Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
12:54:33 (9106): wrapper (7.7.26015): starting
12:54:33 (9106): wrapper: running run_atlas (--nthreads 8)
[2025-07-26 12:54:33] Arguments: --nthreads 8
[2025-07-26 12:54:33] Threads: 8
[2025-07-26 12:54:33] Checking for CVMFS
[2025-07-26 12:54:34] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-26 12:54:35] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-26 12:54:35] Running cvmfs_config stat atlas.cern.ch
[2025-07-26 12:54:35] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-26 12:54:35] 2.11.2.0 5627 108121 141680 148774 0 109 23722068 25165825 4098 130560 0 87965230 99.873 50828534 3853 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-07-26 12:54:35] CVMFS is ok
[2025-07-26 12:54:35] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-26 12:54:35] Checking for apptainer binary...
[2025-07-26 12:54:35] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-26 12:54:35] Running /usr/bin/apptainer --version
[2025-07-26 12:54:35] apptainer version 1.3.2-1.el7
[2025-07-26 12:54:35] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-26 12:54:36] cg-vwn498.simple-grid.lan
[2025-07-26 12:54:36] apptainer works
[2025-07-26 12:54:36] Set ATHENA_PROC_NUMBER=8
[2025-07-26 12:54:36] Set ATHENA_CORE_NUMBER=8
[2025-07-26 12:54:36] Starting ATLAS job with PandaID=6745060982
[2025-07-26 12:54:36] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-26 18:29:27]  *** The last 200 lines of the pilot log: ***
[2025-07-26 18:29:27] 2025-07-26 15:06:18,186 | INFO     | fitting pss+swap vs Time
[2025-07-26 18:29:27] 2025-07-26 15:06:18,186 | INFO     | sum of square deviations: 4560048290.0
[2025-07-26 18:29:27] 2025-07-26 15:06:18,188 | INFO     | sum of deviations: 27400981620.0
[2025-07-26 18:29:27] 2025-07-26 15:06:18,188 | INFO     | mean x: 1753534800.0
[2025-07-26 18:29:27] 2025-07-26 15:06:18,188 | INFO     | mean y: 2488749.1959183672
[2025-07-26 18:29:27] 2025-07-26 15:06:18,189 | INFO     | -- intersect: -10534367829.75719
[2025-07-26 18:29:27] 2025-07-26 15:06:18,189 | INFO     | intersect: -10534367829.75719
[2025-07-26 18:29:27] 2025-07-26 15:06:18,189 | INFO     | chi2: 2.236614596737961
[2025-07-26 18:29:27] 2025-07-26 15:06:18,189 | INFO     | sum of square deviations: 4286517580.0
[2025-07-26 18:29:27] 2025-07-26 15:06:18,191 | INFO     | sum of deviations: 42792230078.5
[2025-07-26 18:29:27] 2025-07-26 15:06:18,191 | INFO     | mean x: 1753534647.5
[2025-07-26 18:29:27] 2025-07-26 15:06:18,191 | INFO     | mean y: 2497179.904166667
[2025-07-26 18:29:27] 2025-07-26 15:06:18,192 | INFO     | -- intersect: -17503008556.62926
[2025-07-26 18:29:27] 2025-07-26 15:06:18,192 | INFO     | intersect: -17503008556.62926
[2025-07-26 18:29:27] 2025-07-26 15:06:18,192 | INFO     | chi2: 1.4689932810912685
[2025-07-26 18:29:27] 2025-07-26 15:06:18,192 | INFO     | current chi2=1.4689932810912685 (change=34.320678974654214 %)
[2025-07-26 18:29:27] 2025-07-26 15:06:18,192 | INFO     | sum of square deviations: 4024149870.0
[2025-07-26 18:29:27] 2025-07-26 15:06:18,194 | INFO     | sum of deviations: 41620514415.000015
[2025-07-26 18:29:27] 2025-07-26 15:06:18,194 | INFO     | mean x: 1753534495.0
