Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
21:58:12 (3201859): wrapper (7.7.26015): starting
21:58:12 (3201859): wrapper: running run_atlas (--nthreads 8)
[2025-07-25 21:58:12] Arguments: --nthreads 8
[2025-07-25 21:58:12] Threads: 8
[2025-07-25 21:58:12] Checking for CVMFS
[2025-07-25 21:58:12] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-25 21:58:13] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-25 21:58:13] Running cvmfs_config stat atlas.cern.ch
[2025-07-25 21:58:13] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-25 21:58:13] 2.13.1.0 82162 6111 199792 148759 2 196 35676525 40960001 19334 16776704 0 18256099 99.866 13553982 17513 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-07-25 21:58:13] CVMFS is ok
[2025-07-25 21:58:13] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-25 21:58:13] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-25 21:58:13] Further information can be found at the LHC@home message board.
[2025-07-25 21:58:13] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-25 21:58:13] Checking for apptainer binary...
[2025-07-25 21:58:13] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-25 21:58:13] Running /usr/bin/apptainer --version
[2025-07-25 21:58:13] apptainer version 1.4.1-1.el9
[2025-07-25 21:58:13] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-25 21:58:14] c-211-33-1.aglt2.org
[2025-07-25 21:58:14] apptainer works
[2025-07-25 21:58:14] Set ATHENA_PROC_NUMBER=8
[2025-07-25 21:58:14] Set ATHENA_CORE_NUMBER=8
[2025-07-25 21:58:14] Starting ATLAS job with PandaID=6745061120
[2025-07-25 21:58:14] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
22:00:03 (3201859): BOINC client no longer exists - exiting
22:00:03 (3201859): timer handler: client dead, exiting
22:02:34 (3222188): wrapper (7.7.26015): starting
22:02:34 (3222188): wrapper: running run_atlas (--nthreads 8)
[2025-07-25 22:02:34] Arguments: --nthreads 8
[2025-07-25 22:02:34] Threads: 8
[2025-07-25 22:02:34] This job has been restarted, cleaning up previous attempt
[2025-07-25 22:02:34] Checking for CVMFS
[2025-07-25 22:02:34] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-25 22:02:35] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-25 22:02:35] Running cvmfs_config stat atlas.cern.ch
[2025-07-25 22:02:35] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-25 22:02:35] 2.13.1.0 82162 6115 199792 148759 2 196 35681052 40960001 17524 16776704 0 18302270 99.866 13553982 17513 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-07-25 22:02:35] CVMFS is ok
[2025-07-25 22:02:35] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-25 22:02:35] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-25 22:02:35] Further information can be found at the LHC@home message board.
[2025-07-25 22:02:35] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-25 22:02:35] Checking for apptainer binary...
