Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
06:51:52 (1278346): wrapper (7.7.26015): starting
06:51:52 (1278346): wrapper: running run_atlas (--nthreads 4)
[2025-07-28 06:51:52] Arguments: --nthreads 4
[2025-07-28 06:51:52] Threads: 4
[2025-07-28 06:51:52] Checking for CVMFS
[2025-07-28 06:51:52] No cvmfs_config command found, will try listing directly
[2025-07-28 06:51:52] CVMFS is ok
[2025-07-28 06:51:52] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-28 06:51:52] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-28 06:51:52] Further information can be found at the LHC@home message board.
[2025-07-28 06:51:52] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-28 06:51:52] Checking for apptainer binary...
[2025-07-28 06:51:52] which: no apptainer in ((null))
[2025-07-28 06:51:52] apptainer is not installed, using version from CVMFS
[2025-07-28 06:51:52] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-28 06:51:52] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot60/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut11.grid.cesnet.cz
[2025-07-28 06:51:52] apptainer works
[2025-07-28 06:51:52] Set ATHENA_PROC_NUMBER=4
[2025-07-28 06:51:52] Set ATHENA_CORE_NUMBER=4
[2025-07-28 06:51:52] Starting ATLAS job with PandaID=6745058368
[2025-07-28 06:51:52] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot60/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
09:45:01 (2144078): wrapper (7.7.26015): starting
09:45:01 (2144078): wrapper: running run_atlas (--nthreads 4)
[2025-07-28 09:45:01] Arguments: --nthreads 4
[2025-07-28 09:45:01] Threads: 4
[2025-07-28 09:45:01] This job has been restarted, cleaning up previous attempt
[2025-07-28 09:45:01] Checking for CVMFS
[2025-07-28 09:45:01] No cvmfs_config command found, will try listing directly
[2025-07-28 09:45:01] CVMFS is ok
[2025-07-28 09:45:01] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-28 09:45:01] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-28 09:45:01] Further information can be found at the LHC@home message board.
[2025-07-28 09:45:01] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-28 09:45:01] Checking for apptainer binary...
[2025-07-28 09:45:01] which: no apptainer in ((null))
[2025-07-28 09:45:01] apptainer is not installed, using version from CVMFS
[2025-07-28 09:45:01] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-28 09:45:01] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot60/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut11.grid.cesnet.cz
[2025-07-28 09:45:01] apptainer works
[2025-07-28 09:45:01] Set ATHENA_PROC_NUMBER=4
[2025-07-28 09:45:01] Set ATHENA_CORE_NUMBER=4
[2025-07-28 09:45:01] Starting ATLAS job with PandaID=6745058368
[2025-07-28 09:45:01] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot60/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-28 12:50:15]  *** The last 200 lines of the pilot log: ***
[2025-07-28 12:50:15] 2025-07-28 10:49:39,532 | INFO     | monitor loop #764: job 0:6745058368 is in state 'finished'
[2025-07-28 12:50:15] 2025-07-28 10:49:39,532 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-28 12:50:15] 2025-07-28 10:49:41,060 | INFO     | CPU arch script returned: x86-64-v3
[2025-07-28 12:50:15] 2025-07-28 10:49:41,080 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 2737.279343750001
[2025-07-28 12:50:15] 2025-07-28 10:49:41,104 | INFO     | using path: /scratch/boinc/var/slot60/slots/0/PanDA_Pilot-6745058368/memory_monitor_summary.json (trf name=prmon)
[2025-07-28 12:50:15] 2025-07-28 10:49:41,104 | INFO     | extracted standard info from prmon json
[2025-07-28 12:50:15] 2025-07-28 10:49:41,105 | INFO     | extracted standard memory fields from prmon json
[2025-07-28 12:50:15] 2025-07-28 10:49:41,105 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-28 12:50:15] 2025-07-28 10:49:41,105 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-28 12:50:15] 2025-07-28 10:49:41,105 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-28 12:50:15] 2025-07-28 10:49:41,109 | INFO     | fitting pss+swap vs Time
