Stderr output

<core_client_version>8.2.4</core_client_version>
<![CDATA[
<stderr_txt>
2025-07-25 23:38:01 (16188): Detected: vboxwrapper 26206
2025-07-25 23:38:01 (16188): Detected: BOINC client v8.2.4
2025-07-25 23:38:02 (16188): Detected: VirtualBox VboxManage Interface (Version: 7.1.8)
2025-07-25 23:38:02 (16188): Successfully copied 'init_data.xml' to the shared directory.
2025-07-25 23:38:03 (16188): Create VM. (boinc_c8dc63316b32aa0d, slot#4)
2025-07-25 23:38:04 (16188): Setting Memory Size for VM. (4400MB)
2025-07-25 23:38:04 (16188): Setting CPU Count for VM. (4)
2025-07-25 23:38:04 (16188): Setting Chipset Options for VM.
2025-07-25 23:38:05 (16188): Setting Graphics Controller Options for VM.
2025-07-25 23:38:05 (16188): Setting Boot Options for VM.
2025-07-25 23:38:05 (16188): Setting Network Configuration for NAT.
2025-07-25 23:38:06 (16188): Enabling VM Network Access.
2025-07-25 23:38:06 (16188): Disabling USB Support for VM.
2025-07-25 23:38:06 (16188): Disabling COM Port Support for VM.
2025-07-25 23:38:06 (16188): Disabling LPT Port Support for VM.
2025-07-25 23:38:07 (16188): Disabling Audio Support for VM.
2025-07-25 23:38:07 (16188): Disabling Clipboard Support for VM.
2025-07-25 23:38:07 (16188): Disabling Drag and Drop Support for VM.
2025-07-25 23:38:07 (16188): Adding storage controller(s) to VM.
2025-07-25 23:38:08 (16188): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2025-07-25 23:38:11 (16188): Adding VirtualBox Guest Additions to VM.
2025-07-25 23:38:11 (16188): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-07-25 23:38:11 (16188): forwarding host port 58335 to guest port 80
2025-07-25 23:38:11 (16188): Enabling remote desktop for VM.
2025-07-25 23:38:12 (16188): Required extension pack not installed, remote desktop not enabled.
2025-07-25 23:38:12 (16188): Enabling shared directory for VM.
2025-07-25 23:38:12 (16188): Starting VM using VBoxManage interface. (boinc_c8dc63316b32aa0d, slot#4)
2025-07-25 23:38:17 (16188): Successfully started VM. (PID = '13076')
2025-07-25 23:38:17 (16188): Reporting VM Process ID to BOINC.
2025-07-25 23:38:17 (16188): Guest Log: BIOS: VirtualBox 7.1.8
2025-07-25 23:38:17 (16188): Guest Log: CPUID EDX: 0x178bfbff
2025-07-25 23:38:17 (16188): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-07-25 23:38:17 (16188): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-07-25 23:38:17 (16188): VM state change detected. (old = 'poweredoff', new = 'running')
2025-07-25 23:38:17 (16188): Detected: Web Application Enabled (http://localhost:58335)
2025-07-25 23:38:17 (16188): Preference change detected
2025-07-25 23:38:17 (16188): Setting CPU throttle for VM. (100%)
2025-07-25 23:38:17 (16188): Setting checkpoint interval to 1800 seconds. (Higher value of (Preference: 1800 seconds) or (Vbox_job.xml: 900 seconds))
2025-07-25 23:38:19 (16188): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-07-25 23:38:19 (16188): Guest Log: BIOS: Booting from Hard Disk...
