Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
23:11:05 (4099505): wrapper (7.7.26015): starting
23:11:05 (4099505): wrapper: running run_atlas (--nthreads 12)
[2025-07-25 23:11:05] Arguments: --nthreads 12
[2025-07-25 23:11:05] Threads: 12
[2025-07-25 23:11:05] Checking for CVMFS
[2025-07-25 23:11:07] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-25 23:11:07] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-25 23:11:07] Running cvmfs_config stat atlas.cern.ch
[2025-07-25 23:11:09] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-25 23:11:09] 2.12.6.0 3074763 97855 743792 148761 2 152 19492642 32935936 30450 16776704 2 191244839 99.661 221811247 7092 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-07-25 23:11:09] CVMFS is ok
[2025-07-25 23:11:10] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-25 23:11:10] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-25 23:11:10] Further information can be found at the LHC@home message board.
[2025-07-25 23:11:10] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-25 23:11:10] Checking for apptainer binary...
[2025-07-25 23:11:10] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-25 23:11:10] Running /usr/bin/apptainer --version
[2025-07-25 23:11:10] apptainer version 1.4.1-1.el9
[2025-07-25 23:11:10] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-25 23:11:11] c6-12-25-1.aglt2.org
[2025-07-25 23:11:11] apptainer works
[2025-07-25 23:11:11] Set ATHENA_PROC_NUMBER=12
[2025-07-25 23:11:11] Set ATHENA_CORE_NUMBER=12
[2025-07-25 23:11:12] Starting ATLAS job with PandaID=6745062122
[2025-07-25 23:11:12] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-26 16:20:23]  *** The last 200 lines of the pilot log: ***
[2025-07-26 16:20:23] 2025-07-26 19:17:09,927 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-26 16:20:23] 2025-07-26 19:17:09,927 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-26 16:20:23] 2025-07-26 19:17:09,976 | INFO     | fitting pss+swap vs Time
[2025-07-26 16:20:23] 2025-07-26 19:17:09,980 | INFO     | sum of square deviations: 260038630618.4694
[2025-07-26 16:20:23] 2025-07-26 19:17:10,088 | INFO     | sum of deviations: 968644509090.6489
[2025-07-26 16:20:23] 2025-07-26 19:17:10,089 | INFO     | mean x: 1753528577.3011665
[2025-07-26 16:20:23] 2025-07-26 19:17:10,089 | INFO     | mean y: 2236272.318133616
[2025-07-26 16:20:23] 2025-07-26 19:17:10,089 | INFO     | -- intersect: -6529661791.813851
[2025-07-26 16:20:23] 2025-07-26 19:17:10,089 | INFO     | intersect: -6529661791.813851
[2025-07-26 16:20:23] 2025-07-26 19:17:10,093 | INFO     | chi2: 10.820212715724828
[2025-07-26 16:20:23] 2025-07-26 19:17:10,096 | INFO     | sum of square deviations: 255924951667.60083
[2025-07-26 16:20:23] 2025-07-26 19:17:10,211 | INFO     | sum of deviations: 1124164812066.8423
[2025-07-26 16:20:23] 2025-07-26 19:17:10,211 | INFO     | mean x: 1753528424.8113008
[2025-07-26 16:20:23] 2025-07-26 19:17:10,212 | INFO     | mean y: 2242024.581023454
[2025-07-26 16:20:23] 2025-07-26 19:17:10,212 | INFO     | -- intersect: -7700230670.196145
[2025-07-26 16:20:23] 2025-07-26 19:17:10,212 | INFO     | intersect: -7700230670.196145
[2025-07-26 16:20:23] 2025-07-26 19:17:10,219 | INFO     | chi2: 8.770737682714746
[2025-07-26 16:20:23] 2025-07-26 19:17:10,220 | INFO     | current chi2=8.770737682714746 (change=18.941171369317132 %)
[2025-07-26 16:20:23] 2025-07-26 19:17:10,220 | INFO     | right removable region: 937