[2025-07-28 12:50:15] 2025-07-28 10:49:41,109 | INFO     | sum of square deviations: 1838657730.0
[2025-07-28 12:50:15] 2025-07-28 10:49:41,110 | INFO     | sum of deviations: 23657434739.0
[2025-07-28 12:50:15] 2025-07-28 10:49:41,110 | INFO     | mean x: 1753694239.0
[2025-07-28 12:50:15] 2025-07-28 10:49:41,110 | INFO     | mean y: 2304335.414364641
[2025-07-28 12:50:15] 2025-07-28 10:49:41,110 | INFO     | -- intersect: -22561931701.76411
[2025-07-28 12:50:15] 2025-07-28 10:49:41,111 | INFO     | intersect: -22561931701.76411
[2025-07-28 12:50:15] 2025-07-28 10:49:41,111 | INFO     | chi2: 1.4354419153643088
[2025-07-28 12:50:15] 2025-07-28 10:49:41,111 | INFO     | sum of square deviations: 1690450300.0
[2025-07-28 12:50:15] 2025-07-28 10:49:41,112 | INFO     | sum of deviations: 22982313335.0
[2025-07-28 12:50:15] 2025-07-28 10:49:41,112 | INFO     | mean x: 1753694086.5
[2025-07-28 12:50:15] 2025-07-28 10:49:41,113 | INFO     | mean y: 2303640.7045454546
[2025-07-28 12:50:15] 2025-07-28 10:49:41,113 | INFO     | -- intersect: -23839832972.05455
[2025-07-28 12:50:15] 2025-07-28 10:49:41,113 | INFO     | intersect: -23839832972.05455
[2025-07-28 12:50:15] 2025-07-28 10:49:41,113 | INFO     | chi2: 1.4364218483113234
[2025-07-28 12:50:15] 2025-07-28 10:49:41,113 | INFO     | current chi2=1.4364218483113234 (change=-0.0682669870877981 %)
[2025-07-28 12:50:15] 2025-07-28 10:49:41,113 | INFO     | right removable region: 175
[2025-07-28 12:50:15] 2025-07-28 10:49:41,114 | INFO     | sum of square deviations: 1690450300.0
[2025-07-28 12:50:15] 2025-07-28 10:49:41,115 | INFO     | sum of deviations: -798807870.9999995
[2025-07-28 12:50:15] 2025-07-28 10:49:41,115 | INFO     | mean x: 1753694391.5
[2025-07-28 12:50:15] 2025-07-28 10:49:41,115 | INFO     | mean y: 2329147.602272727
[2025-07-28 12:50:15] 2025-07-28 10:49:41,115 | INFO     | -- intersect: 831022474.6162374
[2025-07-28 12:50:15] 2025-07-28 10:49:41,115 | INFO     | intersect: 831022474.6162374
[2025-07-28 12:50:15] 2025-07-28 10:49:41,115 | INFO     | chi2: 0.001961739290719137
[2025-07-28 12:50:15] 2025-07-28 10:49:41,116 | INFO     | current chi2=0.001961739290719137 (change=99.86333551572365 %)
[2025-07-28 12:50:15] 2025-07-28 10:49:41,116 | INFO     | sum of square deviations: 1550429070.0
[2025-07-28 12:50:15] 2025-07-28 10:49:41,117 | INFO     | sum of deviations: -1060211414.9999996
[2025-07-28 12:50:15] 2025-07-28 10:49:41,117 | INFO     | mean x: 1753694544.0
[2025-07-28 12:50:15] 2025-07-28 10:49:41,117 | INFO     | mean y: 2329430.0467836256
[2025-07-28 12:50:15] 2025-07-28 10:49:41,117 | INFO     | -- intersect: 1201537449.2643409
[2025-07-28 12:50:15] 2025-07-28 10:49:41,117 | INFO     | intersect: 1201537449.2643409
[2025-07-28 12:50:15] 2025-07-28 10:49:41,118 | INFO     | chi2: 0.0017744608389592704
[2025-07-28 12:50:15] 2025-07-28 10:49:41,118 | INFO     | current chi2=0.0017744608389592704 (change=9.546551503855216 %)
[2025-07-28 12:50:15] 2025-07-28 10:49:41,118 | INFO     | left removable region: 20
[2025-07-28 12:50:15] 2025-07-28 10:49:41,118 | INFO     | sum of square deviations: 1154663510.0
[2025-07-28 12:50:15] 2025-07-28 10:49:41,119 | INFO     | sum of deviations: -504252901.00000036
[2025-07-28 12:50:15] 2025-07-28 10:49:41,119 | INFO     | mean x: 1753694666.0
[2025-07-28 12:50:15] 2025-07-28 10:49:41,119 | INFO     | mean y: 2328757.2193548386
[2025-07-28 12:50:15] 2025-07-28 10:49:41,119 | INFO     | -- intersect: 768184450.3630021
[2025-07-28 12:50:15] 2025-07-28 10:49:41,119 | INFO     | intersect: 768184450.3630021
[2025-07-28 12:50:15] 2025-07-28 10:49:41,120 | INFO     | chi2: 0.0015714283860474734
[2025-07-28 12:50:15] 2025-07-28 10:49:41,120 | INFO     | -- intersect: 768184450.3630021
[2025-07-28 12:50:15] 2025-07-28 10:49:41,120 | INFO     | current memory leak: -0.44 B/s (using 155 data points, chi2=0.00)
[2025-07-28 12:50:15] 2025-07-28 10:49:41,120 | INFO     | could have reported an average CPU frequency of 2737 MHz (10 samples)
[2025-07-28 12:50:15] 2025-07-28 10:49:41,121 | INFO     | ..............................