[2025-07-25 22:02:35] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-25 22:02:35] Running /usr/bin/apptainer --version
[2025-07-25 22:02:35] apptainer version 1.4.1-1.el9
[2025-07-25 22:02:35] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-25 22:02:35] c-211-33-1.aglt2.org
[2025-07-25 22:02:35] apptainer works
[2025-07-25 22:02:35] Set ATHENA_PROC_NUMBER=8
[2025-07-25 22:02:35] Set ATHENA_CORE_NUMBER=8
[2025-07-25 22:02:35] Starting ATLAS job with PandaID=6745061120
[2025-07-25 22:02:35] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-26 01:35:08]  *** The last 200 lines of the pilot log: ***
[2025-07-26 01:35:08] 2025-07-26 05:34:34,370 | INFO     | extracted standard memory fields from prmon json
[2025-07-26 01:35:08] 2025-07-26 05:34:34,370 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-26 01:35:08] 2025-07-26 05:34:34,370 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-26 01:35:08] 2025-07-26 05:34:34,370 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-26 01:35:08] 2025-07-26 05:34:34,374 | INFO     | fitting pss+swap vs Time
[2025-07-26 01:35:08] 2025-07-26 05:34:34,375 | INFO     | sum of square deviations: 2790599940.45673
[2025-07-26 01:35:08] 2025-07-26 05:34:34,377 | INFO     | sum of deviations: 33834573668.71634
[2025-07-26 01:35:08] 2025-07-26 05:34:34,377 | INFO     | mean x: 1753501728.2644231
[2025-07-26 01:35:08] 2025-07-26 05:34:34,377 | INFO     | mean y: 2485947.6778846155
[2025-07-26 01:35:08] 2025-07-26 05:34:34,377 | INFO     | -- intersect: -21257811002.473213
[2025-07-26 01:35:08] 2025-07-26 05:34:34,377 | INFO     | intersect: -21257811002.473213
[2025-07-26 01:35:08] 2025-07-26 05:34:34,377 | INFO     | chi2: 2.370353301306136
[2025-07-26 01:35:08] 2025-07-26 05:34:34,378 | INFO     | sum of square deviations: 2594216842.463039
[2025-07-26 01:35:08] 2025-07-26 05:34:34,379 | INFO     | sum of deviations: 46512174311.81772
[2025-07-26 01:35:08] 2025-07-26 05:34:34,379 | INFO     | mean x: 1753501575.7832513
[2025-07-26 01:35:08] 2025-07-26 05:34:34,379 | INFO     | mean y: 2495579.0640394087
[2025-07-26 01:35:08] 2025-07-26 05:34:34,379 | INFO     | -- intersect: -31436345466.868935
[2025-07-26 01:35:08] 2025-07-26 05:34:34,379 | INFO     | intersect: -31436345466.868935
[2025-07-26 01:35:08] 2025-07-26 05:34:34,380 | INFO     | chi2: 1.5930988785255853
[2025-07-26 01:35:08] 2025-07-26 05:34:34,380 | INFO     | current chi2=1.5930988785255853 (change=32.79065708695241 %)
[2025-07-26 01:35:08] 2025-07-26 05:34:34,380 | INFO     | sum of square deviations: 2407238634.590894
[2025-07-26 01:35:08] 2025-07-26 05:34:34,381 | INFO     | sum of deviations: 45083191685.924255
[2025-07-26 01:35:08] 2025-07-26 05:34:34,381 | INFO     | mean x: 1753501423.2878788
[2025-07-26 01:35:08] 2025-07-26 05:34:34,381 | INFO     | mean y: 2494414.1767676766
[2025-07-26 01:35:08] 2025-07-26 05:34:34,382 | INFO     | -- intersect: -32837390943.12327
[2025-07-26 01:35:08] 2025-07-26 05:34:34,382 | INFO     | intersect: -32837390943.12327
[2025-07-26 01:35:08] 2025-07-26 05:34:34,382 | INFO     | chi2: 1.5934623156375982
[2025-07-26 01:35:08] 2025-07-26 05:34:34,382 | INFO     | current chi2=1.5934623156375982 (change=-0.022813217491514548 %)
[2025-07-26 01:35:08] 2025-07-26 05:34:34,382 | INFO     | right removable region: 197
