Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
19:01:39 (243639): wrapper (7.7.26015): starting
19:01:39 (243639): wrapper: running run_atlas (--nthreads 12)
[2025-07-25 19:01:39] Arguments: --nthreads 12
[2025-07-25 19:01:39] Threads: 12
[2025-07-25 19:01:39] Checking for CVMFS
[2025-07-25 19:01:39] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-25 19:01:39] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-25 19:01:39] Running cvmfs_config stat atlas.cern.ch
[2025-07-25 19:01:39] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-25 19:01:39] 2.11.5.0 11127 23296 340604 148759 1 317 44011421 45568000 12836 130560 0 191022739 99.745 140924292 24937 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-07-25 19:01:39] CVMFS is ok
[2025-07-25 19:01:39] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-25 19:01:39] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-25 19:01:39] Further information can be found at the LHC@home message board.
[2025-07-25 19:01:39] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-25 19:01:39] Checking for apptainer binary...
[2025-07-25 19:01:39] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-25 19:01:39] Running /usr/bin/apptainer --version
[2025-07-25 19:01:39] apptainer version 1.4.1-1.el9
[2025-07-25 19:01:39] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-25 19:01:39] wns0035.triumf.lcg
[2025-07-25 19:01:39] apptainer works
[2025-07-25 19:01:39] Set ATHENA_PROC_NUMBER=12
[2025-07-25 19:01:39] Set ATHENA_CORE_NUMBER=12
[2025-07-25 19:01:39] Starting ATLAS job with PandaID=6745065644
[2025-07-25 19:01:39] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-25 19:04:58]  *** The last 200 lines of the pilot log: ***
[2025-07-25 19:04:58] 2025-07-26 02:04:25,525 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-25 19:04:58] 2025-07-26 02:04:25,525 | WARNING  | found no stored workdir sizes
[2025-07-25 19:04:58] 2025-07-26 02:04:25,525 | INFO     | will not add max space = 0 B to job metrics
[2025-07-25 19:04:58] 2025-07-26 02:04:25,526 | WARNING  | wrong length of table data, x=[1753495328.0], y=[971.0] (must be same and length>=4)
[2025-07-25 19:04:58] 2025-07-26 02:04:25,526 | INFO     | could have reported an average CPU frequency of 2583 MHz (4 samples)
[2025-07-25 19:04:58] 2025-07-26 02:04:25,526 | INFO     | ..............................
[2025-07-25 19:04:58] 2025-07-26 02:04:25,526 | INFO     | . Timing measurements:
[2025-07-25 19:04:58] 2025-07-26 02:04:25,527 | INFO     | . get job = 0 s
[2025-07-25 19:04:58] 2025-07-26 02:04:25,527 | INFO     | . initial setup = 2 s
[2025-07-25 19:04:58] 2025-07-26 02:04:25,527 | INFO     | . payload setup = 3 s
[2025-07-25 19:04:58] 2025-07-26 02:04:25,527 | INFO     | . stage-in = 0 s
[2025-07-25 19:04:58] 2025-07-26 02:04:25,527 | INFO     | . payload execution = 13 s
[2025-07-25 19:04:58] 2025-07-26 02:04:25,527 | INFO     | . stage-out = 0 s
[2025-07-25 19:04:58] 2025-07-26 02:04:25,527 | INFO     | . log creation = 0 s
[2025-07-25 19:04:58] 2025-07-26 02:04:25,527 | INFO     | ..............................
