Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
22:37:56 (2873817): wrapper (7.7.26015): starting
22:37:56 (2873817): wrapper: running run_atlas (--nthreads 8)
[2025-07-25 22:37:56] Arguments: --nthreads 8
[2025-07-25 22:37:56] Threads: 8
[2025-07-25 22:37:56] Checking for CVMFS
[2025-07-25 22:37:56] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-25 22:37:56] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-25 22:37:56] Running cvmfs_config stat atlas.cern.ch
[2025-07-25 22:37:56] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-25 22:37:56] 2.13.1.0 4026694 6144 96488 148761 0 188 20738369 40960000 12896 16776704 0 81804300 99.999 226006 60623 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-07-25 22:37:56] CVMFS is ok
[2025-07-25 22:37:56] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-25 22:37:56] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-25 22:37:56] Further information can be found at the LHC@home message board.
[2025-07-25 22:37:56] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-25 22:37:56] Checking for apptainer binary...
[2025-07-25 22:37:56] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-25 22:37:56] Running /usr/bin/apptainer --version
[2025-07-25 22:37:56] apptainer version 1.4.1-1.el9
[2025-07-25 22:37:56] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-25 22:37:56] c-208-38.aglt2.org
[2025-07-25 22:37:56] apptainer works
[2025-07-25 22:37:56] Set ATHENA_PROC_NUMBER=8
[2025-07-25 22:37:56] Set ATHENA_CORE_NUMBER=8
[2025-07-25 22:37:56] Starting ATLAS job with PandaID=6745061649
[2025-07-25 22:37:56] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/12 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-25 23:33:21]  *** The last 200 lines of the pilot log: ***
[2025-07-25 23:33:21]  storage_token=
[2025-07-25 23:33:21]  surl=/tmp/boinchome/slots/12/PanDA_Pilot-6745061649/log.45743349._026640.job.log.tgz.1
[2025-07-25 23:33:21]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/07/a8/log.45743349._026640.job.log.tgz.1
[2025-07-25 23:33:21]  workdir=None
[2025-07-25 23:33:21] ]
[2025-07-25 23:33:21] 2025-07-26 03:32:40,431 | INFO     | transferring file log.45743349._026640.job.log.tgz.1 from /tmp/boinchome/slots/12/PanDA_Pilot-6745061649/log.45743349._026640.job.log.tgz.1 to /tmp/boinchome/slots
[2025-07-25 23:33:21] 2025-07-26 03:32:40,431 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/12/PanDA_Pilot-6745061649/log.45743349._026640.job.log.tgz.1 /tmp/boinchome/slots/12/log.45743349._026640.j
[2025-07-25 23:33:21] 2025-07-26 03:32:40,448 | INFO     | adding to output.list: log.45743349._026640.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/07/a8/log.45743349._026640.job.log.tg
[2025-07-25 23:33:21] 2025-07-26 03:32:40,449 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-25 23:33:21] 2025-07-26 03:32:40,449 | INFO     | summary of transferred files:
[2025-07-25 23:33:21] 2025-07-26 03:32:40,449 | INFO     |  -- lfn=log.45743349._026640.job.log.tgz.1, status_code=0, status=transferred
[2025-07-25 23:33:21] 2025-07-26 03:32:40,449 | INFO     | stage-out finished correctly
[2025-07-25 23:33:21] 2025-07-26 03:32:41,234 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-25 23:33:21] 2025-07-26 03:32:44,143 | INFO     | job 6745061649 has state=finished
[2025-07-25 23:33:21] 2025-07-26 03:32:44,143 | INFO     | preparing for final server update for job 6745061649 in state='finished'
[2025-07-25 23:33:21] 2025-07-26 03:32:44,143 | INFO     | this job has now completed (state=finished)
[2025-07-25 23:33:21] 2025-07-26 03:32:44,143 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-25 23:33:21] 2025-07-26 03:32:44,143 | INFO     | log transfer has been attempted: DONE
[2025-07-25 23:33:21] 2025-07-26 03:32:44,143 | INFO     | job 6745061649 has finished - writing final server update
[2025-07-25 23:33:21] 2025-07-26 03:32:44,144 | INFO     | total number of processed events: 400 (read)
