Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
14:26:41 (26506): wrapper (7.7.26015): starting
14:26:41 (26506): wrapper: running run_atlas (--nthreads 8)
[2025-07-26 14:26:41] Arguments: --nthreads 8
[2025-07-26 14:26:41] Threads: 8
[2025-07-26 14:26:41] Checking for CVMFS
[2025-07-26 14:26:43] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-26 14:26:45] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-26 14:26:45] Running cvmfs_config stat atlas.cern.ch
[2025-07-26 14:26:56] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-26 14:26:56] 2.11.2.0 26884 108102 139476 148777 1 109 18352322 25165825 4353 130560 0 78423504 99.873 52322917 3332 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-07-26 14:26:56] CVMFS is ok
[2025-07-26 14:26:56] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-26 14:26:56] Checking for apptainer binary...
[2025-07-26 14:26:56] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-26 14:26:56] Running /usr/bin/apptainer --version
[2025-07-26 14:26:56] apptainer version 1.3.2-1.el7
[2025-07-26 14:26:56] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-26 14:26:58] cg-vwn403.simple-grid.lan
[2025-07-26 14:26:58] apptainer works
[2025-07-26 14:26:58] Set ATHENA_PROC_NUMBER=8
[2025-07-26 14:26:58] Set ATHENA_CORE_NUMBER=8
[2025-07-26 14:26:58] Starting ATLAS job with PandaID=6745061274
[2025-07-26 14:26:58] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/9 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-26 20:23:00]  *** The last 200 lines of the pilot log: ***
[2025-07-26 20:23:00] 2025-07-26 16:59:56,978 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-26 20:23:00] 2025-07-26 16:59:56,978 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-26 20:23:00] 2025-07-26 16:59:56,984 | INFO     | fitting pss+swap vs Time
[2025-07-26 20:23:00] 2025-07-26 16:59:56,985 | INFO     | sum of square deviations: 5836025702.5
[2025-07-26 20:23:00] 2025-07-26 16:59:56,987 | INFO     | sum of deviations: -32941684240.499992
[2025-07-26 20:23:00] 2025-07-26 16:59:56,988 | INFO     | mean x: 1753540976.5
[2025-07-26 20:23:00] 2025-07-26 16:59:56,988 | INFO     | mean y: 2519246.537593985
[2025-07-26 20:23:00] 2025-07-26 16:59:56,988 | INFO     | -- intersect: 9900452548.287136
[2025-07-26 20:23:00] 2025-07-26 16:59:56,988 | INFO     | intersect: 9900452548.287136
[2025-07-26 20:23:00] 2025-07-26 16:59:56,989 | INFO     | chi2: 2.595961451261374
[2025-07-26 20:23:00] 2025-07-26 16:59:56,989 | INFO     | sum of square deviations: 5513070810.0
[2025-07-26 20:23:00] 2025-07-26 16:59:57,000 | INFO     | sum of deviations: -14683578277.999998
[2025-07-26 20:23:00] 2025-07-26 16:59:57,000 | INFO     | mean x: 1753540824.0
[2025-07-26 20:23:00] 2025-07-26 16:59:57,000 | INFO     | mean y: 2527740.827586207
[2025-07-26 20:23:00] 2025-07-26 16:59:57,001 | INFO     | -- intersect: 4672929199.515293
[2025-07-26 20:23:00] 2025-07-26 16:59:57,001 | INFO     | intersect: 4672929199.515293
[2025-07-26 20:23:00] 2025-07-26 16:59:57,001 | INFO     | chi2: 1.8300021980010615
[2025-07-26 20:23:00] 2025-07-26 16:59:57,001 | INFO     | current chi2=1.8300021980010615 (change=29.505802287169324 %)
[2025-07-26 20:23:00] 2025-07-26 16:59:57,002 | INFO     | sum of square deviations: 5202255680.0