[2025-07-26 18:29:27] 2025-07-26 15:06:18,194 | INFO     | mean y: 2496498.8085106383
[2025-07-26 18:29:27] 2025-07-26 15:06:18,195 | INFO     | -- intersect: -18133758383.355526
[2025-07-26 18:29:27] 2025-07-26 15:06:18,195 | INFO     | intersect: -18133758383.355526
[2025-07-26 18:29:27] 2025-07-26 15:06:18,195 | INFO     | chi2: 1.4695657022503945
[2025-07-26 18:29:27] 2025-07-26 15:06:18,195 | INFO     | current chi2=1.4695657022503945 (change=-0.038966901108002466 %)
[2025-07-26 18:29:27] 2025-07-26 15:06:18,195 | INFO     | right removable region: 234
[2025-07-26 18:29:27] 2025-07-26 15:06:18,196 | INFO     | sum of square deviations: 4286517580.0
[2025-07-26 18:29:27] 2025-07-26 15:06:18,197 | INFO     | sum of deviations: -9207829372.500002
[2025-07-26 18:29:27] 2025-07-26 15:06:18,198 | INFO     | mean x: 1753534952.5
[2025-07-26 18:29:27] 2025-07-26 15:06:18,198 | INFO     | mean y: 2508961.779166667
[2025-07-26 18:29:27] 2025-07-26 15:06:18,198 | INFO     | -- intersect: 3769261422.254296
[2025-07-26 18:29:27] 2025-07-26 15:06:18,198 | INFO     | intersect: 3769261422.254296
[2025-07-26 18:29:27] 2025-07-26 15:06:18,198 | INFO     | chi2: 0.8281305186563895
[2025-07-26 18:29:27] 2025-07-26 15:06:18,198 | INFO     | current chi2=0.8281305186563895 (change=62.973928549684224 %)
[2025-07-26 18:29:27] 2025-07-26 15:06:18,199 | INFO     | sum of square deviations: 4024149870.0
[2025-07-26 18:29:27] 2025-07-26 15:06:18,201 | INFO     | sum of deviations: -6153819079.999998
[2025-07-26 18:29:27] 2025-07-26 15:06:18,201 | INFO     | mean x: 1753535105.0
[2025-07-26 18:29:27] 2025-07-26 15:06:18,201 | INFO     | mean y: 2507155.055319149
[2025-07-26 18:29:27] 2025-07-26 15:06:18,201 | INFO     | -- intersect: 2684051862.6829205
[2025-07-26 18:29:27] 2025-07-26 15:06:18,201 | INFO     | intersect: 2684051862.6829205
[2025-07-26 18:29:27] 2025-07-26 15:06:18,202 | INFO     | chi2: 0.8067280426061761
[2025-07-26 18:29:27] 2025-07-26 15:06:18,202 | INFO     | current chi2=0.8067280426061761 (change=2.5844327153813995 %)
[2025-07-26 18:29:27] 2025-07-26 15:06:18,202 | INFO     | left removable region: 20
[2025-07-26 18:29:27] 2025-07-26 15:06:18,202 | INFO     | sum of square deviations: 3038856977.5
[2025-07-26 18:29:27] 2025-07-26 15:06:18,204 | INFO     | sum of deviations: 8670103636.499994
[2025-07-26 18:29:27] 2025-07-26 15:06:18,204 | INFO     | mean x: 1753535074.5
[2025-07-26 18:29:27] 2025-07-26 15:06:18,204 | INFO     | mean y: 2516145.0887850467
[2025-07-26 18:29:27] 2025-07-26 15:06:18,204 | INFO     | -- intersect: -5000460611.869412
[2025-07-26 18:29:27] 2025-07-26 15:06:18,204 | INFO     | intersect: -5000460611.869412
[2025-07-26 18:29:27] 2025-07-26 15:06:18,204 | INFO     | chi2: 0.002237007511883229
[2025-07-26 18:29:27] 2025-07-26 15:06:18,205 | INFO     | -- intersect: -5000460611.869412
[2025-07-26 18:29:27] 2025-07-26 15:06:18,205 | INFO     | current memory leak: 2.85 B/s (using 214 data points, chi2=0.00)
[2025-07-26 18:29:27] 2025-07-26 15:06:18,205 | INFO     | could have reported an average CPU frequency of 2249 MHz (11 samples)
[2025-07-26 18:29:27] 2025-07-26 15:06:18,206 | INFO     | ..............................