[2025-07-26 16:20:23] 2025-07-26 19:17:10,228 | INFO     | sum of square deviations: 255923800290.97644
[2025-07-26 16:20:23] 2025-07-26 19:17:10,534 | INFO     | sum of deviations: 690799276135.2365
[2025-07-26 16:20:23] 2025-07-26 19:17:10,535 | INFO     | mean x: 1753528729.8123667
[2025-07-26 16:20:23] 2025-07-26 19:17:10,535 | INFO     | mean y: 2246566.3933901917
[2025-07-26 16:20:23] 2025-07-26 19:17:10,576 | INFO     | -- intersect: -4730945015.864595
[2025-07-26 16:20:23] 2025-07-26 19:17:10,577 | INFO     | intersect: -4730945015.864595
[2025-07-26 16:20:23] 2025-07-26 19:17:10,598 | INFO     | chi2: 6.900924686467413
[2025-07-26 16:20:23] 2025-07-26 19:17:10,598 | INFO     | current chi2=6.900924686467413 (change=36.22191293486847 %)
[2025-07-26 16:20:23] 2025-07-26 19:17:10,651 | INFO     | sum of square deviations: 251852827082.81808
[2025-07-26 16:20:23] 2025-07-26 19:17:11,080 | INFO     | sum of deviations: 497826310893.1975
[2025-07-26 16:20:23] 2025-07-26 19:17:11,081 | INFO     | mean x: 1753528882.3193998
[2025-07-26 16:20:23] 2025-07-26 19:17:11,081 | INFO     | mean y: 2253794.0664523044
[2025-07-26 16:20:23] 2025-07-26 19:17:11,081 | INFO     | -- intersect: -3463868959.6109605
[2025-07-26 16:20:23] 2025-07-26 19:17:11,081 | INFO     | intersect: -3463868959.6109605
[2025-07-26 16:20:23] 2025-07-26 19:17:11,105 | INFO     | chi2: 5.104003430874264
[2025-07-26 16:20:23] 2025-07-26 19:17:11,105 | INFO     | current chi2=5.104003430874264 (change=26.038847505710056 %)
[2025-07-26 16:20:23] 2025-07-26 19:17:11,202 | INFO     | sum of square deviations: 247825308171.71994
[2025-07-26 16:20:23] 2025-07-26 19:17:11,352 | INFO     | sum of deviations: 356801428227.11194
[2025-07-26 16:20:23] 2025-07-26 19:17:11,353 | INFO     | mean x: 1753529034.825431
[2025-07-26 16:20:23] 2025-07-26 19:17:11,353 | INFO     | mean y: 2259133.9698275863
[2025-07-26 16:20:23] 2025-07-26 19:17:11,354 | INFO     | -- intersect: -2522348496.6192865
[2025-07-26 16:20:23] 2025-07-26 19:17:11,354 | INFO     | intersect: -2522348496.6192865
[2025-07-26 16:20:23] 2025-07-26 19:17:11,357 | INFO     | chi2: 4.168972334782414
[2025-07-26 16:20:23] 2025-07-26 19:17:11,358 | INFO     | current chi2=4.168972334782414 (change=18.319562452403922 %)
[2025-07-26 16:20:23] 2025-07-26 19:17:11,358 | INFO     | left removable region: 30
[2025-07-26 16:20:23] 2025-07-26 19:17:11,361 | INFO     | sum of square deviations: 231378242457.10696
[2025-07-26 16:20:23] 2025-07-26 19:17:11,470 | INFO     | sum of deviations: 212205518709.9909
[2025-07-26 16:20:23] 2025-07-26 19:17:11,470 | INFO     | mean x: 1753529309.3605292
[2025-07-26 16:20:23] 2025-07-26 19:17:11,470 | INFO     | mean y: 2276931.7706725467
[2025-07-26 16:20:23] 2025-07-26 19:17:11,471 | INFO     | -- intersect: -1605949462.8740396
[2025-07-26 16:20:23] 2025-07-26 19:17:11,471 | INFO     | intersect: -1605949462.8740396
[2025-07-26 16:20:23] 2025-07-26 19:17:11,502 | INFO     | chi2: 0.5588323850584129
[2025-07-26 16:20:23] 2025-07-26 19:17:11,502 | INFO     | -- intersect: -1605949462.8740396
[2025-07-26 16:20:23] 2025-07-26 19:17:11,503 | INFO     | current memory leak: 0.92 B/s (using 907 data points, chi2=0.56)
[2025-07-26 16:20:23] 2025-07-26 19:17:11,517 | INFO     | could have reported an average CPU frequency of 999 MHz (34 samples)
[2025-07-26 16:20:23] 2025-07-26 19:17:11,518 | INFO     | ..............................