[2025-07-25 23:33:21] 2025-07-26 03:32:44,144 | INFO     | executing command: lscpu
[2025-07-25 23:33:21] 2025-07-26 03:32:44,198 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-25 23:33:21] 2025-07-26 03:32:46,046 | WARNING  | process 2883916 can no longer be monitored (due to stat problems) - aborting
[2025-07-25 23:33:21] 2025-07-26 03:32:46,047 | INFO     | using path: /tmp/boinchome/slots/12/PanDA_Pilot-6745061649/memory_monitor_summary.json (trf name=prmon)
[2025-07-25 23:33:21] 2025-07-26 03:32:46,049 | INFO     | using path: /tmp/boinchome/slots/12/PanDA_Pilot-6745061649/memory_monitor_summary.json (trf name=prmon)
[2025-07-25 23:33:21] 2025-07-26 03:32:46,050 | INFO     | payload log (log.EVNTtoHITS) within allowed size limit (2147483648 B): 3376701 B
[2025-07-25 23:33:21] 2025-07-26 03:32:46,050 | INFO     | payload log (payload.stdout) within allowed size limit (2147483648 B): 15930 B
[2025-07-25 23:33:21] 2025-07-26 03:32:46,050 | INFO     | executing command: df -mP /tmp/boinchome/slots/12
[2025-07-25 23:33:21] 2025-07-26 03:32:47,491 | INFO     | CPU arch script returned: x86-64-v4
[2025-07-25 23:33:21] 2025-07-26 03:32:47,499 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 3675.0541874999985
[2025-07-25 23:33:21] 2025-07-26 03:32:47,504 | INFO     | sufficient remaining disk space (164699832320 B)
[2025-07-25 23:33:21] 2025-07-26 03:32:47,504 | INFO     | work directory size check will use 2537553920 B as a max limit (10% grace limit added)
[2025-07-25 23:33:21] 2025-07-26 03:32:47,506 | INFO     | size of work directory /tmp/boinchome/slots/12/PanDA_Pilot-6745061649: 3666737 B (within 2537553920 B limit)
[2025-07-25 23:33:21] 2025-07-26 03:32:47,506 | INFO     | pfn file=/tmp/boinchome/slots/12/PanDA_Pilot-6745061649/HITS.45743349._026640.pool.root.1 does not exist (skip from workdir size calculation)
[2025-07-25 23:33:21] 2025-07-26 03:32:47,506 | INFO     | total size of present files: 0 B (workdir size: 3666737 B)
[2025-07-25 23:33:21] 2025-07-26 03:32:47,506 | INFO     | output file size check: skipping output file /tmp/boinchome/slots/12/PanDA_Pilot-6745061649/HITS.45743349._026640.pool.root.1 since it does not exist
[2025-07-25 23:33:21] 2025-07-26 03:32:47,516 | INFO     | using path: /tmp/boinchome/slots/12/PanDA_Pilot-6745061649/memory_monitor_summary.json (trf name=prmon)
[2025-07-25 23:33:21] 2025-07-26 03:32:47,516 | INFO     | extracted standard info from prmon json
[2025-07-25 23:33:21] 2025-07-26 03:32:47,517 | INFO     | extracted standard memory fields from prmon json
[2025-07-25 23:33:21] 2025-07-26 03:32:47,517 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-25 23:33:21] 2025-07-26 03:32:47,517 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-25 23:33:21] 2025-07-26 03:32:47,517 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-25 23:33:21] 2025-07-26 03:32:47,518 | INFO     | fitting pss+swap vs Time
[2025-07-25 23:33:21] 2025-07-26 03:32:47,518 | INFO     | sum of square deviations: 32179208.0
[2025-07-25 23:33:21] 2025-07-26 03:32:47,518 | INFO     | sum of deviations: -45782329.999999985
[2025-07-25 23:33:21] 2025-07-26 03:32:47,519 | INFO     | mean x: 1753499216.0
[2025-07-25 23:33:21] 2025-07-26 03:32:47,519 | INFO     | mean y: 2536922.723404255
[2025-07-25 23:33:21] 2025-07-26 03:32:47,519 | INFO     | -- intersect: 2497293156.6758766
[2025-07-25 23:33:21] 2025-07-26 03:32:47,519 | INFO     | intersect: 2497293156.6758766
[2025-07-25 23:33:21] 2025-07-26 03:32:47,519 | INFO     | chi2: 0.0008923023883369614
[2025-07-25 23:33:21] 2025-07-26 03:32:47,519 | INFO     | -- intersect: 2497293156.6758766
[2025-07-25 23:33:21] 2025-07-26 03:32:47,519 | INFO     | current memory leak: -1.42 B/s (using 47 data points, chi2=0.00)
[2025-07-25 23:33:21] 2025-07-26 03:32:47,519 | INFO     | could have reported an average CPU frequency of 3712 MHz (5 samples)
[2025-07-25 23:33:21] 2025-07-26 03:32:47,519 | INFO     | ..............................