[2025-07-26 20:23:00] 2025-07-26 16:59:57,004 | INFO     | sum of deviations: -14410989621.5
[2025-07-26 20:23:00] 2025-07-26 16:59:57,004 | INFO     | mean x: 1753540671.5
[2025-07-26 20:23:00] 2025-07-26 16:59:57,005 | INFO     | mean y: 2527874.59765625
[2025-07-26 20:23:00] 2025-07-26 16:59:57,005 | INFO     | -- intersect: 4860085436.602114
[2025-07-26 20:23:00] 2025-07-26 16:59:57,005 | INFO     | intersect: 4860085436.602114
[2025-07-26 20:23:00] 2025-07-26 16:59:57,005 | INFO     | chi2: 1.829096608654089
[2025-07-26 20:23:00] 2025-07-26 16:59:57,005 | INFO     | current chi2=1.829096608654089 (change=0.049485697228215324 %)
[2025-07-26 20:23:00] 2025-07-26 16:59:57,006 | INFO     | right removable region: 255
[2025-07-26 20:23:00] 2025-07-26 16:59:57,006 | INFO     | sum of square deviations: 5513070810.0
[2025-07-26 20:23:00] 2025-07-26 16:59:57,009 | INFO     | sum of deviations: -77185136588.00002
[2025-07-26 20:23:00] 2025-07-26 16:59:57,009 | INFO     | mean x: 1753541129.0
[2025-07-26 20:23:00] 2025-07-26 16:59:57,009 | INFO     | mean y: 2539980.0038314178
[2025-07-26 20:23:00] 2025-07-26 16:59:57,009 | INFO     | -- intersect: 24552798124.52796
[2025-07-26 20:23:00] 2025-07-26 16:59:57,009 | INFO     | intersect: 24552798124.52796
[2025-07-26 20:23:00] 2025-07-26 16:59:57,010 | INFO     | chi2: 1.0452602167535767
[2025-07-26 20:23:00] 2025-07-26 16:59:57,010 | INFO     | current chi2=1.0452602167535767 (change=59.735141049737614 %)
[2025-07-26 20:23:00] 2025-07-26 16:59:57,010 | INFO     | sum of square deviations: 5202255680.0
[2025-07-26 20:23:00] 2025-07-26 16:59:57,013 | INFO     | sum of deviations: -77709336550.0
[2025-07-26 20:23:00] 2025-07-26 16:59:57,013 | INFO     | mean x: 1753541281.5
[2025-07-26 20:23:00] 2025-07-26 16:59:57,013 | INFO     | mean y: 2540212.484375
[2025-07-26 20:23:00] 2025-07-26 16:59:57,013 | INFO     | -- intersect: 26196279617.157734
[2025-07-26 20:23:00] 2025-07-26 16:59:57,013 | INFO     | intersect: 26196279617.157734
[2025-07-26 20:23:00] 2025-07-26 16:59:57,014 | INFO     | chi2: 1.0237044031235394
[2025-07-26 20:23:00] 2025-07-26 16:59:57,014 | INFO     | current chi2=1.0237044031235394 (change=2.062243763279014 %)
[2025-07-26 20:23:00] 2025-07-26 16:59:57,014 | INFO     | left removable region: 20
[2025-07-26 20:23:00] 2025-07-26 16:59:57,015 | INFO     | sum of square deviations: 4024149870.0
[2025-07-26 20:23:00] 2025-07-26 16:59:57,025 | INFO     | sum of deviations: -44279546687.99999
[2025-07-26 20:23:00] 2025-07-26 16:59:57,025 | INFO     | mean x: 1753541251.0
[2025-07-26 20:23:00] 2025-07-26 16:59:57,025 | INFO     | mean y: 2542338.3787234044
[2025-07-26 20:23:00] 2025-07-26 16:59:57,025 | INFO     | -- intersect: 19297552266.273983
[2025-07-26 20:23:00] 2025-07-26 16:59:57,026 | INFO     | intersect: 19297552266.273983
[2025-07-26 20:23:00] 2025-07-26 16:59:57,026 | INFO     | chi2: 0.21841655808695623
[2025-07-26 20:23:00] 2025-07-26 16:59:57,026 | INFO     | -- intersect: 19297552266.273983
[2025-07-26 20:23:00] 2025-07-26 16:59:57,026 | INFO     | current memory leak: -11.00 B/s (using 235 data points, chi2=0.22)
[2025-07-26 20:23:00] 2025-07-26 16:59:57,027 | INFO     | could have reported an average CPU frequency of 1999 MHz (12 samples)
[2025-07-26 20:23:00] 2025-07-26 16:59:57,027 | INFO     | ..............................