[2025-07-26 01:35:08] 2025-07-26 05:34:34,383 | INFO     | sum of square deviations: 2594119852.463039
[2025-07-26 01:35:08] 2025-07-26 05:34:34,384 | INFO     | sum of deviations: -2825775830.4827614
[2025-07-26 01:35:08] 2025-07-26 05:34:34,384 | INFO     | mean x: 1753501880.7832513
[2025-07-26 01:35:08] 2025-07-26 05:34:34,384 | INFO     | mean y: 2514164.0344827585
[2025-07-26 01:35:08] 2025-07-26 05:34:34,384 | INFO     | -- intersect: 1912604489.552307
[2025-07-26 01:35:08] 2025-07-26 05:34:34,385 | INFO     | intersect: 1912604489.552307
[2025-07-26 01:35:08] 2025-07-26 05:34:34,385 | INFO     | chi2: 0.7997008262304881
[2025-07-26 01:35:08] 2025-07-26 05:34:34,385 | INFO     | current chi2=0.7997008262304881 (change=66.26237844840139 %)
[2025-07-26 01:35:08] 2025-07-26 05:34:34,385 | INFO     | sum of square deviations: 2407106691.0100927
[2025-07-26 01:35:08] 2025-07-26 05:34:34,387 | INFO     | sum of deviations: -3713230427.7171745
[2025-07-26 01:35:08] 2025-07-26 05:34:34,387 | INFO     | mean x: 1753502033.2929294
[2025-07-26 01:35:08] 2025-07-26 05:34:34,387 | INFO     | mean y: 2514881.702020202
[2025-07-26 01:35:08] 2025-07-26 05:34:34,387 | INFO     | -- intersect: 2707487257.6273127
[2025-07-26 01:35:08] 2025-07-26 05:34:34,387 | INFO     | intersect: 2707487257.6273127
[2025-07-26 01:35:08] 2025-07-26 05:34:34,388 | INFO     | chi2: 0.7995085326228
[2025-07-26 01:35:08] 2025-07-26 05:34:34,388 | INFO     | current chi2=0.7995085326228 (change=0.024045693261883615 %)
[2025-07-26 01:35:08] 2025-07-26 05:34:34,388 | INFO     | left removable region: 20
[2025-07-26 01:35:08] 2025-07-26 05:34:34,388 | INFO     | sum of square deviations: 1719585043.4689264
[2025-07-26 01:35:08] 2025-07-26 05:34:34,389 | INFO     | sum of deviations: 7151782324.265535
[2025-07-26 01:35:08] 2025-07-26 05:34:34,389 | INFO     | mean x: 1753502002.858757
[2025-07-26 01:35:08] 2025-07-26 05:34:34,389 | INFO     | mean y: 2526803.570621469
[2025-07-26 01:35:08] 2025-07-26 05:34:34,389 | INFO     | -- intersect: -7290316709.6011
[2025-07-26 01:35:08] 2025-07-26 05:34:34,390 | INFO     | intersect: -7290316709.6011
[2025-07-26 01:35:08] 2025-07-26 05:34:34,390 | INFO     | chi2: 0.0009255656996474135
[2025-07-26 01:35:08] 2025-07-26 05:34:34,390 | INFO     | -- intersect: -7290316709.6011
[2025-07-26 01:35:08] 2025-07-26 05:34:34,390 | INFO     | current memory leak: 4.16 B/s (using 177 data points, chi2=0.00)
[2025-07-26 01:35:08] 2025-07-26 05:34:34,391 | INFO     | could have reported an average CPU frequency of 2530 MHz (10 samples)
[2025-07-26 01:35:08] 2025-07-26 05:34:34,391 | INFO     | ..............................
[2025-07-26 01:35:08] 2025-07-26 05:34:34,391 | INFO     | . Timing measurements:
[2025-07-26 01:35:08] 2025-07-26 05:34:34,391 | INFO     | . get job = 0 s
[2025-07-26 01:35:08] 2025-07-26 05:34:34,391 | INFO     | . initial setup = 1 s
[2025-07-26 01:35:08] 2025-07-26 05:34:34,391 | INFO     | . payload setup = 13 s
[2025-07-26 01:35:08] 2025-07-26 05:34:34,391 | INFO     | . stage-in = 0 s
[2025-07-26 01:35:08] 2025-07-26 05:34:34,391 | INFO     | . payload execution = 12649 s
[2025-07-26 01:35:08] 2025-07-26 05:34:34,391 | INFO     | . stage-out = 2 s
[2025-07-26 01:35:08] 2025-07-26 05:34:34,392 | INFO     | . log creation = 0 s
[2025-07-26 01:35:08] 2025-07-26 05:34:34,392 | INFO     | ..............................