2025-07-25 23:38:22 (16188): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-07-25 23:38:22 (16188): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-07-25 23:38:22 (16188): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-07-25 23:38:22 (16188): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-07-25 23:38:22 (16188): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-07-25 23:38:22 (16188): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-07-25 23:38:22 (16188): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-07-25 23:38:22 (16188): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-07-25 23:38:22 (16188): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-07-25 23:38:22 (16188): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-07-25 23:38:22 (16188): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-07-25 23:38:22 (16188): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-07-25 23:38:22 (16188): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-07-25 23:38:22 (16188): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-07-25 23:38:22 (16188): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-07-25 23:38:22 (16188): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-07-25 23:38:22 (16188): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-07-25 23:38:22 (16188): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-07-25 23:38:22 (16188): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-07-25 23:38:22 (16188): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-07-25 23:38:22 (16188): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-07-25 23:38:22 (16188): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-07-25 23:38:22 (16188): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-07-25 23:38:22 (16188): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-07-25 23:38:22 (16188): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-07-25 23:38:22 (16188): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-07-25 23:38:22 (16188): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-07-25 23:38:22 (16188): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-07-25 23:38:22 (16188): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-07-25 23:38:22 (16188): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-07-25 23:38:22 (16188): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-07-25 23:38:22 (16188): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-07-25 23:38:30 (16188): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-07-25 23:38:30 (16188): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-07-25 23:38:40 (16188): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-07-25 23:38:40 (16188): Guest Log: 00:00:00.000180 main     Log opened 2025-07-25T23:38:38.525868000Z
2025-07-25 23:38:40 (16188): Guest Log: 00:00:00.000250 main     OS Product: Linux
2025-07-25 23:38:40 (16188): Guest Log: 00:00:00.000270 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-07-25 23:38:40 (16188): Guest Log: 00:00:00.000284 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-07-25 23:38:40 (16188): Guest Log: 00:00:00.000298 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-07-25 23:38:40 (16188): Guest Log: 00:00:00.000298 main     Process ID: 1312
2025-07-25 23:38:40 (16188): Guest Log: 00:00:00.000298 main     Package type: LINUX_64BITS_GENERIC
2025-07-25 23:38:40 (16188): Guest Log: 00:00:00.000979 main     5.2.32 r132073 started. Verbose level = 0
2025-07-25 23:38:40 (16188): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-07-25 23:38:40 (16188): Guest Log: [INFO] Mounting shared directory
2025-07-25 23:38:40 (16188): Guest Log: [INFO] Checking for init_data.xml
2025-07-25 23:38:50 (16188): Guest Log: 00:00:10.005114 timesync vgsvcTimeSyncWorker: Radical guest time change: 14 410 979 240 000ns (GuestNow=1 753 501 129 506 998 000 ns GuestLast=1 753 486 718 527 758 000 ns fSetTimeLastLoop=true )
