Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
21:34:02 (2009007): wrapper (7.7.26015): starting
21:34:02 (2009007): wrapper: running run_atlas (--nthreads 12)
[2025-07-25 21:34:02] Arguments: --nthreads 12
[2025-07-25 21:34:02] Threads: 12
[2025-07-25 21:34:02] Checking for CVMFS
[2025-07-25 21:34:02] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-25 21:34:02] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-25 21:34:02] Running cvmfs_config stat atlas.cern.ch
[2025-07-25 21:34:03] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-25 21:34:03] 2.13.1.0 130249 4603 122044 148759 0 349 28066888 40960000 8802 16776704 0 5360125 99.723 8114028 31375 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-07-25 21:34:03] CVMFS is ok
[2025-07-25 21:34:03] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-25 21:34:03] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-25 21:34:03] Further information can be found at the LHC@home message board.
[2025-07-25 21:34:03] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-25 21:34:03] Checking for apptainer binary...
[2025-07-25 21:34:03] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-25 21:34:03] Running /usr/bin/apptainer --version
[2025-07-25 21:34:03] apptainer version 1.4.1-1.el9
[2025-07-25 21:34:03] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-25 21:34:03] c-211-6.aglt2.org
[2025-07-25 21:34:03] apptainer works
[2025-07-25 21:34:03] Set ATHENA_PROC_NUMBER=12
[2025-07-25 21:34:03] Set ATHENA_CORE_NUMBER=12
[2025-07-25 21:34:03] Starting ATLAS job with PandaID=6745058579
[2025-07-25 21:34:03] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-26 01:40:22]  *** The last 200 lines of the pilot log: ***
[2025-07-26 01:40:22] 2025-07-26 05:39:47,652 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-26 01:40:22] 2025-07-26 05:39:47,896 | INFO     | PID=2012584 has CPU usage=14.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-07-26 01:40:22] 2025-07-26 05:39:47,897 | INFO     | .. there are 7 such processes running
[2025-07-26 01:40:22] 2025-07-26 05:39:48,012 | INFO     | CPU arch script returned: x86-64-v3
[2025-07-26 01:40:22] 2025-07-26 05:39:48,019 | INFO     | found 24 cores (12 cores per socket, 2 sockets) HT, CPU MHz: 2441.8066458333333
[2025-07-26 01:40:22] 2025-07-26 05:39:48,025 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6745058579/memory_monitor_summary.json (trf name=prmon)
[2025-07-26 01:40:22] 2025-07-26 05:39:48,026 | INFO     | extracted standard info from prmon json
[2025-07-26 01:40:22] 2025-07-26 05:39:48,026 | INFO     | extracted standard memory fields from prmon json
[2025-07-26 01:40:22] 2025-07-26 05:39:48,026 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-26 01:40:22] 2025-07-26 05:39:48,026 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-26 01:40:22] 2025-07-26 05:39:48,027 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-26 01:40:22] 2025-07-26 05:39:48,030 | INFO     | fitting pss+swap vs Time
[2025-07-26 01:40:22] 2025-07-26 05:39:48,030 | INFO     | sum of square deviations: 4341321887.195042
[2025-07-26 01:40:22] 2025-07-26 05:39:48,031 | INFO     | sum of deviations: -9376975644.69711
[2025-07-26 01:40:22] 2025-07-26 05:39:48,032 | INFO     | mean x: 1753501013.107884
[2025-07-26 01:40:22] 2025-07-26 05:39:48,032 | INFO     | mean y: 2759266.1037344397
[2025-07-26 01:40:22] 2025-07-26 05:39:48,032 | INFO     | -- intersect: 3790208508.5481763
[2025-07-26 01:40:22] 2025-07-26 05:39:48,032 | INFO     | intersect: 3790208508.5481763