[2025-07-28 12:50:15] 2025-07-28 10:49:41,121 | INFO     | . Timing measurements:
[2025-07-28 12:50:15] 2025-07-28 10:49:41,121 | INFO     | . get job = 0 s
[2025-07-28 12:50:15] 2025-07-28 10:49:41,121 | INFO     | . initial setup = 1 s
[2025-07-28 12:50:15] 2025-07-28 10:49:41,121 | INFO     | . payload setup = 10 s
[2025-07-28 12:50:15] 2025-07-28 10:49:41,121 | INFO     | . stage-in = 0 s
[2025-07-28 12:50:15] 2025-07-28 10:49:41,121 | INFO     | . payload execution = 11024 s
[2025-07-28 12:50:15] 2025-07-28 10:49:41,121 | INFO     | . stage-out = 1 s
[2025-07-28 12:50:15] 2025-07-28 10:49:41,121 | INFO     | . log creation = 0 s
[2025-07-28 12:50:15] 2025-07-28 10:49:41,121 | INFO     | ..............................
[2025-07-28 12:50:15] 2025-07-28 10:49:41,221 | INFO     | 
[2025-07-28 12:50:15] 2025-07-28 10:49:41,221 | INFO     | job summary report
[2025-07-28 12:50:15] 2025-07-28 10:49:41,221 | INFO     | --------------------------------------------------
[2025-07-28 12:50:15] 2025-07-28 10:49:41,221 | INFO     | PanDA job id: 6745058368
[2025-07-28 12:50:15] 2025-07-28 10:49:41,221 | INFO     | task id: 45743349
[2025-07-28 12:50:15] 2025-07-28 10:49:41,221 | INFO     | errors: (none)
[2025-07-28 12:50:15] 2025-07-28 10:49:41,221 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-28 12:50:15] 2025-07-28 10:49:41,221 | INFO     | pilot state: finished 
[2025-07-28 12:50:15] 2025-07-28 10:49:41,221 | INFO     | transexitcode: 0
[2025-07-28 12:50:15] 2025-07-28 10:49:41,222 | INFO     | exeerrorcode: 0
[2025-07-28 12:50:15] 2025-07-28 10:49:41,222 | INFO     | exeerrordiag: 
[2025-07-28 12:50:15] 2025-07-28 10:49:41,222 | INFO     | exitcode: 0
[2025-07-28 12:50:15] 2025-07-28 10:49:41,222 | INFO     | exitmsg: OK
[2025-07-28 12:50:15] 2025-07-28 10:49:41,222 | INFO     | cpuconsumptiontime: 43032 s
[2025-07-28 12:50:15] 2025-07-28 10:49:41,222 | INFO     | nevents: 400
[2025-07-28 12:50:15] 2025-07-28 10:49:41,222 | INFO     | neventsw: 0
[2025-07-28 12:50:15] 2025-07-28 10:49:41,222 | INFO     | pid: 2166723
[2025-07-28 12:50:15] 2025-07-28 10:49:41,222 | INFO     | pgrp: 2166723
[2025-07-28 12:50:15] 2025-07-28 10:49:41,222 | INFO     | corecount: 4
[2025-07-28 12:50:15] 2025-07-28 10:49:41,222 | INFO     | event service: False
[2025-07-28 12:50:15] 2025-07-28 10:49:41,222 | INFO     | sizes: {0: 2397484, 1: 2397484, 7: 2397774, 11: 2397802, 11039: 2427553, 11041: 2436573, 11042: 2436757, 11049: 2436951}
[2025-07-28 12:50:15] 2025-07-28 10:49:41,223 | INFO     | --------------------------------------------------
[2025-07-28 12:50:15] 2025-07-28 10:49:41,223 | INFO     | 
[2025-07-28 12:50:15] 2025-07-28 10:49:41,223 | INFO     | executing command: ls -lF /scratch/boinc/var/slot60/slots/0
[2025-07-28 12:50:15] 2025-07-28 10:49:41,250 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-28 12:50:15] 2025-07-28 10:49:41,250 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-28 12:50:15] 2025-07-28 10:49:41,250 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-28 12:50:15] 2025-07-28 10:49:41,250 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-28 12:50:15] 2025-07-28 10:49:41,250 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-28 12:50:15] 2025-07-28 10:49:41,251 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-28 12:50:15] 2025-07-28 10:49:41,251 