[2025-07-26 16:20:23] 2025-07-26 19:17:11,518 | INFO     | . Timing measurements:
[2025-07-26 16:20:23] 2025-07-26 19:17:11,518 | INFO     | . get job = 1 s
[2025-07-26 16:20:23] 2025-07-26 19:17:11,518 | INFO     | . initial setup = 8 s
[2025-07-26 16:20:23] 2025-07-26 19:17:11,518 | INFO     | . payload setup = 90 s
[2025-07-26 16:20:23] 2025-07-26 19:17:11,518 | INFO     | . stage-in = 2 s
[2025-07-26 16:20:23] 2025-07-26 19:17:11,519 | INFO     | . payload execution = 57565 s
[2025-07-26 16:20:23] 2025-07-26 19:17:11,519 | INFO     | . stage-out = 11 s
[2025-07-26 16:20:23] 2025-07-26 19:17:11,519 | INFO     | . log creation = 2 s
[2025-07-26 16:20:23] 2025-07-26 19:17:11,519 | INFO     | ..............................
[2025-07-26 16:20:23] 2025-07-26 19:17:14,573 | INFO     | 
[2025-07-26 16:20:23] 2025-07-26 19:17:14,574 | INFO     | job summary report
[2025-07-26 16:20:23] 2025-07-26 19:17:14,574 | INFO     | --------------------------------------------------
[2025-07-26 16:20:23] 2025-07-26 19:17:14,579 | INFO     | PanDA job id: 6745062122
[2025-07-26 16:20:23] 2025-07-26 19:17:14,579 | INFO     | task id: 45743349
[2025-07-26 16:20:23] 2025-07-26 19:17:14,579 | INFO     | errors: (none)
[2025-07-26 16:20:23] 2025-07-26 19:17:14,579 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-26 16:20:23] 2025-07-26 19:17:14,580 | INFO     | pilot state: finished 
[2025-07-26 16:20:23] 2025-07-26 19:17:14,580 | INFO     | transexitcode: 0
[2025-07-26 16:20:23] 2025-07-26 19:17:14,580 | INFO     | exeerrorcode: 0
[2025-07-26 16:20:23] 2025-07-26 19:17:14,580 | INFO     | exeerrordiag: 
[2025-07-26 16:20:23] 2025-07-26 19:17:14,580 | INFO     | exitcode: 0
[2025-07-26 16:20:23] 2025-07-26 19:17:14,581 | INFO     | exitmsg: OK
[2025-07-26 16:20:23] 2025-07-26 19:17:14,581 | INFO     | cpuconsumptiontime: 129389 s
[2025-07-26 16:20:23] 2025-07-26 19:17:14,581 | INFO     | nevents: 400
[2025-07-26 16:20:23] 2025-07-26 19:17:14,581 | INFO     | neventsw: 0
[2025-07-26 16:20:23] 2025-07-26 19:17:14,581 | INFO     | pid: 4162472
[2025-07-26 16:20:23] 2025-07-26 19:17:14,582 | INFO     | pgrp: 4162472
[2025-07-26 16:20:23] 2025-07-26 19:17:14,582 | INFO     | corecount: 12
[2025-07-26 16:20:23] 2025-07-26 19:17:14,582 | INFO     | event service: False
[2025-07-26 16:20:23] 2025-07-26 19:17:14,586 | INFO     | sizes: {0: 2396647, 1: 2397248, 2: 2397332, 3: 2397360, 4: 2397388, 5: 2397771, 17: 2397771, 30: 2397799, 42: 2397827, 54: 2397883, 61: 2398173, 66: 2398481, 57662
[2025-07-26 16:20:23] 2025-07-26 19:17:14,587 | INFO     | --------------------------------------------------
[2025-07-26 16:20:23] 2025-07-26 19:17:14,587 | INFO     | 
[2025-07-26 16:20:23] 2025-07-26 19:17:14,587 | INFO     | executing command: ls -lF /tmp/boinchome/slots/5
[2025-07-26 16:20:23] 2025-07-26 19:17:15,159 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-26 16:20:23] 2025-07-26 19:17:15,160 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-26 16:20:23] 2025-07-26 19:17:15,160 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-26 16:20:23] 2025-07-26 19:17:15,161 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-26 16:20:23] 2025-07-26 19:17:15,161 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-26 16:20:23] 2025-07-26 19:17:15,161 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-26 16:20:23] 2025-07-26 19:17:15,161 