Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
15:43:55 (25797): wrapper (7.7.26015): starting
15:43:55 (25797): wrapper: running run_atlas (--nthreads 8)
[2025-07-26 15:43:55] Arguments: --nthreads 8
[2025-07-26 15:43:55] Threads: 8
[2025-07-26 15:43:55] Checking for CVMFS
[2025-07-26 15:43:56] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-26 15:43:56] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-26 15:43:56] Running cvmfs_config stat atlas.cern.ch
[2025-07-26 15:43:57] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-26 15:43:57] 2.11.2.0 12075 108157 142620 148778 2 109 20670172 25165825 4358 130560 0 84548579 99.862 47835585 3401 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-07-26 15:43:57] CVMFS is ok
[2025-07-26 15:43:57] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-26 15:43:57] Checking for apptainer binary...
[2025-07-26 15:43:57] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-26 15:43:57] Running /usr/bin/apptainer --version
[2025-07-26 15:43:57] apptainer version 1.3.2-1.el7
[2025-07-26 15:43:57] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-26 15:43:59] cg-vwn258.simple-grid.lan
[2025-07-26 15:43:59] apptainer works
[2025-07-26 15:43:59] Set ATHENA_PROC_NUMBER=8
[2025-07-26 15:43:59] Set ATHENA_CORE_NUMBER=8
[2025-07-26 15:43:59] Starting ATLAS job with PandaID=6745066892
[2025-07-26 15:43:59] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-26 20:54:16]  *** The last 200 lines of the pilot log: ***
[2025-07-26 20:54:16] 2025-07-26 18:16:40,521 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-26 20:54:16] 2025-07-26 18:16:40,521 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-26 20:54:16] 2025-07-26 18:16:40,526 | INFO     | fitting pss+swap vs Time
[2025-07-26 20:54:16] 2025-07-26 18:16:40,527 | INFO     | sum of square deviations: 5836025702.5
[2025-07-26 20:54:16] 2025-07-26 18:16:40,530 | INFO     | sum of deviations: 14094394863.500004
[2025-07-26 20:54:16] 2025-07-26 18:16:40,530 | INFO     | mean x: 1753545596.5
[2025-07-26 20:54:16] 2025-07-26 18:16:40,530 | INFO     | mean y: 2485157.1165413535
[2025-07-26 20:54:16] 2025-07-26 18:16:40,530 | INFO     | -- intersect: -4232445480.2922907
[2025-07-26 20:54:16] 2025-07-26 18:16:40,530 | INFO     | intersect: -4232445480.2922907
[2025-07-26 20:54:16] 2025-07-26 18:16:40,531 | INFO     | chi2: 2.437986450467086
[2025-07-26 20:54:16] 2025-07-26 18:16:40,531 | INFO     | sum of square deviations: 5513070810.0
[2025-07-26 20:54:16] 2025-07-26 18:16:40,533 | INFO     | sum of deviations: 31280083738.0
[2025-07-26 20:54:16] 2025-07-26 18:16:40,534 | INFO     | mean x: 1753545444.0
[2025-07-26 20:54:16] 2025-07-26 18:16:40,534 | INFO     | mean y: 2493145.2605363983
[2025-07-26 20:54:16] 2025-07-26 18:16:40,534 | INFO     | -- intersect: -9946780175.737926
[2025-07-26 20:54:16] 2025-07-26 18:16:40,534 | INFO     | intersect: -9946780175.737926
[2025-07-26 20:54:16] 2025-07-26 18:16:40,534 | INFO     | chi2: 1.6671905161190204
[2025-07-26 20:54:16] 2025-07-26 18:16:40,534 | INFO     | current chi2=1.6671905161190204 (change=31.616087702226203 %)
[2025-07-26 20:54:16] 2025-07-26 18:16:40,535 | INFO     | sum of square deviations: 5202255680.0
[2025-07-26 20:54:16] 2025-07-26 18:16:40,543 | INFO     | sum of deviations: 30533049922.0