2025-07-25 23:38:55 (16188): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-07-25 23:38:55 (16188): Guest Log: [INFO] Detected branch: prod
2025-07-25 23:38:55 (16188): Guest Log: This is the prod version of the ATLAS job wrapper
2025-07-25 23:38:55 (16188): Guest Log: Copying input files
2025-07-25 23:38:56 (16188): Guest Log: Copied input files into RunAtlas.
2025-07-25 23:38:56 (16188): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-07-25 23:38:56 (16188): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-07-25 23:38:56 (16188): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-07-25 23:38:56 (16188): Guest Log: Further information can be found at the LHC@home message board.
2025-07-25 23:39:09 (16188): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-07-25 23:39:10 (16188): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-07-25 23:39:10 (16188): Guest Log: 2.6.3.0 1594 0 30192 148763 3 1 3117619 4096000 0 65024 0 0 n/a 0 0 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
2025-07-25 23:39:12 (16188): Guest Log: copied the webapp to /var/www
2025-07-25 23:39:12 (16188): Guest Log: ATHENA_PROC_NUMBER=4
2025-07-25 23:39:12 (16188): Guest Log: ATHENA_CORE_NUMBER=4
2025-07-25 23:39:13 (16188): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-07-25 23:39:13 (16188): Guest Log:  *** Starting ATLAS job. (PandaID=6745060733 taskID=45743349) ***
2025-07-26 01:18:23 (16188): Status Report: Elapsed Time: '6000.000000'
2025-07-26 01:18:23 (16188): Status Report: CPU Time: '20831.171875'
2025-07-26 02:15:15 (16188): Guest Log:  *** Job finished ***
2025-07-26 02:15:15 (16188): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-07-26 02:15:15 (16188): Guest Log: 2025-07-26 06:14:56,074 | INFO     | [payload] control thread has finished
2025-07-26 02:15:15 (16188): Guest Log: 2025-07-26 06:14:56,430 | INFO     | [data] copytool_out thread has finished
2025-07-26 02:15:15 (16188): Guest Log: 2025-07-26 06:14:59,286 | INFO     | [data] queue_monitor thread has finished
2025-07-26 02:15:15 (16188): Guest Log: 2025-07-26 06:15:00,690 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140440826054464)>', '<ExcThread(monitor, started 140440229623552)>']
2025-07-26 02:15:15 (16188): Guest Log: 2025-07-26 06:15:01,675 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-07-26 02:15:15 (16188): Guest Log: 2025-07-26 06:15:01,675 | INFO     | [monitor] control thread has ended
2025-07-26 02:15:15 (16188): Guest Log: 2025-07-26 06:15:05,698 | INFO     | all workflow threads have been joined
2025-07-26 02:15:15 (16188): Guest Log: 2025-07-26 06:15:05,699 | INFO     | end of generic workflow (traces error code: 0)
2025-07-26 02:15:15 (16188): Guest Log: 2025-07-26 06:15:05,699 | INFO     | traces error code: 0
2025-07-26 02:15:15 (16188): Guest Log: 2025-07-26 06:15:05,699 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-07-26 02:15:15 (16188): Guest Log: 2025-07-26 06:15:05,828 [wrapper] ==== pilot stdout END ====
2025-07-26 02:15:15 (16188): Guest Log: 2025-07-26 06:15:05,831 [wrapper] ==== wrapper stdout RESUME ====
2025-07-26 02:15:15 (16188): Guest Log: 2025-07-26 06:15:05,835 [wrapper] pilotpid: 5930
2025-07-26 02:15:15 (16188): Guest Log: 2025-07-26 06:15:05,838 [wrapper] Pilot exit status: 0
2025-07-26 02:15:15 (16188): Guest Log: 2025-07-26 06:15:06,904 [wrapper] pandaids: 6745060733
2025-07-26 02:15:15 (16188): Guest Log: 2025-07-26 06:15:06,930 [wrapper] cleanup supervisor_pilot  7880 5931
2025-07-26 02:15:15 (16188): Guest Log: 2025-07-26 06:15:06,934 [wrapper] Test setup, not cleaning
2025-07-26 02:15:15 (16188): Guest Log: 2025-07-26 06:15:06,937 [wrapper] apfmon messages muted
2025-07-26 02:15:15 (16188): Guest Log: 2025-07-26 06:15:06,941 [wrapper] ==== wrapper stdout END ====
2025-07-26 02:15:15 (16188): Guest Log: 2025-07-26 06:15:06,944 [wrapper] ==== wrapper stderr END ====
2025-07-26 02:15:15 (16188): Guest Log:  *** Error codes and diagnostics ***