[2025-07-25 23:33:21] 2025-07-26 03:32:47,520 | INFO     | . Timing measurements:
[2025-07-25 23:33:21] 2025-07-26 03:32:47,520 | INFO     | . get job = 0 s
[2025-07-25 23:33:21] 2025-07-26 03:32:47,520 | INFO     | . initial setup = 2 s
[2025-07-25 23:33:21] 2025-07-26 03:32:47,520 | INFO     | . payload setup = 4 s
[2025-07-25 23:33:21] 2025-07-26 03:32:47,520 | INFO     | . stage-in = 0 s
[2025-07-25 23:33:21] 2025-07-26 03:32:47,520 | INFO     | . payload execution = 3251 s
[2025-07-25 23:33:21] 2025-07-26 03:32:47,520 | INFO     | . stage-out = 0 s
[2025-07-25 23:33:21] 2025-07-26 03:32:47,520 | INFO     | . log creation = 0 s
[2025-07-25 23:33:21] 2025-07-26 03:32:47,520 | INFO     | ..............................
[2025-07-25 23:33:21] 2025-07-26 03:32:47,577 | INFO     | 
[2025-07-25 23:33:21] 2025-07-26 03:32:47,577 | INFO     | job summary report
[2025-07-25 23:33:21] 2025-07-26 03:32:47,578 | INFO     | --------------------------------------------------
[2025-07-25 23:33:21] 2025-07-26 03:32:47,578 | INFO     | PanDA job id: 6745061649
[2025-07-25 23:33:21] 2025-07-26 03:32:47,578 | INFO     | task id: 45743349
[2025-07-25 23:33:21] 2025-07-26 03:32:47,578 | INFO     | errors: (none)
[2025-07-25 23:33:21] 2025-07-26 03:32:47,578 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-25 23:33:21] 2025-07-26 03:32:47,578 | INFO     | pilot state: finished 
[2025-07-25 23:33:21] 2025-07-26 03:32:47,578 | INFO     | transexitcode: 0
[2025-07-25 23:33:21] 2025-07-26 03:32:47,578 | INFO     | exeerrorcode: 0
[2025-07-25 23:33:21] 2025-07-26 03:32:47,578 | INFO     | exeerrordiag: 
[2025-07-25 23:33:21] 2025-07-26 03:32:47,578 | INFO     | exitcode: 0
[2025-07-25 23:33:21] 2025-07-26 03:32:47,578 | INFO     | exitmsg: OK
[2025-07-25 23:33:21] 2025-07-26 03:32:47,578 | INFO     | cpuconsumptiontime: 23991 s
[2025-07-25 23:33:21] 2025-07-26 03:32:47,578 | INFO     | nevents: 400
[2025-07-25 23:33:21] 2025-07-26 03:32:47,578 | INFO     | neventsw: 0
[2025-07-25 23:33:21] 2025-07-26 03:32:47,578 | INFO     | pid: 2883916
[2025-07-25 23:33:21] 2025-07-26 03:32:47,578 | INFO     | pgrp: 2883916
[2025-07-25 23:33:21] 2025-07-26 03:32:47,578 | INFO     | corecount: 8
[2025-07-25 23:33:21] 2025-07-26 03:32:47,578 | INFO     | event service: False
[2025-07-25 23:33:21] 2025-07-26 03:32:47,579 | INFO     | sizes: {0: 2397254, 1: 2397453, 4: 2397715, 11: 2397743, 3260: 2423272, 3262: 2432456, 3269: 2432654}
[2025-07-25 23:33:21] 2025-07-26 03:32:47,579 | INFO     | --------------------------------------------------
[2025-07-25 23:33:21] 2025-07-26 03:32:47,579 | INFO     | 
[2025-07-25 23:33:21] 2025-07-26 03:32:47,579 | INFO     | executing command: ls -lF /tmp/boinchome/slots/12
[2025-07-25 23:33:21] 2025-07-26 03:32:47,597 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-25 23:33:21] 2025-07-26 03:32:47,597 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-25 23:33:21] 2025-07-26 03:32:47,597 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-25 23:33:21] 2025-07-26 03:32:47,597 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-25 23:33:21] 2025-07-26 03:32:47,597 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-25 23:33:21] 2025-07-26 03:32:47,597 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-25 23:33:21] 2025-07-26 03:32:47,598 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-25 23:33:21] 2025-07-26 03:32:47,598 