[2025-07-26 20:54:16] 2025-07-26 18:16:40,548 | INFO     | mean x: 1753545291.5
[2025-07-26 20:54:16] 2025-07-26 18:16:40,548 | INFO     | mean y: 2492778.625
[2025-07-26 20:54:16] 2025-07-26 18:16:40,548 | INFO     | -- intersect: -10289405432.317516
[2025-07-26 20:54:16] 2025-07-26 18:16:40,548 | INFO     | intersect: -10289405432.317516
[2025-07-26 20:54:16] 2025-07-26 18:16:40,548 | INFO     | chi2: 1.6679433225566391
[2025-07-26 20:54:16] 2025-07-26 18:16:40,549 | INFO     | current chi2=1.6679433225566391 (change=-0.04515419385729199 %)
[2025-07-26 20:54:16] 2025-07-26 18:16:40,549 | INFO     | right removable region: 255
[2025-07-26 20:54:16] 2025-07-26 18:16:40,549 | INFO     | sum of square deviations: 5513070810.0
[2025-07-26 20:54:16] 2025-07-26 18:16:40,551 | INFO     | sum of deviations: -30345270267.0
[2025-07-26 20:54:16] 2025-07-26 18:16:40,552 | INFO     | mean x: 1753545749.0
[2025-07-26 20:54:16] 2025-07-26 18:16:40,552 | INFO     | mean y: 2505984.785440613
[2025-07-26 20:54:16] 2025-07-26 18:16:40,552 | INFO     | -- intersect: 9654444353.22333
[2025-07-26 20:54:16] 2025-07-26 18:16:40,552 | INFO     | intersect: 9654444353.22333
[2025-07-26 20:54:16] 2025-07-26 18:16:40,552 | INFO     | chi2: 0.8962989672542381
[2025-07-26 20:54:16] 2025-07-26 18:16:40,552 | INFO     | current chi2=0.8962989672542381 (change=63.23609726860791 %)
[2025-07-26 20:54:16] 2025-07-26 18:16:40,553 | INFO     | sum of square deviations: 5202255680.0
[2025-07-26 20:54:16] 2025-07-26 18:16:40,555 | INFO     | sum of deviations: -29502592812.5
[2025-07-26 20:54:16] 2025-07-26 18:16:40,560 | INFO     | mean x: 1753545901.5
[2025-07-26 20:54:16] 2025-07-26 18:16:40,561 | INFO     | mean y: 2505546.51171875
[2025-07-26 20:54:16] 2025-07-26 18:16:40,561 | INFO     | -- intersect: 9947066885.331331
[2025-07-26 20:54:16] 2025-07-26 18:16:40,561 | INFO     | intersect: 9947066885.331331
[2025-07-26 20:54:16] 2025-07-26 18:16:40,561 | INFO     | chi2: 0.8826683748697984
[2025-07-26 20:54:16] 2025-07-26 18:16:40,561 | INFO     | current chi2=0.8826683748697984 (change=1.5207640399493267 %)
[2025-07-26 20:54:16] 2025-07-26 18:16:40,562 | INFO     | left removable region: 20
[2025-07-26 20:54:16] 2025-07-26 18:16:40,562 | INFO     | sum of square deviations: 4024149870.0
[2025-07-26 20:54:16] 2025-07-26 18:16:40,564 | INFO     | sum of deviations: 4940006492.999999
[2025-07-26 20:54:16] 2025-07-26 18:16:40,564 | INFO     | mean x: 1753545871.0
[2025-07-26 20:54:16] 2025-07-26 18:16:40,564 | INFO     | mean y: 2504634.4680851065
[2025-07-26 20:54:16] 2025-07-26 18:16:40,564 | INFO     | -- intersect: -2150130895.6080694
[2025-07-26 20:54:16] 2025-07-26 18:16:40,564 | INFO     | intersect: -2150130895.6080694
[2025-07-26 20:54:16] 2025-07-26 18:16:40,565 | INFO     | chi2: 0.013088821873509272
[2025-07-26 20:54:16] 2025-07-26 18:16:40,565 | INFO     | -- intersect: -2150130895.6080694
[2025-07-26 20:54:16] 2025-07-26 18:16:40,565 | INFO     | current memory leak: 1.23 B/s (using 235 data points, chi2=0.01)
[2025-07-26 20:54:16] 2025-07-26 18:16:40,566 | INFO     | could have reported an average CPU frequency of 1999 MHz (12 samples)
[2025-07-26 20:54:16] 2025-07-26 18:16:40,566 | INFO     | ..............................