[2025-07-25 19:04:58] 2025-07-26 02:04:25,527 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-07-25 19:04:58] 2025-07-26 02:04:25,527 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6745065644/pilotlog.txt
[2025-07-25 19:04:58] 2025-07-26 02:04:25,537 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-07-25 19:04:58] - Log from pilotlog.txt -
[2025-07-25 19:04:58] 2025-07-26 02:04:25,525 | INFO     | extracted standard memory fields from prmon json
[2025-07-25 19:04:58] 2025-07-26 02:04:25,525 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-25 19:04:58] 2025-07-26 02:04:25,525 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-25 19:04:58] 2025-07-26 02:04:25,525 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-25 19:04:58] 2025-07-26 02:04:25,525 | WARNING  | found no stored workdir sizes
[2025-07-25 19:04:58] 2025-07-26 02:04:25,525 | INFO     | will not add max space = 0 B to job metrics
[2025-07-25 19:04:58] 2025-07-26 02:04:25,526 | WARNING  | wrong length of table data, x=[1753495328.0], y=[971.0] (must be same and length>=4)
[2025-07-25 19:04:58] 2025-07-26 02:04:25,526 | INFO     | could have reported an average CPU frequency of 2583 MHz (4 samples)
[2025-07-25 19:04:58] 2025-07-26 02:04:25,526 | INFO     | ..............................
[2025-07-25 19:04:58] 2025-07-26 02:04:25,526 | INFO     | . Timing measurements:
[2025-07-25 19:04:58] 2025-07-26 02:04:25,527 | INFO     | . get job = 0 s
[2025-07-25 19:04:58] 2025-07-26 02:04:25,527 | INFO     | . initial setup = 2 s
[2025-07-25 19:04:58] 2025-07-26 02:04:25,527 | INFO     | . payload setup = 3 s
[2025-07-25 19:04:58] 2025-07-26 02:04:25,527 | INFO     | . stage-in = 0 s
[2025-07-25 19:04:58] 2025-07-26 02:04:25,527 | INFO     | . payload execution = 13 s
[2025-07-25 19:04:58] 2025-07-26 02:04:25,527 | INFO     | . stage-out = 0 s
[2025-07-25 19:04:58] 2025-07-26 02:04:25,527 | INFO     | . log creation = 0 s
[2025-07-25 19:04:58] 2025-07-26 02:04:25,527 | INFO     | ..............................
[2025-07-25 19:04:58] 2025-07-26 02:04:25,527 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-07-25 19:04:58] 2025-07-26 02:04:25,527 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6745065644/pilotlog.txt
[2025-07-25 19:04:58] 2025-07-26 02:04:25,538 | WARNING  | 
[2025-07-25 19:04:58] [begin log extracts]
[2025-07-25 19:04:58] - Log from pilotlog.txt -
[2025-07-25 19:04:58] 2025-07-26 02:04:25,525 | INFO     | extracted standard memory fields from prmon json
[2025-07-25 19:04:58] 2025-07-26 02:04:25,525 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-25 19:04:58] 2025-07-26 02:04:25,525 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-25 19:04:58] 2025-07-26 02:04:25,525 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-25 19:04:58] 2025-07-26 02:04:25,525 | WARNING  | found no stored workdir sizes
[2025-07-25 19:04:58] 2025-07-26 02:04:25,525 | INFO     | will not add max space = 0 B to job metrics
[2025-07-25 19:04:58] 2025-07-26 02:04:25,526 | WARNING  | wrong length of table data, x=[1753495328.0], y=[971.0] (must be same and length>=4)
[2025-07-25 19:04:58] 2025-07-26 02:04:25,526 | INFO     | could have reported an average CPU frequency of 2583 MHz (4 samples)
[2025-07-25 19:04:58] 2025-07-26 02:04:25,526 | INFO     | ..............................
[2025-07-25 19:04:58] 2025-07-26 02:04:25,526 | INFO     | . Timing measurements:
[2025-07-25 19:04:58] 2025-07-26 02:04:25,527 | INFO     | . get job = 0 s
[2025-07-25 19:04:58] 2025-07-26 02:04:25,527 | INFO     | . initial setup = 2 s
[2025-07-25 19:04:58] 2025-07-26 02:04:25,527 | INFO     | . payload setup = 3 s
[2025-07-25 19:04:58] 2025-07-26 02:04:25,527 | INFO     | . stage-in = 0 s
[2025-07-25 19:04:58] 2025-07-26 02:04:25,527 | INFO     | . payload execution = 13 s
[2025-07-25 19:04:58] 2025-07-26 02:04:25,527 | INFO     | . stage-out = 0 s
[2025-07-25 19:04:58] 2025-07-26 02:04:25,527 | INFO     | . log creation = 0 s
[2025-07-25 19:04:58] 2025-07-26 02:04:25,527 | INFO     | ..............................