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-26 16:20:23] 2025-07-26 19:17:15,162 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-26 16:20:23] 2025-07-26 19:17:15,162 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-26 16:20:23] 2025-07-26 19:17:15,162 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-26 16:20:23] 2025-07-26 19:17:15,167 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-26 16:20:23] 2025-07-26 19:17:15,167 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-26 16:20:23] 2025-07-26 19:17:15,167 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-26 16:20:23] 2025-07-26 19:17:15,168 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-26 16:20:23] 2025-07-26 19:17:15,168 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-26 16:20:23] 2025-07-26 19:17:15,168 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-26 16:20:23] 2025-07-26 19:17:15,168 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-26 16:20:23] 2025-07-26 19:17:15,169 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-26 16:20:23] 2025-07-26 19:17:15,169 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-26 16:20:23] 2025-07-26 19:17:15,169 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-26 16:20:23] 2025-07-26 19:17:15,169 | INFO     | job 6745062122 has completed (purged errors)
[2025-07-26 16:20:23] 2025-07-26 19:17:15,170 | INFO     | overall cleanup function is called
[2025-07-26 16:20:23] 2025-07-26 19:17:16,235 | INFO     | --- collectZombieJob: --- 10, [4162472]
[2025-07-26 16:20:23] 2025-07-26 19:17:16,235 | INFO     | zombie collector waiting for pid 4162472
[2025-07-26 16:20:23] 2025-07-26 19:17:16,235 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-26 16:20:23] 2025-07-26 19:17:16,236 | INFO     | collected zombie processes
[2025-07-26 16:20:23] 2025-07-26 19:17:16,236 | INFO     | will attempt to kill all subprocesses of pid=4162472
[2025-07-26 16:20:23] 2025-07-26 19:17:19,906 | INFO     | PID=4116045 has CPU usage=8.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-26 16:20:23] 2025-07-26 19:17:19,906 | INFO     | .. there are 50 such processes running
[2025-07-26 16:20:23] 2025-07-26 19:17:24,236 | INFO     | process IDs to be killed: [4162472] (in reverse order)
[2025-07-26 16:20:23] 2025-07-26 19:17:25,334 | WARNING  | found no corresponding commands to process id(s)
[2025-07-26 16:20:23] 2025-07-26 19:17:25,352 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-26 16:20:23] 2025-07-26 19:17:25,477 | INFO     | did not find any defunct processes belonging to 4162472
[2025-07-26 16:20:23] 2025-07-26 19:17:25,525 | INFO     | did not find any defunct processes belonging to 4162472
[2025-07-26 16:20:23] 2025-07-26 19:17:25,526 | INFO     | ready for new job
[2025-07-26 16:20:23] 2025-07-26 19:17:25,526 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-26 16:20:23] 2025-07-26 19:17:25,532 | INFO     | ***************************************
[2025-07-26 16:20:23] 2025-07-26 19:17:25,532 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-26 16:20:23] 2025-07-26 19:17:25,533 | INFO     | ***************************************
[2025-07-26 16:20:23] 2025-07-26 19:17:25,533 | INFO     | 
[2025-07-26 16:20:23] 2025-07-26 19:17:25,600 | INFO     | architecture information:
[2025-07-26 16:20:23] 2025-07-26 19:17:25,609 | INFO     | executing command: cat /etc/os-release
