Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
22:06:10 (2314789): wrapper (7.7.26015): starting
22:06:10 (2314789): wrapper: running run_atlas (--nthreads 10)
[2025-07-25 22:06:10] Arguments: --nthreads 10
[2025-07-25 22:06:10] Threads: 10
[2025-07-25 22:06:10] Checking for CVMFS
[2025-07-25 22:06:10] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-25 22:06:10] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-25 22:06:10] Running cvmfs_config stat atlas.cern.ch
[2025-07-25 22:06:11] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-25 22:06:11] 2.12.6.0 981271 16320 366788 148760 3 164 28791740 32935937 15561 16776704 0 50671142 99.764 75933344 24681 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-07-25 22:06:11] CVMFS is ok
[2025-07-25 22:06:11] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-25 22:06:11] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-25 22:06:11] Further information can be found at the LHC@home message board.
[2025-07-25 22:06:11] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-25 22:06:11] Checking for apptainer binary...
[2025-07-25 22:06:11] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-25 22:06:11] Running /usr/bin/apptainer --version
[2025-07-25 22:06:11] apptainer version 1.4.1-1.el9
[2025-07-25 22:06:11] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-25 22:06:11] c-4-36.aglt2.org
[2025-07-25 22:06:11] apptainer works
[2025-07-25 22:06:11] Set ATHENA_PROC_NUMBER=10
[2025-07-25 22:06:11] Set ATHENA_CORE_NUMBER=10
[2025-07-25 22:06:11] Starting ATLAS job with PandaID=6745061315
[2025-07-25 22:06:11] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-26 07:21:57]  *** The last 200 lines of the pilot log: ***
[2025-07-26 07:21:57] 2025-07-26 11:21:21,254 | INFO     | monitor loop #1788: job 0:6745061315 is in state 'finished'
[2025-07-26 07:21:57] 2025-07-26 11:21:21,254 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-26 07:21:57] 2025-07-26 11:21:21,966 | INFO     | PID=2325779 has CPU usage=2.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-26 07:21:57] 2025-07-26 11:21:21,966 | INFO     | .. there are 32 such processes running
[2025-07-26 07:21:57] 2025-07-26 11:21:22,801 | INFO     | CPU arch script returned: x86-64-v3
[2025-07-26 07:21:57] 2025-07-26 11:21:22,813 | INFO     | found 20 cores (10 cores per socket, 2 sockets) HT, CPU MHz: 2600.169599999999
[2025-07-26 07:21:57] 2025-07-26 11:21:22,835 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6745061315/memory_monitor_summary.json (trf name=prmon)
[2025-07-26 07:21:57] 2025-07-26 11:21:22,835 | INFO     | extracted standard info from prmon json
[2025-07-26 07:21:57] 2025-07-26 11:21:22,836 | INFO     | extracted standard memory fields from prmon json
[2025-07-26 07:21:57] 2025-07-26 11:21:22,836 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-26 07:21:57] 2025-07-26 11:21:22,840 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-26 07:21:57] 2025-07-26 11:21:22,840 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-26 07:21:57] 2025-07-26 11:21:22,859 | INFO     | fitting pss+swap vs Time
[2025-07-26 07:21:57] 2025-07-26 11:21:22,860 | INFO     | sum of square deviations: 49645936956.14741
[2025-07-26 07:21:57] 2025-07-26 11:21:22,875 | INFO     | sum of deviations: 86794108380.49179
[2025-07-26 07:21:57] 2025-07-26 11:21:22,875 | INFO     | mean x: 1753512279.5543277
[2025-07-26 07:21:57] 2025-07-26 11:21:22,876 | INFO     | mean y: 2211536.2375690606
[2025-07-26 07:21:57] 2025-07-26 11:21:22,876 | INFO     | -- intersect: -3063387466.8106766
[2025-07-26 07:21:57] 2025-07-26 11:21:22,876 | INFO     | intersect: -3063387466.8106766