[2025-07-26 01:40:22] 2025-07-26 05:39:48,032 | INFO     | chi2: 1.8755527629661186
[2025-07-26 01:40:22] 2025-07-26 05:39:48,032 | INFO     | sum of square deviations: 4076807155.186425
[2025-07-26 01:40:22] 2025-07-26 05:39:48,034 | INFO     | sum of deviations: -8343370281.864401
[2025-07-26 01:40:22] 2025-07-26 05:39:48,034 | INFO     | mean x: 1753500860.6271186
[2025-07-26 01:40:22] 2025-07-26 05:39:48,034 | INFO     | mean y: 2759856.2288135593
[2025-07-26 01:40:22] 2025-07-26 05:39:48,034 | INFO     | -- intersect: 3591378697.610077
[2025-07-26 01:40:22] 2025-07-26 05:39:48,034 | INFO     | intersect: 3591378697.610077
[2025-07-26 01:40:22] 2025-07-26 05:39:48,034 | INFO     | chi2: 1.8754330569540065
[2025-07-26 01:40:22] 2025-07-26 05:39:48,034 | INFO     | current chi2=1.8754330569540065 (change=0.006382439058807154 %)
[2025-07-26 01:40:22] 2025-07-26 05:39:48,034 | INFO     | right removable region: 235
[2025-07-26 01:40:22] 2025-07-26 05:39:48,035 | INFO     | sum of square deviations: 4076658740.9279733
[2025-07-26 01:40:22] 2025-07-26 05:39:48,036 | INFO     | sum of deviations: -53170569694.8093
[2025-07-26 01:40:22] 2025-07-26 05:39:48,036 | INFO     | mean x: 1753501165.631356
[2025-07-26 01:40:22] 2025-07-26 05:39:48,036 | INFO     | mean y: 2784296.622881356
[2025-07-26 01:40:22] 2025-07-26 05:39:48,036 | INFO     | -- intersect: 22873145016.565872
[2025-07-26 01:40:22] 2025-07-26 05:39:48,036 | INFO     | intersect: 22873145016.565872
[2025-07-26 01:40:22] 2025-07-26 05:39:48,037 | INFO     | chi2: 0.2948404179848255
[2025-07-26 01:40:22] 2025-07-26 05:39:48,037 | INFO     | current chi2=0.2948404179848255 (change=84.27981212757 %)
[2025-07-26 01:40:22] 2025-07-26 05:39:48,037 | INFO     | sum of square deviations: 3822972544.389606
[2025-07-26 01:40:22] 2025-07-26 05:39:48,038 | INFO     | sum of deviations: -53189897013.25979
[2025-07-26 01:40:22] 2025-07-26 05:39:48,038 | INFO     | mean x: 1753501318.1558442
[2025-07-26 01:40:22] 2025-07-26 05:39:48,038 | INFO     | mean y: 2784259.5627705627
[2025-07-26 01:40:22] 2025-07-26 05:39:48,039 | INFO     | -- intersect: 24399651734.376495
[2025-07-26 01:40:22] 2025-07-26 05:39:48,039 | INFO     | intersect: 24399651734.376495
[2025-07-26 01:40:22] 2025-07-26 05:39:48,039 | INFO     | chi2: 0.26082212673482036
[2025-07-26 01:40:22] 2025-07-26 05:39:48,039 | INFO     | current chi2=0.26082212673482036 (change=11.53786562999513 %)
[2025-07-26 01:40:22] 2025-07-26 05:39:48,039 | INFO     | left removable region: 20
[2025-07-26 01:40:22] 2025-07-26 05:39:48,040 | INFO     | sum of square deviations: 3082388725.832563
[2025-07-26 01:40:22] 2025-07-26 05:39:48,041 | INFO     | sum of deviations: -28032369753.35816
[2025-07-26 01:40:22] 2025-07-26 05:39:48,041 | INFO     | mean x: 1753501440.227907
[2025-07-26 01:40:22] 2025-07-26 05:39:48,042 | INFO     | mean y: 2769968.2930232557
[2025-07-26 01:40:22] 2025-07-26 05:39:48,042 | INFO     | -- intersect: 15949753008.933975
[2025-07-26 01:40:22] 2025-07-26 05:39:48,042 | INFO     | intersect: 15949753008.933975
[2025-07-26 01:40:22] 2025-07-26 05:39:48,042 | INFO     | chi2: 0.17651260682848113
[2025-07-26 01:40:22] 2025-07-26 05:39:48,042 | INFO     | -- intersect: 15949753008.933975
[2025-07-26 01:40:22] 2025-07-26 05:39:48,043 | INFO     | current memory leak: -9.09 B/s (using 215 data points, chi2=0.18)
[2025-07-26 01:40:22] 2025-07-26 05:39:48,043 | INFO     | could have reported an average CPU frequency of 2404 MHz (11 samples)
[2025-07-26 01:40:22] 2025-07-26 05:39:48,043 | INFO     | ..............................