[2025-07-26 20:23:00] 2025-07-26 16:59:57,028 | INFO     | . Timing measurements:
[2025-07-26 20:23:00] 2025-07-26 16:59:57,028 | INFO     | . get job = 0 s
[2025-07-26 20:23:00] 2025-07-26 16:59:57,028 | INFO     | . initial setup = 2 s
[2025-07-26 20:23:00] 2025-07-26 16:59:57,028 | INFO     | . payload setup = 13 s
[2025-07-26 20:23:00] 2025-07-26 16:59:57,028 | INFO     | . stage-in = 0 s
[2025-07-26 20:23:00] 2025-07-26 16:59:57,028 | INFO     | . payload execution = 16225 s
[2025-07-26 20:23:00] 2025-07-26 16:59:57,028 | INFO     | . stage-out = 3 s
[2025-07-26 20:23:00] 2025-07-26 16:59:57,028 | INFO     | . log creation = 0 s
[2025-07-26 20:23:00] 2025-07-26 16:59:57,028 | INFO     | ..............................
[2025-07-26 20:23:00] 2025-07-26 16:59:57,382 | INFO     | 
[2025-07-26 20:23:00] 2025-07-26 16:59:57,382 | INFO     | job summary report
[2025-07-26 20:23:00] 2025-07-26 16:59:57,382 | INFO     | --------------------------------------------------
[2025-07-26 20:23:00] 2025-07-26 16:59:57,382 | INFO     | PanDA job id: 6745061274
[2025-07-26 20:23:00] 2025-07-26 16:59:57,382 | INFO     | task id: 45743349
[2025-07-26 20:23:00] 2025-07-26 16:59:57,382 | INFO     | errors: (none)
[2025-07-26 20:23:00] 2025-07-26 16:59:57,382 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-26 20:23:00] 2025-07-26 16:59:57,382 | INFO     | pilot state: finished 
[2025-07-26 20:23:00] 2025-07-26 16:59:57,383 | INFO     | transexitcode: 0
[2025-07-26 20:23:00] 2025-07-26 16:59:57,383 | INFO     | exeerrorcode: 0
[2025-07-26 20:23:00] 2025-07-26 16:59:57,383 | INFO     | exeerrordiag: 
[2025-07-26 20:23:00] 2025-07-26 16:59:57,383 | INFO     | exitcode: 0
[2025-07-26 20:23:00] 2025-07-26 16:59:57,383 | INFO     | exitmsg: OK
[2025-07-26 20:23:00] 2025-07-26 16:59:57,383 | INFO     | cpuconsumptiontime: 63149 s
[2025-07-26 20:23:00] 2025-07-26 16:59:57,383 | INFO     | nevents: 400
[2025-07-26 20:23:00] 2025-07-26 16:59:57,383 | INFO     | neventsw: 0
[2025-07-26 20:23:00] 2025-07-26 16:59:57,383 | INFO     | pid: 4681
[2025-07-26 20:23:00] 2025-07-26 16:59:57,383 | INFO     | pgrp: 4681
[2025-07-26 20:23:00] 2025-07-26 16:59:57,383 | INFO     | corecount: 8
[2025-07-26 20:23:00] 2025-07-26 16:59:57,384 | INFO     | event service: False
[2025-07-26 20:23:00] 2025-07-26 16:59:57,384 | INFO     | sizes: {0: 2397475, 1: 2397475, 9: 2397765, 12: 2397793, 16242: 2428906, 16243: 2428905, 16246: 2438143, 16338: 2438281}
[2025-07-26 20:23:00] 2025-07-26 16:59:57,384 | INFO     | --------------------------------------------------
[2025-07-26 20:23:00] 2025-07-26 16:59:57,384 | INFO     | 
[2025-07-26 20:23:00] 2025-07-26 16:59:57,384 | INFO     | executing command: ls -lF /var/lib/boinc/slots/9
[2025-07-26 20:23:00] 2025-07-26 16:59:57,760 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-26 20:23:00] 2025-07-26 16:59:57,760 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-26 20:23:00] 2025-07-26 16:59:57,760 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-26 20:23:00] 2025-07-26 16:59:57,760 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-26 20:23:00] 2025-07-26 16:59:57,760 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-26 20:23:00] 2025-07-26 16:59:57,760 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-26 20:23:00] 2025-07-26 16:59:57,761 