[2025-07-26 07:21:57] 2025-07-26 11:21:22,877 | INFO     | chi2: 2.8967440743564152
[2025-07-26 07:21:57] 2025-07-26 11:21:22,878 | INFO     | sum of square deviations: 48287203282.09671
[2025-07-26 07:21:57] 2025-07-26 11:21:22,893 | INFO     | sum of deviations: 127012735343.52432
[2025-07-26 07:21:57] 2025-07-26 11:21:22,893 | INFO     | mean x: 1753512127.0594795
[2025-07-26 07:21:57] 2025-07-26 11:21:22,893 | INFO     | mean y: 2216025.5148698883
[2025-07-26 07:21:57] 2025-07-26 11:21:22,893 | INFO     | -- intersect: -4610152398.780323
[2025-07-26 07:21:57] 2025-07-26 11:21:22,893 | INFO     | intersect: -4610152398.780323
[2025-07-26 07:21:57] 2025-07-26 11:21:22,894 | INFO     | chi2: 2.1959128120844333
[2025-07-26 07:21:57] 2025-07-26 11:21:22,894 | INFO     | current chi2=2.1959128120844333 (change=24.19375838121596 %)
[2025-07-26 07:21:57] 2025-07-26 11:21:22,895 | INFO     | right removable region: 537
[2025-07-26 07:21:57] 2025-07-26 11:21:22,895 | INFO     | sum of square deviations: 48287019672.096725
[2025-07-26 07:21:57] 2025-07-26 11:21:22,934 | INFO     | sum of deviations: -7667580200.308556
[2025-07-26 07:21:57] 2025-07-26 11:21:22,934 | INFO     | mean x: 1753512432.0594795
[2025-07-26 07:21:57] 2025-07-26 11:21:22,934 | INFO     | mean y: 2222107.540892193
[2025-07-26 07:21:57] 2025-07-26 11:21:22,934 | INFO     | -- intersect: 280665409.619932
[2025-07-26 07:21:57] 2025-07-26 11:21:22,934 | INFO     | intersect: 280665409.619932
[2025-07-26 07:21:57] 2025-07-26 11:21:22,935 | INFO     | chi2: 1.1357091082208053
[2025-07-26 07:21:57] 2025-07-26 11:21:22,935 | INFO     | current chi2=1.1357091082208053 (change=60.79359863804565 %)
[2025-07-26 07:21:57] 2025-07-26 11:21:22,936 | INFO     | sum of square deviations: 46953159053.1443
[2025-07-26 07:21:57] 2025-07-26 11:21:22,964 | INFO     | sum of deviations: -22533746910.02997
[2025-07-26 07:21:57] 2025-07-26 11:21:22,964 | INFO     | mean x: 1753512584.5628517
[2025-07-26 07:21:57] 2025-07-26 11:21:22,964 | INFO     | mean y: 2223804.493433396
[2025-07-26 07:21:57] 2025-07-26 11:21:22,964 | INFO     | -- intersect: 843769071.7536935
[2025-07-26 07:21:57] 2025-07-26 11:21:22,964 | INFO     | intersect: 843769071.7536935
[2025-07-26 07:21:57] 2025-07-26 11:21:22,965 | INFO     | chi2: 1.097052849052367
[2025-07-26 07:21:57] 2025-07-26 11:21:22,965 | INFO     | current chi2=1.097052849052367 (change=3.403711292673961 %)
[2025-07-26 07:21:57] 2025-07-26 11:21:22,965 | INFO     | left removable region: 20
[2025-07-26 07:21:57] 2025-07-26 11:21:22,966 | INFO     | sum of square deviations: 42850530482.673
[2025-07-26 07:21:57] 2025-07-26 11:21:22,996 | INFO     | sum of deviations: -3993212488.2998285
[2025-07-26 07:21:57] 2025-07-26 11:21:22,996 | INFO     | mean x: 1753512706.5705996
[2025-07-26 07:21:57] 2025-07-26 11:21:22,996 | INFO     | mean y: 2231010.9671179885
[2025-07-26 07:21:57] 2025-07-26 11:21:22,996 | INFO     | -- intersect: 165639695.9798166
[2025-07-26 07:21:57] 2025-07-26 11:21:22,997 | INFO     | intersect: 165639695.9798166
[2025-07-26 07:21:57] 2025-07-26 11:21:22,997 | INFO     | chi2: 0.35199940685966685
[2025-07-26 07:21:57] 2025-07-26 11:21:23,003 | INFO     | -- intersect: 165639695.9798166
[2025-07-26 07:21:57] 2025-07-26 11:21:23,003 | INFO     | current memory leak: -0.09 B/s (using 517 data points, chi2=0.35)
[2025-07-26 07:21:57] 2025-07-26 11:21:23,004 | INFO     | could have reported an average CPU frequency of 2601 MHz (21 samples)
[2025-07-26 07:21:57] 2025-07-26 11:21:23,004 | INFO     | ..............................