[2025-07-26 01:40:22] 2025-07-26 05:39:48,044 | INFO     | . Timing measurements:
[2025-07-26 01:40:22] 2025-07-26 05:39:48,044 | INFO     | . get job = 0 s
[2025-07-26 01:40:22] 2025-07-26 05:39:48,044 | INFO     | . initial setup = 3 s
[2025-07-26 01:40:22] 2025-07-26 05:39:48,044 | INFO     | . payload setup = 10 s
[2025-07-26 01:40:22] 2025-07-26 05:39:48,044 | INFO     | . stage-in = 0 s
[2025-07-26 01:40:22] 2025-07-26 05:39:48,044 | INFO     | . payload execution = 14689 s
[2025-07-26 01:40:22] 2025-07-26 05:39:48,044 | INFO     | . stage-out = 2 s
[2025-07-26 01:40:22] 2025-07-26 05:39:48,044 | INFO     | . log creation = 0 s
[2025-07-26 01:40:22] 2025-07-26 05:39:48,045 | INFO     | ..............................
[2025-07-26 01:40:22] 2025-07-26 05:39:48,492 | INFO     | 
[2025-07-26 01:40:22] 2025-07-26 05:39:48,492 | INFO     | job summary report
[2025-07-26 01:40:22] 2025-07-26 05:39:48,493 | INFO     | --------------------------------------------------
[2025-07-26 01:40:22] 2025-07-26 05:39:48,493 | INFO     | PanDA job id: 6745058579
[2025-07-26 01:40:22] 2025-07-26 05:39:48,493 | INFO     | task id: 45743349
[2025-07-26 01:40:22] 2025-07-26 05:39:48,493 | INFO     | errors: (none)
[2025-07-26 01:40:22] 2025-07-26 05:39:48,493 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-26 01:40:22] 2025-07-26 05:39:48,493 | INFO     | pilot state: finished 
[2025-07-26 01:40:22] 2025-07-26 05:39:48,493 | INFO     | transexitcode: 0
[2025-07-26 01:40:22] 2025-07-26 05:39:48,493 | INFO     | exeerrorcode: 0
[2025-07-26 01:40:22] 2025-07-26 05:39:48,493 | INFO     | exeerrordiag: 
[2025-07-26 01:40:22] 2025-07-26 05:39:48,494 | INFO     | exitcode: 0
[2025-07-26 01:40:22] 2025-07-26 05:39:48,494 | INFO     | exitmsg: OK
[2025-07-26 01:40:22] 2025-07-26 05:39:48,494 | INFO     | cpuconsumptiontime: 70521 s
[2025-07-26 01:40:22] 2025-07-26 05:39:48,494 | INFO     | nevents: 400
[2025-07-26 01:40:22] 2025-07-26 05:39:48,494 | INFO     | neventsw: 0
[2025-07-26 01:40:22] 2025-07-26 05:39:48,494 | INFO     | pid: 2021744
[2025-07-26 01:40:22] 2025-07-26 05:39:48,494 | INFO     | pgrp: 2021744
[2025-07-26 01:40:22] 2025-07-26 05:39:48,494 | INFO     | corecount: 12
[2025-07-26 01:40:22] 2025-07-26 05:39:48,494 | INFO     | event service: False
[2025-07-26 01:40:22] 2025-07-26 05:39:48,495 | INFO     | sizes: {0: 2396643, 1: 2397499, 2: 2397499, 7: 2397789, 12: 2397817, 14703: 2428681, 14706: 2437679, 14707: 2437735, 14713: 2437929}
[2025-07-26 01:40:22] 2025-07-26 05:39:48,495 | INFO     | --------------------------------------------------
[2025-07-26 01:40:22] 2025-07-26 05:39:48,495 | INFO     | 
[2025-07-26 01:40:22] 2025-07-26 05:39:48,495 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-07-26 01:40:22] 2025-07-26 05:39:48,521 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-26 01:40:22] 2025-07-26 05:39:48,522 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-26 01:40:22] 2025-07-26 05:39:48,522 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-26 01:40:22] 2025-07-26 05:39:48,522 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-26 01:40:22] 2025-07-26 05:39:48,522 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-26 01:40:22] 2025-07-26 05:39:48,522 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-26 01:40:22] 2025-07-26 05:39:48,522 