Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
23:10:38 (4096438): wrapper (7.7.26015): starting
23:10:38 (4096438): wrapper: running run_atlas (--nthreads 12)
[2025-07-25 23:10:38] Arguments: --nthreads 12
[2025-07-25 23:10:38] Threads: 12
[2025-07-25 23:10:38] Checking for CVMFS
[2025-07-25 23:10:39] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-25 23:10:40] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-25 23:10:40] Running cvmfs_config stat atlas.cern.ch
[2025-07-25 23:10:42] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-25 23:10:42] 2.12.6.0 3074763 97854 743792 148761 3 152 19488141 32935936 30363 16776704 2 191238960 99.661 221811247 7092 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-07-25 23:10:42] CVMFS is ok
[2025-07-25 23:10:42] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-25 23:10:42] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-25 23:10:42] Further information can be found at the LHC@home message board.
[2025-07-25 23:10:42] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-25 23:10:42] Checking for apptainer binary...
[2025-07-25 23:10:42] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-25 23:10:42] Running /usr/bin/apptainer --version
[2025-07-25 23:10:43] apptainer version 1.4.1-1.el9
[2025-07-25 23:10:43] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-25 23:10:44] c6-12-25-1.aglt2.org
[2025-07-25 23:10:44] apptainer works
[2025-07-25 23:10:44] Set ATHENA_PROC_NUMBER=12
[2025-07-25 23:10:44] Set ATHENA_CORE_NUMBER=12
[2025-07-25 23:10:44] Starting ATLAS job with PandaID=6745062277
[2025-07-25 23:10:44] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-26 16:20:17]  *** The last 200 lines of the pilot log: ***
[2025-07-26 16:20:17] 2025-07-26 19:27:54,009 | INFO     | fitting pss+swap vs Time
[2025-07-26 16:20:17] 2025-07-26 19:27:54,035 | INFO     | sum of square deviations: 269254661388.549
[2025-07-26 16:20:17] 2025-07-26 19:27:54,850 | INFO     | sum of deviations: 1064576350053.8053
[2025-07-26 16:20:17] 2025-07-26 19:27:54,851 | INFO     | mean x: 1753528890.2033544
[2025-07-26 16:20:17] 2025-07-26 19:27:54,852 | INFO     | mean y: 2226429.248427673
[2025-07-26 16:20:17] 2025-07-26 19:27:54,852 | INFO     | -- intersect: -6930858316.693049
[2025-07-26 16:20:17] 2025-07-26 19:27:54,852 | INFO     | intersect: -6930858316.693049
[2025-07-26 16:20:17] 2025-07-26 19:27:54,876 | INFO     | chi2: 11.35559855699026
[2025-07-26 16:20:17] 2025-07-26 19:27:54,924 | INFO     | sum of square deviations: 265044362086.75015
[2025-07-26 16:20:17] 2025-07-26 19:27:56,017 | INFO     | sum of deviations: 1231542794515.3218
[2025-07-26 16:20:17] 2025-07-26 19:27:56,091 | INFO     | mean x: 1753528737.7165437
[2025-07-26 16:20:17] 2025-07-26 19:27:56,091 | INFO     | mean y: 2232465.1833508955
[2025-07-26 16:20:17] 2025-07-26 19:27:56,092 | INFO     | -- intersect: -8145632537.142292
[2025-07-26 16:20:17] 2025-07-26 19:27:56,092 | INFO     | intersect: -8145632537.142292
[2025-07-26 16:20:17] 2025-07-26 19:27:56,193 | INFO     | chi2: 9.286170001699066
[2025-07-26 16:20:17] 2025-07-26 19:27:56,193 | INFO     | current chi2=9.286170001699066 (change=18.22386151558078 %)
[2025-07-26 16:20:17] 2025-07-26 19:27:56,193 | INFO     | right removable region: 948
[2025-07-26 16:20:17] 2025-07-26 19:27:56,354 | INFO     | sum of square deviations: 265042846964.31638
[2025-07-26 16:20:17] 2025-07-26 19:27:56,517 | INFO     | monitor loop #1627: job 0:6745062277 is in state 'finished'