[2025-07-25 19:04:58] 2025-07-26 02:04:25,527 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-07-25 19:04:58] 2025-07-26 02:04:25,527 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6745065644/pilotlog.txt
[2025-07-25 19:04:58] [end log extracts]
[2025-07-25 19:04:58] 2025-07-26 02:04:25,538 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-07-25 19:04:58] 2025-07-26 02:04:25,539 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-07-25 19:04:58] 2025-07-26 02:04:25,601 | INFO     | 
[2025-07-25 19:04:58] 2025-07-26 02:04:25,601 | INFO     | job summary report
[2025-07-25 19:04:58] 2025-07-26 02:04:25,601 | INFO     | --------------------------------------------------
[2025-07-25 19:04:58] 2025-07-26 02:04:25,601 | INFO     | PanDA job id: 6745065644
[2025-07-25 19:04:58] 2025-07-26 02:04:25,601 | INFO     | task id: 45743349
[2025-07-25 19:04:58] 2025-07-26 02:04:25,601 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-07-25 19:02:14,334 CRITICAL Transform executor raised TransformValidationExceptio
[2025-07-25 19:04:58] 2025-07-26 02:04:25,601 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-25 19:04:58] 2025-07-26 02:04:25,601 | INFO     | pilot state: failed 
[2025-07-25 19:04:58] 2025-07-26 02:04:25,601 | INFO     | transexitcode: 65
[2025-07-25 19:04:58] 2025-07-26 02:04:25,601 | INFO     | exeerrorcode: 65
[2025-07-25 19:04:58] 2025-07-26 02:04:25,601 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2025-07-25 19:04:58] 2025-07-26 02:04:25,602 | INFO     | exitcode: 65
[2025-07-25 19:04:58] 2025-07-26 02:04:25,602 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2025-07-25 19:04:58] 2025-07-26 02:04:25,602 | INFO     | cpuconsumptiontime: 15 s
[2025-07-25 19:04:58] 2025-07-26 02:04:25,602 | INFO     | nevents: 0
[2025-07-25 19:04:58] 2025-07-26 02:04:25,602 | INFO     | neventsw: 0
[2025-07-25 19:04:58] 2025-07-26 02:04:25,602 | INFO     | pid: 253524
[2025-07-25 19:04:58] 2025-07-26 02:04:25,602 | INFO     | pgrp: 253524
[2025-07-25 19:04:58] 2025-07-26 02:04:25,602 | INFO     | corecount: 12
[2025-07-25 19:04:58] 2025-07-26 02:04:25,602 | INFO     | event service: False
[2025-07-25 19:04:58] 2025-07-26 02:04:25,602 | INFO     | sizes: {0: 2396647, 1: 2397500, 4: 2397762, 11: 2397790, 21: 2425188, 24: 2425188, 145: 2425482}
[2025-07-25 19:04:58] 2025-07-26 02:04:25,602 | INFO     | --------------------------------------------------
[2025-07-25 19:04:58] 2025-07-26 02:04:25,602 | INFO     | 
[2025-07-25 19:04:58] 2025-07-26 02:04:25,602 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-07-25 19:04:58] 2025-07-26 02:04:25,616 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-25 19:04:58] 2025-07-26 02:04:25,616 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-25 19:04:58] 2025-07-26 02:04:25,616 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-25 19:04:58] 2025-07-26 02:04:25,616 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-25 19:04:58] 2025-07-26 02:04:25,616 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-25 19:04:58] 2025-07-26 02:04:25,617 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-25 19:04:58] 2025-07-26 02:04:25,617 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-25 19:04:58] 2025-07-26 