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-28 12:50:15] 2025-07-28 10:49:41,251 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-28 12:50:15] 2025-07-28 10:49:41,251 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-28 12:50:15] 2025-07-28 10:49:41,251 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-28 12:50:15] 2025-07-28 10:49:41,251 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-28 12:50:15] 2025-07-28 10:49:41,251 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-28 12:50:15] 2025-07-28 10:49:41,251 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-28 12:50:15] 2025-07-28 10:49:41,251 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-28 12:50:15] 2025-07-28 10:49:41,251 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-28 12:50:15] 2025-07-28 10:49:41,251 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-28 12:50:15] 2025-07-28 10:49:41,252 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-28 12:50:15] 2025-07-28 10:49:41,252 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-28 12:50:15] 2025-07-28 10:49:41,252 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-28 12:50:15] 2025-07-28 10:49:41,252 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-28 12:50:15] 2025-07-28 10:49:41,252 | INFO     | job 6745058368 has completed (purged errors)
[2025-07-28 12:50:15] 2025-07-28 10:49:41,252 | INFO     | overall cleanup function is called
[2025-07-28 12:50:15] 2025-07-28 10:49:42,261 | INFO     | --- collectZombieJob: --- 10, [2166723]
[2025-07-28 12:50:15] 2025-07-28 10:49:42,261 | INFO     | zombie collector waiting for pid 2166723
[2025-07-28 12:50:15] 2025-07-28 10:49:42,261 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-28 12:50:15] 2025-07-28 10:49:42,264 | INFO     | collected zombie processes
[2025-07-28 12:50:15] 2025-07-28 10:49:42,264 | INFO     | will attempt to kill all subprocesses of pid=2166723
[2025-07-28 12:50:15] 2025-07-28 10:49:43,007 | INFO     | process IDs to be killed: [2166723] (in reverse order)
[2025-07-28 12:50:15] 2025-07-28 10:49:43,281 | WARNING  | found no corresponding commands to process id(s)
[2025-07-28 12:50:15] 2025-07-28 10:49:43,282 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-28 12:50:15] 2025-07-28 10:49:43,308 | INFO     | did not find any defunct processes belonging to 2166723
[2025-07-28 12:50:15] 2025-07-28 10:49:43,331 | INFO     | did not find any defunct processes belonging to 2166723
[2025-07-28 12:50:15] 2025-07-28 10:49:43,331 | INFO     | ready for new job
[2025-07-28 12:50:15] 2025-07-28 10:49:43,331 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-28 12:50:15] 2025-07-28 10:49:43,333 | INFO     | ***************************************
[2025-07-28 12:50:15] 2025-07-28 10:49:43,334 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-28 12:50:15] 2025-07-28 10:49:43,334 | INFO     | ***************************************
[2025-07-28 12:50:15] 2025-07-28 10:49:43,334 | INFO     | 
[2025-07-28 12:50:15] 2025-07-28 10:49:43,342 | INFO     | architecture information:
[2025-07-28 12:50:15] 2025-07-28 10:49:43,343 | INFO     | executing command: cat /etc/os-release
[2025-07-28 12:50:15] 2025-07-28 10:49:43,369 | INFO     | cat /etc/os-release:
[2025-07-28 12:50:15] NAME="CentOS Linux"
[2025-07-28 12:50:15] VERSION="7 (Core)"
[2025-07-28 12:50:15] ID="centos"