[2025-07-26 16:20:17] 2025-07-26 19:27:56,517 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-26 16:20:17] 2025-07-26 19:27:56,700 | INFO     | sum of deviations: 776899242129.115
[2025-07-26 16:20:17] 2025-07-26 19:27:56,701 | INFO     | mean x: 1753529042.7175975
[2025-07-26 16:20:17] 2025-07-26 19:27:56,701 | INFO     | mean y: 2236842.963119073
[2025-07-26 16:20:17] 2025-07-26 19:27:56,702 | INFO     | -- intersect: -5137744861.663329
[2025-07-26 16:20:17] 2025-07-26 19:27:56,702 | INFO     | intersect: -5137744861.663329
[2025-07-26 16:20:17] 2025-07-26 19:27:56,707 | INFO     | chi2: 7.228856675625771
[2025-07-26 16:20:17] 2025-07-26 19:27:56,709 | INFO     | current chi2=7.228856675625771 (change=36.34103354969481 %)
[2025-07-26 16:20:17] 2025-07-26 19:27:56,712 | INFO     | sum of square deviations: 260875346582.57602
[2025-07-26 16:20:17] 2025-07-26 19:27:56,891 | INFO     | sum of deviations: 571194788614.8221
[2025-07-26 16:20:17] 2025-07-26 19:27:56,892 | INFO     | mean x: 1753529195.2288136
[2025-07-26 16:20:17] 2025-07-26 19:27:56,892 | INFO     | mean y: 2244369.153601695
[2025-07-26 16:20:17] 2025-07-26 19:27:56,892 | INFO     | -- intersect: -3837163037.9453225
[2025-07-26 16:20:17] 2025-07-26 19:27:56,892 | INFO     | intersect: -3837163037.9453225
[2025-07-26 16:20:17] 2025-07-26 19:27:56,896 | INFO     | chi2: 5.21695183930142
[2025-07-26 16:20:17] 2025-07-26 19:27:56,896 | INFO     | current chi2=5.21695183930142 (change=27.83157733792237 %)
[2025-07-26 16:20:17] 2025-07-26 19:27:56,900 | INFO     | sum of square deviations: 256751926762.02795
[2025-07-26 16:20:17] 2025-07-26 19:27:57,031 | INFO     | sum of deviations: 432858192165.28064
[2025-07-26 16:20:17] 2025-07-26 19:27:57,031 | INFO     | mean x: 1753529347.7369542
[2025-07-26 16:20:17] 2025-07-26 19:27:57,044 | INFO     | mean y: 2249486.3290734827
[2025-07-26 16:20:17] 2025-07-26 19:27:57,044 | INFO     | -- intersect: -2954026452.6386323
[2025-07-26 16:20:17] 2025-07-26 19:27:57,044 | INFO     | intersect: -2954026452.6386323
[2025-07-26 16:20:17] 2025-07-26 19:27:57,052 | INFO     | chi2: 4.337804867058912
[2025-07-26 16:20:17] 2025-07-26 19:27:57,052 | INFO     | current chi2=4.337804867058912 (change=16.8517364032295 %)
[2025-07-26 16:20:17] 2025-07-26 19:27:57,053 | INFO     | left removable region: 30
[2025-07-26 16:20:17] 2025-07-26 19:27:57,060 | INFO     | sum of square deviations: 239908962817.49026
[2025-07-26 16:20:17] 2025-07-26 19:27:57,407 | INFO     | sum of deviations: 298920019364.09845
[2025-07-26 16:20:17] 2025-07-26 19:27:57,408 | INFO     | mean x: 1753529622.2810457
[2025-07-26 16:20:17] 2025-07-26 19:27:57,408 | INFO     | mean y: 2268007.022875817
[2025-07-26 16:20:17] 2025-07-26 19:27:57,408 | INFO     | -- intersect: -2182582039.8114595
[2025-07-26 16:20:17] 2025-07-26 19:27:57,409 | INFO     | intersect: -2182582039.8114595
[2025-07-26 16:20:17] 2025-07-26 19:27:57,718 | INFO     | chi2: 0.6146304589839228
[2025-07-26 16:20:17] 2025-07-26 19:27:57,719 | INFO     | -- intersect: -2182582039.8114595
[2025-07-26 16:20:17] 2025-07-26 19:27:57,719 | INFO     | current memory leak: 1.25 B/s (using 918 data points, chi2=0.61)
[2025-07-26 16:20:17] 2025-07-26 19:27:57,920 | INFO     | could have reported an average CPU frequency of 999 MHz (35 samples)
[2025-07-26 16:20:17] 2025-07-26 19:27:57,921 | INFO     | ..............................
