw-r--r--. 2 boinc boinc    542896 Jul 25 20:26 input.tar.gz
[2025-07-25 20:31:44] -rw-r--r--. 1 boinc boinc         0 Jul 25 20:26 boinc_lockfile
[2025-07-25 20:31:44] -rw-r--r--. 1 boinc boinc      2562 Jul 25 20:26 pandaJob.out
[2025-07-25 20:31:44] -rw-------. 1 boinc boinc    980001 Jul 25 20:26 agis_schedconf.cvmfs.json
[2025-07-25 20:31:44] -rw-------. 1 boinc boinc   1593052 Jul 25 20:26 agis_ddmendpoints.agis.ALL.json
[2025-07-25 20:31:44] drwx------. 4 boinc boinc      4096 Jul 25 20:26 pilot3
[2025-07-25 20:31:44] -rw-r--r--. 1 boinc boinc       524 Jul 25 20:28 boinc_task_state.xml
[2025-07-25 20:31:44] -rw-------. 1 boinc boinc       961 Jul 25 20:28 memory_monitor_summary.json
[2025-07-25 20:31:44] -rw-------. 1 boinc boinc     21349 Jul 25 20:28 log.45743349._029622.job.log.tgz.1
[2025-07-25 20:31:44] -rw-------. 1 boinc boinc        95 Jul 25 20:30 pilot_heartbeat.json
[2025-07-25 20:31:44] -rw-------. 1 boinc boinc      8372 Jul 25 20:31 heartbeat.json
[2025-07-25 20:31:44] -rw-r--r--. 1 boinc boinc      8192 Jul 25 20:31 boinc_mmap_file
[2025-07-25 20:31:44] -rw-r--r--. 1 boinc boinc        23 Jul 25 20:31 wrapper_checkpoint.txt
[2025-07-25 20:31:44] -rw-------. 1 boinc boinc       937 Jul 25 20:31 pilotlog.txt
[2025-07-25 20:31:44] -rw-------. 1 boinc boinc     81092 Jul 25 20:31 log.45743349._029622.job.log.1
[2025-07-25 20:31:44] -rw-------. 1 boinc boinc       188 Jul 25 20:31 output.list
[2025-07-25 20:31:44] -rw-r--r--. 1 boinc boinc       620 Jul 25 20:31 runtime_log
[2025-07-25 20:31:44] -rw-------. 1 boinc boinc    122880 Jul 25 20:31 result.tar.gz
[2025-07-25 20:31:44] -rw-r--r--. 1 boinc boinc      8648 Jul 25 20:31 runtime_log.err
[2025-07-25 20:31:44] -rw-------. 1 boinc boinc       645 Jul 25 20:31 GCTLDm43hz7n9Rq4apOajLDm4fhM0noT9bVof3QYDmapzKDmYI8EXo.diag
[2025-07-25 20:31:44] -rw-r--r--. 1 boinc boinc     22142 Jul 25 20:31 stderr.txt
[2025-07-25 20:31:44] No HITS result produced
[2025-07-25 20:31:44]  *** Contents of shared directory: ***
[2025-07-25 20:31:44] total 224224
[2025-07-25 20:31:44] -rw-r--r--. 2 boinc boinc 228918652 Jul 25 20:26 ATLAS.root_0
[2025-07-25 20:31:44] -rw-r--r--. 2 boinc boinc     15095 Jul 25 20:26 start_atlas.sh
[2025-07-25 20:31:44] -rw-r--r--. 2 boinc boinc    542896 Jul 25 20:26 input.tar.gz
[2025-07-25 20:31:44] -rw-------. 1 boinc boinc    122880 Jul 25 20:31 result.tar.gz
20:31:46 (4127617): run_atlas exited; CPU time 28.251044
20:31:46 (4127617): called boinc_finish(0)

</stderr_txt>
]]>

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