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-26 01:40:22] 2025-07-26 05:39:48,522 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-26 01:40:22] 2025-07-26 05:39:48,522 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-26 01:40:22] 2025-07-26 05:39:48,523 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-26 01:40:22] 2025-07-26 05:39:48,523 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-26 01:40:22] 2025-07-26 05:39:48,523 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-26 01:40:22] 2025-07-26 05:39:48,523 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-26 01:40:22] 2025-07-26 05:39:48,523 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-26 01:40:22] 2025-07-26 05:39:48,523 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-26 01:40:22] 2025-07-26 05:39:48,523 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-26 01:40:22] 2025-07-26 05:39:48,523 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-26 01:40:22] 2025-07-26 05:39:48,524 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-26 01:40:22] 2025-07-26 05:39:48,524 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-26 01:40:22] 2025-07-26 05:39:48,524 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-26 01:40:22] 2025-07-26 05:39:48,524 | INFO     | job 6745058579 has completed (purged errors)
[2025-07-26 01:40:22] 2025-07-26 05:39:48,524 | INFO     | overall cleanup function is called
[2025-07-26 01:40:22] 2025-07-26 05:39:49,534 | INFO     | --- collectZombieJob: --- 10, [2021744]
[2025-07-26 01:40:22] 2025-07-26 05:39:49,556 | INFO     | zombie collector waiting for pid 2021744
[2025-07-26 01:40:22] 2025-07-26 05:39:49,556 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-26 01:40:22] 2025-07-26 05:39:49,556 | INFO     | collected zombie processes
[2025-07-26 01:40:22] 2025-07-26 05:39:49,556 | INFO     | will attempt to kill all subprocesses of pid=2021744
[2025-07-26 01:40:22] 2025-07-26 05:39:49,836 | INFO     | process IDs to be killed: [2021744] (in reverse order)
[2025-07-26 01:40:22] 2025-07-26 05:39:49,918 | WARNING  | found no corresponding commands to process id(s)
[2025-07-26 01:40:22] 2025-07-26 05:39:49,920 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-26 01:40:22] 2025-07-26 05:39:49,928 | INFO     | did not find any defunct processes belonging to 2021744
[2025-07-26 01:40:22] 2025-07-26 05:39:49,937 | INFO     | did not find any defunct processes belonging to 2021744
[2025-07-26 01:40:22] 2025-07-26 05:39:49,938 | INFO     | ready for new job
[2025-07-26 01:40:22] 2025-07-26 05:39:49,938 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-26 01:40:22] 2025-07-26 05:39:49,940 | INFO     | ***************************************
[2025-07-26 01:40:22] 2025-07-26 05:39:49,940 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-26 01:40:22] 2025-07-26 05:39:49,940 | INFO     | ***************************************
[2025-07-26 01:40:22] 2025-07-26 05:39:49,940 | INFO     | 
[2025-07-26 01:40:22] 2025-07-26 05:39:49,944 | INFO     | architecture information:
[2025-07-26 01:40:22] 2025-07-26 05:39:49,944 | INFO     | executing command: cat /etc/os-release
[2025-07-26 01:40:22] 2025-07-26 05:39:49,963 | INFO     | cat /etc/os-release:
[2025-07-26 01:40:22] NAME="CentOS Linux"
[2025-07-26 01:40:22] VERSION="7 (Core)"
[2025-07-26 01:40:22] ID="centos"
[2025-07-26 01:40:22] ID_LIKE="rhel fedora"