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-26 20:23:00] 2025-07-26 16:59:57,761 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-26 20:23:00] 2025-07-26 16:59:57,761 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-26 20:23:00] 2025-07-26 16:59:57,761 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-26 20:23:00] 2025-07-26 16:59:57,761 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-26 20:23:00] 2025-07-26 16:59:57,761 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-26 20:23:00] 2025-07-26 16:59:57,761 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-26 20:23:00] 2025-07-26 16:59:57,761 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-26 20:23:00] 2025-07-26 16:59:57,761 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-26 20:23:00] 2025-07-26 16:59:57,761 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-26 20:23:00] 2025-07-26 16:59:57,761 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-26 20:23:00] 2025-07-26 16:59:57,761 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-26 20:23:00] 2025-07-26 16:59:57,762 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-26 20:23:00] 2025-07-26 16:59:57,762 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-26 20:23:00] 2025-07-26 16:59:57,762 | INFO     | job 6745061274 has completed (purged errors)
[2025-07-26 20:23:00] 2025-07-26 16:59:57,762 | INFO     | overall cleanup function is called
[2025-07-26 20:23:00] 2025-07-26 16:59:58,771 | INFO     | --- collectZombieJob: --- 10, [4681]
[2025-07-26 20:23:00] 2025-07-26 16:59:58,771 | INFO     | zombie collector waiting for pid 4681
[2025-07-26 20:23:00] 2025-07-26 16:59:58,771 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-26 20:23:00] 2025-07-26 16:59:58,771 | INFO     | collected zombie processes
[2025-07-26 20:23:00] 2025-07-26 16:59:58,771 | INFO     | will attempt to kill all subprocesses of pid=4681
[2025-07-26 20:23:00] 2025-07-26 16:59:58,891 | INFO     | process IDs to be killed: [4681] (in reverse order)
[2025-07-26 20:23:00] 2025-07-26 16:59:59,791 | WARNING  | found no corresponding commands to process id(s)
[2025-07-26 20:23:00] 2025-07-26 16:59:59,792 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-26 20:23:00] 2025-07-26 16:59:59,795 | INFO     | did not find any defunct processes belonging to 4681
[2025-07-26 20:23:00] 2025-07-26 16:59:59,798 | INFO     | did not find any defunct processes belonging to 4681
[2025-07-26 20:23:00] 2025-07-26 16:59:59,798 | INFO     | ready for new job
[2025-07-26 20:23:00] 2025-07-26 16:59:59,798 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-26 20:23:00] 2025-07-26 16:59:59,800 | INFO     | ***************************************
[2025-07-26 20:23:00] 2025-07-26 16:59:59,801 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-26 20:23:00] 2025-07-26 16:59:59,801 | INFO     | ***************************************
[2025-07-26 20:23:00] 2025-07-26 16:59:59,801 | INFO     | 
[2025-07-26 20:23:00] 2025-07-26 16:59:59,801 | INFO     | pilot is running in a VM
[2025-07-26 20:23:00] 2025-07-26 16:59:59,801 | INFO     | architecture information:
[2025-07-26 20:23:00] 2025-07-26 16:59:59,803 | INFO     | executing command: cat /etc/os-release
[2025-07-26 20:23:00] 2025-07-26 17:00:00,056 | INFO     | cat /etc/os-release:
[2025-07-26 20:23:00] NAME="CentOS Linux"