[2025-07-26 18:29:27] 2025-07-26 15:06:18,206 | INFO     | . Timing measurements:
[2025-07-26 18:29:27] 2025-07-26 15:06:18,206 | INFO     | . get job = 0 s
[2025-07-26 18:29:27] 2025-07-26 15:06:18,206 | INFO     | . initial setup = 2 s
[2025-07-26 18:29:27] 2025-07-26 15:06:18,206 | INFO     | . payload setup = 16 s
[2025-07-26 18:29:27] 2025-07-26 15:06:18,206 | INFO     | . stage-in = 0 s
[2025-07-26 18:29:27] 2025-07-26 15:06:18,206 | INFO     | . payload execution = 14939 s
[2025-07-26 18:29:27] 2025-07-26 15:06:18,206 | INFO     | . stage-out = 3 s
[2025-07-26 18:29:27] 2025-07-26 15:06:18,206 | INFO     | . log creation = 1 s
[2025-07-26 18:29:27] 2025-07-26 15:06:18,206 | INFO     | ..............................
[2025-07-26 18:29:27] 2025-07-26 15:06:18,556 | INFO     | 
[2025-07-26 18:29:27] 2025-07-26 15:06:18,556 | INFO     | job summary report
[2025-07-26 18:29:27] 2025-07-26 15:06:18,557 | INFO     | --------------------------------------------------
[2025-07-26 18:29:27] 2025-07-26 15:06:18,557 | INFO     | PanDA job id: 6745060982
[2025-07-26 18:29:27] 2025-07-26 15:06:18,557 | INFO     | task id: 45743349
[2025-07-26 18:29:27] 2025-07-26 15:06:18,557 | INFO     | errors: (none)
[2025-07-26 18:29:27] 2025-07-26 15:06:18,557 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-26 18:29:27] 2025-07-26 15:06:18,557 | INFO     | pilot state: finished 
[2025-07-26 18:29:27] 2025-07-26 15:06:18,557 | INFO     | transexitcode: 0
[2025-07-26 18:29:27] 2025-07-26 15:06:18,557 | INFO     | exeerrorcode: 0
[2025-07-26 18:29:27] 2025-07-26 15:06:18,557 | INFO     | exeerrordiag: 
[2025-07-26 18:29:27] 2025-07-26 15:06:18,557 | INFO     | exitcode: 0
[2025-07-26 18:29:27] 2025-07-26 15:06:18,557 | INFO     | exitmsg: OK
[2025-07-26 18:29:27] 2025-07-26 15:06:18,557 | INFO     | cpuconsumptiontime: 57548 s
[2025-07-26 18:29:27] 2025-07-26 15:06:18,558 | INFO     | nevents: 400
[2025-07-26 18:29:27] 2025-07-26 15:06:18,558 | INFO     | neventsw: 0
[2025-07-26 18:29:27] 2025-07-26 15:06:18,558 | INFO     | pid: 19707
[2025-07-26 18:29:27] 2025-07-26 15:06:18,558 | INFO     | pgrp: 19707
[2025-07-26 18:29:27] 2025-07-26 15:06:18,558 | INFO     | corecount: 8
[2025-07-26 18:29:27] 2025-07-26 15:06:18,558 | INFO     | event service: False
[2025-07-26 18:29:27] 2025-07-26 15:06:18,558 | INFO     | sizes: {0: 2397303, 1: 2397502, 9: 2397764, 12: 2397792, 14960: 2428147, 14966: 2437329, 15059: 2437467}
[2025-07-26 18:29:27] 2025-07-26 15:06:18,558 | INFO     | --------------------------------------------------
[2025-07-26 18:29:27] 2025-07-26 15:06:18,558 | INFO     | 
[2025-07-26 18:29:27] 2025-07-26 15:06:18,558 | INFO     | executing command: ls -lF /var/lib/boinc/slots/4
[2025-07-26 18:29:27] 2025-07-26 15:06:18,702 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-26 18:29:27] 2025-07-26 15:06:18,702 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-26 18:29:27] 2025-07-26 15:06:18,702 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-26 18:29:27] 2025-07-26 15:06:18,702 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-26 18:29:27] 2025-07-26 15:06:18,702 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-26 18:29:27] 2025-07-26 15:06:18,702 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-26 18:29:27] 2025-07-26 15:06:18,702 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-26 