Stderr output

<core_client_version>8.0.3</core_client_version>
<![CDATA[
<stderr_txt>
13:18:15 (3679209): wrapper (7.7.26015): starting
13:18:15 (3679209): wrapper: running run_atlas (--nthreads 4)
[2025-07-27 13:18:15] Arguments: --nthreads 4
[2025-07-27 13:18:15] Threads: 4
[2025-07-27 13:18:15] Checking for CVMFS
[2025-07-27 13:18:15] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-27 13:18:15] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-27 13:18:15] Running cvmfs_config stat atlas.cern.ch
[2025-07-27 13:18:15] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-27 13:18:15] 2.12.7.0 6878 6857 64332 148811 1 57 5126632 6144000 1836 130560 0 11328825 99.960 362855 1117 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.101.46:3128 1
[2025-07-27 13:18:15] CVMFS is ok
[2025-07-27 13:18:15] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-27 13:18:15] Checking for apptainer binary...
[2025-07-27 13:18:15] which: no apptainer in (/usr/local/sbin:/usr/local/bin:/usr/bin:/var/lib/snapd/snap/bin)
[2025-07-27 13:18:15] apptainer is not installed, using version from CVMFS
[2025-07-27 13:18:15] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-27 13:18:16] Ryzen3
[2025-07-27 13:18:16] apptainer works
[2025-07-27 13:18:16] Set ATHENA_PROC_NUMBER=4
[2025-07-27 13:18:16] Set ATHENA_CORE_NUMBER=4
[2025-07-27 13:18:16] Starting ATLAS job with PandaID=6745059112
[2025-07-27 13:18:16] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-27 15:33:10]  *** The last 200 lines of the pilot log: ***
[2025-07-27 15:33:10] 2025-07-27 13:32:56,730 | INFO     | CPU arch script returned: x86-64-v3
[2025-07-27 15:33:10] 2025-07-27 13:32:56,732 | INFO     | found 6 cores (6 cores per socket, 1 socket) HT, CPU MHz: 3978.1702499999997
[2025-07-27 15:33:10] 2025-07-27 13:32:56,734 | INFO     | using path: /var/lib/boinc/slots/0/PanDA_Pilot-6745059112/memory_monitor_summary.json (trf name=prmon)
[2025-07-27 15:33:10] 2025-07-27 13:32:56,735 | INFO     | extracted standard info from prmon json
[2025-07-27 15:33:10] 2025-07-27 13:32:56,735 | INFO     | extracted standard memory fields from prmon json
[2025-07-27 15:33:10] 2025-07-27 13:32:56,735 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-27 15:33:10] 2025-07-27 13:32:56,735 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-27 15:33:10] 2025-07-27 13:32:56,735 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-27 15:33:10] 2025-07-27 13:32:56,737 | INFO     | fitting pss+swap vs Time
[2025-07-27 15:33:10] 2025-07-27 13:32:56,737 | INFO     | sum of square deviations: 713140813.0
[2025-07-27 15:33:10] 2025-07-27 13:32:56,738 | INFO     | sum of deviations: -30181907204.0
[2025-07-27 15:33:10] 2025-07-27 13:32:56,738 | INFO     | mean x: 1753619121.5
[2025-07-27 15:33:10] 2025-07-27 13:32:56,738 | INFO     | mean y: 2482337.257575758
[2025-07-27 15:33:10] 2025-07-27 13:32:56,738 | INFO     | -- intersect: 74220040260.52426
[2025-07-27 15:33:10] 2025-07-27 13:32:56,738 | INFO     | intersect: 74220040260.52426
[2025-07-27 15:33:10] 2025-07-27 13:32:56,738 | INFO     | chi2: 1.2399325099212888
[2025-07-27 15:33:10] 2025-07-27 13:32:56,738 | INFO     | sum of square deviations: 635130048.0
[2025-07-27 15:33:10] 2025-07-27 13:32:56,739 | INFO     | sum of deviations: -27959148456.000004
