Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
21:52:52 (13848): wrapper (7.7.26015): starting
21:52:52 (13848): wrapper: running run_atlas (--nthreads 4)
[2025-07-25 21:52:52] Arguments: --nthreads 4
[2025-07-25 21:52:52] Threads: 4
[2025-07-25 21:52:52] Checking for CVMFS
[2025-07-25 21:52:52] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-25 21:52:52] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-25 21:52:52] Running cvmfs_config stat atlas.cern.ch
[2025-07-25 21:52:52] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-25 21:52:52] 2.11.2.0 26179 523984 96584 148759 0 57 14775273 20275201 1 130560 0 63239066 99.975 22689479 20801 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-07-25 21:52:52] CVMFS is ok
[2025-07-25 21:52:52] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-25 21:52:52] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-25 21:52:52] Further information can be found at the LHC@home message board.
[2025-07-25 21:52:52] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-25 21:52:52] Checking for apptainer binary...
[2025-07-25 21:52:52] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-25 21:52:52] Running /usr/bin/apptainer --version
[2025-07-25 21:52:52] apptainer version 1.3.2-1.el7
[2025-07-25 21:52:52] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-25 21:52:53] c-205-33.aglt2.org
[2025-07-25 21:52:53] apptainer works
[2025-07-25 21:52:53] Set ATHENA_PROC_NUMBER=4
[2025-07-25 21:52:53] Set ATHENA_CORE_NUMBER=4
[2025-07-25 21:52:53] Starting ATLAS job with PandaID=6745058773
[2025-07-25 21:52:53] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-25 23:49:16]  *** The last 200 lines of the pilot log: ***
[2025-07-25 23:49:16] 2025-07-26 03:48:43,884 | INFO     | chi2: 0.029172871263490906
[2025-07-25 23:49:16] 2025-07-26 03:48:43,884 | INFO     | current chi2=0.029172871263490906 (change=61.49984598353644 %)
[2025-07-25 23:49:16] 2025-07-26 03:48:43,884 | INFO     | sum of square deviations: 300842850.0
[2025-07-25 23:49:16] 2025-07-26 03:48:43,884 | INFO     | sum of deviations: 960797214.0
[2025-07-25 23:49:16] 2025-07-26 03:48:43,884 | INFO     | mean x: 1753498707.0
[2025-07-25 23:49:16] 2025-07-26 03:48:43,884 | INFO     | mean y: 2328929.626262626
[2025-07-25 23:49:16] 2025-07-26 03:48:43,884 | INFO     | -- intersect: -5597793102.3189945
[2025-07-25 23:49:16] 2025-07-26 03:48:43,884 | INFO     | intersect: -5597793102.3189945
[2025-07-25 23:49:16] 2025-07-26 03:48:43,884 | INFO     | chi2: 0.000131527712941592
[2025-07-25 23:49:16] 2025-07-26 03:48:43,884 | INFO     | current chi2=0.000131527712941592 (change=99.54914375155731 %)
[2025-07-25 23:49:16] 2025-07-26 03:48:43,885 | INFO     | sum of square deviations: 257521107.5
[2025-07-25 23:49:16] 2025-07-26 03:48:43,885 | INFO     | sum of deviations: 735839278.9999999
[2025-07-25 23:49:16] 2025-07-26 03:48:43,885 | INFO     | mean x: 1753498859.5
[2025-07-25 23:49:16] 2025-07-26 03:48:43,885 | INFO     | mean y: 2329720.8085106383
[2025-07-25 23:49:16] 2025-07-26 03:48:43,885 | INFO     | -- intersect: -5008107478.0211115
[2025-07-25 23:49:16] 2025-07-26 03:48:43,885 | INFO     | intersect: -5008107478.0211115
[2025-07-25 23:49:16] 2025-07-26 03:48:43,885 | INFO     | chi2: 9.345528323511466e-05
[2025-07-25 23:49:16] 2025-07-26 03:48:43,885 | INFO     | current chi2=9.345528323511466e-05 (change=28.946317741709926 %)