18:29:27] 2025-07-26 15:06:18,703 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-26 18:29:27] 2025-07-26 15:06:18,703 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-26 18:29:27] 2025-07-26 15:06:18,703 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-26 18:29:27] 2025-07-26 15:06:18,703 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-26 18:29:27] 2025-07-26 15:06:18,703 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-26 18:29:27] 2025-07-26 15:06:18,703 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-26 18:29:27] 2025-07-26 15:06:18,703 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-26 18:29:27] 2025-07-26 15:06:18,703 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-26 18:29:27] 2025-07-26 15:06:18,703 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-26 18:29:27] 2025-07-26 15:06:18,703 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-26 18:29:27] 2025-07-26 15:06:18,703 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-26 18:29:27] 2025-07-26 15:06:18,704 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-26 18:29:27] 2025-07-26 15:06:18,704 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-26 18:29:27] 2025-07-26 15:06:18,704 | INFO     | job 6745060982 has completed (purged errors)
[2025-07-26 18:29:27] 2025-07-26 15:06:18,704 | INFO     | overall cleanup function is called
[2025-07-26 18:29:27] 2025-07-26 15:06:19,712 | INFO     | --- collectZombieJob: --- 10, [19707]
[2025-07-26 18:29:27] 2025-07-26 15:06:19,713 | INFO     | zombie collector waiting for pid 19707
[2025-07-26 18:29:27] 2025-07-26 15:06:19,713 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-26 18:29:27] 2025-07-26 15:06:19,713 | INFO     | collected zombie processes
[2025-07-26 18:29:27] 2025-07-26 15:06:19,713 | INFO     | will attempt to kill all subprocesses of pid=19707
[2025-07-26 18:29:27] 2025-07-26 15:06:19,827 | INFO     | process IDs to be killed: [19707] (in reverse order)
[2025-07-26 18:29:27] 2025-07-26 15:06:20,800 | WARNING  | found no corresponding commands to process id(s)
[2025-07-26 18:29:27] 2025-07-26 15:06:20,800 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-26 18:29:27] 2025-07-26 15:06:20,803 | INFO     | did not find any defunct processes belonging to 19707
[2025-07-26 18:29:27] 2025-07-26 15:06:20,806 | INFO     | did not find any defunct processes belonging to 19707
[2025-07-26 18:29:27] 2025-07-26 15:06:20,806 | INFO     | ready for new job
[2025-07-26 18:29:27] 2025-07-26 15:06:20,806 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-26 18:29:27] 2025-07-26 15:06:20,808 | INFO     | ***************************************
[2025-07-26 18:29:27] 2025-07-26 15:06:20,808 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-26 18:29:27] 2025-07-26 15:06:20,808 | INFO     | ***************************************
[2025-07-26 18:29:27] 2025-07-26 15:06:20,808 | INFO     | 
[2025-07-26 18:29:27] 2025-07-26 15:06:20,809 | INFO     | pilot is running in a VM
[2025-07-26 18:29:27] 2025-07-26 15:06:20,809 | INFO     | architecture information:
[2025-07-26 18:29:27] 2025-07-26 15:06:20,812 | INFO     | executing command: cat /etc/os-release
[2025-07-26 18:29:27] 2025-07-26 15:06:21,039 | INFO     | cat /etc/os-release:
[2025-07-26 18:29:27] NAME="CentOS Linux"
[2025-07-26 18:29:27] VERSION="7 (Core)"
[2025-07-26 18:29:27] ID="centos"