[2025-07-26 07:21:57] 2025-07-26 11:21:23,004 | INFO     | . Timing measurements:
[2025-07-26 07:21:57] 2025-07-26 11:21:23,004 | INFO     | . get job = 0 s
[2025-07-26 07:21:57] 2025-07-26 11:21:23,004 | INFO     | . initial setup = 4 s
[2025-07-26 07:21:57] 2025-07-26 11:21:23,004 | INFO     | . payload setup = 36 s
[2025-07-26 07:21:57] 2025-07-26 11:21:23,004 | INFO     | . stage-in = 0 s
[2025-07-26 07:21:57] 2025-07-26 11:21:23,004 | INFO     | . payload execution = 33120 s
[2025-07-26 07:21:57] 2025-07-26 11:21:23,004 | INFO     | . stage-out = 6 s
[2025-07-26 07:21:57] 2025-07-26 11:21:23,005 | INFO     | . log creation = 0 s
[2025-07-26 07:21:57] 2025-07-26 11:21:23,005 | INFO     | ..............................
[2025-07-26 07:21:57] 2025-07-26 11:21:23,515 | INFO     | 
[2025-07-26 07:21:57] 2025-07-26 11:21:23,515 | INFO     | job summary report
[2025-07-26 07:21:57] 2025-07-26 11:21:23,515 | INFO     | --------------------------------------------------
[2025-07-26 07:21:57] 2025-07-26 11:21:23,515 | INFO     | PanDA job id: 6745061315
[2025-07-26 07:21:57] 2025-07-26 11:21:23,515 | INFO     | task id: 45743349
[2025-07-26 07:21:57] 2025-07-26 11:21:23,515 | INFO     | errors: (none)
[2025-07-26 07:21:57] 2025-07-26 11:21:23,515 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-26 07:21:57] 2025-07-26 11:21:23,516 | INFO     | pilot state: finished 
[2025-07-26 07:21:57] 2025-07-26 11:21:23,516 | INFO     | transexitcode: 0
[2025-07-26 07:21:57] 2025-07-26 11:21:23,516 | INFO     | exeerrorcode: 0
[2025-07-26 07:21:57] 2025-07-26 11:21:23,516 | INFO     | exeerrordiag: 
[2025-07-26 07:21:57] 2025-07-26 11:21:23,516 | INFO     | exitcode: 0
[2025-07-26 07:21:57] 2025-07-26 11:21:23,516 | INFO     | exitmsg: OK
[2025-07-26 07:21:57] 2025-07-26 11:21:23,516 | INFO     | cpuconsumptiontime: 59115 s
[2025-07-26 07:21:57] 2025-07-26 11:21:23,516 | INFO     | nevents: 400
[2025-07-26 07:21:57] 2025-07-26 11:21:23,516 | INFO     | neventsw: 0
[2025-07-26 07:21:57] 2025-07-26 11:21:23,516 | INFO     | pid: 2345745
[2025-07-26 07:21:57] 2025-07-26 11:21:23,517 | INFO     | pgrp: 2345745
[2025-07-26 07:21:57] 2025-07-26 11:21:23,517 | INFO     | corecount: 10
[2025-07-26 07:21:57] 2025-07-26 11:21:23,517 | INFO     | event service: False
[2025-07-26 07:21:57] 2025-07-26 11:21:23,517 | INFO     | sizes: {0: 2397301, 1: 2397329, 2: 2397500, 13: 2397528, 23: 2397584, 30: 2397874, 35: 2398030, 33160: 2436831, 33161: 2436830, 33168: 2445940, 33201: 2446078}
[2025-07-26 07:21:57] 2025-07-26 11:21:23,517 | INFO     | --------------------------------------------------
[2025-07-26 07:21:57] 2025-07-26 11:21:23,517 | INFO     | 
[2025-07-26 07:21:57] 2025-07-26 11:21:23,517 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-07-26 07:21:57] 2025-07-26 11:21:23,730 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-26 07:21:57] 2025-07-26 11:21:23,730 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-26 07:21:57] 2025-07-26 11:21:23,731 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-26 07:21:57] 2025-07-26 11:21:23,731 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-26 07:21:57] 2025-07-26 11:21:23,731 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-26 07:21:57] 2025-07-26 11:21:23,731 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-26 07:21:57] 