[2025-07-28 12:50:15] ID_LIKE="rhel fedora"
[2025-07-28 12:50:15] VERSION_ID="7"
[2025-07-28 12:50:15] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-28 12:50:15] ANSI_COLOR="0;31"
[2025-07-28 12:50:15] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-28 12:50:15] HOME_URL="https://www.centos.org/"
[2025-07-28 12:50:15] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-28 12:50:15] 
[2025-07-28 12:50:15] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-28 12:50:15] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-28 12:50:15] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-28 12:50:15] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-28 12:50:15] 
[2025-07-28 12:50:15] 2025-07-28 10:49:43,370 | INFO     | ***************************************
[2025-07-28 12:50:15] 2025-07-28 10:49:43,872 | INFO     | executing command: df -mP /scratch/boinc/var/slot60/slots/0
[2025-07-28 12:50:15] 2025-07-28 10:49:43,892 | INFO     | sufficient remaining disk space (3289920831488 B)
[2025-07-28 12:50:15] 2025-07-28 10:49:43,893 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-28 12:50:15] 2025-07-28 10:49:43,893 | INFO     | current server update state: UPDATING_FINAL
[2025-07-28 12:50:15] 2025-07-28 10:49:43,893 | INFO     | update_server=False
[2025-07-28 12:50:15] 2025-07-28 10:49:43,893 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-28 12:50:15] 2025-07-28 10:49:43,893 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-28 12:50:15] 2025-07-28 10:49:43,894 | INFO     | aborting loop
[2025-07-28 12:50:15] 2025-07-28 10:49:43,894 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-28 12:50:15] 2025-07-28 10:49:44,061 | INFO     | all payload control threads have been joined
[2025-07-28 12:50:15] 2025-07-28 10:49:44,381 | INFO     | all data control threads have been joined
[2025-07-28 12:50:15] 2025-07-28 10:49:44,699 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-28 12:50:15] 2025-07-28 10:49:44,898 | INFO     | [job] retrieve thread has finished
[2025-07-28 12:50:15] 2025-07-28 10:49:44,899 | INFO     | [job] job monitor thread has finished
[2025-07-28 12:50:15] 2025-07-28 10:49:44,996 | INFO     | [payload] execute_payloads thread has finished
[2025-07-28 12:50:15] 2025-07-28 10:49:45,066 | INFO     | [payload] control thread has finished
[2025-07-28 12:50:15] 2025-07-28 10:49:45,273 | INFO     | [payload] validate_pre thread has finished
[2025-07-28 12:50:15] 2025-07-28 10:49:45,286 | INFO     | all job control threads have been joined
[2025-07-28 12:50:15] 2025-07-28 10:49:45,386 | INFO     | [data] control thread has finished
[2025-07-28 12:50:15] 2025-07-28 10:49:45,522 | INFO     | [data] copytool_in thread has finished
[2025-07-28 12:50:15] 2025-07-28 10:49:45,900 | INFO     | [data] copytool_out thread has finished
[2025-07-28 12:50:15] 2025-07-28 10:49:46,004 | INFO     | [payload] validate_post thread has finished
[2025-07-28 12:50:15] 2025-07-28 10:49:46,118 | INFO     | [payload] failed_post thread has finished
[2025-07-28 12:50:15] 2025-07-28 10:49:46,177 | INFO     | [job] validate thread has finished
[2025-07-28 12:50:15] 2025-07-28 10:49:46,230 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-28 12:50:15] 2025-07-28 10:49:46,292 | INFO     | [job] control thread has finished
[2025-07-28 12:50:15] 2025-07-28 10:49:46,293 | INFO     | [job] create_data_payload thread has finished