[2025-07-26 18:29:27] ID_LIKE="rhel fedora"
[2025-07-26 18:29:27] VERSION_ID="7"
[2025-07-26 18:29:27] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-26 18:29:27] ANSI_COLOR="0;31"
[2025-07-26 18:29:27] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-26 18:29:27] HOME_URL="https://www.centos.org/"
[2025-07-26 18:29:27] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-26 18:29:27] 
[2025-07-26 18:29:27] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-26 18:29:27] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-26 18:29:27] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-26 18:29:27] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-26 18:29:27] 
[2025-07-26 18:29:27] 2025-07-26 15:06:21,039 | INFO     | ***************************************
[2025-07-26 18:29:27] 2025-07-26 15:06:21,542 | INFO     | executing command: df -mP /var/lib/boinc/slots/4
[2025-07-26 18:29:27] 2025-07-26 15:06:21,766 | INFO     | sufficient remaining disk space (496868786176 B)
[2025-07-26 18:29:27] 2025-07-26 15:06:21,766 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-26 18:29:27] 2025-07-26 15:06:21,766 | INFO     | current server update state: UPDATING_FINAL
[2025-07-26 18:29:27] 2025-07-26 15:06:21,766 | INFO     | update_server=False
[2025-07-26 18:29:27] 2025-07-26 15:06:21,766 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-26 18:29:27] 2025-07-26 15:06:21,767 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-26 18:29:27] 2025-07-26 15:06:21,771 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-26 18:29:27] 2025-07-26 15:06:21,835 | INFO     | all job control threads have been joined
[2025-07-26 18:29:27] 2025-07-26 15:06:22,099 | INFO     | all data control threads have been joined
[2025-07-26 18:29:27] 2025-07-26 15:06:22,116 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-07-26 18:29:27] 2025-07-26 15:06:22,116 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-07-26 18:29:27] 2025-07-26 15:06:22,117 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-26 18:29:27] 2025-07-26 15:06:22,117 | INFO     | will abort loop
[2025-07-26 18:29:27] 2025-07-26 15:06:22,438 | INFO     | all payload control threads have been joined
[2025-07-26 18:29:27] 2025-07-26 15:06:22,772 | INFO     | [job] retrieve thread has finished
[2025-07-26 18:29:27] 2025-07-26 15:06:22,841 | INFO     | [job] control thread has finished
[2025-07-26 18:29:27] 2025-07-26 15:06:23,105 | INFO     | [data] control thread has finished
[2025-07-26 18:29:27] 2025-07-26 15:06:23,122 | INFO     | [job] job monitor thread has finished
[2025-07-26 18:29:27] 2025-07-26 15:06:23,185 | INFO     | [data] copytool_in thread has finished
[2025-07-26 18:29:27] 2025-07-26 15:06:23,190 | INFO     | [payload] execute_payloads thread has finished
[2025-07-26 18:29:27] 2025-07-26 15:06:23,233 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-26 18:29:27] 2025-07-26 15:06:23,361 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-26 18:29:27] 2025-07-26 15:06:23,444 | INFO     | [payload] control thread has finished
[2025-07-26 18:29:27] 2025-07-26 15:06:23,692 | INFO     | [payload] failed_post thread has finished
[2025-07-26 18:29:27] 2025-07-26 15:06:23,774 | INFO     | [data] copytool_out thread has finished
[2025-07-26 18:29:27] 2025-07-26 15:06:23,790 | INFO     | [payload] validate_post thread has finished