2025-07-26 11:21:23,731 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-26 07:21:57] 2025-07-26 11:21:23,731 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-26 07:21:57] 2025-07-26 11:21:23,731 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-26 07:21:57] 2025-07-26 11:21:23,731 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-26 07:21:57] 2025-07-26 11:21:23,732 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-26 07:21:57] 2025-07-26 11:21:23,732 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-26 07:21:57] 2025-07-26 11:21:23,732 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-26 07:21:57] 2025-07-26 11:21:23,732 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-26 07:21:57] 2025-07-26 11:21:23,732 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-26 07:21:57] 2025-07-26 11:21:23,732 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-26 07:21:57] 2025-07-26 11:21:23,732 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-26 07:21:57] 2025-07-26 11:21:23,732 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-26 07:21:57] 2025-07-26 11:21:23,732 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-26 07:21:57] 2025-07-26 11:21:23,733 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-26 07:21:57] 2025-07-26 11:21:23,733 | INFO     | job 6745061315 has completed (purged errors)
[2025-07-26 07:21:57] 2025-07-26 11:21:23,733 | INFO     | overall cleanup function is called
[2025-07-26 07:21:57] 2025-07-26 11:21:24,752 | INFO     | --- collectZombieJob: --- 10, [2345745]
[2025-07-26 07:21:57] 2025-07-26 11:21:24,752 | INFO     | zombie collector waiting for pid 2345745
[2025-07-26 07:21:57] 2025-07-26 11:21:24,752 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-26 07:21:57] 2025-07-26 11:21:24,752 | INFO     | collected zombie processes
[2025-07-26 07:21:57] 2025-07-26 11:21:24,752 | INFO     | will attempt to kill all subprocesses of pid=2345745
[2025-07-26 07:21:57] 2025-07-26 11:21:25,838 | INFO     | process IDs to be killed: [2345745] (in reverse order)
[2025-07-26 07:21:57] 2025-07-26 11:21:26,273 | WARNING  | found no corresponding commands to process id(s)
[2025-07-26 07:21:57] 2025-07-26 11:21:26,274 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-26 07:21:57] 2025-07-26 11:21:26,317 | INFO     | did not find any defunct processes belonging to 2345745
[2025-07-26 07:21:57] 2025-07-26 11:21:26,345 | INFO     | did not find any defunct processes belonging to 2345745
[2025-07-26 07:21:57] 2025-07-26 11:21:26,345 | INFO     | ready for new job
[2025-07-26 07:21:57] 2025-07-26 11:21:26,345 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-26 07:21:57] 2025-07-26 11:21:26,353 | INFO     | ***************************************
[2025-07-26 07:21:57] 2025-07-26 11:21:26,353 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-26 07:21:57] 2025-07-26 11:21:26,353 | INFO     | ***************************************
[2025-07-26 07:21:57] 2025-07-26 11:21:26,353 | INFO     | 
[2025-07-26 07:21:57] 2025-07-26 11:21:26,370 | INFO     | architecture information:
[2025-07-26 07:21:57] 2025-07-26 11:21:26,378 | INFO     | executing command: cat /etc/os-release
[2025-07-26 07:21:57] 2025-07-26 11:21:26,473 | INFO     | cat /etc/os-release:
[2025-07-26 07:21:57] NAME="CentOS Linux"
[2025-07-26 07:21:57] VERSION="7 (Core)"