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-25 23:33:21] 2025-07-26 03:32:47,598 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-25 23:33:21] 2025-07-26 03:32:47,598 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-25 23:33:21] 2025-07-26 03:32:47,598 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-25 23:33:21] 2025-07-26 03:32:47,598 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-25 23:33:21] 2025-07-26 03:32:47,598 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-25 23:33:21] 2025-07-26 03:32:47,598 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-25 23:33:21] 2025-07-26 03:32:47,598 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-25 23:33:21] 2025-07-26 03:32:47,598 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-25 23:33:21] 2025-07-26 03:32:47,598 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-25 23:33:21] 2025-07-26 03:32:47,598 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-25 23:33:21] 2025-07-26 03:32:47,598 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-25 23:33:21] 2025-07-26 03:32:47,598 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-25 23:33:21] 2025-07-26 03:32:47,599 | INFO     | job 6745061649 has completed (purged errors)
[2025-07-25 23:33:21] 2025-07-26 03:32:47,599 | INFO     | overall cleanup function is called
[2025-07-25 23:33:21] 2025-07-26 03:32:47,921 | INFO     | number of running child processes to parent process 2883916: 1
[2025-07-25 23:33:21] 2025-07-26 03:32:47,921 | INFO     | maximum number of monitored processes: 6
[2025-07-25 23:33:21] 2025-07-26 03:32:47,921 | INFO     | aborting job monitoring since job object (job id=6745061649) has expired
[2025-07-25 23:33:21] 2025-07-26 03:32:48,606 | INFO     | --- collectZombieJob: --- 10, [2883916]
[2025-07-25 23:33:21] 2025-07-26 03:32:48,606 | INFO     | zombie collector waiting for pid 2883916
[2025-07-25 23:33:21] 2025-07-26 03:32:48,607 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-25 23:33:21] 2025-07-26 03:32:48,607 | INFO     | collected zombie processes
[2025-07-25 23:33:21] 2025-07-26 03:32:48,607 | INFO     | will attempt to kill all subprocesses of pid=2883916
[2025-07-25 23:33:21] 2025-07-26 03:32:48,938 | INFO     | process IDs to be killed: [2883916] (in reverse order)
[2025-07-25 23:33:21] 2025-07-26 03:32:49,049 | WARNING  | found no corresponding commands to process id(s)
[2025-07-25 23:33:21] 2025-07-26 03:32:49,049 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-25 23:33:21] 2025-07-26 03:32:49,064 | INFO     | did not find any defunct processes belonging to 2883916
[2025-07-25 23:33:21] 2025-07-26 03:32:49,076 | INFO     | did not find any defunct processes belonging to 2883916
[2025-07-25 23:33:21] 2025-07-26 03:32:49,077 | INFO     | ready for new job
[2025-07-25 23:33:21] 2025-07-26 03:32:49,077 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-25 23:33:21] 2025-07-26 03:32:49,078 | INFO     | ***************************************
[2025-07-25 23:33:21] 2025-07-26 03:32:49,078 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-25 23:33:21] 2025-07-26 03:32:49,078 | INFO     | ***************************************
[2025-07-25 23:33:21] 2025-07-26 03:32:49,078 | INFO     | 
[2025-07-25 23:33:21] 2025-07-26 03:32:49,082 | INFO     | architecture information:
[2025-07-25 23:33:21] 2025-07-26 03:32:49,083 | INFO     | executing command: cat /etc/os-release