[2025-07-26 16:20:17] 2025-07-26 19:27:57,921 | INFO     | . Timing measurements:
[2025-07-26 16:20:17] 2025-07-26 19:27:57,922 | INFO     | . get job = 1 s
[2025-07-26 16:20:17] 2025-07-26 19:27:57,922 | INFO     | . initial setup = 11 s
[2025-07-26 16:20:17] 2025-07-26 19:27:57,922 | INFO     | . payload setup = 93 s
[2025-07-26 16:20:17] 2025-07-26 19:27:57,922 | INFO     | . stage-in = 1 s
[2025-07-26 16:20:17] 2025-07-26 19:27:57,923 | INFO     | . payload execution = 58209 s
[2025-07-26 16:20:17] 2025-07-26 19:27:57,923 | INFO     | . stage-out = 23 s
[2025-07-26 16:20:17] 2025-07-26 19:27:57,923 | INFO     | . log creation = 3 s
[2025-07-26 16:20:17] 2025-07-26 19:27:57,923 | INFO     | ..............................
[2025-07-26 16:20:17] 2025-07-26 19:27:59,667 | INFO     | 
[2025-07-26 16:20:17] 2025-07-26 19:27:59,667 | INFO     | job summary report
[2025-07-26 16:20:17] 2025-07-26 19:27:59,667 | INFO     | --------------------------------------------------
[2025-07-26 16:20:17] 2025-07-26 19:27:59,668 | INFO     | PanDA job id: 6745062277
[2025-07-26 16:20:17] 2025-07-26 19:27:59,668 | INFO     | task id: 45743349
[2025-07-26 16:20:17] 2025-07-26 19:27:59,668 | INFO     | errors: (none)
[2025-07-26 16:20:17] 2025-07-26 19:27:59,668 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-26 16:20:17] 2025-07-26 19:27:59,668 | INFO     | pilot state: finished 
[2025-07-26 16:20:17] 2025-07-26 19:27:59,669 | INFO     | transexitcode: 0
[2025-07-26 16:20:17] 2025-07-26 19:27:59,669 | INFO     | exeerrorcode: 0
[2025-07-26 16:20:17] 2025-07-26 19:27:59,669 | INFO     | exeerrordiag: 
[2025-07-26 16:20:17] 2025-07-26 19:27:59,669 | INFO     | exitcode: 0
[2025-07-26 16:20:17] 2025-07-26 19:27:59,669 | INFO     | exitmsg: OK
[2025-07-26 16:20:17] 2025-07-26 19:27:59,670 | INFO     | cpuconsumptiontime: 130577 s
[2025-07-26 16:20:17] 2025-07-26 19:27:59,670 | INFO     | nevents: 400
[2025-07-26 16:20:17] 2025-07-26 19:27:59,670 | INFO     | neventsw: 0
[2025-07-26 16:20:17] 2025-07-26 19:27:59,670 | INFO     | pid: 4158315
[2025-07-26 16:20:17] 2025-07-26 19:27:59,689 | INFO     | pgrp: 4158315
[2025-07-26 16:20:17] 2025-07-26 19:27:59,689 | INFO     | corecount: 12
[2025-07-26 16:20:17] 2025-07-26 19:27:59,689 | INFO     | event service: False
[2025-07-26 16:20:17] 2025-07-26 19:27:59,690 | INFO     | sizes: {0: 2396647, 1: 2397248, 2: 2397332, 3: 2397360, 4: 2397388, 5: 2397388, 6: 2397743, 7: 2397771, 18: 2397799, 30: 2397827, 41: 2397855, 54: 2398163, 57: 239
[2025-07-26 16:20:17] 2025-07-26 19:27:59,690 | INFO     | --------------------------------------------------
[2025-07-26 16:20:17] 2025-07-26 19:27:59,690 | INFO     | 
[2025-07-26 16:20:17] 2025-07-26 19:27:59,690 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2025-07-26 16:20:17] 2025-07-26 19:28:00,020 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-26 16:20:17] 2025-07-26 19:28:00,021 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-26 16:20:17] 2025-07-26 19:28:00,021 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-26 16:20:17] 2025-07-26 19:28:00,021 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-26 16:20:17] 2025-07-26 19:28:00,021 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-26 16:20:17] 2025-07-26 19:28:00,021 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-26 16:20:17] 2025-07-26 19:28:00,022 