[2025-07-26 20:54:16] 2025-07-26 18:16:40,566 | INFO     | . Timing measurements:
[2025-07-26 20:54:16] 2025-07-26 18:16:40,566 | INFO     | . get job = 0 s
[2025-07-26 20:54:16] 2025-07-26 18:16:40,566 | INFO     | . initial setup = 1 s
[2025-07-26 20:54:16] 2025-07-26 18:16:40,566 | INFO     | . payload setup = 13 s
[2025-07-26 20:54:16] 2025-07-26 18:16:40,567 | INFO     | . stage-in = 0 s
[2025-07-26 20:54:16] 2025-07-26 18:16:40,567 | INFO     | . payload execution = 16206 s
[2025-07-26 20:54:16] 2025-07-26 18:16:40,567 | INFO     | . stage-out = 3 s
[2025-07-26 20:54:16] 2025-07-26 18:16:40,567 | INFO     | . log creation = 1 s
[2025-07-26 20:54:16] 2025-07-26 18:16:40,567 | INFO     | ..............................
[2025-07-26 20:54:16] 2025-07-26 18:16:40,704 | INFO     | 
[2025-07-26 20:54:16] 2025-07-26 18:16:40,705 | INFO     | job summary report
[2025-07-26 20:54:16] 2025-07-26 18:16:40,705 | INFO     | --------------------------------------------------
[2025-07-26 20:54:16] 2025-07-26 18:16:40,705 | INFO     | PanDA job id: 6745066892
[2025-07-26 20:54:16] 2025-07-26 18:16:40,705 | INFO     | task id: 45743349
[2025-07-26 20:54:16] 2025-07-26 18:16:40,705 | INFO     | errors: (none)
[2025-07-26 20:54:16] 2025-07-26 18:16:40,705 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-26 20:54:16] 2025-07-26 18:16:40,705 | INFO     | pilot state: finished 
[2025-07-26 20:54:16] 2025-07-26 18:16:40,705 | INFO     | transexitcode: 0
[2025-07-26 20:54:16] 2025-07-26 18:16:40,705 | INFO     | exeerrorcode: 0
[2025-07-26 20:54:16] 2025-07-26 18:16:40,706 | INFO     | exeerrordiag: 
[2025-07-26 20:54:16] 2025-07-26 18:16:40,706 | INFO     | exitcode: 0
[2025-07-26 20:54:16] 2025-07-26 18:16:40,706 | INFO     | exitmsg: OK
[2025-07-26 20:54:16] 2025-07-26 18:16:40,706 | INFO     | cpuconsumptiontime: 62887 s
[2025-07-26 20:54:16] 2025-07-26 18:16:40,706 | INFO     | nevents: 400
[2025-07-26 20:54:16] 2025-07-26 18:16:40,706 | INFO     | neventsw: 0
[2025-07-26 20:54:16] 2025-07-26 18:16:40,706 | INFO     | pid: 4000
[2025-07-26 20:54:16] 2025-07-26 18:16:40,706 | INFO     | pgrp: 4000
[2025-07-26 20:54:16] 2025-07-26 18:16:40,706 | INFO     | corecount: 8
[2025-07-26 20:54:16] 2025-07-26 18:16:40,707 | INFO     | event service: False
[2025-07-26 20:54:16] 2025-07-26 18:16:40,707 | INFO     | sizes: {0: 2397475, 1: 2397503, 10: 2397765, 12: 2397793, 16224: 2428845, 16229: 2438055, 16319: 2438193}
[2025-07-26 20:54:16] 2025-07-26 18:16:40,707 | INFO     | --------------------------------------------------
[2025-07-26 20:54:16] 2025-07-26 18:16:40,707 | INFO     | 
[2025-07-26 20:54:16] 2025-07-26 18:16:40,707 | INFO     | executing command: ls -lF /var/lib/boinc/slots/5
[2025-07-26 20:54:16] 2025-07-26 18:16:41,047 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-26 20:54:16] 2025-07-26 18:16:41,047 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-26 20:54:16] 2025-07-26 18:16:41,047 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-26 20:54:16] 2025-07-26 18:16:41,047 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-26 20:54:16] 2025-07-26 18:16:41,048 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-26 20:54:16] 2025-07-26 18:16:41,048 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-26 20:54:16] 2025-07-26 18:16:41,048 