[2025-07-26 16:20:23] 2025-07-26 19:17:25,834 | INFO     | cat /etc/os-release:
[2025-07-26 16:20:23] NAME="CentOS Linux"
[2025-07-26 16:20:23] VERSION="7 (Core)"
[2025-07-26 16:20:23] ID="centos"
[2025-07-26 16:20:23] ID_LIKE="rhel fedora"
[2025-07-26 16:20:23] VERSION_ID="7"
[2025-07-26 16:20:23] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-26 16:20:23] ANSI_COLOR="0;31"
[2025-07-26 16:20:23] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-26 16:20:23] HOME_URL="https://www.centos.org/"
[2025-07-26 16:20:23] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-26 16:20:23] 
[2025-07-26 16:20:23] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-26 16:20:23] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-26 16:20:23] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-26 16:20:23] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-26 16:20:23] 
[2025-07-26 16:20:23] 2025-07-26 19:17:25,835 | INFO     | ***************************************
[2025-07-26 16:20:23] 2025-07-26 19:17:26,349 | INFO     | executing command: df -mP /tmp/boinchome/slots/5
[2025-07-26 16:20:23] 2025-07-26 19:17:26,612 | INFO     | sufficient remaining disk space (71909244928 B)
[2025-07-26 16:20:23] 2025-07-26 19:17:26,612 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-26 16:20:23] 2025-07-26 19:17:26,613 | INFO     | current server update state: UPDATING_FINAL
[2025-07-26 16:20:23] 2025-07-26 19:17:26,613 | INFO     | update_server=False
[2025-07-26 16:20:23] 2025-07-26 19:17:26,623 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-26 16:20:23] 2025-07-26 19:17:26,623 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-26 16:20:23] 2025-07-26 19:17:26,624 | INFO     | aborting loop
[2025-07-26 16:20:23] 2025-07-26 19:17:26,916 | INFO     | all data control threads have been joined
[2025-07-26 16:20:23] 2025-07-26 19:17:27,243 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-26 16:20:23] 2025-07-26 19:17:27,244 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-26 16:20:23] 2025-07-26 19:17:27,267 | INFO     | all job control threads have been joined
[2025-07-26 16:20:23] 2025-07-26 19:17:27,631 | INFO     | [job] retrieve thread has finished
[2025-07-26 16:20:23] 2025-07-26 19:17:27,639 | INFO     | [job] job monitor thread has finished
[2025-07-26 16:20:23] 2025-07-26 19:17:27,751 | INFO     | [payload] validate_pre thread has finished
[2025-07-26 16:20:23] 2025-07-26 19:17:27,825 | INFO     | [payload] validate_post thread has finished
[2025-07-26 16:20:23] 2025-07-26 19:17:27,949 | INFO     | [data] control thread has finished
[2025-07-26 16:20:23] 2025-07-26 19:17:28,162 | INFO     | all payload control threads have been joined
[2025-07-26 16:20:23] 2025-07-26 19:17:28,250 | INFO     | [job] queue monitor thread has finished
[2025-07-26 16:20:23] 2025-07-26 19:17:28,256 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-26 16:20:23] 2025-07-26 19:17:28,274 | INFO     | [job] control thread has finished
[2025-07-26 16:20:23] 2025-07-26 19:17:28,677 | INFO     | [data] copytool_in thread has finished
[2025-07-26 16:20:23] 2025-07-26 19:17:28,695 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-26 16:20:23] 2025-07-26 19:17:28,715 | INFO     | [job] create_data_payload thread has finished
[2025-07-26 16:20:23] 2025-07-26 19:17:28,716 | INFO     | [payload] execute_payloads thread has finished