[2025-07-25 23:49:16] 2025-07-26 03:48:43,885 | INFO     | sum of square deviations: 218571540.0
[2025-07-25 23:49:16] 2025-07-26 03:48:43,886 | INFO     | sum of deviations: 552318400.0
[2025-07-25 23:49:16] 2025-07-26 03:48:43,886 | INFO     | mean x: 1753499012.0
[2025-07-25 23:49:16] 2025-07-26 03:48:43,886 | INFO     | mean y: 2330439.0898876404
[2025-07-25 23:49:16] 2025-07-26 03:48:43,886 | INFO     | -- intersect: -4428666243.778435
[2025-07-25 23:49:16] 2025-07-26 03:48:43,886 | INFO     | intersect: -4428666243.778435
[2025-07-25 23:49:16] 2025-07-26 03:48:43,886 | INFO     | chi2: 6.419202113068104e-05
[2025-07-25 23:49:16] 2025-07-26 03:48:43,886 | INFO     | current chi2=6.419202113068104e-05 (change=31.312581901670722 %)
[2025-07-25 23:49:16] 2025-07-26 03:48:43,886 | INFO     | sum of square deviations: 183761585.0
[2025-07-25 23:49:16] 2025-07-26 03:48:43,886 | INFO     | sum of deviations: 423432659.0
[2025-07-25 23:49:16] 2025-07-26 03:48:43,886 | INFO     | mean x: 1753499164.5
[2025-07-25 23:49:16] 2025-07-26 03:48:43,886 | INFO     | mean y: 2331002.1666666665
[2025-07-25 23:49:16] 2025-07-26 03:48:43,886 | INFO     | -- intersect: -4038169703.0188785
[2025-07-25 23:49:16] 2025-07-26 03:48:43,886 | INFO     | intersect: -4038169703.0188785
[2025-07-25 23:49:16] 2025-07-26 03:48:43,886 | INFO     | chi2: 5.2499961321932567e-05
[2025-07-25 23:49:16] 2025-07-26 03:48:43,887 | INFO     | current chi2=5.2499961321932567e-05 (change=18.214194852886738 %)
[2025-07-25 23:49:16] 2025-07-26 03:48:43,887 | INFO     | left removable region: 60
[2025-07-25 23:49:16] 2025-07-26 03:48:43,887 | INFO     | sum of square deviations: 34277852.0
[2025-07-25 23:49:16] 2025-07-26 03:48:43,887 | INFO     | sum of deviations: 56406333.999999985
[2025-07-25 23:49:16] 2025-07-26 03:48:43,887 | INFO     | mean x: 1753499896.5
[2025-07-25 23:49:16] 2025-07-26 03:48:43,887 | INFO     | mean y: 2332913.5833333335
[2025-07-25 23:49:16] 2025-07-26 03:48:43,887 | INFO     | -- intersect: -2883160052.281167
[2025-07-25 23:49:16] 2025-07-26 03:48:43,887 | INFO     | intersect: -2883160052.281167
[2025-07-25 23:49:16] 2025-07-26 03:48:43,887 | INFO     | chi2: 1.8506306521642675e-05
[2025-07-25 23:49:16] 2025-07-26 03:48:43,887 | INFO     | -- intersect: -2883160052.281167
[2025-07-25 23:49:16] 2025-07-26 03:48:43,887 | INFO     | current memory leak: 1.65 B/s (using 48 data points, chi2=0.00)
[2025-07-25 23:49:16] 2025-07-26 03:48:43,887 | INFO     | could have reported an average CPU frequency of 3131 MHz (7 samples)
[2025-07-25 23:49:16] 2025-07-26 03:48:43,887 | INFO     | ..............................
[2025-07-25 23:49:16] 2025-07-26 03:48:43,888 | INFO     | . Timing measurements:
[2025-07-25 23:49:16] 2025-07-26 03:48:43,888 | INFO     | . get job = 0 s
[2025-07-25 23:49:16] 2025-07-26 03:48:43,888 | INFO     | . initial setup = 2 s
[2025-07-25 23:49:16] 2025-07-26 03:48:43,888 | INFO     | . payload setup = 5 s
[2025-07-25 23:49:16] 2025-07-26 03:48:43,888 | INFO     | . stage-in = 0 s
[2025-07-25 23:49:16] 2025-07-26 03:48:43,888 | INFO     | . payload execution = 6916 s
[2025-07-25 23:49:16] 2025-07-26 03:48:43,888 | INFO     | . stage-out = 0 s
[2025-07-25 23:49:16] 2025-07-26 03:48:43,888 | INFO     | . log creation = 0 s
[2025-07-25 23:49:16] 2025-07-26 03:48:43,888 | INFO     | ..............................