[2025-07-25 23:33:21] 2025-07-26 03:32:49,095 | INFO     | cat /etc/os-release:
[2025-07-25 23:33:21] NAME="CentOS Linux"
[2025-07-25 23:33:21] VERSION="7 (Core)"
[2025-07-25 23:33:21] ID="centos"
[2025-07-25 23:33:21] ID_LIKE="rhel fedora"
[2025-07-25 23:33:21] VERSION_ID="7"
[2025-07-25 23:33:21] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-25 23:33:21] ANSI_COLOR="0;31"
[2025-07-25 23:33:21] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-25 23:33:21] HOME_URL="https://www.centos.org/"
[2025-07-25 23:33:21] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-25 23:33:21] 
[2025-07-25 23:33:21] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-25 23:33:21] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-25 23:33:21] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-25 23:33:21] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-25 23:33:21] 
[2025-07-25 23:33:21] 2025-07-26 03:32:49,095 | INFO     | ***************************************
[2025-07-25 23:33:21] 2025-07-26 03:32:49,598 | INFO     | executing command: df -mP /tmp/boinchome/slots/12
[2025-07-25 23:33:21] 2025-07-26 03:32:49,613 | INFO     | sufficient remaining disk space (164931567616 B)
[2025-07-25 23:33:21] 2025-07-26 03:32:49,613 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-25 23:33:21] 2025-07-26 03:32:49,613 | INFO     | current server update state: UPDATING_FINAL
[2025-07-25 23:33:21] 2025-07-26 03:32:49,613 | INFO     | update_server=False
[2025-07-25 23:33:21] 2025-07-26 03:32:49,613 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-25 23:33:21] 2025-07-26 03:32:49,614 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-25 23:33:21] 2025-07-26 03:32:49,614 | INFO     | aborting loop
[2025-07-25 23:33:21] 2025-07-26 03:32:49,685 | INFO     | all job control threads have been joined
[2025-07-25 23:33:21] 2025-07-26 03:32:49,725 | INFO     | all data control threads have been joined
[2025-07-25 23:33:21] 2025-07-26 03:32:50,617 | INFO     | [job] job monitor thread has finished
[2025-07-25 23:33:21] 2025-07-26 03:32:50,619 | INFO     | [job] retrieve thread has finished
[2025-07-25 23:33:21] 2025-07-26 03:32:50,631 | INFO     | [payload] execute_payloads thread has finished
[2025-07-25 23:33:21] 2025-07-26 03:32:50,690 | INFO     | [job] control thread has finished
[2025-07-25 23:33:21] 2025-07-26 03:32:50,731 | INFO     | [data] control thread has finished
[2025-07-25 23:33:21] 2025-07-26 03:32:50,911 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-25 23:33:21] 2025-07-26 03:32:50,925 | INFO     | [job] validate thread has finished
[2025-07-25 23:33:21] 2025-07-26 03:32:51,015 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-25 23:33:21] 2025-07-26 03:32:51,075 | INFO     | [job] create_data_payload thread has finished
[2025-07-25 23:33:21] 2025-07-26 03:32:51,096 | INFO     | all payload control threads have been joined
[2025-07-25 23:33:21] 2025-07-26 03:32:51,286 | INFO     | [payload] validate_pre thread has finished
[2025-07-25 23:33:21] 2025-07-26 03:32:51,390 | INFO     | [payload] validate_post thread has finished
[2025-07-25 23:33:21] 2025-07-26 03:32:51,799 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-25 23:33:21] 2025-07-26 03:32:52,007 | INFO     | [data] copytool_in thread has finished
[2025-07-25 23:33:21] 2025-07-26 03:32:52,102 | INFO     | [payload] control thread has finished