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-26 16:20:17] 2025-07-26 19:28:00,022 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-26 16:20:17] 2025-07-26 19:28:00,022 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-26 16:20:17] 2025-07-26 19:28:00,022 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-26 16:20:17] 2025-07-26 19:28:00,022 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-26 16:20:17] 2025-07-26 19:28:00,023 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-26 16:20:17] 2025-07-26 19:28:00,023 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-26 16:20:17] 2025-07-26 19:28:00,023 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-26 16:20:17] 2025-07-26 19:28:00,077 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-26 16:20:17] 2025-07-26 19:28:00,078 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-26 16:20:17] 2025-07-26 19:28:00,078 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-26 16:20:17] 2025-07-26 19:28:00,078 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-26 16:20:17] 2025-07-26 19:28:00,079 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-26 16:20:17] 2025-07-26 19:28:00,079 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-26 16:20:17] 2025-07-26 19:28:00,079 | INFO     | job 6745062277 has completed (purged errors)
[2025-07-26 16:20:17] 2025-07-26 19:28:00,080 | INFO     | overall cleanup function is called
[2025-07-26 16:20:17] 2025-07-26 19:28:01,192 | INFO     | --- collectZombieJob: --- 10, [4158315]
[2025-07-26 16:20:17] 2025-07-26 19:28:01,192 | INFO     | zombie collector waiting for pid 4158315
[2025-07-26 16:20:17] 2025-07-26 19:28:01,193 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-26 16:20:17] 2025-07-26 19:28:01,193 | INFO     | collected zombie processes
[2025-07-26 16:20:17] 2025-07-26 19:28:01,193 | INFO     | will attempt to kill all subprocesses of pid=4158315
[2025-07-26 16:20:17] 2025-07-26 19:28:03,669 | INFO     | PID=4111927 has CPU usage=8.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-26 16:20:17] 2025-07-26 19:28:03,670 | INFO     | .. there are 49 such processes running
[2025-07-26 16:20:17] 2025-07-26 19:28:07,262 | INFO     | process IDs to be killed: [4158315] (in reverse order)
[2025-07-26 16:20:17] 2025-07-26 19:28:08,223 | WARNING  | found no corresponding commands to process id(s)
[2025-07-26 16:20:17] 2025-07-26 19:28:08,223 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-26 16:20:17] 2025-07-26 19:28:08,484 | INFO     | did not find any defunct processes belonging to 4158315
[2025-07-26 16:20:17] 2025-07-26 19:28:08,759 | INFO     | did not find any defunct processes belonging to 4158315
[2025-07-26 16:20:17] 2025-07-26 19:28:08,760 | INFO     | ready for new job
[2025-07-26 16:20:17] 2025-07-26 19:28:08,761 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-26 16:20:17] 2025-07-26 19:28:08,782 | INFO     | ***************************************
[2025-07-26 16:20:17] 2025-07-26 19:28:08,783 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-26 16:20:17] 2025-07-26 19:28:08,783 | INFO     | ***************************************
[2025-07-26 16:20:17] 2025-07-26 19:28:08,787 | INFO     | 
[2025-07-26 16:20:17] 2025-07-26 19:28:08,892 | INFO     | architecture information:
[2025-07-26 16:20:17] 2025-07-26 19:28:08,908 | INFO     | executing command: cat /etc/os-release