[2025-07-26 18:29:27] 2025-07-26 15:06:23,852 | INFO     | [job] validate thread has finished
[2025-07-26 18:29:27] 2025-07-26 15:06:24,002 | INFO     | [payload] validate_pre thread has finished
[2025-07-26 18:29:27] 2025-07-26 15:06:24,166 | INFO     | [job] create_data_payload thread has finished
[2025-07-26 18:29:27] 2025-07-26 15:06:24,367 | INFO     | [job] queue monitor thread has finished
[2025-07-26 18:29:27] 2025-07-26 15:06:25,783 | INFO     | [data] queue_monitor thread has finished
[2025-07-26 18:29:27] 2025-07-26 15:06:27,190 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140631384422208)>', '<ExcThread(monitor, started 140630508431104)>']
[2025-07-26 18:29:27] 2025-07-26 15:06:32,216 | INFO     | all workflow threads have been joined
[2025-07-26 18:29:27] 2025-07-26 15:06:32,216 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-26 18:29:27] 2025-07-26 15:06:32,217 | INFO     | traces error code: 0
[2025-07-26 18:29:27] 2025-07-26 15:06:32,217 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-26 18:29:27] 2025-07-26 15:06:51,515 | INFO     | PID=13158 has CPU usage=1.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-07-26 18:29:27] 2025-07-26 15:06:51,516 | INFO     | .. there are 9 such processes running
[2025-07-26 18:29:27] 2025-07-26 15:06:51,516 | INFO     | found 0 job(s) in 20 queues
[2025-07-26 18:29:27] 2025-07-26 15:06:51,516 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-26 18:29:27] 2025-07-26 15:06:51,516 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-26 18:29:27] 2025-07-26 15:06:51,516 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-26 18:29:27] 2025-07-26 15:06:51,516 | CRITICAL | thread 'MainThread' is not alive
[2025-07-26 18:29:27] 2025-07-26 15:06:51,516 | INFO     | [monitor] control thread has ended
[2025-07-26 18:29:27] 2025-07-26 15:06:51,740 [wrapper] ==== pilot stdout END ====
[2025-07-26 18:29:27] 2025-07-26 15:06:51,750 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-26 18:29:27] 2025-07-26 15:06:51,808 [wrapper] pilotpid: 13158
[2025-07-26 18:29:27] 2025-07-26 15:06:51,927 [wrapper] Pilot exit status: 0
[2025-07-26 18:29:27] 2025-07-26 15:06:52,401 [wrapper] pandaids: 6745060982
[2025-07-26 18:29:27] 2025-07-26 15:06:53,450 [wrapper] cleanup supervisor_pilot 29282 13159
[2025-07-26 18:29:27] 2025-07-26 15:06:53,553 [wrapper] Test setup, not cleaning
[2025-07-26 18:29:27] 2025-07-26 15:06:53,649 [wrapper] apfmon messages muted
[2025-07-26 18:29:27] 2025-07-26 15:06:53,784 [wrapper] ==== wrapper stdout END ====
[2025-07-26 18:29:27] 2025-07-26 15:06:53,862 [wrapper] ==== wrapper stderr END ====
[2025-07-26 18:29:27]  *** Error codes and diagnostics ***
[2025-07-26 18:29:27]     "exeErrorCode": 0,
[2025-07-26 18:29:27]     "exeErrorDiag": "",
[2025-07-26 18:29:27]     "pilotErrorCode": 0,
[2025-07-26 18:29:27]     "pilotErrorDiag": "",
[2025-07-26 18:29:27]  *** Listing of results directory ***
[2025-07-26 18:29:27] total 440920
[2025-07-26 18:29:27] -rw-r--r--. 1 boinc boinc    530466 Jul 25 21:17 pilot3.tar.gz
[2025-07-26 18:29:27] -rw-r--r--. 1 boinc boinc      5112 Jul 25 21:50 queuedata.json
[2025-07-26 18:29:27] -rwx------. 1 boinc boinc     36292 Jul 25 21:51 runpilot2-wrapper.sh
[2025-07-26 18:29:27] -rw-r--r--. 1 boinc boinc       100 Jul 26 12:54 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-26 18:29:27] -rwxr-xr-x. 1 boinc boinc      7986 Jul 26 12:54 run_atlas