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-26 20:54:16] 2025-07-26 18:16:41,048 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-26 20:54:16] 2025-07-26 18:16:41,048 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-26 20:54:16] 2025-07-26 18:16:41,048 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-26 20:54:16] 2025-07-26 18:16:41,048 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-26 20:54:16] 2025-07-26 18:16:41,048 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-26 20:54:16] 2025-07-26 18:16:41,049 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-26 20:54:16] 2025-07-26 18:16:41,049 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-26 20:54:16] 2025-07-26 18:16:41,049 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-26 20:54:16] 2025-07-26 18:16:41,049 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-26 20:54:16] 2025-07-26 18:16:41,049 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-26 20:54:16] 2025-07-26 18:16:41,049 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-26 20:54:16] 2025-07-26 18:16:41,049 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-26 20:54:16] 2025-07-26 18:16:41,049 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-26 20:54:16] 2025-07-26 18:16:41,050 | INFO     | job 6745066892 has completed (purged errors)
[2025-07-26 20:54:16] 2025-07-26 18:16:41,050 | INFO     | overall cleanup function is called
[2025-07-26 20:54:16] 2025-07-26 18:16:42,059 | INFO     | --- collectZombieJob: --- 10, [4000]
[2025-07-26 20:54:16] 2025-07-26 18:16:42,060 | INFO     | zombie collector waiting for pid 4000
[2025-07-26 20:54:16] 2025-07-26 18:16:42,060 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-26 20:54:16] 2025-07-26 18:16:42,060 | INFO     | collected zombie processes
[2025-07-26 20:54:16] 2025-07-26 18:16:42,060 | INFO     | will attempt to kill all subprocesses of pid=4000
[2025-07-26 20:54:16] 2025-07-26 18:16:42,169 | INFO     | process IDs to be killed: [4000] (in reverse order)
[2025-07-26 20:54:16] 2025-07-26 18:16:42,663 | WARNING  | found no corresponding commands to process id(s)
[2025-07-26 20:54:16] 2025-07-26 18:16:42,663 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-26 20:54:16] 2025-07-26 18:16:42,667 | INFO     | did not find any defunct processes belonging to 4000
[2025-07-26 20:54:16] 2025-07-26 18:16:42,670 | INFO     | did not find any defunct processes belonging to 4000
[2025-07-26 20:54:16] 2025-07-26 18:16:42,670 | INFO     | ready for new job
[2025-07-26 20:54:16] 2025-07-26 18:16:42,670 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-26 20:54:16] 2025-07-26 18:16:42,672 | INFO     | ***************************************
[2025-07-26 20:54:16] 2025-07-26 18:16:42,672 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-26 20:54:16] 2025-07-26 18:16:42,672 | INFO     | ***************************************
[2025-07-26 20:54:16] 2025-07-26 18:16:42,672 | INFO     | 
[2025-07-26 20:54:16] 2025-07-26 18:16:42,673 | INFO     | pilot is running in a VM
[2025-07-26 20:54:16] 2025-07-26 18:16:42,673 | INFO     | architecture information:
[2025-07-26 20:54:16] 2025-07-26 18:16:42,681 | INFO     | executing command: cat /etc/os-release
[2025-07-26 20:54:16] 2025-07-26 18:16:42,918 | INFO     | cat /etc/os-release:
[2025-07-26 20:54:16] NAME="CentOS Linux"