[2025-07-26 16:20:17] 2025-07-26 19:28:09,091 | INFO     | cat /etc/os-release:
[2025-07-26 16:20:17] NAME="CentOS Linux"
[2025-07-26 16:20:17] VERSION="7 (Core)"
[2025-07-26 16:20:17] ID="centos"
[2025-07-26 16:20:17] ID_LIKE="rhel fedora"
[2025-07-26 16:20:17] VERSION_ID="7"
[2025-07-26 16:20:17] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-26 16:20:17] ANSI_COLOR="0;31"
[2025-07-26 16:20:17] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-26 16:20:17] HOME_URL="https://www.centos.org/"
[2025-07-26 16:20:17] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-26 16:20:17] 
[2025-07-26 16:20:17] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-26 16:20:17] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-26 16:20:17] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-26 16:20:17] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-26 16:20:17] 
[2025-07-26 16:20:17] 2025-07-26 19:28:09,092 | INFO     | ***************************************
[2025-07-26 16:20:17] 2025-07-26 19:28:09,596 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2025-07-26 16:20:17] 2025-07-26 19:28:09,843 | INFO     | sufficient remaining disk space (72251080704 B)
[2025-07-26 16:20:17] 2025-07-26 19:28:09,844 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-26 16:20:17] 2025-07-26 19:28:09,845 | INFO     | current server update state: UPDATING_FINAL
[2025-07-26 16:20:17] 2025-07-26 19:28:09,845 | INFO     | update_server=False
[2025-07-26 16:20:17] 2025-07-26 19:28:09,845 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-26 16:20:17] 2025-07-26 19:28:09,854 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-26 16:20:17] 2025-07-26 19:28:10,003 | INFO     | all data control threads have been joined
[2025-07-26 16:20:17] 2025-07-26 19:28:10,410 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-26 16:20:17] 2025-07-26 19:28:10,686 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-26 16:20:17] 2025-07-26 19:28:10,686 | INFO     | aborting loop
[2025-07-26 16:20:17] 2025-07-26 19:28:10,814 | INFO     | all job control threads have been joined
[2025-07-26 16:20:17] 2025-07-26 19:28:10,852 | INFO     | [job] retrieve thread has finished
[2025-07-26 16:20:17] 2025-07-26 19:28:11,010 | INFO     | [data] control thread has finished
[2025-07-26 16:20:17] 2025-07-26 19:28:11,159 | INFO     | [job] validate thread has finished
[2025-07-26 16:20:17] 2025-07-26 19:28:11,202 | INFO     | all payload control threads have been joined
[2025-07-26 16:20:17] 2025-07-26 19:28:11,475 | INFO     | [job] create_data_payload thread has finished
[2025-07-26 16:20:17] 2025-07-26 19:28:11,476 | INFO     | [data] copytool_in thread has finished
[2025-07-26 16:20:17] 2025-07-26 19:28:11,486 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-26 16:20:17] 2025-07-26 19:28:11,493 | INFO     | [payload] execute_payloads thread has finished
[2025-07-26 16:20:17] 2025-07-26 19:28:11,693 | INFO     | [job] job monitor thread has finished
[2025-07-26 16:20:17] 2025-07-26 19:28:11,713 | INFO     | [payload] validate_pre thread has finished
[2025-07-26 16:20:17] 2025-07-26 19:28:11,768 | INFO     | [payload] failed_post thread has finished
[2025-07-26 16:20:17] 2025-07-26 19:28:11,821 | INFO     | [job] control thread has finished
[2025-07-26 16:20:17] 2025-07-26 19:28:11,867 | INFO     | [data] copytool_out thread has finished