[2025-07-26 18:29:27] -rw-r--r--. 1 boinc boinc       105 Jul 26 12:54 job.xml
[2025-07-26 18:29:27] -rw-r--r--. 1 boinc boinc      6392 Jul 26 12:54 init_data.xml
[2025-07-26 18:29:27] -rw-r--r--. 2 boinc boinc 229931378 Jul 26 12:54 EVNT.45743347._001460.pool.root.1
[2025-07-26 18:29:27] -rw-r--r--. 2 boinc boinc     15095 Jul 26 12:54 start_atlas.sh
[2025-07-26 18:29:27] drwxrwx--x. 2 boinc boinc        68 Jul 26 12:54 shared
[2025-07-26 18:29:27] -rw-r--r--. 2 boinc boinc    542894 Jul 26 12:54 input.tar.gz
[2025-07-26 18:29:27] -rw-r--r--. 1 boinc boinc         0 Jul 26 12:54 boinc_lockfile
[2025-07-26 18:29:27] -rw-r--r--. 1 boinc boinc      2562 Jul 26 12:54 pandaJob.out
[2025-07-26 18:29:27] -rw-------. 1 boinc boinc    980133 Jul 26 12:54 agis_schedconf.cvmfs.json
[2025-07-26 18:29:27] drwx------. 4 boinc boinc      4096 Jul 26 12:55 pilot3
[2025-07-26 18:29:27] -rw-------. 1 boinc boinc 214283495 Jul 26 17:03 HITS.45743349._026147.pool.root.1
[2025-07-26 18:29:27] -rw-r--r--. 1 boinc boinc       531 Jul 26 17:03 boinc_task_state.xml
[2025-07-26 18:29:27] -rw-------. 1 boinc boinc      1016 Jul 26 17:04 memory_monitor_summary.json
[2025-07-26 18:29:27] -rw-------. 1 boinc boinc   1593052 Jul 26 17:04 agis_ddmendpoints.agis.ALL.json
[2025-07-26 18:29:27] -rw-------. 1 boinc boinc    406314 Jul 26 17:04 log.45743349._026147.job.log.tgz.1
[2025-07-26 18:29:27] -rw-------. 1 boinc boinc        95 Jul 26 17:05 pilot_heartbeat.json
[2025-07-26 18:29:27] -rw-------. 1 boinc boinc      7779 Jul 26 17:06 heartbeat.json
[2025-07-26 18:29:27] -rw-------. 1 boinc boinc       890 Jul 26 17:06 pilotlog.txt
[2025-07-26 18:29:27] -rw-------. 1 boinc boinc   1306432 Jul 26 17:06 log.45743349._026147.job.log.1
[2025-07-26 18:29:27] -rw-------. 1 boinc boinc       357 Jul 26 17:06 output.list
[2025-07-26 18:29:27] -rw-r--r--. 1 boinc boinc       620 Jul 26 17:06 runtime_log
[2025-07-26 18:29:27] -rw-------. 1 boinc boinc   1730560 Jul 26 17:06 result.tar.gz
[2025-07-26 18:29:27] -rw-------. 1 boinc boinc       657 Jul 26 17:06 t2EMDm5cdz7n9Rq4apOajLDm4fhM0noT9bVof3QYDmzVzKDmpTjJOm.diag
[2025-07-26 18:29:27] -rw-r--r--. 1 boinc boinc      8660 Jul 26 17:06 runtime_log.err
[2025-07-26 18:29:27] -rw-r--r--. 1 boinc boinc      8192 Jul 26 18:29 boinc_mmap_file
[2025-07-26 18:29:27] -rw-r--r--. 1 boinc boinc        28 Jul 26 18:29 wrapper_checkpoint.txt
[2025-07-26 18:29:27] -rw-r--r--. 1 boinc boinc     20583 Jul 26 18:29 stderr.txt
[2025-07-26 18:29:28] HITS file was successfully produced:
[2025-07-26 18:29:28] -rw-------. 1 boinc boinc 214283495 Jul 26 17:03 shared/HITS.pool.root.1
[2025-07-26 18:29:28]  *** Contents of shared directory: ***
[2025-07-26 18:29:28] total 436048
[2025-07-26 18:29:28] -rw-r--r--. 2 boinc boinc 229931378 Jul 26 12:54 ATLAS.root_0
[2025-07-26 18:29:28] -rw-r--r--. 2 boinc boinc     15095 Jul 26 12:54 start_atlas.sh
[2025-07-26 18:29:28] -rw-r--r--. 2 boinc boinc    542894 Jul 26 12:54 input.tar.gz
[2025-07-26 18:29:28] -rw-------. 1 boinc boinc 214283495 Jul 26 17:03 HITS.pool.root.1
[2025-07-26 18:29:28] -rw-------. 1 boinc boinc   1730560 Jul 26 17:06 result.tar.gz
18:29:29 (9106): run_atlas exited; CPU time 57724.178269
18:29:29 (9106): called boinc_finish(0)

</stderr_txt>
]]>

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