[2025-07-26 07:21:57] ID="centos"
[2025-07-26 07:21:57] ID_LIKE="rhel fedora"
[2025-07-26 07:21:57] VERSION_ID="7"
[2025-07-26 07:21:57] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-26 07:21:57] ANSI_COLOR="0;31"
[2025-07-26 07:21:57] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-26 07:21:57] HOME_URL="https://www.centos.org/"
[2025-07-26 07:21:57] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-26 07:21:57] 
[2025-07-26 07:21:57] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-26 07:21:57] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-26 07:21:57] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-26 07:21:57] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-26 07:21:57] 
[2025-07-26 07:21:57] 2025-07-26 11:21:26,473 | INFO     | ***************************************
[2025-07-26 07:21:57] 2025-07-26 11:21:26,977 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-07-26 07:21:57] 2025-07-26 11:21:27,095 | INFO     | sufficient remaining disk space (76510396416 B)
[2025-07-26 07:21:57] 2025-07-26 11:21:27,095 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-26 07:21:57] 2025-07-26 11:21:27,096 | INFO     | current server update state: UPDATING_FINAL
[2025-07-26 07:21:57] 2025-07-26 11:21:27,096 | INFO     | update_server=False
[2025-07-26 07:21:57] 2025-07-26 11:21:27,096 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-26 07:21:57] 2025-07-26 11:21:27,198 | INFO     | all payload control threads have been joined
[2025-07-26 07:21:57] 2025-07-26 11:21:27,315 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-26 07:21:57] 2025-07-26 11:21:27,315 | INFO     | aborting loop
[2025-07-26 07:21:57] 2025-07-26 11:21:27,723 | INFO     | all data control threads have been joined
[2025-07-26 07:21:57] 2025-07-26 11:21:27,771 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-26 07:21:57] 2025-07-26 11:21:28,084 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-26 07:21:57] 2025-07-26 11:21:28,102 | INFO     | [job] retrieve thread has finished
[2025-07-26 07:21:57] 2025-07-26 11:21:28,149 | INFO     | all job control threads have been joined
[2025-07-26 07:21:57] 2025-07-26 11:21:28,211 | INFO     | [payload] control thread has finished
[2025-07-26 07:21:57] 2025-07-26 11:21:28,326 | INFO     | [job] job monitor thread has finished
[2025-07-26 07:21:57] 2025-07-26 11:21:28,567 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-26 07:21:57] 2025-07-26 11:21:28,582 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-26 07:21:57] 2025-07-26 11:21:28,664 | INFO     | [payload] failed_post thread has finished
[2025-07-26 07:21:57] 2025-07-26 11:21:28,729 | INFO     | [data] control thread has finished
[2025-07-26 07:21:57] 2025-07-26 11:21:28,919 | INFO     | [job] create_data_payload thread has finished
[2025-07-26 07:21:57] 2025-07-26 11:21:28,931 | INFO     | [data] copytool_in thread has finished
[2025-07-26 07:21:57] 2025-07-26 11:21:29,074 | INFO     | [payload] execute_payloads thread has finished
[2025-07-26 07:21:57] 2025-07-26 11:21:29,114 | INFO     | [payload] validate_post thread has finished
[2025-07-26 07:21:57] 2025-07-26 11:21:29,155 | INFO     | [job] control thread has finished
[2025-07-26 07:21:57] 2025-07-26 11:21:29,191 | INFO     | [payload] validate_pre thread has finished