[2025-07-28 12:50:15] 2025-07-28 10:49:47,235 | INFO     | [job] queue monitor thread has finished
[2025-07-28 12:50:15] 2025-07-28 10:49:48,705 | INFO     | [data] queue_monitor thread has finished
[2025-07-28 12:50:15] 2025-07-28 10:49:54,185 | INFO     | job.realtimelogging is not enabled
[2025-07-28 12:50:15] 2025-07-28 10:49:55,190 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-28 12:50:15] 2025-07-28 10:49:55,888 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22892260681536)>', '<ExcThread(monitor, started 22892020455168)>']
[2025-07-28 12:50:15] 2025-07-28 10:50:00,913 | INFO     | all workflow threads have been joined
[2025-07-28 12:50:15] 2025-07-28 10:50:00,913 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-28 12:50:15] 2025-07-28 10:50:00,913 | INFO     | traces error code: 0
[2025-07-28 12:50:15] 2025-07-28 10:50:00,914 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-28 12:50:15] 2025-07-28 10:50:14,711 | INFO     | PID=2151182 has CPU usage=9.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-28 12:50:15] 2025-07-28 10:50:14,712 | INFO     | .. there are 26 such processes running
[2025-07-28 12:50:15] 2025-07-28 10:50:14,714 | INFO     | found 0 job(s) in 20 queues
[2025-07-28 12:50:15] 2025-07-28 10:50:14,715 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-28 12:50:15] 2025-07-28 10:50:14,715 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-28 12:50:15] 2025-07-28 10:50:14,715 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-28 12:50:15] 2025-07-28 10:50:14,715 | CRITICAL | thread 'MainThread' is not alive
[2025-07-28 12:50:15] 2025-07-28 10:50:14,715 | INFO     | [monitor] control thread has ended
[2025-07-28 12:50:15] 2025-07-28 10:50:14,895 [wrapper] ==== pilot stdout END ====
[2025-07-28 12:50:15] 2025-07-28 10:50:14,900 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-28 12:50:15] 2025-07-28 10:50:14,904 [wrapper] pilotpid: 2151182
[2025-07-28 12:50:15] 2025-07-28 10:50:14,907 [wrapper] Pilot exit status: 0
[2025-07-28 12:50:15] 2025-07-28 10:50:14,923 [wrapper] pandaids: 6745058368 6745058368
[2025-07-28 12:50:15] 2025-07-28 10:50:15,077 [wrapper] cleanup supervisor_pilot 3236582 2151183
[2025-07-28 12:50:15] 2025-07-28 10:50:15,083 [wrapper] Test setup, not cleaning
[2025-07-28 12:50:15] 2025-07-28 10:50:15,088 [wrapper] apfmon messages muted
[2025-07-28 12:50:15] 2025-07-28 10:50:15,092 [wrapper] ==== wrapper stdout END ====
[2025-07-28 12:50:15] 2025-07-28 10:50:15,096 [wrapper] ==== wrapper stderr END ====
[2025-07-28 12:50:15]  *** Error codes and diagnostics ***
[2025-07-28 12:50:15]     "exeErrorCode": 0,
[2025-07-28 12:50:15]     "exeErrorDiag": "",
[2025-07-28 12:50:15]     "pilotErrorCode": 0,
[2025-07-28 12:50:15]     "pilotErrorDiag": "",
[2025-07-28 12:50:15]  *** Listing of results directory ***
[2025-07-28 12:50:15] total 496680
[2025-07-28 12:50:15] drwx------ 4 boinc boinc      4096 Jun 17 12:04 pilot3
[2025-07-28 12:50:15] -rw-r--r-- 1 boinc boinc    530466 Jul 25 18:23 pilot3.tar.gz
[2025-07-28 12:50:15] -rwx------ 1 boinc boinc     36292 Jul 25 18:38 runpilot2-wrapper.sh
[2025-07-28 12:50:15] -rw-r--r-- 1 boinc boinc      5112 Jul 25 18:38 queuedata.json
[2025-07-28 12:50:15] -rw-r--r-- 1 boinc boinc       100 Jul 28 06:51 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-28 12:50:15] -rwxr-xr-x 1 boinc boinc      7986 Jul 28 06:51 run_atlas