[2025-07-26 20:23:00] VERSION="7 (Core)"
[2025-07-26 20:23:00] ID="centos"
[2025-07-26 20:23:00] ID_LIKE="rhel fedora"
[2025-07-26 20:23:00] VERSION_ID="7"
[2025-07-26 20:23:00] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-26 20:23:00] ANSI_COLOR="0;31"
[2025-07-26 20:23:00] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-26 20:23:00] HOME_URL="https://www.centos.org/"
[2025-07-26 20:23:00] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-26 20:23:00] 
[2025-07-26 20:23:00] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-26 20:23:00] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-26 20:23:00] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-26 20:23:00] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-26 20:23:00] 
[2025-07-26 20:23:00] 2025-07-26 17:00:00,057 | INFO     | ***************************************
[2025-07-26 20:23:00] 2025-07-26 17:00:00,560 | INFO     | executing command: df -mP /var/lib/boinc/slots/9
[2025-07-26 20:23:00] 2025-07-26 17:00:00,818 | INFO     | sufficient remaining disk space (495800287232 B)
[2025-07-26 20:23:00] 2025-07-26 17:00:00,818 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-26 20:23:00] 2025-07-26 17:00:00,818 | INFO     | current server update state: UPDATING_FINAL
[2025-07-26 20:23:00] 2025-07-26 17:00:00,818 | INFO     | update_server=False
[2025-07-26 20:23:00] 2025-07-26 17:00:00,818 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-26 20:23:00] 2025-07-26 17:00:00,820 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-26 20:23:00] 2025-07-26 17:00:00,820 | INFO     | aborting loop
[2025-07-26 20:23:00] 2025-07-26 17:00:01,225 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-26 20:23:00] 2025-07-26 17:00:01,437 | INFO     | all payload control threads have been joined
[2025-07-26 20:23:00] 2025-07-26 17:00:01,560 | INFO     | all data control threads have been joined
[2025-07-26 20:23:00] 2025-07-26 17:00:01,825 | INFO     | [job] retrieve thread has finished
[2025-07-26 20:23:00] 2025-07-26 17:00:01,828 | INFO     | [job] job monitor thread has finished
[2025-07-26 20:23:00] 2025-07-26 17:00:01,887 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-26 20:23:00] 2025-07-26 17:00:01,925 | INFO     | [data] copytool_in thread has finished
[2025-07-26 20:23:00] 2025-07-26 17:00:01,972 | INFO     | [payload] execute_payloads thread has finished
[2025-07-26 20:23:00] 2025-07-26 17:00:02,156 | INFO     | all job control threads have been joined
[2025-07-26 20:23:00] 2025-07-26 17:00:02,209 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-26 20:23:00] 2025-07-26 17:00:02,243 | INFO     | [payload] validate_pre thread has finished
[2025-07-26 20:23:00] 2025-07-26 17:00:02,430 | INFO     | [job] validate thread has finished
[2025-07-26 20:23:00] 2025-07-26 17:00:02,443 | INFO     | [payload] control thread has finished
[2025-07-26 20:23:00] 2025-07-26 17:00:02,566 | INFO     | [data] control thread has finished
[2025-07-26 20:23:00] 2025-07-26 17:00:03,047 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-26 20:23:00] 2025-07-26 17:00:03,069 | INFO     | [payload] validate_post thread has finished
[2025-07-26 20:23:00] 2025-07-26 17:00:03,078 | INFO     | [job] create_data_payload thread has finished
[2025-07-26 20:23:00] 2025-07-26 17:00:03,162 | INFO     | [job] control thread has finished