[2025-07-25 23:49:16] 2025-07-26 03:48:43,928 | INFO     | 
[2025-07-25 23:49:16] 2025-07-26 03:48:43,928 | INFO     | job summary report
[2025-07-25 23:49:16] 2025-07-26 03:48:43,928 | INFO     | --------------------------------------------------
[2025-07-25 23:49:16] 2025-07-26 03:48:43,928 | INFO     | PanDA job id: 6745058773
[2025-07-25 23:49:16] 2025-07-26 03:48:43,928 | INFO     | task id: 45743349
[2025-07-25 23:49:16] 2025-07-26 03:48:43,929 | INFO     | errors: (none)
[2025-07-25 23:49:16] 2025-07-26 03:48:43,929 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-25 23:49:16] 2025-07-26 03:48:43,929 | INFO     | pilot state: finished 
[2025-07-25 23:49:16] 2025-07-26 03:48:43,929 | INFO     | transexitcode: 0
[2025-07-25 23:49:16] 2025-07-26 03:48:43,929 | INFO     | exeerrorcode: 0
[2025-07-25 23:49:16] 2025-07-26 03:48:43,929 | INFO     | exeerrordiag: 
[2025-07-25 23:49:16] 2025-07-26 03:48:43,929 | INFO     | exitcode: 0
[2025-07-25 23:49:16] 2025-07-26 03:48:43,929 | INFO     | exitmsg: OK
[2025-07-25 23:49:16] 2025-07-26 03:48:43,929 | INFO     | cpuconsumptiontime: 26927 s
[2025-07-25 23:49:16] 2025-07-26 03:48:43,929 | INFO     | nevents: 400
[2025-07-25 23:49:16] 2025-07-26 03:48:43,929 | INFO     | neventsw: 0
[2025-07-25 23:49:16] 2025-07-26 03:48:43,929 | INFO     | pid: 23877
[2025-07-25 23:49:16] 2025-07-26 03:48:43,929 | INFO     | pgrp: 23877
[2025-07-25 23:49:16] 2025-07-26 03:48:43,929 | INFO     | corecount: 4
[2025-07-25 23:49:16] 2025-07-26 03:48:43,929 | INFO     | event service: False
[2025-07-25 23:49:16] 2025-07-26 03:48:43,929 | INFO     | sizes: {0: 2397422, 3: 2397684, 11: 2397712, 6925: 2434038, 6926: 2434038, 6929: 2434232}
[2025-07-25 23:49:16] 2025-07-26 03:48:43,929 | INFO     | --------------------------------------------------
[2025-07-25 23:49:16] 2025-07-26 03:48:43,929 | INFO     | 
[2025-07-25 23:49:16] 2025-07-26 03:48:43,929 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-07-25 23:49:16] 2025-07-26 03:48:43,940 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-25 23:49:16] 2025-07-26 03:48:43,940 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-25 23:49:16] 2025-07-26 03:48:43,940 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-25 23:49:16] 2025-07-26 03:48:43,940 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-25 23:49:16] 2025-07-26 03:48:43,940 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-25 23:49:16] 2025-07-26 03:48:43,940 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-25 23:49:16] 2025-07-26 03:48:43,940 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-25 23:49:16] 2025-07-26 03:48:43,940 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-25 23:49:16] 2025-07-26 03:48:43,940 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-25 23:49:16] 2025-07-26 03:48:43,940 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-25 23:49:16] 2025-07-26 03:48:43,940 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-25 23:49:16] 2025-07-26 03:48:43,940 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-25 23:49:16] 2025-07-26 03:48:43,940 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-25 23:49:16] 2025-07-26 03:48:43,940 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-25 23:49:16] 2025-07-26 03:48:43,940 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-25 23:49:16] 2025-07-26 03:48:43,940 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-25 23:49:16] 2025-07-26 03:48:43,940 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-25 23:49:16] 2025-07-26 03:48:43,940 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-25 23:49:16] 2025-07-26 03:48:43,941 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-25 23:49:16] 2025-07-26 03:48:43,941 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-25 23:49:16] 2025-07-26 03:48:43,941 | INFO     | job 6745058773 has completed (purged errors)