[2025-07-26 20:54:16] VERSION="7 (Core)"
[2025-07-26 20:54:16] ID="centos"
[2025-07-26 20:54:16] ID_LIKE="rhel fedora"
[2025-07-26 20:54:16] VERSION_ID="7"
[2025-07-26 20:54:16] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-26 20:54:16] ANSI_COLOR="0;31"
[2025-07-26 20:54:16] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-26 20:54:16] HOME_URL="https://www.centos.org/"
[2025-07-26 20:54:16] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-26 20:54:16] 
[2025-07-26 20:54:16] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-26 20:54:16] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-26 20:54:16] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-26 20:54:16] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-26 20:54:16] 
[2025-07-26 20:54:16] 2025-07-26 18:16:42,918 | INFO     | ***************************************
[2025-07-26 20:54:16] 2025-07-26 18:16:43,421 | INFO     | executing command: df -mP /var/lib/boinc/slots/5
[2025-07-26 20:54:16] 2025-07-26 18:16:43,491 | INFO     | sufficient remaining disk space (496186163200 B)
[2025-07-26 20:54:16] 2025-07-26 18:16:43,491 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-26 20:54:16] 2025-07-26 18:16:43,491 | INFO     | current server update state: UPDATING_FINAL
[2025-07-26 20:54:16] 2025-07-26 18:16:43,491 | INFO     | update_server=False
[2025-07-26 20:54:16] 2025-07-26 18:16:43,492 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-26 20:54:16] 2025-07-26 18:16:43,492 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-26 20:54:16] 2025-07-26 18:16:43,492 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-26 20:54:16] 2025-07-26 18:16:43,493 | INFO     | aborting loop
[2025-07-26 20:54:16] 2025-07-26 18:16:43,829 | INFO     | all data control threads have been joined
[2025-07-26 20:54:16] 2025-07-26 18:16:43,928 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-26 20:54:16] 2025-07-26 18:16:44,497 | INFO     | [job] retrieve thread has finished
[2025-07-26 20:54:16] 2025-07-26 18:16:44,499 | INFO     | [job] job monitor thread has finished
[2025-07-26 20:54:16] 2025-07-26 18:16:44,647 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-26 20:54:16] 2025-07-26 18:16:44,765 | INFO     | all job control threads have been joined
[2025-07-26 20:54:16] 2025-07-26 18:16:44,823 | INFO     | all payload control threads have been joined
[2025-07-26 20:54:16] 2025-07-26 18:16:44,835 | INFO     | [data] control thread has finished
[2025-07-26 20:54:16] 2025-07-26 18:16:44,881 | INFO     | [payload] validate_post thread has finished
[2025-07-26 20:54:16] 2025-07-26 18:16:44,944 | INFO     | [job] validate thread has finished
[2025-07-26 20:54:16] 2025-07-26 18:16:45,444 | INFO     | [job] create_data_payload thread has finished
[2025-07-26 20:54:16] 2025-07-26 18:16:45,464 | INFO     | [payload] validate_pre thread has finished
[2025-07-26 20:54:16] 2025-07-26 18:16:45,720 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-26 20:54:16] 2025-07-26 18:16:45,771 | INFO     | [job] control thread has finished
[2025-07-26 20:54:16] 2025-07-26 18:16:45,804 | INFO     | [payload] execute_payloads thread has finished
[2025-07-26 20:54:16] 2025-07-26 18:16:45,814 | INFO     | [data] copytool_in thread has finished
[2025-07-26 20:54:16] 2025-07-26 18:16:45,829 | INFO     | [payload] control thread has finished