[2025-07-26 07:21:57] 2025-07-26 11:21:29,553 | INFO     | [job] validate thread has finished
[2025-07-26 07:21:57] 2025-07-26 11:21:29,573 | INFO     | [job] queue monitor thread has finished
[2025-07-26 07:21:57] 2025-07-26 11:21:30,091 | INFO     | [data] copytool_out thread has finished
[2025-07-26 07:21:57] 2025-07-26 11:21:31,783 | INFO     | [data] queue_monitor thread has finished
[2025-07-26 07:21:57] 2025-07-26 11:21:33,646 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139696344229696)>', '<ExcThread(monitor, started 139695992321792)>']
[2025-07-26 07:21:57] 2025-07-26 11:21:38,675 | INFO     | all workflow threads have been joined
[2025-07-26 07:21:57] 2025-07-26 11:21:38,675 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-26 07:21:57] 2025-07-26 11:21:38,675 | INFO     | traces error code: 0
[2025-07-26 07:21:57] 2025-07-26 11:21:38,676 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-26 07:21:57] 2025-07-26 11:21:57,059 | INFO     | PID=2325779 has CPU usage=3.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-26 07:21:57] 2025-07-26 11:21:57,060 | INFO     | .. there are 32 such processes running
[2025-07-26 07:21:57] 2025-07-26 11:21:57,060 | INFO     | found 0 job(s) in 20 queues
[2025-07-26 07:21:57] 2025-07-26 11:21:57,060 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-26 07:21:57] 2025-07-26 11:21:57,060 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-26 07:21:57] 2025-07-26 11:21:57,060 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-26 07:21:57] 2025-07-26 11:21:57,061 | INFO     | [monitor] control thread has ended
[2025-07-26 07:21:57] 2025-07-26 11:21:57,225 [wrapper] ==== pilot stdout END ====
[2025-07-26 07:21:57] 2025-07-26 11:21:57,228 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-26 07:21:57] 2025-07-26 11:21:57,231 [wrapper] pilotpid: 2325779
[2025-07-26 07:21:57] 2025-07-26 11:21:57,235 [wrapper] Pilot exit status: 0
[2025-07-26 07:21:57] 2025-07-26 11:21:57,258 [wrapper] pandaids: 6745061315
[2025-07-26 07:21:57] 2025-07-26 11:21:57,364 [wrapper] cleanup supervisor_pilot 3938617 2325780
[2025-07-26 07:21:57] 2025-07-26 11:21:57,367 [wrapper] Test setup, not cleaning
[2025-07-26 07:21:57] 2025-07-26 11:21:57,381 [wrapper] apfmon messages muted
[2025-07-26 07:21:57] 2025-07-26 11:21:57,386 [wrapper] ==== wrapper stdout END ====
[2025-07-26 07:21:57] 2025-07-26 11:21:57,389 [wrapper] ==== wrapper stderr END ====
[2025-07-26 07:21:57]  *** Error codes and diagnostics ***
[2025-07-26 07:21:57]     "exeErrorCode": 0,
[2025-07-26 07:21:57]     "exeErrorDiag": "",
[2025-07-26 07:21:57]     "pilotErrorCode": 0,
[2025-07-26 07:21:57]     "pilotErrorDiag": "",
[2025-07-26 07:21:57]  *** Listing of results directory ***
[2025-07-26 07:21:57] total 443788
[2025-07-26 07:21:57] -rw-r--r--. 1 boincer umatlas    530466 Jul 25 15:17 pilot3.tar.gz
[2025-07-26 07:21:57] -rw-r--r--. 1 boincer umatlas      5112 Jul 25 16:06 queuedata.json
[2025-07-26 07:21:57] -rwx------. 1 boincer umatlas     36292 Jul 25 16:06 runpilot2-wrapper.sh
[2025-07-26 07:21:57] -rw-r--r--. 1 boincer umatlas       100 Jul 25 22:06 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-26 07:21:57] -rwxr-xr-x. 1 boincer umatlas      7986 Jul 25 22:06 run_atlas
[2025-07-26 07:21:57] -rw-r--r--. 1 boincer umatlas       105 Jul 25 22:06 job.xml