[2025-07-25 23:49:16] 2025-07-26 03:48:43,941 | INFO     | overall cleanup function is called
[2025-07-25 23:49:16] 2025-07-26 03:48:44,579 | WARNING  | process 23877 can no longer be monitored (due to stat problems) - aborting
[2025-07-25 23:49:16] 2025-07-26 03:48:44,601 | INFO     | using path: /tmp/boinchome/slots/0/memory_monitor_summary.json (trf name=prmon)
[2025-07-25 23:49:16] 2025-07-26 03:48:44,601 | INFO     | using path: /tmp/boinchome/slots/0/memory_monitor_summary.json (trf name=prmon)
[2025-07-25 23:49:16] 2025-07-26 03:48:44,602 | INFO     | skipping file size check of payload stdout file (/tmp/boinchome/slots/0/PanDA_Pilot-6745058773/payload.stdout) since it has not been created yet
[2025-07-25 23:49:16] 2025-07-26 03:48:44,602 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-07-25 23:49:16] 2025-07-26 03:48:44,610 | INFO     | sufficient remaining disk space (18733858816 B)
[2025-07-25 23:49:16] 2025-07-26 03:48:44,610 | WARNING  | skipping size check of workdir since it has not been created yet
[2025-07-25 23:49:16] 2025-07-26 03:48:44,610 | INFO     | output file size check: skipping output file /tmp/boinchome/slots/0/PanDA_Pilot-6745058773/HITS.45743349._024196.pool.root.1 since it does not exist
[2025-07-25 23:49:16] 2025-07-26 03:48:44,640 | INFO     | number of running child processes to parent process 23877: 1
[2025-07-25 23:49:16] 2025-07-26 03:48:44,640 | INFO     | maximum number of monitored processes: 6
[2025-07-25 23:49:16] 2025-07-26 03:48:44,640 | INFO     | aborting job monitoring since job object (job id=6745058773) has expired
[2025-07-25 23:49:16] 2025-07-26 03:48:44,947 | INFO     | --- collectZombieJob: --- 10, [23877]
[2025-07-25 23:49:16] 2025-07-26 03:48:44,947 | INFO     | zombie collector waiting for pid 23877
[2025-07-25 23:49:16] 2025-07-26 03:48:44,947 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-25 23:49:16] 2025-07-26 03:48:44,948 | INFO     | collected zombie processes
[2025-07-25 23:49:16] 2025-07-26 03:48:44,948 | INFO     | will attempt to kill all subprocesses of pid=23877
[2025-07-25 23:49:16] 2025-07-26 03:48:44,979 | INFO     | process IDs to be killed: [23877] (in reverse order)
[2025-07-25 23:49:16] 2025-07-26 03:48:45,000 | WARNING  | found no corresponding commands to process id(s)
[2025-07-25 23:49:16] 2025-07-26 03:48:45,000 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-25 23:49:16] 2025-07-26 03:48:45,001 | INFO     | did not find any defunct processes belonging to 23877
[2025-07-25 23:49:16] 2025-07-26 03:48:45,002 | INFO     | did not find any defunct processes belonging to 23877
[2025-07-25 23:49:16] 2025-07-26 03:48:45,002 | INFO     | ready for new job
[2025-07-25 23:49:16] 2025-07-26 03:48:45,002 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-25 23:49:16] 2025-07-26 03:48:45,003 | INFO     | ***************************************
[2025-07-25 23:49:16] 2025-07-26 03:48:45,003 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-25 23:49:16] 2025-07-26 03:48:45,003 | INFO     | ***************************************