[2025-07-26 01:35:08] 2025-07-26 05:34:34,518 | INFO     | 
[2025-07-26 01:35:08] 2025-07-26 05:34:34,518 | INFO     | job summary report
[2025-07-26 01:35:08] 2025-07-26 05:34:34,519 | INFO     | --------------------------------------------------
[2025-07-26 01:35:08] 2025-07-26 05:34:34,519 | INFO     | PanDA job id: 6745061120
[2025-07-26 01:35:08] 2025-07-26 05:34:34,519 | INFO     | task id: 45743349
[2025-07-26 01:35:08] 2025-07-26 05:34:34,519 | INFO     | errors: (none)
[2025-07-26 01:35:08] 2025-07-26 05:34:34,519 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-26 01:35:08] 2025-07-26 05:34:34,519 | INFO     | pilot state: finished 
[2025-07-26 01:35:08] 2025-07-26 05:34:34,519 | INFO     | transexitcode: 0
[2025-07-26 01:35:08] 2025-07-26 05:34:34,519 | INFO     | exeerrorcode: 0
[2025-07-26 01:35:08] 2025-07-26 05:34:34,519 | INFO     | exeerrordiag: 
[2025-07-26 01:35:08] 2025-07-26 05:34:34,519 | INFO     | exitcode: 0
[2025-07-26 01:35:08] 2025-07-26 05:34:34,519 | INFO     | exitmsg: OK
[2025-07-26 01:35:08] 2025-07-26 05:34:34,520 | INFO     | cpuconsumptiontime: 60474 s
[2025-07-26 01:35:08] 2025-07-26 05:34:34,520 | INFO     | nevents: 400
[2025-07-26 01:35:08] 2025-07-26 05:34:34,520 | INFO     | neventsw: 0
[2025-07-26 01:35:08] 2025-07-26 05:34:34,520 | INFO     | pid: 3252256
[2025-07-26 01:35:08] 2025-07-26 05:34:34,520 | INFO     | pgrp: 3252256
[2025-07-26 01:35:08] 2025-07-26 05:34:34,520 | INFO     | corecount: 8
[2025-07-26 01:35:08] 2025-07-26 05:34:34,520 | INFO     | event service: False
[2025-07-26 01:35:08] 2025-07-26 05:34:34,520 | INFO     | sizes: {0: 2397303, 1: 2397502, 9: 2397764, 12: 2397792, 12666: 2427752, 12667: 2427751, 12671: 2436989, 12681: 2437127}
[2025-07-26 01:35:08] 2025-07-26 05:34:34,520 | INFO     | --------------------------------------------------
[2025-07-26 01:35:08] 2025-07-26 05:34:34,520 | INFO     | 
[2025-07-26 01:35:08] 2025-07-26 05:34:34,521 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-07-26 01:35:08] 2025-07-26 05:34:34,558 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-26 01:35:08] 2025-07-26 05:34:34,558 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-26 01:35:08] 2025-07-26 05:34:34,559 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-26 01:35:08] 2025-07-26 05:34:34,559 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-26 01:35:08] 2025-07-26 05:34:34,559 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-26 01:35:08] 2025-07-26 05:34:34,559 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-26 01:35:08] 2025-07-26 05:34:34,559 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-26 01:35:08] 2025-07-26 05:34:34,559 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-26 01:35:08] 2025-07-26 05:34:34,559 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-26 01:35:08] 2025-07-26 05:34:34,559 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-26 01:35:08] 2025-07-26 05:34:34,559 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-26 01:35:08] 2025-07-26 05:34:34,560 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-26 01:35:08] 2025-07-26 05:34:34,560 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-26 01:35:08] 