[2025-07-27 15:33:10] 2025-07-27 13:32:56,739 | INFO     | mean x: 1753618969.0
[2025-07-27 15:33:10] 2025-07-27 13:32:56,739 | INFO     | mean y: 2486684.496062992
[2025-07-27 15:33:10] 2025-07-27 13:32:56,739 | INFO     | -- intersect: 77198791982.79092
[2025-07-27 15:33:10] 2025-07-27 13:32:56,739 | INFO     | intersect: 77198791982.79092
[2025-07-27 15:33:10] 2025-07-27 13:32:56,739 | INFO     | chi2: 1.233202200566264
[2025-07-27 15:33:10] 2025-07-27 13:32:56,739 | INFO     | current chi2=1.233202200566264 (change=0.5427964265129297 %)
[2025-07-27 15:33:10] 2025-07-27 13:32:56,739 | INFO     | right removable region: 126
[2025-07-27 15:33:10] 2025-07-27 13:32:56,739 | INFO     | sum of square deviations: 635130048.0
[2025-07-27 15:33:10] 2025-07-27 13:32:56,740 | INFO     | sum of deviations: -40698035571.0
[2025-07-27 15:33:10] 2025-07-27 13:32:56,740 | INFO     | mean x: 1753619274.0
[2025-07-27 15:33:10] 2025-07-27 13:32:56,740 | INFO     | mean y: 2502207.8897637795
[2025-07-27 15:33:10] 2025-07-27 13:32:56,740 | INFO     | -- intersect: 112371393926.96523
[2025-07-27 15:33:10] 2025-07-27 13:32:56,740 | INFO     | intersect: 112371393926.96523
[2025-07-27 15:33:10] 2025-07-27 13:32:56,740 | INFO     | chi2: 0.14362371962094378
[2025-07-27 15:33:10] 2025-07-27 13:32:56,740 | INFO     | current chi2=0.14362371962094378 (change=88.41681152226091 %)
[2025-07-27 15:33:10] 2025-07-27 13:32:56,741 | INFO     | sum of square deviations: 563026370.5
[2025-07-27 15:33:10] 2025-07-27 13:32:56,741 | INFO     | sum of deviations: -36207262297.0
[2025-07-27 15:33:10] 2025-07-27 13:32:56,741 | INFO     | mean x: 1753619426.5
[2025-07-27 15:33:10] 2025-07-27 13:32:56,741 | INFO     | mean y: 2492697.5409836066
[2025-07-27 15:33:10] 2025-07-27 13:32:56,741 | INFO     | -- intersect: 112774756788.85535
[2025-07-27 15:33:10] 2025-07-27 13:32:56,741 | INFO     | intersect: 112774756788.85535
[2025-07-27 15:33:10] 2025-07-27 13:32:56,741 | INFO     | chi2: 0.14355805300234267
[2025-07-27 15:33:10] 2025-07-27 13:32:56,741 | INFO     | current chi2=0.14355805300234267 (change=0.04572129086645032 %)
[2025-07-27 15:33:10] 2025-07-27 13:32:56,742 | INFO     | left removable region: 20
[2025-07-27 15:33:10] 2025-07-27 13:32:56,742 | INFO     | sum of square deviations: 369281342.5
[2025-07-27 15:33:10] 2025-07-27 13:32:56,742 | INFO     | sum of deviations: -24569445891.499996
[2025-07-27 15:33:10] 2025-07-27 13:32:56,742 | INFO     | mean x: 1753619548.5
[2025-07-27 15:33:10] 2025-07-27 13:32:56,742 | INFO     | mean y: 2475089.669811321
[2025-07-27 15:33:10] 2025-07-27 13:32:56,742 | INFO     | -- intersect: 116676283518.39488
[2025-07-27 15:33:10] 2025-07-27 13:32:56,742 | INFO     | intersect: 116676283518.39488
[2025-07-27 15:33:10] 2025-07-27 13:32:56,742 | INFO     | chi2: 0.12769217214863945
[2025-07-27 15:33:10] 2025-07-27 13:32:56,743 | INFO     | -- intersect: 116676283518.39488
[2025-07-27 15:33:10] 2025-07-27 13:32:56,743 | INFO     | current memory leak: -66.53 B/s (using 106 data points, chi2=0.13)
[2025-07-27 15:33:10] 2025-07-27 13:32:56,743 | INFO     | could have reported an average CPU frequency of 3963 MHz (8 samples)
[2025-07-27 15:33:10] 2025-07-27 13:32:56,743 | INFO     | ..............................