02:04:25,617 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-25 19:04:58] 2025-07-26 02:04:25,617 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-25 19:04:58] 2025-07-26 02:04:25,617 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-25 19:04:58] 2025-07-26 02:04:25,617 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-25 19:04:58] 2025-07-26 02:04:25,617 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-25 19:04:58] 2025-07-26 02:04:25,617 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-25 19:04:58] 2025-07-26 02:04:25,617 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-25 19:04:58] 2025-07-26 02:04:25,617 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-25 19:04:58] 2025-07-26 02:04:25,617 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-25 19:04:58] 2025-07-26 02:04:25,617 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-25 19:04:58] 2025-07-26 02:04:25,617 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-25 19:04:58] 2025-07-26 02:04:25,617 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-25 19:04:58] 2025-07-26 02:04:25,617 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-25 19:04:58] 2025-07-26 02:04:25,617 | INFO     | job 6745065644 has completed (purged errors)
[2025-07-25 19:04:58] 2025-07-26 02:04:25,618 | INFO     | overall cleanup function is called
[2025-07-25 19:04:58] 2025-07-26 02:04:26,624 | INFO     | --- collectZombieJob: --- 10, [253524]
[2025-07-25 19:04:58] 2025-07-26 02:04:26,624 | INFO     | zombie collector waiting for pid 253524
[2025-07-25 19:04:58] 2025-07-26 02:04:26,624 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-25 19:04:58] 2025-07-26 02:04:26,624 | INFO     | collected zombie processes
[2025-07-25 19:04:58] 2025-07-26 02:04:26,624 | INFO     | will attempt to kill all subprocesses of pid=253524
[2025-07-25 19:04:58] 2025-07-26 02:04:26,780 | INFO     | process IDs to be killed: [253524] (in reverse order)
[2025-07-25 19:04:58] 2025-07-26 02:04:26,839 | WARNING  | found no corresponding commands to process id(s)
[2025-07-25 19:04:58] 2025-07-26 02:04:26,839 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-25 19:04:58] 2025-07-26 02:04:26,846 | INFO     | did not find any defunct processes belonging to 253524
[2025-07-25 19:04:58] 2025-07-26 02:04:26,853 | INFO     | did not find any defunct processes belonging to 253524
[2025-07-25 19:04:58] 2025-07-26 02:04:26,853 | INFO     | ready for new job
[2025-07-25 19:04:58] 2025-07-26 02:04:26,853 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-25 19:04:58] 2025-07-26 02:04:26,855 | INFO     | ***************************************
[2025-07-25 19:04:58] 2025-07-26 02:04:26,855 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-25 19:04:58] 2025-07-26 02:04:26,855 | INFO     | ***************************************
[2025-07-25 19:04:58] 2025-07-26 02:04:26,855 | INFO     | 
[2025-07-25 19:04:58] 2025-07-26 02:04:26,857 | INFO     | architecture information:
[2025-07-25 19:04:58] 2025-07-26 02:04:26,857 | INFO     | executing command: cat /etc/os-release
[2025-07-25 19:04:58] 2025-07-26 02:04:26,867 | INFO     | cat /etc/os-release:
[2025-07-25 19:04:58] NAME="CentOS Linux"
[2025-07-25 19:04:58] VERSION="7 (Core)"