[2025-07-25 23:33:21] 2025-07-26 03:32:52,190 | INFO     | [payload] failed_post thread has finished
[2025-07-25 23:33:21] 2025-07-26 03:32:52,588 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-25 23:33:21] 2025-07-26 03:32:53,021 | INFO     | [data] copytool_out thread has finished
[2025-07-25 23:33:21] 2025-07-26 03:32:53,594 | INFO     | [job] queue monitor thread has finished
[2025-07-25 23:33:21] 2025-07-26 03:32:55,804 | INFO     | [data] queue_monitor thread has finished
[2025-07-25 23:33:21] 2025-07-26 03:32:57,037 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140538473379648)>', '<ExcThread(monitor, started 140538191775488)>']
[2025-07-25 23:33:21] 2025-07-26 03:33:02,061 | INFO     | all workflow threads have been joined
[2025-07-25 23:33:21] 2025-07-26 03:33:02,062 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-25 23:33:21] 2025-07-26 03:33:02,062 | INFO     | traces error code: 0
[2025-07-25 23:33:21] 2025-07-26 03:33:02,062 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-25 23:33:21] 2025-07-26 03:33:20,837 | INFO     | PID=2877464 has CPU usage=5.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-25 23:33:21] 2025-07-26 03:33:20,837 | INFO     | .. there are 16 such processes running
[2025-07-25 23:33:21] 2025-07-26 03:33:20,837 | INFO     | found 0 job(s) in 20 queues
[2025-07-25 23:33:21] 2025-07-26 03:33:20,838 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-25 23:33:21] 2025-07-26 03:33:20,838 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-25 23:33:21] 2025-07-26 03:33:20,838 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-25 23:33:21] 2025-07-26 03:33:20,838 | INFO     | [monitor] control thread has ended
[2025-07-25 23:33:21] 2025-07-26 03:33:20,912 [wrapper] ==== pilot stdout END ====
[2025-07-25 23:33:21] 2025-07-26 03:33:20,915 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-25 23:33:21] 2025-07-26 03:33:20,917 [wrapper] pilotpid: 2877464
[2025-07-25 23:33:21] 2025-07-26 03:33:20,919 [wrapper] Pilot exit status: 0
[2025-07-25 23:33:21] 2025-07-26 03:33:20,928 [wrapper] pandaids: 6745061649
[2025-07-25 23:33:21] 2025-07-26 03:33:21,005 [wrapper] cleanup supervisor_pilot 3115346 2877465
[2025-07-25 23:33:21] 2025-07-26 03:33:21,008 [wrapper] Test setup, not cleaning
[2025-07-25 23:33:21] 2025-07-26 03:33:21,011 [wrapper] apfmon messages muted
[2025-07-25 23:33:21] 2025-07-26 03:33:21,013 [wrapper] ==== wrapper stdout END ====
[2025-07-25 23:33:21] 2025-07-26 03:33:21,016 [wrapper] ==== wrapper stderr END ====
[2025-07-25 23:33:21]  *** Error codes and diagnostics ***
[2025-07-25 23:33:21]     "exeErrorCode": 0,
[2025-07-25 23:33:21]     "exeErrorDiag": "",
[2025-07-25 23:33:21]     "pilotErrorCode": 0,
[2025-07-25 23:33:21]     "pilotErrorDiag": "",
[2025-07-25 23:33:21]  *** Listing of results directory ***
[2025-07-25 23:33:21] total 439404
[2025-07-25 23:33:21] -rw-r--r--. 1 boincer umatlas    530466 Jul 25 16:16 pilot3.tar.gz
[2025-07-25 23:33:21] -rw-r--r--. 1 boincer umatlas      5112 Jul 25 16:18 queuedata.json
[2025-07-25 23:33:21] -rwx------. 1 boincer umatlas     36292 Jul 25 16:20 runpilot2-wrapper.sh
[2025-07-25 23:33:21] -rw-r--r--. 1 boincer umatlas       100 Jul 25 22:37 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-25 23:33:21] -rwxr-xr-x. 1 boincer umatlas      7986 Jul 25 22:37 run_atlas
[2025-07-25 23:33:21] -rw-r--r--. 1 boincer umatlas       105 Jul 25 22:37 job.xml