[2025-07-27 15:33:10] 2025-07-27 13:32:56,743 | INFO     | . Timing measurements:
[2025-07-27 15:33:10] 2025-07-27 13:32:56,743 | INFO     | . get job = 0 s
[2025-07-27 15:33:10] 2025-07-27 13:32:56,743 | INFO     | . initial setup = 1 s
[2025-07-27 15:33:10] 2025-07-27 13:32:56,743 | INFO     | . payload setup = 4 s
[2025-07-27 15:33:10] 2025-07-27 13:32:56,743 | INFO     | . stage-in = 0 s
[2025-07-27 15:33:10] 2025-07-27 13:32:56,743 | INFO     | . payload execution = 8046 s
[2025-07-27 15:33:10] 2025-07-27 13:32:56,743 | INFO     | . stage-out = 0 s
[2025-07-27 15:33:10] 2025-07-27 13:32:56,743 | INFO     | . log creation = 0 s
[2025-07-27 15:33:10] 2025-07-27 13:32:56,743 | INFO     | ..............................
[2025-07-27 15:33:10] 2025-07-27 13:32:56,808 | INFO     | 
[2025-07-27 15:33:10] 2025-07-27 13:32:56,808 | INFO     | job summary report
[2025-07-27 15:33:10] 2025-07-27 13:32:56,808 | INFO     | --------------------------------------------------
[2025-07-27 15:33:10] 2025-07-27 13:32:56,808 | INFO     | PanDA job id: 6745059112
[2025-07-27 15:33:10] 2025-07-27 13:32:56,808 | INFO     | task id: 45743349
[2025-07-27 15:33:10] 2025-07-27 13:32:56,808 | INFO     | errors: (none)
[2025-07-27 15:33:10] 2025-07-27 13:32:56,808 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-27 15:33:10] 2025-07-27 13:32:56,809 | INFO     | pilot state: finished 
[2025-07-27 15:33:10] 2025-07-27 13:32:56,809 | INFO     | transexitcode: 0
[2025-07-27 15:33:10] 2025-07-27 13:32:56,809 | INFO     | exeerrorcode: 0
[2025-07-27 15:33:10] 2025-07-27 13:32:56,809 | INFO     | exeerrordiag: 
[2025-07-27 15:33:10] 2025-07-27 13:32:56,809 | INFO     | exitcode: 0
[2025-07-27 15:33:10] 2025-07-27 13:32:56,809 | INFO     | exitmsg: OK
[2025-07-27 15:33:10] 2025-07-27 13:32:56,809 | INFO     | cpuconsumptiontime: 30842 s
[2025-07-27 15:33:10] 2025-07-27 13:32:56,809 | INFO     | nevents: 400
[2025-07-27 15:33:10] 2025-07-27 13:32:56,809 | INFO     | neventsw: 0
[2025-07-27 15:33:10] 2025-07-27 13:32:56,809 | INFO     | pid: 3689325
[2025-07-27 15:33:10] 2025-07-27 13:32:56,809 | INFO     | pgrp: 3689325
[2025-07-27 15:33:10] 2025-07-27 13:32:56,809 | INFO     | corecount: 4
[2025-07-27 15:33:10] 2025-07-27 13:32:56,809 | INFO     | event service: False
[2025-07-27 15:33:10] 2025-07-27 13:32:56,809 | INFO     | sizes: {0: 2397473, 1: 2397473, 3: 2397763, 11: 2397791, 8054: 2425648, 8056: 2434646, 8057: 2434830, 8059: 2435024}
[2025-07-27 15:33:10] 2025-07-27 13:32:56,809 | INFO     | --------------------------------------------------
[2025-07-27 15:33:10] 2025-07-27 13:32:56,809 | INFO     | 
[2025-07-27 15:33:10] 2025-07-27 13:32:56,809 | INFO     | executing command: ls -lF /var/lib/boinc/slots/0
[2025-07-27 15:33:10] 2025-07-27 13:32:56,826 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-27 15:33:10] 2025-07-27 13:32:56,826 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-27 15:33:10] 2025-07-27 13:32:56,826 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-27 15:33:10] 2025-07-27 13:32:56,826 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-27 15:33:10] 2025-07-27 13:32:56,826 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-27 15:33:10] 2025-07-27 13:32:56,826 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-27 15:33:10] 2025-07-27 13:32:56,826 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-27 15:33:10] 2025-07-27 