[2025-07-25 23:49:16] 2025-07-26 03:48:45,003 | INFO     | 
[2025-07-25 23:49:16] 2025-07-26 03:48:45,003 | INFO     | architecture information:
[2025-07-25 23:49:16] 2025-07-26 03:48:45,004 | INFO     | executing command: cat /etc/os-release
[2025-07-25 23:49:16] 2025-07-26 03:48:45,010 | INFO     | cat /etc/os-release:
[2025-07-25 23:49:16] NAME="CentOS Linux"
[2025-07-25 23:49:16] VERSION="7 (Core)"
[2025-07-25 23:49:16] ID="centos"
[2025-07-25 23:49:16] ID_LIKE="rhel fedora"
[2025-07-25 23:49:16] VERSION_ID="7"
[2025-07-25 23:49:16] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-25 23:49:16] ANSI_COLOR="0;31"
[2025-07-25 23:49:16] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-25 23:49:16] HOME_URL="https://www.centos.org/"
[2025-07-25 23:49:16] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-25 23:49:16] 
[2025-07-25 23:49:16] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-25 23:49:16] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-25 23:49:16] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-25 23:49:16] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-25 23:49:16] 
[2025-07-25 23:49:16] 2025-07-26 03:48:45,010 | INFO     | ***************************************
[2025-07-25 23:49:16] 2025-07-26 03:48:45,513 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-07-25 23:49:16] 2025-07-26 03:48:45,536 | INFO     | sufficient remaining disk space (18734907392 B)
[2025-07-25 23:49:16] 2025-07-26 03:48:45,536 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-25 23:49:16] 2025-07-26 03:48:45,537 | INFO     | current server update state: UPDATING_FINAL
[2025-07-25 23:49:16] 2025-07-26 03:48:45,537 | INFO     | update_server=False
[2025-07-25 23:49:16] 2025-07-26 03:48:45,537 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-25 23:49:16] 2025-07-26 03:48:45,537 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-25 23:49:16] 2025-07-26 03:48:45,538 | INFO     | will abort loop
[2025-07-25 23:49:16] 2025-07-26 03:48:45,538 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-25 23:49:16] 2025-07-26 03:48:45,538 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-25 23:49:16] 2025-07-26 03:48:45,856 | INFO     | all job control threads have been joined
[2025-07-25 23:49:16] 2025-07-26 03:48:45,974 | INFO     | all payload control threads have been joined
[2025-07-25 23:49:16] 2025-07-26 03:48:46,378 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-25 23:49:16] 2025-07-26 03:48:46,543 | INFO     | [job] retrieve thread has finished
[2025-07-25 23:49:16] 2025-07-26 03:48:46,543 | INFO     | [job] queue monitor thread has finished
[2025-07-25 23:49:16] 2025-07-26 03:48:46,544 | INFO     | [job] job monitor thread has finished
[2025-07-25 23:49:16] 2025-07-26 03:48:46,551 | INFO     | all data control threads have been joined
[2025-07-25 23:49:16] 2025-07-26 03:48:46,791 | INFO     | [job] validate thread has finished
[2025-07-25 23:49:16] 2025-07-26 03:48:46,806 | INFO     | [job] create_data_payload thread has finished
[2025-07-25 23:49:16] 2025-07-26 03:48:46,862 | INFO     | [job] control thread has finished
[2025-07-25 23:49:16] 2025-07-26 03:48:46,952 | INFO     | [payload] validate_post thread has finished
[2025-07-25 23:49:16] 2025-07-26 03:48:46,979 | INFO     | [payload] control thread has finished
[2025-07-25 23:49:16] 2025-07-26 03:48:47,066 | INFO     | [payload] validate_pre thread has finished