[2025-07-26 16:20:17] 2025-07-26 19:28:11,991 | INFO     | [payload] validate_post thread has finished
[2025-07-26 16:20:17] 2025-07-26 19:28:12,209 | INFO     | [payload] control thread has finished
[2025-07-26 16:20:17] 2025-07-26 19:28:12,798 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-26 16:20:17] 2025-07-26 19:28:13,841 | INFO     | [job] queue monitor thread has finished
[2025-07-26 16:20:17] 2025-07-26 19:28:14,420 | INFO     | [data] queue_monitor thread has finished
[2025-07-26 16:20:17] 2025-07-26 19:28:14,893 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139851498620736)>', '<ExcThread(monitor, started 139851131229952)>']
[2025-07-26 16:20:17] 2025-07-26 19:28:19,919 | INFO     | all workflow threads have been joined
[2025-07-26 16:20:17] 2025-07-26 19:28:19,920 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-26 16:20:17] 2025-07-26 19:28:19,921 | INFO     | traces error code: 0
[2025-07-26 16:20:17] 2025-07-26 19:28:19,921 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-26 16:20:17] 2025-07-26 19:28:38,950 | INFO     | PID=4111927 has CPU usage=9.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-26 16:20:17] 2025-07-26 19:28:38,950 | INFO     | .. there are 49 such processes running
[2025-07-26 16:20:17] 2025-07-26 19:28:38,951 | INFO     | found 0 job(s) in 20 queues
[2025-07-26 16:20:17] 2025-07-26 19:28:38,951 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-26 16:20:17] 2025-07-26 19:28:38,972 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-26 16:20:17] 2025-07-26 19:28:38,972 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-26 16:20:17] 2025-07-26 19:28:38,972 | INFO     | [monitor] control thread has ended
[2025-07-26 16:20:17] 2025-07-26 19:28:39,637 [wrapper] ==== pilot stdout END ====
[2025-07-26 16:20:17] 2025-07-26 19:28:39,680 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-26 16:20:17] 2025-07-26 19:28:39,723 [wrapper] pilotpid: 4111927
[2025-07-26 16:20:17] 2025-07-26 19:28:39,764 [wrapper] Pilot exit status: 0
[2025-07-26 16:20:17] 2025-07-26 19:28:39,933 [wrapper] pandaids: 6745062277
[2025-07-26 16:20:17] 2025-07-26 19:28:42,807 [wrapper] cleanup supervisor_pilot 2773810 4111928
[2025-07-26 16:20:17] 2025-07-26 19:28:42,891 [wrapper] Test setup, not cleaning
[2025-07-26 16:20:17] 2025-07-26 19:28:42,952 [wrapper] apfmon messages muted
[2025-07-26 16:20:17] 2025-07-26 19:28:42,987 [wrapper] ==== wrapper stdout END ====
[2025-07-26 16:20:17] 2025-07-26 19:28:43,023 [wrapper] ==== wrapper stderr END ====
[2025-07-26 16:20:17]  *** Error codes and diagnostics ***
[2025-07-26 16:20:17]     "exeErrorCode": 0,
[2025-07-26 16:20:17]     "exeErrorDiag": "",
[2025-07-26 16:20:17]     "pilotErrorCode": 0,
[2025-07-26 16:20:17]     "pilotErrorDiag": "",
[2025-07-26 16:20:17]  *** Listing of results directory ***
[2025-07-26 16:20:17] total 359312
[2025-07-26 16:20:17] -rw-r--r--. 1 boincer umatlas    530466 Jul 25 16:46 pilot3.tar.gz
[2025-07-26 16:20:17] -rw-r--r--. 1 boincer umatlas      5112 Jul 25 17:04 queuedata.json
[2025-07-26 16:20:17] -rwx------. 1 boincer umatlas     36292 Jul 25 17:05 runpilot2-wrapper.sh
[2025-07-26 16:20:17] -rw-r--r--. 1 boincer umatlas       100 Jul 25 23:10 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-26 16:20:17] -rwxr-xr-x. 1 boincer umatlas      7986 Jul 25 23:10 run_atlas
[2025-07-26 16:20:17] -rw-r--r--. 1 boincer umatlas       105 Jul 25 23:10 job.xml