13:32:56,826 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-27 15:33:10] 2025-07-27 13:32:56,826 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-27 15:33:10] 2025-07-27 13:32:56,826 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-27 15:33:10] 2025-07-27 13:32:56,826 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-27 15:33:10] 2025-07-27 13:32:56,826 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-27 15:33:10] 2025-07-27 13:32:56,827 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-27 15:33:10] 2025-07-27 13:32:56,827 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-27 15:33:10] 2025-07-27 13:32:56,827 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-27 15:33:10] 2025-07-27 13:32:56,827 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-27 15:33:10] 2025-07-27 13:32:56,827 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-27 15:33:10] 2025-07-27 13:32:56,827 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-27 15:33:10] 2025-07-27 13:32:56,827 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-27 15:33:10] 2025-07-27 13:32:56,827 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-27 15:33:10] 2025-07-27 13:32:56,827 | INFO     | job 6745059112 has completed (purged errors)
[2025-07-27 15:33:10] 2025-07-27 13:32:56,827 | INFO     | overall cleanup function is called
[2025-07-27 15:33:10] 2025-07-27 13:32:57,585 | WARNING  | process 3689325 can no longer be monitored (due to stat problems) - aborting
[2025-07-27 15:33:10] 2025-07-27 13:32:57,639 | INFO     | using path: /var/lib/boinc/slots/0/memory_monitor_summary.json (trf name=prmon)
[2025-07-27 15:33:10] 2025-07-27 13:32:57,708 | INFO     | number of running child processes to parent process 3689325: 1
[2025-07-27 15:33:10] 2025-07-27 13:32:57,708 | INFO     | maximum number of monitored processes: 6
[2025-07-27 15:33:10] 2025-07-27 13:32:57,708 | INFO     | aborting job monitoring since job object (job id=6745059112) has expired
[2025-07-27 15:33:10] 2025-07-27 13:32:57,834 | INFO     | --- collectZombieJob: --- 10, [3689325]
[2025-07-27 15:33:10] 2025-07-27 13:32:57,835 | INFO     | zombie collector waiting for pid 3689325
[2025-07-27 15:33:10] 2025-07-27 13:32:57,835 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-27 15:33:10] 2025-07-27 13:32:57,835 | INFO     | collected zombie processes
[2025-07-27 15:33:10] 2025-07-27 13:32:57,835 | INFO     | will attempt to kill all subprocesses of pid=3689325
[2025-07-27 15:33:10] 2025-07-27 13:32:57,905 | INFO     | process IDs to be killed: [3689325] (in reverse order)
[2025-07-27 15:33:10] 2025-07-27 13:32:57,945 | WARNING  | found no corresponding commands to process id(s)
[2025-07-27 15:33:10] 2025-07-27 13:32:57,945 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-27 15:33:10] 2025-07-27 13:32:57,948 | INFO     | did not find any defunct processes belonging to 3689325
[2025-07-27 15:33:10] 2025-07-27 13:32:57,949 | INFO     | did not find any defunct processes belonging to 3689325
[2025-07-27 15:33:10] 2025-07-27 13:32:57,949 | INFO     | ready for new job
[2025-07-27 15:33:10] 2025-07-27 13:32:57,949 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-27 15:33:10] 2025-07-27 13:32:57,950 | INFO     | ***************************************
[2025-07-27 15:33:10] 2025-07-27 13:32:57,951 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-27 15:33:10] 2025-07-27 13:32:57,951 | INFO     | ***************************************