[2025-07-25 23:49:16] 2025-07-26 03:48:47,543 | INFO     | [data] copytool_out thread has finished
[2025-07-25 23:49:16] 2025-07-26 03:48:47,556 | INFO     | [data] control thread has finished
[2025-07-25 23:49:16] 2025-07-26 03:48:47,926 | INFO     | [payload] execute_payloads thread has finished
[2025-07-25 23:49:16] 2025-07-26 03:48:47,986 | INFO     | [payload] failed_post thread has finished
[2025-07-25 23:49:16] 2025-07-26 03:48:48,032 | INFO     | [data] copytool_in thread has finished
[2025-07-25 23:49:16] 2025-07-26 03:48:50,384 | INFO     | [data] queue_monitor thread has finished
[2025-07-25 23:49:16] 2025-07-26 03:48:56,149 | INFO     | job.realtimelogging is not enabled
[2025-07-25 23:49:16] 2025-07-26 03:48:57,154 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-25 23:49:16] 2025-07-26 03:48:59,206 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140353658591040)>', '<ExcThread(monitor, started 140353088780032)>']
[2025-07-25 23:49:16] 2025-07-26 03:49:04,228 | INFO     | all workflow threads have been joined
[2025-07-25 23:49:16] 2025-07-26 03:49:04,228 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-25 23:49:16] 2025-07-26 03:49:04,228 | INFO     | traces error code: 0
[2025-07-25 23:49:16] 2025-07-26 03:49:04,229 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-25 23:49:16] 2025-07-26 03:49:16,525 | INFO     | PID=17439 has CPU usage=0.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-07-25 23:49:16] 2025-07-26 03:49:16,525 | INFO     | found 0 job(s) in 20 queues
[2025-07-25 23:49:16] 2025-07-26 03:49:16,525 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-25 23:49:16] 2025-07-26 03:49:16,525 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-25 23:49:16] 2025-07-26 03:49:16,525 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-25 23:49:16] 2025-07-26 03:49:16,525 | INFO     | [monitor] control thread has ended
[2025-07-25 23:49:16] 2025-07-26 03:49:16,586 [wrapper] ==== pilot stdout END ====
[2025-07-25 23:49:16] 2025-07-26 03:49:16,588 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-25 23:49:16] 2025-07-26 03:49:16,591 [wrapper] pilotpid: 17439
[2025-07-25 23:49:16] 2025-07-26 03:49:16,593 [wrapper] Pilot exit status: 0
[2025-07-25 23:49:16] 2025-07-26 03:49:16,599 [wrapper] pandaids: 6745058773
[2025-07-25 23:49:16] 2025-07-26 03:49:16,613 [wrapper] cleanup supervisor_pilot 25864 17440
[2025-07-25 23:49:16] 2025-07-26 03:49:16,615 [wrapper] Test setup, not cleaning
[2025-07-25 23:49:16] 2025-07-26 03:49:16,617 [wrapper] apfmon messages muted
[2025-07-25 23:49:16] 2025-07-26 03:49:16,619 [wrapper] ==== wrapper stdout END ====
[2025-07-25 23:49:16] 2025-07-26 03:49:16,621 [wrapper] ==== wrapper stderr END ====
[2025-07-25 23:49:16]  *** Error codes and diagnostics ***
[2025-07-25 23:49:16]     "exeErrorCode": 0,
[2025-07-25 23:49:16]     "exeErrorDiag": "",
[2025-07-25 23:49:16]     "pilotErrorCode": 0,
[2025-07-25 23:49:16]     "pilotErrorDiag": "",
[2025-07-25 23:49:16]  *** Listing of results directory ***
[2025-07-25 23:49:16] total 357900
[2025-07-25 23:49:16] -rw-r--r-- 1 boincer umatlas    530466 Jul 25 13:06 pilot3.tar.gz
[2025-07-25 23:49:16] -rw-r--r-- 1 boincer umatlas      5112 Jul 25 13:17 queuedata.json
[2025-07-25 23:49:16] -rwx------ 1 boincer umatlas     36292 Jul 25 13:17 runpilot2-wrapper.sh
[2025-07-25 23:49:16] -rw-r--r-- 1 boincer umatlas       100 Jul 25 21:52 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-25 23:49:16] -rwxr-xr-x 1 boincer umatlas      7986 Jul 25 21:52 run_atlas