[2025-07-26 16:20:23] 2025-07-26 19:17:28,947 | INFO     | [job] validate thread has finished
[2025-07-26 16:20:23] 2025-07-26 19:17:29,159 | INFO     | [payload] failed_post thread has finished
[2025-07-26 16:20:23] 2025-07-26 19:17:29,168 | INFO     | [payload] control thread has finished
[2025-07-26 16:20:23] 2025-07-26 19:17:29,252 | INFO     | [data] copytool_out thread has finished
[2025-07-26 16:20:23] 2025-07-26 19:17:32,312 | INFO     | [data] queue_monitor thread has finished
[2025-07-26 16:20:23] 2025-07-26 19:17:33,731 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140128061478720)>', '<ExcThread(monitor, started 140127267452672)>']
[2025-07-26 16:20:23] 2025-07-26 19:17:38,763 | INFO     | all workflow threads have been joined
[2025-07-26 16:20:23] 2025-07-26 19:17:38,764 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-26 16:20:23] 2025-07-26 19:17:38,765 | INFO     | traces error code: 0
[2025-07-26 16:20:23] 2025-07-26 19:17:38,765 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-26 16:20:23] 2025-07-26 19:17:58,118 | INFO     | PID=4116045 has CPU usage=8.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-26 16:20:23] 2025-07-26 19:17:58,141 | INFO     | .. there are 50 such processes running
[2025-07-26 16:20:23] 2025-07-26 19:17:58,150 | INFO     | found 0 job(s) in 20 queues
[2025-07-26 16:20:23] 2025-07-26 19:17:58,150 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-26 16:20:23] 2025-07-26 19:17:58,150 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-26 16:20:23] 2025-07-26 19:17:58,151 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-26 16:20:23] 2025-07-26 19:17:58,151 | INFO     | [monitor] control thread has ended
[2025-07-26 16:20:23] 2025-07-26 19:17:59,706 [wrapper] ==== pilot stdout END ====
[2025-07-26 16:20:23] 2025-07-26 19:17:59,735 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-26 16:20:23] 2025-07-26 19:17:59,753 [wrapper] pilotpid: 4116045
[2025-07-26 16:20:23] 2025-07-26 19:17:59,795 [wrapper] Pilot exit status: 0
[2025-07-26 16:20:23] 2025-07-26 19:17:59,991 [wrapper] pandaids: 6745062122
[2025-07-26 16:20:23] 2025-07-26 19:18:01,911 [wrapper] cleanup supervisor_pilot 2712269 4116046
[2025-07-26 16:20:23] 2025-07-26 19:18:01,967 [wrapper] Test setup, not cleaning
[2025-07-26 16:20:23] 2025-07-26 19:18:02,001 [wrapper] apfmon messages muted
[2025-07-26 16:20:23] 2025-07-26 19:18:02,062 [wrapper] ==== wrapper stdout END ====
[2025-07-26 16:20:23] 2025-07-26 19:18:02,089 [wrapper] ==== wrapper stderr END ====
[2025-07-26 16:20:23]  *** Error codes and diagnostics ***
[2025-07-26 16:20:23]     "exeErrorCode": 0,
[2025-07-26 16:20:23]     "exeErrorDiag": "",
[2025-07-26 16:20:23]     "pilotErrorCode": 0,
[2025-07-26 16:20:23]     "pilotErrorDiag": "",
[2025-07-26 16:20:23]  *** Listing of results directory ***
[2025-07-26 16:20:23] total 437684
[2025-07-26 16:20:23] -rw-r--r--. 1 boincer umatlas    530466 Jul 25 16:46 pilot3.tar.gz
[2025-07-26 16:20:23] -rwx------. 1 boincer umatlas     36292 Jul 25 16:49 runpilot2-wrapper.sh
[2025-07-26 16:20:23] -rw-r--r--. 1 boincer umatlas      5112 Jul 25 16:49 queuedata.json
[2025-07-26 16:20:23] -rw-r--r--. 1 boincer umatlas       100 Jul 25 23:11 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-26 16:20:23] -rwxr-xr-x. 1 boincer umatlas      7986 Jul 25 23:11 run_atlas
[2025-07-26 16:20:23] -rw-r--r--. 1 boincer umatlas       105 Jul 25 23:11 job.xml