[2025-07-25 23:33:21] -rw-r--r--. 2 boincer umatlas 232373505 Jul 25 22:37 EVNT.45743347._001480.pool.root.1
[2025-07-25 23:33:21] -rw-r--r--. 2 boincer umatlas     15095 Jul 25 22:37 start_atlas.sh
[2025-07-25 23:33:21] drwxrwx--x. 2 boincer umatlas      4096 Jul 25 22:37 shared
[2025-07-25 23:33:21] -rw-r--r--. 2 boincer umatlas    542893 Jul 25 22:37 input.tar.gz
[2025-07-25 23:33:21] -rw-r--r--. 1 boincer umatlas         0 Jul 25 22:37 boinc_lockfile
[2025-07-25 23:33:21] -rw-r--r--. 1 boincer umatlas      2562 Jul 25 22:37 pandaJob.out
[2025-07-25 23:33:21] -rw-------. 1 boincer umatlas    979977 Jul 25 22:38 agis_schedconf.cvmfs.json
[2025-07-25 23:33:21] -rw-------. 1 boincer umatlas   1593052 Jul 25 22:38 agis_ddmendpoints.agis.ALL.json
[2025-07-25 23:33:21] drwx------. 4 boincer umatlas      4096 Jul 25 22:38 pilot3
[2025-07-25 23:33:21] -rw-r--r--. 1 boincer umatlas      7174 Jul 25 23:28 init_data.xml
[2025-07-25 23:33:21] -rw-------. 1 boincer umatlas 212430719 Jul 25 23:32 HITS.45743349._026640.pool.root.1
[2025-07-25 23:33:21] -rw-r--r--. 1 boincer umatlas       529 Jul 25 23:32 boinc_task_state.xml
[2025-07-25 23:33:21] -rw-------. 1 boincer umatlas      1039 Jul 25 23:32 memory_monitor_summary.json
[2025-07-25 23:33:21] -rw-------. 1 boincer umatlas    293972 Jul 25 23:32 log.45743349._026640.job.log.tgz.1
[2025-07-25 23:33:21] -rw-------. 1 boincer umatlas      7766 Jul 25 23:32 heartbeat.json
[2025-07-25 23:33:21] -rw-r--r--. 1 boincer umatlas      8192 Jul 25 23:33 boinc_mmap_file
[2025-07-25 23:33:21] -rw-r--r--. 1 boincer umatlas        27 Jul 25 23:33 wrapper_checkpoint.txt
[2025-07-25 23:33:21] -rw-------. 1 boincer umatlas        95 Jul 25 23:33 pilot_heartbeat.json
[2025-07-25 23:33:21] -rw-------. 1 boincer umatlas       823 Jul 25 23:33 pilotlog.txt
[2025-07-25 23:33:21] -rw-------. 1 boincer umatlas    340053 Jul 25 23:33 log.45743349._026640.job.log.1
[2025-07-25 23:33:21] -rw-------. 1 boincer umatlas       357 Jul 25 23:33 output.list
[2025-07-25 23:33:21] -rw-r--r--. 1 boincer umatlas       620 Jul 25 23:33 runtime_log
[2025-07-25 23:33:21] -rw-------. 1 boincer umatlas    655360 Jul 25 23:33 result.tar.gz
[2025-07-25 23:33:21] -rw-------. 1 boincer umatlas       651 Jul 25 23:33 wWJODmZ5dz7n9Rq4apOajLDm4fhM0noT9bVof3QYDm6YzKDmUCbIlm.diag
[2025-07-25 23:33:21] -rw-r--r--. 1 boincer umatlas      8674 Jul 25 23:33 runtime_log.err
[2025-07-25 23:33:21] -rw-r--r--. 1 boincer umatlas     22515 Jul 25 23:33 stderr.txt
[2025-07-25 23:33:21] HITS file was successfully produced:
[2025-07-25 23:33:21] -rw-------. 1 boincer umatlas 212430719 Jul 25 23:32 shared/HITS.pool.root.1
[2025-07-25 23:33:21]  *** Contents of shared directory: ***
[2025-07-25 23:33:21] total 435576
[2025-07-25 23:33:21] -rw-r--r--. 2 boincer umatlas 232373505 Jul 25 22:37 ATLAS.root_0
[2025-07-25 23:33:21] -rw-r--r--. 2 boincer umatlas     15095 Jul 25 22:37 start_atlas.sh
[2025-07-25 23:33:21] -rw-r--r--. 2 boincer umatlas    542893 Jul 25 22:37 input.tar.gz
[2025-07-25 23:33:21] -rw-------. 1 boincer umatlas 212430719 Jul 25 23:32 HITS.pool.root.1
[2025-07-25 23:33:21] -rw-------. 1 boincer umatlas    655360 Jul 25 23:33 result.tar.gz
23:33:22 (2873817): run_atlas exited; CPU time 24073.474960
23:33:22 (2873817): called boinc_finish(0)

</stderr_txt>
]]>

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