[2025-07-26 07:21:57] -rw-r--r--. 2 boincer umatlas 233120362 Jul 25 22:06 EVNT.45743347._001473.pool.root.1
[2025-07-26 07:21:57] -rw-r--r--. 2 boincer umatlas     15095 Jul 25 22:06 start_atlas.sh
[2025-07-26 07:21:57] drwxrwx--x. 2 boincer umatlas      4096 Jul 25 22:06 shared
[2025-07-26 07:21:57] -rw-r--r--. 2 boincer umatlas    542899 Jul 25 22:06 input.tar.gz
[2025-07-26 07:21:57] -rw-r--r--. 1 boincer umatlas         0 Jul 25 22:06 boinc_lockfile
[2025-07-26 07:21:57] -rw-r--r--. 1 boincer umatlas      2561 Jul 25 22:06 pandaJob.out
[2025-07-26 07:21:57] -rw-------. 1 boincer umatlas    979985 Jul 25 22:07 agis_schedconf.cvmfs.json
[2025-07-26 07:21:57] drwx------. 4 boincer umatlas      4096 Jul 25 22:07 pilot3
[2025-07-26 07:21:57] -rw-------. 1 boincer umatlas 211437058 Jul 26 07:19 HITS.45743349._026453.pool.root.1
[2025-07-26 07:21:57] -rw-r--r--. 1 boincer umatlas       531 Jul 26 07:19 boinc_task_state.xml
[2025-07-26 07:21:57] -rw-------. 1 boincer umatlas      1049 Jul 26 07:20 memory_monitor_summary.json
[2025-07-26 07:21:57] -rw-------. 1 boincer umatlas   1593052 Jul 26 07:20 agis_ddmendpoints.agis.ALL.json
[2025-07-26 07:21:57] -rw-------. 1 boincer umatlas    556954 Jul 26 07:20 log.45743349._026453.job.log.tgz.1
[2025-07-26 07:21:57] -rw-r--r--. 1 boincer umatlas      6660 Jul 26 07:20 init_data.xml
[2025-07-26 07:21:57] -rw-------. 1 boincer umatlas        95 Jul 26 07:21 pilot_heartbeat.json
[2025-07-26 07:21:57] -rw-------. 1 boincer umatlas      7829 Jul 26 07:21 heartbeat.json
[2025-07-26 07:21:57] -rw-r--r--. 1 boincer umatlas      8192 Jul 26 07:21 boinc_mmap_file
[2025-07-26 07:21:57] -rw-r--r--. 1 boincer umatlas        28 Jul 26 07:21 wrapper_checkpoint.txt
[2025-07-26 07:21:57] -rw-------. 1 boincer umatlas       823 Jul 26 07:21 pilotlog.txt
[2025-07-26 07:21:57] -rw-------. 1 boincer umatlas   2448763 Jul 26 07:21 log.45743349._026453.job.log.1
[2025-07-26 07:21:57] -rw-------. 1 boincer umatlas       357 Jul 26 07:21 output.list
[2025-07-26 07:21:57] -rw-r--r--. 1 boincer umatlas       620 Jul 26 07:21 runtime_log
[2025-07-26 07:21:57] -rw-------. 1 boincer umatlas   3020800 Jul 26 07:21 result.tar.gz
[2025-07-26 07:21:57] -rw-r--r--. 1 boincer umatlas      8653 Jul 26 07:21 runtime_log.err
[2025-07-26 07:21:57] -rw-------. 1 boincer umatlas       656 Jul 26 07:21 HrbMDmxrdz7n9Rq4apOajLDm4fhM0noT9bVof3QYDmZYzKDmIMhHHm.diag
[2025-07-26 07:21:57] -rw-r--r--. 1 boincer umatlas     21350 Jul 26 07:21 stderr.txt
[2025-07-26 07:21:57] HITS file was successfully produced:
[2025-07-26 07:21:57] -rw-------. 1 boincer umatlas 211437058 Jul 26 07:19 shared/HITS.pool.root.1
[2025-07-26 07:21:57]  *** Contents of shared directory: ***
[2025-07-26 07:21:57] total 437648
[2025-07-26 07:21:57] -rw-r--r--. 2 boincer umatlas 233120362 Jul 25 22:06 ATLAS.root_0
[2025-07-26 07:21:57] -rw-r--r--. 2 boincer umatlas     15095 Jul 25 22:06 start_atlas.sh
[2025-07-26 07:21:57] -rw-r--r--. 2 boincer umatlas    542899 Jul 25 22:06 input.tar.gz
[2025-07-26 07:21:57] -rw-------. 1 boincer umatlas 211437058 Jul 26 07:19 HITS.pool.root.1
[2025-07-26 07:21:57] -rw-------. 1 boincer umatlas   3020800 Jul 26 07:21 result.tar.gz
07:21:59 (2314789): run_atlas exited; CPU time 60437.278502
07:21:59 (2314789): called boinc_finish(0)

</stderr_txt>
]]>

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