[2025-07-26 01:40:22] VERSION_ID="7"
[2025-07-26 01:40:22] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-26 01:40:22] ANSI_COLOR="0;31"
[2025-07-26 01:40:22] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-26 01:40:22] HOME_URL="https://www.centos.org/"
[2025-07-26 01:40:22] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-26 01:40:22] 
[2025-07-26 01:40:22] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-26 01:40:22] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-26 01:40:22] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-26 01:40:22] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-26 01:40:22] 
[2025-07-26 01:40:22] 2025-07-26 05:39:49,964 | INFO     | ***************************************
[2025-07-26 01:40:22] 2025-07-26 05:39:50,467 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-07-26 01:40:22] 2025-07-26 05:39:50,490 | INFO     | sufficient remaining disk space (64705527808 B)
[2025-07-26 01:40:22] 2025-07-26 05:39:50,490 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-26 01:40:22] 2025-07-26 05:39:50,491 | INFO     | current server update state: UPDATING_FINAL
[2025-07-26 01:40:22] 2025-07-26 05:39:50,491 | INFO     | update_server=False
[2025-07-26 01:40:22] 2025-07-26 05:39:50,491 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-26 01:40:22] 2025-07-26 05:39:50,491 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-26 01:40:22] 2025-07-26 05:39:50,772 | INFO     | all data control threads have been joined
[2025-07-26 01:40:22] 2025-07-26 05:39:51,160 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-26 01:40:22] 2025-07-26 05:39:51,161 | INFO     | aborting loop
[2025-07-26 01:40:22] 2025-07-26 05:39:51,199 | INFO     | all job control threads have been joined
[2025-07-26 01:40:22] 2025-07-26 05:39:51,496 | INFO     | [job] retrieve thread has finished
[2025-07-26 01:40:22] 2025-07-26 05:39:51,552 | INFO     | [job] create_data_payload thread has finished
[2025-07-26 01:40:22] 2025-07-26 05:39:51,598 | INFO     | all payload control threads have been joined
[2025-07-26 01:40:22] 2025-07-26 05:39:51,777 | INFO     | [data] control thread has finished
[2025-07-26 01:40:22] 2025-07-26 05:39:51,787 | INFO     | [payload] validate_pre thread has finished
[2025-07-26 01:40:22] 2025-07-26 05:39:51,789 | INFO     | [job] validate thread has finished
[2025-07-26 01:40:22] 2025-07-26 05:39:52,057 | INFO     | [payload] failed_post thread has finished
[2025-07-26 01:40:22] 2025-07-26 05:39:52,166 | INFO     | [job] job monitor thread has finished
[2025-07-26 01:40:22] 2025-07-26 05:39:52,204 | INFO     | [job] control thread has finished
[2025-07-26 01:40:22] 2025-07-26 05:39:52,236 | INFO     | [payload] validate_post thread has finished
[2025-07-26 01:40:22] 2025-07-26 05:39:52,419 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-26 01:40:22] 2025-07-26 05:39:52,448 | INFO     | [data] copytool_in thread has finished
[2025-07-26 01:40:22] 2025-07-26 05:39:52,497 | INFO     | [data] copytool_out thread has finished
[2025-07-26 01:40:22] 2025-07-26 05:39:52,603 | INFO     | [payload] control thread has finished
[2025-07-26 01:40:22] 2025-07-26 05:39:52,830 | INFO     | [payload] execute_payloads thread has finished