[2025-07-27 15:33:10] 2025-07-27 13:32:57,951 | INFO     | 
[2025-07-27 15:33:10] 2025-07-27 13:32:57,951 | INFO     | architecture information:
[2025-07-27 15:33:10] 2025-07-27 13:32:57,952 | INFO     | executing command: cat /etc/os-release
[2025-07-27 15:33:10] 2025-07-27 13:32:57,963 | INFO     | cat /etc/os-release:
[2025-07-27 15:33:10] NAME="CentOS Linux"
[2025-07-27 15:33:10] VERSION="7 (Core)"
[2025-07-27 15:33:10] ID="centos"
[2025-07-27 15:33:10] ID_LIKE="rhel fedora"
[2025-07-27 15:33:10] VERSION_ID="7"
[2025-07-27 15:33:10] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-27 15:33:10] ANSI_COLOR="0;31"
[2025-07-27 15:33:10] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-27 15:33:10] HOME_URL="https://www.centos.org/"
[2025-07-27 15:33:10] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-27 15:33:10] 
[2025-07-27 15:33:10] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-27 15:33:10] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-27 15:33:10] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-27 15:33:10] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-27 15:33:10] 
[2025-07-27 15:33:10] 2025-07-27 13:32:57,963 | INFO     | ***************************************
[2025-07-27 15:33:10] 2025-07-27 13:32:58,464 | INFO     | executing command: df -mP /var/lib/boinc/slots/0
[2025-07-27 15:33:10] 2025-07-27 13:32:58,478 | INFO     | sufficient remaining disk space (193706590208 B)
[2025-07-27 15:33:10] 2025-07-27 13:32:58,478 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-27 15:33:10] 2025-07-27 13:32:58,478 | INFO     | current server update state: UPDATING_FINAL
[2025-07-27 15:33:10] 2025-07-27 13:32:58,478 | INFO     | update_server=False
[2025-07-27 15:33:10] 2025-07-27 13:32:58,478 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-27 15:33:10] 2025-07-27 13:32:58,478 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-27 15:33:10] 2025-07-27 13:32:58,479 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-27 15:33:10] 2025-07-27 13:32:58,479 | INFO     | will abort loop
[2025-07-27 15:33:10] 2025-07-27 13:32:58,479 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-07-27 15:33:10] 2025-07-27 13:32:58,479 | INFO     | found 0 job(s) in 20 queues
[2025-07-27 15:33:10] 2025-07-27 13:32:58,479 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-27 15:33:10] 2025-07-27 13:32:58,479 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-27 15:33:10] 2025-07-27 13:32:58,822 | INFO     | all data control threads have been joined
[2025-07-27 15:33:10] 2025-07-27 13:32:59,046 | INFO     | all payload control threads have been joined
[2025-07-27 15:33:10] 2025-07-27 13:32:59,103 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-27 15:33:10] 2025-07-27 13:32:59,304 | INFO     | all job control threads have been joined
[2025-07-27 15:33:10] 2025-07-27 13:32:59,481 | INFO     | [job] retrieve thread has finished
[2025-07-27 15:33:10] 2025-07-27 13:32:59,484 | INFO     | [job] queue monitor thread has finished
[2025-07-27 15:33:10] 2025-07-27 13:32:59,484 | INFO     | [job] job monitor thread has finished
[2025-07-27 15:33:10] 2025-07-27 13:32:59,536 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-27 15:33:10] 2025-07-27 13:32:59,827 | INFO     | [data] control thread has finished