[2025-07-26 16:20:23] -rw-r--r--. 2 boincer umatlas 228316468 Jul 25 23:11 EVNT.45743347._001496.pool.root.1
[2025-07-26 16:20:23] -rw-r--r--. 2 boincer umatlas    542890 Jul 25 23:11 input.tar.gz
[2025-07-26 16:20:23] -rw-r--r--. 2 boincer umatlas     15095 Jul 25 23:11 start_atlas.sh
[2025-07-26 16:20:23] drwxrwx--x. 2 boincer umatlas      4096 Jul 25 23:11 shared
[2025-07-26 16:20:23] -rw-r--r--. 1 boincer umatlas         0 Jul 25 23:11 boinc_lockfile
[2025-07-26 16:20:23] -rw-r--r--. 1 boincer umatlas      2563 Jul 25 23:11 pandaJob.out
[2025-07-26 16:20:23] -rw-------. 1 boincer umatlas    979977 Jul 25 23:12 agis_schedconf.cvmfs.json
[2025-07-26 16:20:23] drwx------. 4 boincer umatlas      4096 Jul 25 23:12 pilot3
[2025-07-26 16:20:23] -rw-------. 1 boincer umatlas 208982585 Jul 26 15:11 HITS.45743349._027047.pool.root.1
[2025-07-26 16:20:23] -rw-r--r--. 1 boincer umatlas       530 Jul 26 15:12 boinc_task_state.xml
[2025-07-26 16:20:23] -rw-------. 1 boincer umatlas      1042 Jul 26 15:15 memory_monitor_summary.json
[2025-07-26 16:20:23] -rw-------. 1 boincer umatlas   1593052 Jul 26 15:16 agis_ddmendpoints.agis.ALL.json
[2025-07-26 16:20:23] -rw-------. 1 boincer umatlas    729532 Jul 26 15:16 log.45743349._027047.job.log.tgz.1
[2025-07-26 16:20:23] -rw-------. 1 boincer umatlas      7839 Jul 26 15:17 heartbeat.json
[2025-07-26 16:20:23] -rw-------. 1 boincer umatlas        96 Jul 26 15:17 pilot_heartbeat.json
[2025-07-26 16:20:23] -rw-------. 1 boincer umatlas       823 Jul 26 15:17 pilotlog.txt
[2025-07-26 16:20:23] -rw-------. 1 boincer umatlas   2773853 Jul 26 15:18 log.45743349._027047.job.log.1
[2025-07-26 16:20:23] -rw-------. 1 boincer umatlas       357 Jul 26 15:18 output.list
[2025-07-26 16:20:23] -rw-r--r--. 1 boincer umatlas       620 Jul 26 15:18 runtime_log
[2025-07-26 16:20:23] -rw-------. 1 boincer umatlas   3522560 Jul 26 15:18 result.tar.gz
[2025-07-26 16:20:23] -rw-r--r--. 1 boincer umatlas      8673 Jul 26 15:18 runtime_log.err
[2025-07-26 16:20:23] -rw-------. 1 boincer umatlas       661 Jul 26 15:18 QpGLDmhXez7n9Rq4apOajLDm4fhM0noT9bVof3QYDmeazKDmsUG1vm.diag
[2025-07-26 16:20:23] -rw-r--r--. 1 boincer umatlas      6856 Jul 26 16:20 init_data.xml
[2025-07-26 16:20:23] -rw-r--r--. 1 boincer umatlas      8192 Jul 26 16:20 boinc_mmap_file
[2025-07-26 16:20:23] -rw-r--r--. 1 boincer umatlas        27 Jul 26 16:20 wrapper_checkpoint.txt
[2025-07-26 16:20:23] -rw-r--r--. 1 boincer umatlas     21163 Jul 26 16:20 stderr.txt
[2025-07-26 16:20:23] HITS file was successfully produced:
[2025-07-26 16:20:23] -rw-------. 1 boincer umatlas 208982585 Jul 26 15:11 shared/HITS.pool.root.1
[2025-07-26 16:20:23]  *** Contents of shared directory: ***
[2025-07-26 16:20:23] total 431052
[2025-07-26 16:20:23] -rw-r--r--. 2 boincer umatlas 228316468 Jul 25 23:11 ATLAS.root_0
[2025-07-26 16:20:23] -rw-r--r--. 2 boincer umatlas    542890 Jul 25 23:11 input.tar.gz
[2025-07-26 16:20:23] -rw-r--r--. 2 boincer umatlas     15095 Jul 25 23:11 start_atlas.sh
[2025-07-26 16:20:23] -rw-------. 1 boincer umatlas 208982585 Jul 26 15:11 HITS.pool.root.1
[2025-07-26 16:20:23] -rw-------. 1 boincer umatlas   3522560 Jul 26 15:18 result.tar.gz
16:20:25 (4099505): run_atlas exited; CPU time 134102.994772
16:20:25 (4099505): called boinc_finish(0)

</stderr_txt>
]]>

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