[2025-07-26 20:23:00] 2025-07-26 17:00:03,215 | INFO     | [job] queue monitor thread has finished
[2025-07-26 20:23:00] 2025-07-26 17:00:03,232 | INFO     | [data] copytool_out thread has finished
[2025-07-26 20:23:00] 2025-07-26 17:00:03,360 | INFO     | [payload] failed_post thread has finished
[2025-07-26 20:23:00] 2025-07-26 17:00:05,895 | INFO     | [data] queue_monitor thread has finished
[2025-07-26 20:23:00] 2025-07-26 17:00:06,866 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139661383022400)>', '<ExcThread(monitor, started 139660659521280)>']
[2025-07-26 20:23:00] 2025-07-26 17:00:11,892 | INFO     | all workflow threads have been joined
[2025-07-26 20:23:00] 2025-07-26 17:00:11,892 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-26 20:23:00] 2025-07-26 17:00:11,892 | INFO     | traces error code: 0
[2025-07-26 20:23:00] 2025-07-26 17:00:11,893 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-26 20:23:00] 2025-07-26 17:00:29,021 | INFO     | PID=30546 has CPU usage=1.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-07-26 20:23:00] 2025-07-26 17:00:29,021 | INFO     | .. there are 9 such processes running
[2025-07-26 20:23:00] 2025-07-26 17:00:29,023 | INFO     | found 0 job(s) in 20 queues
[2025-07-26 20:23:00] 2025-07-26 17:00:29,023 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-26 20:23:00] 2025-07-26 17:00:29,023 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-26 20:23:00] 2025-07-26 17:00:29,023 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-26 20:23:00] 2025-07-26 17:00:29,023 | CRITICAL | thread 'MainThread' is not alive
[2025-07-26 20:23:00] 2025-07-26 17:00:29,023 | INFO     | [monitor] control thread has ended
[2025-07-26 20:23:00] 2025-07-26 17:00:29,379 [wrapper] ==== pilot stdout END ====
[2025-07-26 20:23:00] 2025-07-26 17:00:29,450 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-26 20:23:00] 2025-07-26 17:00:29,556 [wrapper] pilotpid: 30546
[2025-07-26 20:23:00] 2025-07-26 17:00:29,599 [wrapper] Pilot exit status: 0
[2025-07-26 20:23:00] 2025-07-26 17:00:29,999 [wrapper] pandaids: 6745061274
[2025-07-26 20:23:00] 2025-07-26 17:00:31,045 [wrapper] cleanup supervisor_pilot 16919 30547
[2025-07-26 20:23:00] 2025-07-26 17:00:31,051 [wrapper] Test setup, not cleaning
[2025-07-26 20:23:00] 2025-07-26 17:00:31,179 [wrapper] apfmon messages muted
[2025-07-26 20:23:00] 2025-07-26 17:00:31,321 [wrapper] ==== wrapper stdout END ====
[2025-07-26 20:23:00] 2025-07-26 17:00:31,438 [wrapper] ==== wrapper stderr END ====
[2025-07-26 20:23:00]  *** Error codes and diagnostics ***
[2025-07-26 20:23:00]     "exeErrorCode": 0,
[2025-07-26 20:23:00]     "exeErrorDiag": "",
[2025-07-26 20:23:00]     "pilotErrorCode": 0,
[2025-07-26 20:23:00]     "pilotErrorDiag": "",
[2025-07-26 20:23:00]  *** Listing of results directory ***
[2025-07-26 20:23:00] total 438384
[2025-07-26 20:23:00] -rw-r--r--. 1 boinc boinc    530466 Jul 25 21:17 pilot3.tar.gz
[2025-07-26 20:23:00] -rw-r--r--. 1 boinc boinc      5112 Jul 25 22:03 queuedata.json
[2025-07-26 20:23:00] -rwx------. 1 boinc boinc     36292 Jul 25 22:03 runpilot2-wrapper.sh
[2025-07-26 20:23:00] -rw-r--r--. 1 boinc boinc       100 Jul 26 14:26 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-26 20:23:00] -rwxr-xr-x. 1 boinc boinc      7986 Jul 26 14:26 run_atlas