[2025-07-28 12:50:15] -rw-r--r-- 1 boinc boinc       105 Jul 28 06:51 job.xml
[2025-07-28 12:50:15] -rw-r--r-- 3 boinc boinc 147733908 Jul 28 06:51 EVNT.45743347._001348.pool.root.1
[2025-07-28 12:50:15] -rw-r--r-- 3 boinc boinc 147733908 Jul 28 06:51 ATLAS.root_0
[2025-07-28 12:50:15] -rw-r--r-- 2 boinc boinc     15095 Jul 28 06:51 start_atlas.sh
[2025-07-28 12:50:15] drwxrwx--x 2 boinc boinc      4096 Jul 28 06:51 shared
[2025-07-28 12:50:15] -rw-r--r-- 2 boinc boinc    542900 Jul 28 06:51 input.tar.gz
[2025-07-28 12:50:15] -rw-r--r-- 1 boinc boinc         0 Jul 28 06:51 boinc_lockfile
[2025-07-28 12:50:15] -rw-r--r-- 1 boinc boinc      6694 Jul 28 09:45 init_data.xml
[2025-07-28 12:50:15] -rw-r--r-- 1 boinc boinc      2562 Jul 28 09:45 pandaJob.out
[2025-07-28 12:50:15] -rw------- 1 boinc boinc    978452 Jul 28 09:45 agis_schedconf.cvmfs.json
[2025-07-28 12:50:15] -rw------- 1 boinc boinc 206591225 Jul 28 12:48 HITS.45743349._023813.pool.root.1
[2025-07-28 12:50:15] -rw-r--r-- 1 boinc boinc       530 Jul 28 12:49 boinc_task_state.xml
[2025-07-28 12:50:15] -rw------- 1 boinc boinc      1043 Jul 28 12:49 memory_monitor_summary.json
[2025-07-28 12:50:15] -rw------- 1 boinc boinc   1593052 Jul 28 12:49 agis_ddmendpoints.agis.ALL.json
[2025-07-28 12:50:15] -rw------- 1 boinc boinc    299221 Jul 28 12:49 log.45743349._023813.job.log.tgz.1
[2025-07-28 12:50:15] -rw------- 1 boinc boinc      7785 Jul 28 12:49 heartbeat.json
[2025-07-28 12:50:15] -rw-r--r-- 1 boinc boinc      8192 Jul 28 12:50 boinc_mmap_file
[2025-07-28 12:50:15] -rw-r--r-- 1 boinc boinc        28 Jul 28 12:50 wrapper_checkpoint.txt
[2025-07-28 12:50:15] -rw------- 1 boinc boinc        97 Jul 28 12:50 pilot_heartbeat.json
[2025-07-28 12:50:15] -rw------- 1 boinc boinc       893 Jul 28 12:50 pilotlog.txt
[2025-07-28 12:50:15] -rw------- 1 boinc boinc   1030336 Jul 28 12:50 log.45743349._023813.job.log.1
[2025-07-28 12:50:15] -rw------- 1 boinc boinc       357 Jul 28 12:50 output.list
[2025-07-28 12:50:15] -rw-r--r-- 1 boinc boinc       620 Jul 28 12:50 runtime_log
[2025-07-28 12:50:15] -rw------- 1 boinc boinc   1351680 Jul 28 12:50 result.tar.gz
[2025-07-28 12:50:15] -rw-r--r-- 1 boinc boinc      9104 Jul 28 12:50 runtime_log.err
[2025-07-28 12:50:15] -rw------- 1 boinc boinc       790 Jul 28 12:50 ZGQODmzbaz7n9Rq4apOajLDm4fhM0noT9bVof3QYDmQEzKDmadKHam.diag
[2025-07-28 12:50:15] -rw-r--r-- 1 boinc boinc     22827 Jul 28 12:50 stderr.txt
[2025-07-28 12:50:15] HITS file was successfully produced:
[2025-07-28 12:50:15] -rw------- 1 boinc boinc 206591225 Jul 28 12:48 shared/HITS.pool.root.1
[2025-07-28 12:50:15]  *** Contents of shared directory: ***
[2025-07-28 12:50:15] total 347900
[2025-07-28 12:50:15] -rw-r--r-- 3 boinc boinc 147733908 Jul 28 06:51 ATLAS.root_0
[2025-07-28 12:50:15] -rw-r--r-- 2 boinc boinc     15095 Jul 28 06:51 start_atlas.sh
[2025-07-28 12:50:15] -rw-r--r-- 2 boinc boinc    542900 Jul 28 06:51 input.tar.gz
[2025-07-28 12:50:15] -rw------- 1 boinc boinc 206591225 Jul 28 12:48 HITS.pool.root.1
[2025-07-28 12:50:15] -rw------- 1 boinc boinc   1351680 Jul 28 12:50 result.tar.gz
12:50:16 (2144078): run_atlas exited; CPU time 43657.728652
12:50:16 (2144078): called boinc_finish(0)

</stderr_txt>
]]>

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