[2025-07-27 15:33:10] 2025-07-27 13:33:00,034 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-27 15:33:10] 2025-07-27 13:33:00,052 | INFO     | [payload] control thread has finished
[2025-07-27 15:33:10] 2025-07-27 13:33:00,098 | INFO     | [job] validate thread has finished
[2025-07-27 15:33:10] 2025-07-27 13:33:00,112 | INFO     | [payload] execute_payloads thread has finished
[2025-07-27 15:33:10] 2025-07-27 13:33:00,239 | INFO     | [job] create_data_payload thread has finished
[2025-07-27 15:33:10] 2025-07-27 13:33:00,287 | INFO     | [payload] validate_pre thread has finished
[2025-07-27 15:33:10] 2025-07-27 13:33:00,291 | INFO     | [data] copytool_in thread has finished
[2025-07-27 15:33:10] 2025-07-27 13:33:00,309 | INFO     | [job] control thread has finished
[2025-07-27 15:33:10] 2025-07-27 13:33:00,684 | INFO     | [payload] validate_post thread has finished
[2025-07-27 15:33:10] 2025-07-27 13:33:01,031 | INFO     | [payload] failed_post thread has finished
[2025-07-27 15:33:10] 2025-07-27 13:33:01,108 | INFO     | [data] copytool_out thread has finished
[2025-07-27 15:33:10] 2025-07-27 13:33:04,039 | INFO     | [data] queue_monitor thread has finished
[2025-07-27 15:33:10] 2025-07-27 13:33:05,374 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140247279335232)>', '<ExcThread(monitor, started 140246880593664)>']
[2025-07-27 15:33:10] 2025-07-27 13:33:05,512 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-27 15:33:10] 2025-07-27 13:33:05,512 | INFO     | [monitor] control thread has ended
[2025-07-27 15:33:10] 2025-07-27 13:33:10,399 | INFO     | all workflow threads have been joined
[2025-07-27 15:33:10] 2025-07-27 13:33:10,400 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-27 15:33:10] 2025-07-27 13:33:10,400 | INFO     | traces error code: 0
[2025-07-27 15:33:10] 2025-07-27 13:33:10,400 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-27 15:33:10] 2025-07-27 13:33:10,480 [wrapper] ==== pilot stdout END ====
[2025-07-27 15:33:10] 2025-07-27 13:33:10,482 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-27 15:33:10] 2025-07-27 13:33:10,484 [wrapper] pilotpid: 3682840
[2025-07-27 15:33:10] 2025-07-27 13:33:10,486 [wrapper] Pilot exit status: 0
[2025-07-27 15:33:10] 2025-07-27 13:33:10,495 [wrapper] pandaids: 6745059112
[2025-07-27 15:33:10] 2025-07-27 13:33:10,519 [wrapper] cleanup supervisor_pilot 3753977 3682841
[2025-07-27 15:33:10] 2025-07-27 13:33:10,522 [wrapper] Test setup, not cleaning
[2025-07-27 15:33:10] 2025-07-27 13:33:10,524 [wrapper] apfmon messages muted
[2025-07-27 15:33:10] 2025-07-27 13:33:10,526 [wrapper] ==== wrapper stdout END ====
[2025-07-27 15:33:10] 2025-07-27 13:33:10,528 [wrapper] ==== wrapper stderr END ====
[2025-07-27 15:33:10]  *** Error codes and diagnostics ***
[2025-07-27 15:33:10]     "exeErrorCode": 0,
[2025-07-27 15:33:10]     "exeErrorDiag": "",
[2025-07-27 15:33:10]     "pilotErrorCode": 0,
[2025-07-27 15:33:10]     "pilotErrorDiag": "",
[2025-07-27 15:33:10]  *** Listing of results directory ***
[2025-07-27 15:33:10] insgesamt 350532
[2025-07-27 15:33:10] -rw-r--r-- 1 boinc boinc      5112 25. Jul 19:32 queuedata.json
[2025-07-27 15:33:10] -rw-r--r-- 1 boinc boinc    530466 25. Jul 19:32 pilot3.tar.gz
[2025-07-27 15:33:10] -rwx------ 1 boinc boinc     36292 25. Jul 19:32 runpilot2-wrapper.sh
[2025-07-27 15:33:10] -rw-r--r-- 1 boinc boinc       100 27. Jul 13:18 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-27 15:33:10] -rwxr-xr-x 1 boinc boinc      7986 27. Jul 13:18 run_atlas