[2025-07-26 20:54:16] 2025-07-26 18:16:45,934 | INFO     | [data] copytool_out thread has finished
[2025-07-26 20:54:16] 2025-07-26 18:16:46,063 | INFO     | [payload] failed_post thread has finished
[2025-07-26 20:54:16] 2025-07-26 18:16:46,725 | INFO     | [job] queue monitor thread has finished
[2025-07-26 20:54:16] 2025-07-26 18:16:47,500 | INFO     | [data] queue_monitor thread has finished
[2025-07-26 20:54:16] 2025-07-26 18:16:48,475 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139845387327296)>', '<ExcThread(monitor, started 139844697171712)>']
[2025-07-26 20:54:16] 2025-07-26 18:16:53,501 | INFO     | all workflow threads have been joined
[2025-07-26 20:54:16] 2025-07-26 18:16:53,502 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-26 20:54:16] 2025-07-26 18:16:53,502 | INFO     | traces error code: 0
[2025-07-26 20:54:16] 2025-07-26 18:16:53,502 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-26 20:54:16] 2025-07-26 18:17:12,414 | INFO     | PID=29840 has CPU usage=1.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-07-26 20:54:16] 2025-07-26 18:17:12,414 | INFO     | .. there are 9 such processes running
[2025-07-26 20:54:16] 2025-07-26 18:17:12,416 | INFO     | found 0 job(s) in 20 queues
[2025-07-26 20:54:16] 2025-07-26 18:17:12,416 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-26 20:54:16] 2025-07-26 18:17:12,416 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-26 20:54:16] 2025-07-26 18:17:12,416 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-26 20:54:16] 2025-07-26 18:17:12,416 | CRITICAL | thread 'MainThread' is not alive
[2025-07-26 20:54:16] 2025-07-26 18:17:12,416 | INFO     | [monitor] control thread has ended
[2025-07-26 20:54:16] 2025-07-26 18:17:12,796 [wrapper] ==== pilot stdout END ====
[2025-07-26 20:54:16] 2025-07-26 18:17:12,832 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-26 20:54:16] 2025-07-26 18:17:12,946 [wrapper] pilotpid: 29840
[2025-07-26 20:54:16] 2025-07-26 18:17:13,074 [wrapper] Pilot exit status: 0
[2025-07-26 20:54:16] 2025-07-26 18:17:13,536 [wrapper] pandaids: 6745066892
[2025-07-26 20:54:16] 2025-07-26 18:17:14,383 [wrapper] cleanup supervisor_pilot 16261 29841
[2025-07-26 20:54:16] 2025-07-26 18:17:14,487 [wrapper] Test setup, not cleaning
[2025-07-26 20:54:16] 2025-07-26 18:17:14,583 [wrapper] apfmon messages muted
[2025-07-26 20:54:16] 2025-07-26 18:17:14,682 [wrapper] ==== wrapper stdout END ====
[2025-07-26 20:54:16] 2025-07-26 18:17:14,769 [wrapper] ==== wrapper stderr END ====
[2025-07-26 20:54:16]  *** Error codes and diagnostics ***
[2025-07-26 20:54:16]     "exeErrorCode": 0,
[2025-07-26 20:54:16]     "exeErrorDiag": "",
[2025-07-26 20:54:16]     "pilotErrorCode": 0,
[2025-07-26 20:54:16]     "pilotErrorDiag": "",
[2025-07-26 20:54:16]  *** Listing of results directory ***
[2025-07-26 20:54:16] total 358536
[2025-07-26 20:54:16] -rw-r--r--. 1 boinc boinc    530466 Jul 26 02:06 pilot3.tar.gz
[2025-07-26 20:54:16] -rw-r--r--. 1 boinc boinc      5112 Jul 26 02:11 queuedata.json
[2025-07-26 20:54:16] -rwx------. 1 boinc boinc     36292 Jul 26 02:13 runpilot2-wrapper.sh
[2025-07-26 20:54:16] -rw-r--r--. 1 boinc boinc       100 Jul 26 15:43 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-26 20:54:16] -rwxr-xr-x. 1 boinc boinc      7986 Jul 26 15:43 run_atlas