[2025-07-26 01:40:22] 2025-07-26 05:39:53,178 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-26 01:40:22] 2025-07-26 05:39:54,183 | INFO     | [job] queue monitor thread has finished
[2025-07-26 01:40:22] 2025-07-26 05:39:56,425 | INFO     | [data] queue_monitor thread has finished
[2025-07-26 01:40:22] 2025-07-26 05:40:01,194 | INFO     | job.realtimelogging is not enabled
[2025-07-26 01:40:22] 2025-07-26 05:40:02,199 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-26 01:40:22] 2025-07-26 05:40:03,561 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140613206742848)>', '<ExcThread(monitor, started 140612556793600)>']
[2025-07-26 01:40:22] 2025-07-26 05:40:08,586 | INFO     | all workflow threads have been joined
[2025-07-26 01:40:22] 2025-07-26 05:40:08,586 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-26 01:40:22] 2025-07-26 05:40:08,587 | INFO     | traces error code: 0
[2025-07-26 01:40:22] 2025-07-26 05:40:08,587 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-26 01:40:22] 2025-07-26 05:40:20,349 | INFO     | PID=2012584 has CPU usage=2.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-26 01:40:22] 2025-07-26 05:40:20,349 | INFO     | .. there are 7 such processes running
[2025-07-26 01:40:22] 2025-07-26 05:40:20,350 | INFO     | found 0 job(s) in 20 queues
[2025-07-26 01:40:22] 2025-07-26 05:40:20,350 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-26 01:40:22] 2025-07-26 05:40:20,350 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-26 01:40:22] 2025-07-26 05:40:20,350 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-26 01:40:22] 2025-07-26 05:40:20,350 | INFO     | [monitor] control thread has ended
[2025-07-26 01:40:22] 2025-07-26 05:40:22,084 [wrapper] ==== pilot stdout END ====
[2025-07-26 01:40:22] 2025-07-26 05:40:22,088 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-26 01:40:22] 2025-07-26 05:40:22,091 [wrapper] pilotpid: 2012584
[2025-07-26 01:40:22] 2025-07-26 05:40:22,094 [wrapper] Pilot exit status: 0
[2025-07-26 01:40:22] 2025-07-26 05:40:22,153 [wrapper] pandaids: 6745058579
[2025-07-26 01:40:22] 2025-07-26 05:40:22,218 [wrapper] cleanup supervisor_pilot 2328752 2012585
[2025-07-26 01:40:22] 2025-07-26 05:40:22,222 [wrapper] Test setup, not cleaning
[2025-07-26 01:40:22] 2025-07-26 05:40:22,225 [wrapper] apfmon messages muted
[2025-07-26 01:40:22] 2025-07-26 05:40:22,229 [wrapper] ==== wrapper stdout END ====
[2025-07-26 01:40:22] 2025-07-26 05:40:22,233 [wrapper] ==== wrapper stderr END ====
[2025-07-26 01:40:22]  *** Error codes and diagnostics ***
[2025-07-26 01:40:22]     "exeErrorCode": 0,
[2025-07-26 01:40:22]     "exeErrorDiag": "",
[2025-07-26 01:40:22]     "pilotErrorCode": 0,
[2025-07-26 01:40:22]     "pilotErrorDiag": "",
[2025-07-26 01:40:22]  *** Listing of results directory ***
[2025-07-26 01:40:22] total 350608
[2025-07-26 01:40:22] -rw-r--r--. 1 boincer umatlas    530466 Jul 25 12:23 pilot3.tar.gz
[2025-07-26 01:40:22] -rw-r--r--. 1 boincer umatlas      5112 Jul 25 12:49 queuedata.json
[2025-07-26 01:40:22] -rwx------. 1 boincer umatlas     36292 Jul 25 12:49 runpilot2-wrapper.sh
[2025-07-26 01:40:22] -rw-r--r--. 1 boincer umatlas       100 Jul 25 21:34 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-26 01:40:22] -rwxr-xr-x. 1 boincer umatlas      7986 Jul 25 21:34 run_atlas
[2025-07-26 01:40:22] -rw-r--r--. 1 boincer umatlas       105 Jul 25 21:34 job.xml