2025-07-26 05:34:34,560 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-26 01:35:08] 2025-07-26 05:34:34,560 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-26 01:35:08] 2025-07-26 05:34:34,560 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-26 01:35:08] 2025-07-26 05:34:34,560 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-26 01:35:08] 2025-07-26 05:34:34,560 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-26 01:35:08] 2025-07-26 05:34:34,560 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-26 01:35:08] 2025-07-26 05:34:34,560 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-26 01:35:08] 2025-07-26 05:34:34,560 | INFO     | job 6745061120 has completed (purged errors)
[2025-07-26 01:35:08] 2025-07-26 05:34:34,561 | INFO     | overall cleanup function is called
[2025-07-26 01:35:08] 2025-07-26 05:34:35,571 | INFO     | --- collectZombieJob: --- 10, [3252256]
[2025-07-26 01:35:08] 2025-07-26 05:34:35,571 | INFO     | zombie collector waiting for pid 3252256
[2025-07-26 01:35:08] 2025-07-26 05:34:35,571 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-26 01:35:08] 2025-07-26 05:34:35,572 | INFO     | collected zombie processes
[2025-07-26 01:35:08] 2025-07-26 05:34:35,572 | INFO     | will attempt to kill all subprocesses of pid=3252256
[2025-07-26 01:35:08] 2025-07-26 05:34:35,989 | INFO     | process IDs to be killed: [3252256] (in reverse order)
[2025-07-26 01:35:08] 2025-07-26 05:34:36,118 | WARNING  | found no corresponding commands to process id(s)
[2025-07-26 01:35:08] 2025-07-26 05:34:36,119 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-26 01:35:08] 2025-07-26 05:34:36,137 | INFO     | did not find any defunct processes belonging to 3252256
[2025-07-26 01:35:08] 2025-07-26 05:34:36,155 | INFO     | did not find any defunct processes belonging to 3252256
[2025-07-26 01:35:08] 2025-07-26 05:34:36,156 | INFO     | ready for new job
[2025-07-26 01:35:08] 2025-07-26 05:34:36,156 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-26 01:35:08] 2025-07-26 05:34:36,159 | INFO     | ***************************************
[2025-07-26 01:35:08] 2025-07-26 05:34:36,162 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-26 01:35:08] 2025-07-26 05:34:36,162 | INFO     | ***************************************
[2025-07-26 01:35:08] 2025-07-26 05:34:36,162 | INFO     | 
[2025-07-26 01:35:08] 2025-07-26 05:34:36,169 | INFO     | architecture information:
[2025-07-26 01:35:08] 2025-07-26 05:34:36,170 | INFO     | executing command: cat /etc/os-release
[2025-07-26 01:35:08] 2025-07-26 05:34:36,208 | INFO     | cat /etc/os-release:
[2025-07-26 01:35:08] NAME="CentOS Linux"
[2025-07-26 01:35:08] VERSION="7 (Core)"
[2025-07-26 01:35:08] ID="centos"
[2025-07-26 01:35:08] ID_LIKE="rhel fedora"
[2025-07-26 01:35:08] VERSION_ID="7"
[2025-07-26 01:35:08] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-26 01:35:08] ANSI_COLOR="0;31"
[2025-07-26 01:35:08] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-26 01:35:08] HOME_URL="https://www.centos.org/"
[2025-07-26 01:35:08] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-26 01:35:08] 