[2025-07-27 15:33:10] -rw-r--r-- 1 boinc boinc       105 27. Jul 13:18 job.xml
[2025-07-27 15:33:10] -rw-r--r-- 1 boinc boinc      6873 27. Jul 13:18 init_data.xml
[2025-07-27 15:33:10] -rw-r--r-- 2 boinc boinc 145764604 27. Jul 13:18 EVNT.45743347._001394.pool.root.1
[2025-07-27 15:33:10] -rw-r--r-- 2 boinc boinc     15095 27. Jul 13:18 start_atlas.sh
[2025-07-27 15:33:10] drwxrwx--x 2 boinc boinc      4096 27. Jul 13:18 shared
[2025-07-27 15:33:10] -rw-r--r-- 2 boinc boinc    542892 27. Jul 13:18 input.tar.gz
[2025-07-27 15:33:10] -rw-r--r-- 1 boinc boinc         0 27. Jul 13:18 boinc_lockfile
[2025-07-27 15:33:10] -rw-r--r-- 1 boinc boinc      2562 27. Jul 13:18 pandaJob.out
[2025-07-27 15:33:10] -rw------- 1 boinc boinc    980109 27. Jul 13:18 agis_schedconf.cvmfs.json
[2025-07-27 15:33:10] -rw------- 1 boinc boinc   1593052 27. Jul 13:18 agis_ddmendpoints.agis.ALL.json
[2025-07-27 15:33:10] drwx------ 4 boinc boinc      4096 27. Jul 13:18 pilot3
[2025-07-27 15:33:10] -rw------- 1 boinc boinc 207206558 27. Jul 15:32 HITS.45743349._024515.pool.root.1
[2025-07-27 15:33:10] -rw------- 1 boinc boinc        95 27. Jul 15:32 pilot_heartbeat.json
[2025-07-27 15:33:10] -rw-r--r-- 1 boinc boinc       529 27. Jul 15:32 boinc_task_state.xml
[2025-07-27 15:33:10] -rw------- 1 boinc boinc      1014 27. Jul 15:32 memory_monitor_summary.json
[2025-07-27 15:33:10] -rw-r--r-- 1 boinc boinc        27 27. Jul 15:32 wrapper_checkpoint.txt
[2025-07-27 15:33:10] -rw-r--r-- 1 boinc boinc      8192 27. Jul 15:32 boinc_mmap_file
[2025-07-27 15:33:10] -rw------- 1 boinc boinc    270953 27. Jul 15:32 log.45743349._024515.job.log.tgz.1
[2025-07-27 15:33:10] -rw------- 1 boinc boinc      7723 27. Jul 15:32 heartbeat.json
[2025-07-27 15:33:10] -rw------- 1 boinc boinc      4483 27. Jul 15:33 pilotlog.txt
[2025-07-27 15:33:10] -rw------- 1 boinc boinc    771324 27. Jul 15:33 log.45743349._024515.job.log.1
[2025-07-27 15:33:10] -rw------- 1 boinc boinc       357 27. Jul 15:33 output.list
[2025-07-27 15:33:10] -rw-r--r-- 1 boinc boinc       620 27. Jul 15:33 runtime_log
[2025-07-27 15:33:10] -rw------- 1 boinc boinc   1064960 27. Jul 15:33 result.tar.gz
[2025-07-27 15:33:10] -rw------- 1 boinc boinc       643 27. Jul 15:33 rWJMDm4Sbz7n9Rq4apOajLDm4fhM0noT9bVof3QYDmUJzKDmaz0b5n.diag
[2025-07-27 15:33:10] -rw-r--r-- 1 boinc boinc      8612 27. Jul 15:33 runtime_log.err
[2025-07-27 15:33:10] -rw-r--r-- 1 boinc boinc     20919 27. Jul 15:33 stderr.txt
[2025-07-27 15:33:10] HITS file was successfully produced:
[2025-07-27 15:33:10] -rw------- 1 boinc boinc 207206558 27. Jul 15:32 shared/HITS.pool.root.1
[2025-07-27 15:33:10]  *** Contents of shared directory: ***
[2025-07-27 15:33:10] insgesamt 346300
[2025-07-27 15:33:10] -rw-r--r-- 2 boinc boinc 145764604 27. Jul 13:18 ATLAS.root_0
[2025-07-27 15:33:10] -rw-r--r-- 2 boinc boinc     15095 27. Jul 13:18 start_atlas.sh
[2025-07-27 15:33:10] -rw-r--r-- 2 boinc boinc    542892 27. Jul 13:18 input.tar.gz
[2025-07-27 15:33:10] -rw------- 1 boinc boinc 207206558 27. Jul 15:32 HITS.pool.root.1
[2025-07-27 15:33:10] -rw------- 1 boinc boinc   1064960 27. Jul 15:33 result.tar.gz
15:33:12 (3679209): run_atlas exited; CPU time 30905.256606
15:33:12 (3679209): called boinc_finish(0)

</stderr_txt>
]]>

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