[2025-07-26 16:20:17] -rw-r--r--. 2 boincer umatlas 147008536 Jul 25 23:10 EVNT.45743347._001503.pool.root.1
[2025-07-26 16:20:17] -rw-r--r--. 2 boincer umatlas     15095 Jul 25 23:10 start_atlas.sh
[2025-07-26 16:20:17] drwxrwx--x. 2 boincer umatlas      4096 Jul 25 23:10 shared
[2025-07-26 16:20:17] -rw-r--r--. 2 boincer umatlas    542894 Jul 25 23:10 input.tar.gz
[2025-07-26 16:20:17] -rw-r--r--. 1 boincer umatlas         0 Jul 25 23:10 boinc_lockfile
[2025-07-26 16:20:17] -rw-r--r--. 1 boincer umatlas      2563 Jul 25 23:10 pandaJob.out
[2025-07-26 16:20:17] -rw-------. 1 boincer umatlas    979977 Jul 25 23:12 agis_schedconf.cvmfs.json
[2025-07-26 16:20:17] drwx------. 4 boincer umatlas      4096 Jul 25 23:12 pilot3
[2025-07-26 16:20:17] -rw-------. 1 boincer umatlas 210024807 Jul 26 15:22 HITS.45743349._027158.pool.root.1
[2025-07-26 16:20:17] -rw-r--r--. 1 boincer umatlas       530 Jul 26 15:23 boinc_task_state.xml
[2025-07-26 16:20:17] -rw-------. 1 boincer umatlas      1043 Jul 26 15:26 memory_monitor_summary.json
[2025-07-26 16:20:17] -rw-------. 1 boincer umatlas   1593052 Jul 26 15:26 agis_ddmendpoints.agis.ALL.json
[2025-07-26 16:20:17] -rw-------. 1 boincer umatlas    722777 Jul 26 15:26 log.45743349._027158.job.log.tgz.1
[2025-07-26 16:20:17] -rw-------. 1 boincer umatlas      7841 Jul 26 15:27 heartbeat.json
[2025-07-26 16:20:17] -rw-------. 1 boincer umatlas        96 Jul 26 15:28 pilot_heartbeat.json
[2025-07-26 16:20:17] -rw-------. 1 boincer umatlas       823 Jul 26 15:28 pilotlog.txt
[2025-07-26 16:20:17] -rw-------. 1 boincer umatlas   2791453 Jul 26 15:28 log.45743349._027158.job.log.1
[2025-07-26 16:20:17] -rw-------. 1 boincer umatlas       357 Jul 26 15:28 output.list
[2025-07-26 16:20:17] -rw-r--r--. 1 boincer umatlas       620 Jul 26 15:28 runtime_log
[2025-07-26 16:20:17] -rw-------. 1 boincer umatlas   3532800 Jul 26 15:28 result.tar.gz
[2025-07-26 16:20:17] -rw-r--r--. 1 boincer umatlas      8673 Jul 26 15:28 runtime_log.err
[2025-07-26 16:20:17] -rw-------. 1 boincer umatlas       662 Jul 26 15:28 3t2KDmgmez7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm1SQLDmoB4XNo.diag
[2025-07-26 16:20:17] -rw-r--r--. 1 boincer umatlas      6856 Jul 26 16:20 init_data.xml
[2025-07-26 16:20:17] -rw-r--r--. 1 boincer umatlas      8192 Jul 26 16:20 boinc_mmap_file
[2025-07-26 16:20:17] -rw-r--r--. 1 boincer umatlas        27 Jul 26 16:20 wrapper_checkpoint.txt
[2025-07-26 16:20:17] -rw-r--r--. 1 boincer umatlas     21212 Jul 26 16:20 stderr.txt
[2025-07-26 16:20:17] HITS file was successfully produced:
[2025-07-26 16:20:17] -rw-------. 1 boincer umatlas 210024807 Jul 26 15:22 shared/HITS.pool.root.1
[2025-07-26 16:20:17]  *** Contents of shared directory: ***
[2025-07-26 16:20:17] total 352672
[2025-07-26 16:20:17] -rw-r--r--. 2 boincer umatlas 147008536 Jul 25 23:10 ATLAS.root_0
[2025-07-26 16:20:17] -rw-r--r--. 2 boincer umatlas     15095 Jul 25 23:10 start_atlas.sh
[2025-07-26 16:20:17] -rw-r--r--. 2 boincer umatlas    542894 Jul 25 23:10 input.tar.gz
[2025-07-26 16:20:17] -rw-------. 1 boincer umatlas 210024807 Jul 26 15:22 HITS.pool.root.1
[2025-07-26 16:20:17] -rw-------. 1 boincer umatlas   3532800 Jul 26 15:28 result.tar.gz
16:20:19 (4096438): run_atlas exited; CPU time 135264.773467
16:20:19 (4096438): called boinc_finish(0)

</stderr_txt>
]]>

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