[2025-07-26 20:54:16] -rw-r--r--. 1 boinc boinc       105 Jul 26 15:43 job.xml
[2025-07-26 20:54:16] -rw-r--r--. 1 boinc boinc      6389 Jul 26 15:43 init_data.xml
[2025-07-26 20:54:16] -rw-r--r--. 2 boinc boinc 149141754 Jul 26 15:43 EVNT.45743347._001641.pool.root.1
[2025-07-26 20:54:16] -rw-r--r--. 2 boinc boinc     15095 Jul 26 15:43 start_atlas.sh
[2025-07-26 20:54:16] drwxrwx--x. 2 boinc boinc        68 Jul 26 15:43 shared
[2025-07-26 20:54:16] -rw-r--r--. 2 boinc boinc    542893 Jul 26 15:43 input.tar.gz
[2025-07-26 20:54:16] -rw-r--r--. 1 boinc boinc         0 Jul 26 15:43 boinc_lockfile
[2025-07-26 20:54:16] -rw-r--r--. 1 boinc boinc      2563 Jul 26 15:43 pandaJob.out
[2025-07-26 20:54:16] -rw-------. 1 boinc boinc    980133 Jul 26 15:44 agis_schedconf.cvmfs.json
[2025-07-26 20:54:16] drwx------. 4 boinc boinc      4096 Jul 26 15:44 pilot3
[2025-07-26 20:54:16] -rw-------. 1 boinc boinc 210529958 Jul 26 20:13 HITS.45743349._029248.pool.root.1
[2025-07-26 20:54:16] -rw-r--r--. 1 boinc boinc       531 Jul 26 20:14 boinc_task_state.xml
[2025-07-26 20:54:16] -rw-------. 1 boinc boinc      1031 Jul 26 20:15 memory_monitor_summary.json
[2025-07-26 20:54:16] -rw-------. 1 boinc boinc   1593052 Jul 26 20:15 agis_ddmendpoints.agis.ALL.json
[2025-07-26 20:54:16] -rw-------. 1 boinc boinc    405938 Jul 26 20:15 log.45743349._029248.job.log.tgz.1
[2025-07-26 20:54:16] -rw-------. 1 boinc boinc      7777 Jul 26 20:16 heartbeat.json
[2025-07-26 20:54:16] -rw-------. 1 boinc boinc        95 Jul 26 20:17 pilot_heartbeat.json
[2025-07-26 20:54:16] -rw-------. 1 boinc boinc       890 Jul 26 20:17 pilotlog.txt
[2025-07-26 20:54:16] -rw-------. 1 boinc boinc   1398690 Jul 26 20:17 log.45743349._029248.job.log.1
[2025-07-26 20:54:16] -rw-------. 1 boinc boinc       357 Jul 26 20:17 output.list
[2025-07-26 20:54:16] -rw-r--r--. 1 boinc boinc       620 Jul 26 20:17 runtime_log
[2025-07-26 20:54:16] -rw-------. 1 boinc boinc   1822720 Jul 26 20:17 result.tar.gz
[2025-07-26 20:54:16] -rw-r--r--. 1 boinc boinc      8660 Jul 26 20:17 runtime_log.err
[2025-07-26 20:54:16] -rw-------. 1 boinc boinc       657 Jul 26 20:17 2PFMDmIihz7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmKnQLDmdZjE9m.diag
[2025-07-26 20:54:16] -rw-r--r--. 1 boinc boinc      8192 Jul 26 20:54 boinc_mmap_file
[2025-07-26 20:54:16] -rw-r--r--. 1 boinc boinc        28 Jul 26 20:54 wrapper_checkpoint.txt
[2025-07-26 20:54:16] -rw-r--r--. 1 boinc boinc     20535 Jul 26 20:54 stderr.txt
[2025-07-26 20:54:17] HITS file was successfully produced:
[2025-07-26 20:54:17] -rw-------. 1 boinc boinc 210529958 Jul 26 20:13 shared/HITS.pool.root.1
[2025-07-26 20:54:17]  *** Contents of shared directory: ***
[2025-07-26 20:54:17] total 353572
[2025-07-26 20:54:17] -rw-r--r--. 2 boinc boinc 149141754 Jul 26 15:43 ATLAS.root_0
[2025-07-26 20:54:17] -rw-r--r--. 2 boinc boinc     15095 Jul 26 15:43 start_atlas.sh
[2025-07-26 20:54:17] -rw-r--r--. 2 boinc boinc    542893 Jul 26 15:43 input.tar.gz
[2025-07-26 20:54:17] -rw-------. 1 boinc boinc 210529958 Jul 26 20:13 HITS.pool.root.1
[2025-07-26 20:54:17] -rw-------. 1 boinc boinc   1822720 Jul 26 20:17 result.tar.gz
20:54:18 (25797): run_atlas exited; CPU time 63094.928994
20:54:18 (25797): called boinc_finish(0)

</stderr_txt>
]]>

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