[2025-07-25 19:04:58] ID="centos"
[2025-07-25 19:04:58] ID_LIKE="rhel fedora"
[2025-07-25 19:04:58] VERSION_ID="7"
[2025-07-25 19:04:58] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-25 19:04:58] ANSI_COLOR="0;31"
[2025-07-25 19:04:58] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-25 19:04:58] HOME_URL="https://www.centos.org/"
[2025-07-25 19:04:58] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-25 19:04:58] 
[2025-07-25 19:04:58] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-25 19:04:58] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-25 19:04:58] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-25 19:04:58] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-25 19:04:58] 
[2025-07-25 19:04:58] 2025-07-26 02:04:26,867 | INFO     | ***************************************
[2025-07-25 19:04:58] 2025-07-26 02:04:27,370 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-07-25 19:04:58] 2025-07-26 02:04:27,382 | INFO     | sufficient remaining disk space (2089436577792 B)
[2025-07-25 19:04:58] 2025-07-26 02:04:27,382 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-25 19:04:58] 2025-07-26 02:04:27,382 | INFO     | current server update state: UPDATING_FINAL
[2025-07-25 19:04:58] 2025-07-26 02:04:27,382 | INFO     | update_server=False
[2025-07-25 19:04:58] 2025-07-26 02:04:27,383 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-25 19:04:58] 2025-07-26 02:04:27,383 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-25 19:04:58] 2025-07-26 02:04:27,630 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-25 19:04:58] 2025-07-26 02:04:27,630 | INFO     | aborting loop
[2025-07-25 19:04:58] 2025-07-26 02:04:27,748 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-25 19:04:58] 2025-07-26 02:04:28,048 | INFO     | all payload control threads have been joined
[2025-07-25 19:04:58] 2025-07-26 02:04:28,157 | INFO     | all data control threads have been joined
[2025-07-25 19:04:58] 2025-07-26 02:04:28,388 | INFO     | [job] retrieve thread has finished
[2025-07-25 19:04:58] 2025-07-26 02:04:28,388 | INFO     | [job] queue monitor thread has finished
[2025-07-25 19:04:58] 2025-07-26 02:04:28,595 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-25 19:04:58] 2025-07-26 02:04:28,635 | INFO     | [job] job monitor thread has finished
[2025-07-25 19:04:58] 2025-07-26 02:04:29,047 | INFO     | [payload] execute_payloads thread has finished
[2025-07-25 19:04:58] 2025-07-26 02:04:29,053 | INFO     | [payload] control thread has finished
[2025-07-25 19:04:58] 2025-07-26 02:04:29,080 | INFO     | all job control threads have been joined
[2025-07-25 19:04:58] 2025-07-26 02:04:29,162 | INFO     | [data] control thread has finished
[2025-07-25 19:04:58] 2025-07-26 02:04:29,212 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-25 19:04:58] 2025-07-26 02:04:29,381 | INFO     | [job] validate thread has finished
[2025-07-25 19:04:58] 2025-07-26 02:04:29,415 | INFO     | [data] copytool_in thread has finished
[2025-07-25 19:04:58] 2025-07-26 02:04:29,512 | INFO     | [payload] failed_post thread has finished
[2025-07-25 19:04:58] 2025-07-26 02:04:29,516 | INFO     | [job] create_data_payload thread has finished