[2025-07-25 23:49:16] -rw-r--r-- 1 boincer umatlas       105 Jul 25 21:52 job.xml
[2025-07-25 23:49:16] -rw-r--r-- 2 boincer umatlas 149078184 Jul 25 21:52 EVNT.45743347._001373.pool.root.1
[2025-07-25 23:49:16] -rw-r--r-- 2 boincer umatlas     15095 Jul 25 21:52 start_atlas.sh
[2025-07-25 23:49:16] drwxrwx--x 2 boincer umatlas      4096 Jul 25 21:52 shared
[2025-07-25 23:49:16] -rw-r--r-- 2 boincer umatlas    542890 Jul 25 21:52 input.tar.gz
[2025-07-25 23:49:16] -rw-r--r-- 1 boincer umatlas         0 Jul 25 21:52 boinc_lockfile
[2025-07-25 23:49:16] -rw-r--r-- 1 boincer umatlas      2561 Jul 25 21:52 pandaJob.out
[2025-07-25 23:49:16] -rw------- 1 boincer umatlas    979985 Jul 25 21:52 agis_schedconf.cvmfs.json
[2025-07-25 23:49:16] -rw------- 1 boincer umatlas   1593052 Jul 25 21:53 agis_ddmendpoints.agis.ALL.json
[2025-07-25 23:49:16] drwx------ 4 boincer umatlas      4096 Jul 25 21:53 pilot3
[2025-07-25 23:49:16] -rw-r--r-- 1 boincer umatlas      6154 Jul 25 23:47 init_data.xml
[2025-07-25 23:49:16] -rw------- 1 boincer umatlas 211713036 Jul 25 23:48 HITS.45743349._024196.pool.root.1
[2025-07-25 23:49:16] -rw-r--r-- 1 boincer umatlas       530 Jul 25 23:48 boinc_task_state.xml
[2025-07-25 23:49:16] -rw------- 1 boincer umatlas      1044 Jul 25 23:48 memory_monitor_summary.json
[2025-07-25 23:49:16] -rw------- 1 boincer umatlas    260518 Jul 25 23:48 log.45743349._024196.job.log.tgz.1
[2025-07-25 23:49:16] -rw------- 1 boincer umatlas      7827 Jul 25 23:48 heartbeat.json
[2025-07-25 23:49:16] -rw-r--r-- 1 boincer umatlas      8192 Jul 25 23:48 boinc_mmap_file
[2025-07-25 23:49:16] -rw-r--r-- 1 boincer umatlas        27 Jul 25 23:48 wrapper_checkpoint.txt
[2025-07-25 23:49:16] -rw------- 1 boincer umatlas       745 Jul 25 23:49 pilotlog.txt
[2025-07-25 23:49:16] -rw------- 1 boincer umatlas        95 Jul 25 23:49 pilot_heartbeat.json
[2025-07-25 23:49:16] -rw------- 1 boincer umatlas    650638 Jul 25 23:49 log.45743349._024196.job.log.1
[2025-07-25 23:49:16] -rw------- 1 boincer umatlas       357 Jul 25 23:49 output.list
[2025-07-25 23:49:16] -rw-r--r-- 1 boincer umatlas       620 Jul 25 23:49 runtime_log
[2025-07-25 23:49:16] -rw------- 1 boincer umatlas    931840 Jul 25 23:49 result.tar.gz
[2025-07-25 23:49:16] -rw------- 1 boincer umatlas       656 Jul 25 23:49 XHzMDm1Dbz7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm71PLDmwVAMMn.diag
[2025-07-25 23:49:16] -rw-r--r-- 1 boincer umatlas      8660 Jul 25 23:49 runtime_log.err
[2025-07-25 23:49:16] -rw-r--r-- 1 boincer umatlas     21390 Jul 25 23:49 stderr.txt
[2025-07-25 23:49:16] HITS file was successfully produced:
[2025-07-25 23:49:16] -rw------- 1 boincer umatlas 211713036 Jul 25 23:48 shared/HITS.pool.root.1
[2025-07-25 23:49:16]  *** Contents of shared directory: ***
[2025-07-25 23:49:16] total 353804
[2025-07-25 23:49:16] -rw-r--r-- 2 boincer umatlas 149078184 Jul 25 21:52 ATLAS.root_0
[2025-07-25 23:49:16] -rw-r--r-- 2 boincer umatlas     15095 Jul 25 21:52 start_atlas.sh
[2025-07-25 23:49:16] -rw-r--r-- 2 boincer umatlas    542890 Jul 25 21:52 input.tar.gz
[2025-07-25 23:49:16] -rw------- 1 boincer umatlas 211713036 Jul 25 23:48 HITS.pool.root.1
[2025-07-25 23:49:16] -rw------- 1 boincer umatlas    931840 Jul 25 23:49 result.tar.gz
23:49:18 (13848): run_atlas exited; CPU time 26942.710813
23:49:18 (13848): called boinc_finish(0)

</stderr_txt>
]]>

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