[2025-07-26 20:23:00] -rw-r--r--. 1 boinc boinc       105 Jul 26 14:26 job.xml
[2025-07-26 20:23:00] -rw-r--r--. 2 boinc boinc 229367569 Jul 26 14:26 EVNT.45743347._001471.pool.root.1
[2025-07-26 20:23:00] -rw-r--r--. 1 boinc boinc      6392 Jul 26 14:26 init_data.xml
[2025-07-26 20:23:00] -rw-r--r--. 2 boinc boinc     15095 Jul 26 14:26 start_atlas.sh
[2025-07-26 20:23:00] drwxrwx--x. 2 boinc boinc        68 Jul 26 14:26 shared
[2025-07-26 20:23:00] -rw-r--r--. 2 boinc boinc    542897 Jul 26 14:26 input.tar.gz
[2025-07-26 20:23:00] -rw-r--r--. 1 boinc boinc         0 Jul 26 14:26 boinc_lockfile
[2025-07-26 20:23:00] -rw-r--r--. 1 boinc boinc      2563 Jul 26 14:26 pandaJob.out
[2025-07-26 20:23:00] -rw-------. 1 boinc boinc    980117 Jul 26 14:27 agis_schedconf.cvmfs.json
[2025-07-26 20:23:00] drwx------. 4 boinc boinc      4096 Jul 26 14:27 pilot3
[2025-07-26 20:23:00] -rw-------. 1 boinc boinc 212062557 Jul 26 18:56 HITS.45743349._026412.pool.root.1
[2025-07-26 20:23:00] -rw-r--r--. 1 boinc boinc       531 Jul 26 18:57 boinc_task_state.xml
[2025-07-26 20:23:00] -rw-------. 1 boinc boinc      1016 Jul 26 18:58 memory_monitor_summary.json
[2025-07-26 20:23:00] -rw-------. 1 boinc boinc   1593052 Jul 26 18:58 agis_ddmendpoints.agis.ALL.json
[2025-07-26 20:23:00] -rw-------. 1 boinc boinc    405945 Jul 26 18:58 log.45743349._026412.job.log.tgz.1
[2025-07-26 20:23:00] -rw-------. 1 boinc boinc      7778 Jul 26 18:59 heartbeat.json
[2025-07-26 20:23:00] -rw-------. 1 boinc boinc        95 Jul 26 19:00 pilot_heartbeat.json
[2025-07-26 20:23:00] -rw-------. 1 boinc boinc       890 Jul 26 19:00 pilotlog.txt
[2025-07-26 20:23:00] -rw-------. 1 boinc boinc   1400235 Jul 26 19:00 log.45743349._026412.job.log.1
[2025-07-26 20:23:00] -rw-------. 1 boinc boinc       357 Jul 26 19:00 output.list
[2025-07-26 20:23:00] -rw-r--r--. 1 boinc boinc       620 Jul 26 19:00 runtime_log
[2025-07-26 20:23:00] -rw-------. 1 boinc boinc   1822720 Jul 26 19:00 result.tar.gz
[2025-07-26 20:23:00] -rw-r--r--. 1 boinc boinc      8660 Jul 26 19:00 runtime_log.err
[2025-07-26 20:23:00] -rw-------. 1 boinc boinc       657 Jul 26 19:00 EAiLDm1odz7n9Rq4apOajLDm4fhM0noT9bVof3QYDmFYzKDmxv5mHo.diag
[2025-07-26 20:23:00] -rw-r--r--. 1 boinc boinc      8192 Jul 26 20:22 boinc_mmap_file
[2025-07-26 20:23:00] -rw-r--r--. 1 boinc boinc        28 Jul 26 20:23 wrapper_checkpoint.txt
[2025-07-26 20:23:00] -rw-r--r--. 1 boinc boinc     20555 Jul 26 20:23 stderr.txt
[2025-07-26 20:23:00] HITS file was successfully produced:
[2025-07-26 20:23:00] -rw-------. 1 boinc boinc 212062557 Jul 26 18:56 shared/HITS.pool.root.1
[2025-07-26 20:23:00]  *** Contents of shared directory: ***
[2025-07-26 20:23:00] total 433416
[2025-07-26 20:23:00] -rw-r--r--. 2 boinc boinc 229367569 Jul 26 14:26 ATLAS.root_0
[2025-07-26 20:23:00] -rw-r--r--. 2 boinc boinc     15095 Jul 26 14:26 start_atlas.sh
[2025-07-26 20:23:00] -rw-r--r--. 2 boinc boinc    542897 Jul 26 14:26 input.tar.gz
[2025-07-26 20:23:00] -rw-------. 1 boinc boinc 212062557 Jul 26 18:56 HITS.pool.root.1
[2025-07-26 20:23:00] -rw-------. 1 boinc boinc   1822720 Jul 26 19:00 result.tar.gz
20:23:01 (26506): run_atlas exited; CPU time 63360.105370
20:23:01 (26506): called boinc_finish(0)

</stderr_txt>
]]>

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