[2025-07-25 19:04:58] 2025-07-26 02:04:29,621 | INFO     | [payload] validate_pre thread has finished
[2025-07-25 19:04:58] 2025-07-26 02:04:29,753 | INFO     | [data] copytool_out thread has finished
[2025-07-25 19:04:58] 2025-07-26 02:04:29,841 | INFO     | [payload] validate_post thread has finished
[2025-07-25 19:04:58] 2025-07-26 02:04:30,085 | INFO     | [job] control thread has finished
[2025-07-25 19:04:58] 2025-07-26 02:04:32,600 | INFO     | [data] queue_monitor thread has finished
[2025-07-25 19:04:58] 2025-07-26 02:04:34,044 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139710597035840)>', '<ExcThread(monitor, started 139710269720320)>']
[2025-07-25 19:04:58] 2025-07-26 02:04:39,069 | INFO     | all workflow threads have been joined
[2025-07-25 19:04:58] 2025-07-26 02:04:39,070 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-25 19:04:58] 2025-07-26 02:04:39,070 | INFO     | traces error code: 0
[2025-07-25 19:04:58] 2025-07-26 02:04:39,070 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-25 19:04:58] 2025-07-26 02:04:57,865 | INFO     | PID=247214 has CPU usage=1.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-07-25 19:04:58] 2025-07-26 02:04:57,865 | INFO     | .. there are 21 such processes running
[2025-07-25 19:04:58] 2025-07-26 02:04:57,865 | INFO     | found 0 job(s) in 20 queues
[2025-07-25 19:04:58] 2025-07-26 02:04:57,866 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-25 19:04:58] 2025-07-26 02:04:57,866 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-25 19:04:58] 2025-07-26 02:04:57,866 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-25 19:04:58] 2025-07-26 02:04:57,866 | CRITICAL | thread 'MainThread' is not alive
[2025-07-25 19:04:58] 2025-07-26 02:04:57,866 | INFO     | [monitor] control thread has ended
[2025-07-25 19:04:58] 2025-07-26 02:04:57,982 [wrapper] ==== pilot stdout END ====
[2025-07-25 19:04:58] 2025-07-26 02:04:57,984 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-25 19:04:58] 2025-07-26 02:04:57,985 [wrapper] pilotpid: 247214
[2025-07-25 19:04:58] 2025-07-26 02:04:57,987 [wrapper] Pilot exit status: 0
[2025-07-25 19:04:58] 2025-07-26 02:04:57,994 [wrapper] pandaids: 6745065644
[2025-07-25 19:04:58] 2025-07-26 02:04:58,031 [wrapper] cleanup supervisor_pilot  247220 247215
[2025-07-25 19:04:58] 2025-07-26 02:04:58,034 [wrapper] Test setup, not cleaning
[2025-07-25 19:04:58] 2025-07-26 02:04:58,036 [wrapper] apfmon messages muted
[2025-07-25 19:04:58] 2025-07-26 02:04:58,038 [wrapper] ==== wrapper stdout END ====
[2025-07-25 19:04:58] 2025-07-26 02:04:58,040 [wrapper] ==== wrapper stderr END ====
[2025-07-25 19:04:58]  *** Error codes and diagnostics ***
[2025-07-25 19:04:58]     "exeErrorCode": 65,
[2025-07-25 19:04:58]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2025-07-25 19:04:58]     "pilotErrorCode": 1305,
[2025-07-25 19:04:58]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2025-07-25 19:04:58]  *** Listing of results directory ***
[2025-07-25 19:04:58] total 145228
[2025-07-25 19:04:58] -rw-r--r--. 1 boinc boinc    530466 Jul 25 15:55 pilot3.tar.gz
[2025-07-25 19:04:58] -rwx------. 1 boinc boinc     36292 Jul 25 16:11 runpilot2-wrapper.sh
[2025-07-25 19:04:58] -rw-r--r--. 1 boinc boinc      5112 Jul 25 16:11 queuedata.json