[2025-07-26 01:35:08] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-26 01:35:08] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-26 01:35:08] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-26 01:35:08] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-26 01:35:08] 
[2025-07-26 01:35:08] 2025-07-26 05:34:36,208 | INFO     | ***************************************
[2025-07-26 01:35:08] 2025-07-26 05:34:36,712 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-07-26 01:35:08] 2025-07-26 05:34:36,741 | INFO     | sufficient remaining disk space (128792395776 B)
[2025-07-26 01:35:08] 2025-07-26 05:34:36,741 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-26 01:35:08] 2025-07-26 05:34:36,742 | INFO     | current server update state: UPDATING_FINAL
[2025-07-26 01:35:08] 2025-07-26 05:34:36,742 | INFO     | update_server=False
[2025-07-26 01:35:08] 2025-07-26 05:34:36,742 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-26 01:35:08] 2025-07-26 05:34:36,743 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-26 01:35:08] 2025-07-26 05:34:36,743 | INFO     | aborting loop
[2025-07-26 01:35:08] 2025-07-26 05:34:36,936 | INFO     | all data control threads have been joined
[2025-07-26 01:35:08] 2025-07-26 05:34:37,036 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-26 01:35:08] 2025-07-26 05:34:37,444 | INFO     | all job control threads have been joined
[2025-07-26 01:35:08] 2025-07-26 05:34:37,732 | INFO     | all payload control threads have been joined
[2025-07-26 01:35:08] 2025-07-26 05:34:37,748 | INFO     | [job] retrieve thread has finished
[2025-07-26 01:35:08] 2025-07-26 05:34:37,749 | INFO     | [job] job monitor thread has finished
[2025-07-26 01:35:08] 2025-07-26 05:34:37,946 | INFO     | [data] control thread has finished
[2025-07-26 01:35:08] 2025-07-26 05:34:38,214 | INFO     | [payload] failed_post thread has finished
[2025-07-26 01:35:08] 2025-07-26 05:34:38,400 | INFO     | [data] copytool_in thread has finished
[2025-07-26 01:35:08] 2025-07-26 05:34:38,450 | INFO     | [job] control thread has finished
[2025-07-26 01:35:08] 2025-07-26 05:34:38,627 | INFO     | [payload] execute_payloads thread has finished
[2025-07-26 01:35:08] 2025-07-26 05:34:38,737 | INFO     | [payload] control thread has finished
[2025-07-26 01:35:08] 2025-07-26 05:34:38,816 | INFO     | [job] validate thread has finished
[2025-07-26 01:35:08] 2025-07-26 05:34:38,851 | INFO     | [payload] validate_pre thread has finished
[2025-07-26 01:35:08] 2025-07-26 05:34:39,044 | INFO     | [data] copytool_out thread has finished
[2025-07-26 01:35:08] 2025-07-26 05:34:39,144 | INFO     | [payload] validate_post thread has finished
[2025-07-26 01:35:08] 2025-07-26 05:34:39,163 | INFO     | [job] create_data_payload thread has finished
[2025-07-26 01:35:08] 2025-07-26 05:34:39,164 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-26 01:35:08] 2025-07-26 05:34:39,225 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-26 01:35:08] 2025-07-26 05:34:39,530 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-26 01:35:08] 2025-07-26 05:34:40,536 | INFO     | [job] queue monitor thread has finished
[2025-07-26 01:35:08] 2025-07-26 05:34:43,233 | INFO     | [data] queue_monitor thread has finished