[2025-07-26 01:40:22] -rw-r--r--. 2 boincer umatlas 145363937 Jul 25 21:34 EVNT.45743347._001362.pool.root.1
[2025-07-26 01:40:22] -rw-r--r--. 2 boincer umatlas    542894 Jul 25 21:34 input.tar.gz
[2025-07-26 01:40:22] -rw-r--r--. 2 boincer umatlas     15095 Jul 25 21:34 start_atlas.sh
[2025-07-26 01:40:22] drwxrwx--x. 2 boincer umatlas      4096 Jul 25 21:34 shared
[2025-07-26 01:40:22] -rw-r--r--. 1 boincer umatlas         0 Jul 25 21:34 boinc_lockfile
[2025-07-26 01:40:22] -rw-r--r--. 1 boincer umatlas      2561 Jul 25 21:34 pandaJob.out
[2025-07-26 01:40:22] -rw-------. 1 boincer umatlas    979985 Jul 25 21:34 agis_schedconf.cvmfs.json
[2025-07-26 01:40:22] drwx------. 4 boincer umatlas      4096 Jul 25 21:34 pilot3
[2025-07-26 01:40:22] -rw-r--r--. 1 boincer umatlas      6611 Jul 26 01:36 init_data.xml
[2025-07-26 01:40:22] -rw-------. 1 boincer umatlas 206523757 Jul 26 01:38 HITS.45743349._024024.pool.root.1
[2025-07-26 01:40:22] -rw-r--r--. 1 boincer umatlas       531 Jul 26 01:38 boinc_task_state.xml
[2025-07-26 01:40:22] -rw-------. 1 boincer umatlas      1047 Jul 26 01:39 memory_monitor_summary.json
[2025-07-26 01:40:22] -rw-------. 1 boincer umatlas        95 Jul 26 01:39 pilot_heartbeat.json
[2025-07-26 01:40:22] -rw-------. 1 boincer umatlas   1593052 Jul 26 01:39 agis_ddmendpoints.agis.ALL.json
[2025-07-26 01:40:22] -rw-------. 1 boincer umatlas    440460 Jul 26 01:39 log.45743349._024024.job.log.tgz.1
[2025-07-26 01:40:22] -rw-------. 1 boincer umatlas      7827 Jul 26 01:39 heartbeat.json
[2025-07-26 01:40:22] -rw-r--r--. 1 boincer umatlas        28 Jul 26 01:40 wrapper_checkpoint.txt
[2025-07-26 01:40:22] -rw-r--r--. 1 boincer umatlas      8192 Jul 26 01:40 boinc_mmap_file
[2025-07-26 01:40:22] -rw-------. 1 boincer umatlas       822 Jul 26 01:40 pilotlog.txt
[2025-07-26 01:40:22] -rw-------. 1 boincer umatlas   1186938 Jul 26 01:40 log.45743349._024024.job.log.1
[2025-07-26 01:40:22] -rw-------. 1 boincer umatlas       357 Jul 26 01:40 output.list
[2025-07-26 01:40:22] -rw-r--r--. 1 boincer umatlas       620 Jul 26 01:40 runtime_log
[2025-07-26 01:40:22] -rw-------. 1 boincer umatlas   1648640 Jul 26 01:40 result.tar.gz
[2025-07-26 01:40:22] -rw-r--r--. 1 boincer umatlas      8658 Jul 26 01:40 runtime_log.err
[2025-07-26 01:40:22] -rw-------. 1 boincer umatlas       655 Jul 26 01:40 gJGODmvmaz7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmnzPLDmnKoMOm.diag
[2025-07-26 01:40:22] -rw-r--r--. 1 boincer umatlas     21302 Jul 26 01:40 stderr.txt
[2025-07-26 01:40:22] HITS file was successfully produced:
[2025-07-26 01:40:22] -rw-------. 1 boincer umatlas 206523757 Jul 26 01:38 shared/HITS.pool.root.1
[2025-07-26 01:40:22]  *** Contents of shared directory: ***
[2025-07-26 01:40:22] total 345812
[2025-07-26 01:40:22] -rw-r--r--. 2 boincer umatlas 145363937 Jul 25 21:34 ATLAS.root_0
[2025-07-26 01:40:22] -rw-r--r--. 2 boincer umatlas    542894 Jul 25 21:34 input.tar.gz
[2025-07-26 01:40:22] -rw-r--r--. 2 boincer umatlas     15095 Jul 25 21:34 start_atlas.sh
[2025-07-26 01:40:22] -rw-------. 1 boincer umatlas 206523757 Jul 26 01:38 HITS.pool.root.1
[2025-07-26 01:40:22] -rw-------. 1 boincer umatlas   1648640 Jul 26 01:40 result.tar.gz
01:40:23 (2009007): run_atlas exited; CPU time 70947.277962
01:40:23 (2009007): called boinc_finish(0)

</stderr_txt>
]]>

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