[2025-07-25 19:04:58] -rw-r--r--. 1 boinc boinc       100 Jul 25 19:01 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-25 19:04:58] -rwxr-xr-x. 1 boinc boinc      7986 Jul 25 19:01 run_atlas
[2025-07-25 19:04:58] -rw-r--r--. 1 boinc boinc       105 Jul 25 19:01 job.xml
[2025-07-25 19:04:58] -rw-r--r--. 1 boinc boinc      6596 Jul 25 19:01 init_data.xml
[2025-07-25 19:04:58] -rw-r--r--. 2 boinc boinc 144651100 Jul 25 19:01 EVNT.45743347._001600.pool.root.1
[2025-07-25 19:04:58] -rw-r--r--. 2 boinc boinc     15095 Jul 25 19:01 start_atlas.sh
[2025-07-25 19:04:58] drwxrwx--x. 2 boinc boinc      4096 Jul 25 19:01 shared
[2025-07-25 19:04:58] -rw-r--r--. 2 boinc boinc    542894 Jul 25 19:01 input.tar.gz
[2025-07-25 19:04:58] -rw-r--r--. 1 boinc boinc         0 Jul 25 19:01 boinc_lockfile
[2025-07-25 19:04:58] -rw-r--r--. 1 boinc boinc      2563 Jul 25 19:01 pandaJob.out
[2025-07-25 19:04:58] -rw-------. 1 boinc boinc    979985 Jul 25 19:01 agis_schedconf.cvmfs.json
[2025-07-25 19:04:58] -rw-------. 1 boinc boinc   1593052 Jul 25 19:01 agis_ddmendpoints.agis.ALL.json
[2025-07-25 19:04:58] drwx------. 4 boinc boinc      4096 Jul 25 19:01 pilot3
[2025-07-25 19:04:58] -rw-r--r--. 1 boinc boinc       522 Jul 25 19:02 boinc_task_state.xml
[2025-07-25 19:04:58] -rw-------. 1 boinc boinc       961 Jul 25 19:02 memory_monitor_summary.json
[2025-07-25 19:04:58] -rw-------. 1 boinc boinc     20253 Jul 25 19:02 log.45743349._028622.job.log.tgz.1
[2025-07-25 19:04:58] -rw-------. 1 boinc boinc      8386 Jul 25 19:04 heartbeat.json
[2025-07-25 19:04:58] -rw-r--r--. 1 boinc boinc        22 Jul 25 19:04 wrapper_checkpoint.txt
[2025-07-25 19:04:58] -rw-r--r--. 1 boinc boinc      8192 Jul 25 19:04 boinc_mmap_file
[2025-07-25 19:04:58] -rw-------. 1 boinc boinc        95 Jul 25 19:04 pilot_heartbeat.json
[2025-07-25 19:04:58] -rw-------. 1 boinc boinc       892 Jul 25 19:04 pilotlog.txt
[2025-07-25 19:04:58] -rw-------. 1 boinc boinc     74922 Jul 25 19:04 log.45743349._028622.job.log.1
[2025-07-25 19:04:58] -rw-------. 1 boinc boinc       188 Jul 25 19:04 output.list
[2025-07-25 19:04:58] -rw-r--r--. 1 boinc boinc       620 Jul 25 19:04 runtime_log
[2025-07-25 19:04:58] -rw-------. 1 boinc boinc    112640 Jul 25 19:04 result.tar.gz
[2025-07-25 19:04:58] -rw-r--r--. 1 boinc boinc      8485 Jul 25 19:04 runtime_log.err
[2025-07-25 19:04:58] -rw-------. 1 boinc boinc       644 Jul 25 19:04 AIYLDmBlgz7n9Rq4apOajLDm4fhM0noT9bVof3QYDmIlzKDm8GlBQn.diag
[2025-07-25 19:04:58] -rw-r--r--. 1 boinc boinc     21617 Jul 25 19:04 stderr.txt
[2025-07-25 19:04:58] No HITS result produced
[2025-07-25 19:04:58]  *** Contents of shared directory: ***
[2025-07-25 19:04:58] total 141924
[2025-07-25 19:04:58] -rw-r--r--. 2 boinc boinc 144651100 Jul 25 19:01 ATLAS.root_0
[2025-07-25 19:04:58] -rw-r--r--. 2 boinc boinc     15095 Jul 25 19:01 start_atlas.sh
[2025-07-25 19:04:58] -rw-r--r--. 2 boinc boinc    542894 Jul 25 19:01 input.tar.gz
[2025-07-25 19:04:58] -rw-------. 1 boinc boinc    112640 Jul 25 19:04 result.tar.gz
19:04:59 (243639): run_atlas exited; CPU time 18.521387
19:04:59 (243639): called boinc_finish(0)

</stderr_txt>
]]>

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