[2025-07-26 01:35:08] 2025-07-26 05:34:43,433 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140328296519488)>', '<ExcThread(monitor, started 140327444801280)>']
[2025-07-26 01:35:08] 2025-07-26 05:34:48,459 | INFO     | all workflow threads have been joined
[2025-07-26 01:35:08] 2025-07-26 05:34:48,459 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-26 01:35:08] 2025-07-26 05:34:48,460 | INFO     | traces error code: 0
[2025-07-26 01:35:08] 2025-07-26 05:34:48,460 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-26 01:35:08] 2025-07-26 05:35:08,044 | INFO     | PID=3232949 has CPU usage=6.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-26 01:35:08] 2025-07-26 05:35:08,044 | INFO     | .. there are 15 such processes running
[2025-07-26 01:35:08] 2025-07-26 05:35:08,045 | INFO     | found 0 job(s) in 20 queues
[2025-07-26 01:35:08] 2025-07-26 05:35:08,045 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-26 01:35:08] 2025-07-26 05:35:08,045 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-26 01:35:08] 2025-07-26 05:35:08,045 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-26 01:35:08] 2025-07-26 05:35:08,045 | INFO     | [monitor] control thread has ended
[2025-07-26 01:35:08] 2025-07-26 05:35:08,435 [wrapper] ==== pilot stdout END ====
[2025-07-26 01:35:08] 2025-07-26 05:35:08,440 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-26 01:35:08] 2025-07-26 05:35:08,444 [wrapper] pilotpid: 3232949
[2025-07-26 01:35:08] 2025-07-26 05:35:08,448 [wrapper] Pilot exit status: 0
[2025-07-26 01:35:08] 2025-07-26 05:35:08,466 [wrapper] pandaids: 6745061120 6745061120
[2025-07-26 01:35:08] 2025-07-26 05:35:08,549 [wrapper] cleanup supervisor_pilot 3591877 3232950
[2025-07-26 01:35:08] 2025-07-26 05:35:08,554 [wrapper] Test setup, not cleaning
[2025-07-26 01:35:08] 2025-07-26 05:35:08,561 [wrapper] apfmon messages muted
[2025-07-26 01:35:08] 2025-07-26 05:35:08,565 [wrapper] ==== wrapper stdout END ====
[2025-07-26 01:35:08] 2025-07-26 05:35:08,572 [wrapper] ==== wrapper stderr END ====
[2025-07-26 01:35:08]  *** Error codes and diagnostics ***
[2025-07-26 01:35:08]     "exeErrorCode": 0,
[2025-07-26 01:35:08]     "exeErrorDiag": "",
[2025-07-26 01:35:08]     "pilotErrorCode": 0,
[2025-07-26 01:35:08]     "pilotErrorDiag": "",
[2025-07-26 01:35:08]  *** Listing of results directory ***
[2025-07-26 01:35:08] total 662300
[2025-07-26 01:35:08] drwx------. 4 boincer umatlas      4096 Jun 17 06:04 pilot3
[2025-07-26 01:35:08] -rw-r--r--. 1 boincer umatlas    530466 Jul 25 15:17 pilot3.tar.gz
[2025-07-26 01:35:08] -rwx------. 1 boincer umatlas     36292 Jul 25 15:58 runpilot2-wrapper.sh
[2025-07-26 01:35:08] -rw-r--r--. 1 boincer umatlas      5112 Jul 25 15:58 queuedata.json
[2025-07-26 01:35:08] -rw-r--r--. 1 boincer umatlas       100 Jul 25 21:58 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-26 01:35:08] -rwxr-xr-x. 1 boincer umatlas      7986 Jul 25 21:58 run_atlas
[2025-07-26 01:35:08] -rw-r--r--. 1 boincer umatlas       105 Jul 25 21:58 job.xml
[2025-07-26 01:35:08] -rw-r--r--. 3 boincer umatlas 229632211 Jul 25 21:58 EVNT.45743347._001466.pool.root.1
[2025-07-26 01:35:08] -rw-r--r--. 3 boincer umatlas 229632211 Jul 25 21:58 ATLAS.root_0
[2025-07-26 01:35:08] -rw-r--r--. 2 boincer umatlas     15095 Jul 25 21:58 start_atlas.sh
[2025-07-26 01:35:08] drwxrwx--x. 2 boincer umatlas      4096 Jul 25 21:58 shared
[2025-07-26 01:35:08] -rw-r--r--. 2 boincer umatlas    542891 Jul 25 21:58 input.tar.gz
[2025-07-26 01:35:08] -rw-r--r--. 1 boincer umatlas         0 Jul 25 21:58 boinc_lockfile
[2025-07-26 01:35:08] -rw-r--r--. 1 boincer umatlas      2562 Jul 25 22:02 pandaJob.out
[2025-07-26 01:35:08] -rw-------. 1 boincer umatlas    979985 Jul 25 22:02 agis_schedconf.cvmfs.json
[2025-07-26 01:35:08] -rw-r--r--. 1 boincer umatlas      6858 Jul 26 01:29 init_data.xml
[2025-07-26 01:35:08] -rw-------. 1 boincer umatlas 212160240 Jul 26 01:33 HITS.45743349._026285.pool.root.1
[2025-07-26 01:35:08] -rw-r--r--. 1 boincer umatlas       531 Jul 26 01:33 boinc_task_state.xml
[2025-07-26 01:35:08] -rw-------. 1 boincer umatlas        96 Jul 26 01:34 pilot_heartbeat.json
[2025-07-26 01:35:08] -rw-------. 1 boincer umatlas      1056 Jul 26 01:34 memory_monitor_summary.json
[2025-07-26 01:35:08] -rw-------. 1 boincer umatlas   1593052 Jul 26 01:34 agis_ddmendpoints.agis.ALL.json
[2025-07-26 01:35:08] -rw-------. 1 boincer umatlas    373638 Jul 26 01:34 log.45743349._026285.job.log.tgz.1
[2025-07-26 01:35:08] -rw-------. 1 boincer umatlas      7853 Jul 26 01:34 heartbeat.json
[2025-07-26 01:35:08] -rw-r--r--. 1 boincer umatlas      8192 Jul 26 01:34 boinc_mmap_file
[2025-07-26 01:35:08] -rw-r--r--. 1 boincer umatlas        28 Jul 26 01:34 wrapper_checkpoint.txt
[2025-07-26 01:35:08] -rw-------. 1 boincer umatlas       823 Jul 26 01:35 pilotlog.txt
[2025-07-26 01:35:08] -rw-------. 1 boincer umatlas   1068926 Jul 26 01:35 log.45743349._026285.job.log.1
[2025-07-26 01:35:08] -rw-------. 1 boincer umatlas       357 Jul 26 01:35 output.list
[2025-07-26 01:35:08] -rw-r--r--. 1 boincer umatlas       620 Jul 26 01:35 runtime_log
[2025-07-26 01:35:08] -rw-------. 1 boincer umatlas   1464320 Jul 26 01:35 result.tar.gz
[2025-07-26 01:35:08] -rw-r--r--. 1 boincer umatlas      8756 Jul 26 01:35 runtime_log.err
[2025-07-26 01:35:08] -rw-------. 1 boincer umatlas       786 Jul 26 01:35 5ueMDm2jdz7n9Rq4apOajLDm4fhM0noT9bVof3QYDmBWzKDmmS1vem.diag
[2025-07-26 01:35:08] -rw-r--r--. 1 boincer umatlas     23281 Jul 26 01:35 stderr.txt
[2025-07-26 01:35:08] HITS file was successfully produced:
[2025-07-26 01:35:08] -rw-------. 1 boincer umatlas 212160240 Jul 26 01:33 shared/HITS.pool.root.1
[2025-07-26 01:35:08]  *** Contents of shared directory: ***
[2025-07-26 01:35:08] total 433428
[2025-07-26 01:35:08] -rw-r--r--. 3 boincer umatlas 229632211 Jul 25 21:58 ATLAS.root_0
[2025-07-26 01:35:08] -rw-r--r--. 2 boincer umatlas     15095 Jul 25 21:58 start_atlas.sh
[2025-07-26 01:35:08] -rw-r--r--. 2 boincer umatlas    542891 Jul 25 21:58 input.tar.gz
[2025-07-26 01:35:08] -rw-------. 1 boincer umatlas 212160240 Jul 26 01:33 HITS.pool.root.1
[2025-07-26 01:35:08] -rw-------. 1 boincer umatlas   1464320 Jul 26 01:35 result.tar.gz
01:35:10 (3222188): run_atlas exited; CPU time 60891.895015
01:35:10 (3222188): called boinc_finish(0)

</stderr_txt>
]]>

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