2025-07-26 02:15:15 (16188): Guest Log:     "exeErrorCode": 0,
2025-07-26 02:15:15 (16188): Guest Log:     "exeErrorDiag": "",
2025-07-26 02:15:15 (16188): Guest Log:     "pilotErrorCode": 0,
2025-07-26 02:15:15 (16188): Guest Log:     "pilotErrorDiag": "",
2025-07-26 02:15:15 (16188): Guest Log:  *** Listing of results directory ***
2025-07-26 02:15:15 (16188): Guest Log: total 203756
2025-07-26 02:15:15 (16188): Guest Log: -rw-r--r--. 1 atlas atlas    530466 Jul 25 19:17 pilot3.tar.gz
2025-07-26 02:15:15 (16188): Guest Log: -rwx------. 1 atlas atlas     36292 Jul 25 19:27 runpilot2-wrapper.sh
2025-07-26 02:15:15 (16188): Guest Log: -rw-r--r--. 1 atlas atlas      5112 Jul 25 19:27 queuedata.json
2025-07-26 02:15:15 (16188): Guest Log: -rwxr-xr-x. 1 atlas atlas      8488 Jul 26 03:38 init_data.xml
2025-07-26 02:15:15 (16188): Guest Log: -rwxr-xr-x. 1 atlas atlas    542895 Jul 26 03:38 input.tar.gz
2025-07-26 02:15:15 (16188): Guest Log: -rwxr-xr-x. 1 atlas atlas     15095 Jul 26 03:38 start_atlas.sh
2025-07-26 02:15:15 (16188): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Jul 26 03:38 EVNT.45743347._001451.pool.root.1 -> /data/./ATLAS.root_0
2025-07-26 02:15:15 (16188): Guest Log: -rw-r--r--. 1 atlas atlas      2563 Jul 26 03:39 pandaJob.out
2025-07-26 02:15:15 (16188): Guest Log: -rw-------. 1 atlas atlas    980001 Jul 26 03:41 agis_schedconf.cvmfs.json
2025-07-26 02:15:15 (16188): Guest Log: -rw-------. 1 atlas atlas   1593052 Jul 26 03:41 agis_ddmendpoints.agis.ALL.json
2025-07-26 02:15:15 (16188): Guest Log: drwx------. 4 atlas atlas      4096 Jul 26 03:41 pilot3
2025-07-26 02:15:15 (16188): Guest Log: -rw-------. 1 atlas atlas 202663161 Jul 26 06:14 HITS.45743349._025915.pool.root.1
2025-07-26 02:15:15 (16188): Guest Log: -rw-------. 1 atlas atlas      1026 Jul 26 06:14 memory_monitor_summary.json
2025-07-26 02:15:15 (16188): Guest Log: -rw-------. 1 atlas atlas    283067 Jul 26 06:14 log.45743349._025915.job.log.tgz.1
2025-07-26 02:15:15 (16188): Guest Log: -rw-------. 1 atlas atlas        95 Jul 26 06:14 pilot_heartbeat.json
2025-07-26 02:15:15 (16188): Guest Log: -rw-------. 1 atlas atlas      7755 Jul 26 06:14 heartbeat.json
2025-07-26 02:15:15 (16188): Guest Log: -rw-------. 1 atlas atlas      4726 Jul 26 06:15 pilotlog.txt
2025-07-26 02:15:15 (16188): Guest Log: -rw-------. 1 atlas atlas    802282 Jul 26 06:15 log.45743349._025915.job.log.1
2025-07-26 02:15:15 (16188): Guest Log: -rw-------. 1 atlas atlas       357 Jul 26 06:15 output.list
2025-07-26 02:15:15 (16188): Guest Log: -rw-r--r--. 1 atlas atlas       620 Jul 26 06:15 runtime_log
2025-07-26 02:15:15 (16188): Guest Log: -rw-------. 1 atlas atlas   1105920 Jul 26 06:15 result.tar.gz
2025-07-26 02:15:15 (16188): Guest Log: -rw-r--r--. 1 atlas atlas      8580 Jul 26 06:15 runtime_log.err
2025-07-26 02:15:15 (16188): Guest Log: -rw-------. 1 atlas atlas       651 Jul 26 06:15 dsQKDmgFdz7n9Rq4apOajLDm4fhM0noT9bVof3QYDmMUzKDmpGUMKn.diag
2025-07-26 02:15:15 (16188): Guest Log: Looking for outputfile HITS.45743349._025915.pool.root.1
2025-07-26 02:15:15 (16188): Guest Log: HITS file was successfully produced
2025-07-26 02:15:15 (16188): Guest Log: -rw-------. 1 atlas atlas 202663161 Jul 26 06:14 /home/atlas/RunAtlas/HITS.45743349._025915.pool.root.1
2025-07-26 02:15:16 (16188): Guest Log: Successfully finished the ATLAS job!
2025-07-26 02:15:16 (16188): Guest Log: Copying the results back to the shared directory!
2025-07-26 02:15:16 (16188): Guest Log:  *** Contents of shared directory: ***
2025-07-26 02:15:16 (16188): Guest Log: total 426400
2025-07-26 02:15:16 (16188): Guest Log: -rwxrwxrwx. 1 root root 232287902 Jul 26 03:38 ATLAS.root_0
2025-07-26 02:15:16 (16188): Guest Log: -rwxrwxrwx. 1 root root 202663161 Jul 26  2025 HITS.pool.root.1
2025-07-26 02:15:16 (16188): Guest Log: -rwxrwxrwx. 1 root root      8488 Jul 26 03:38 init_data.xml
2025-07-26 02:15:16 (16188): Guest Log: -rwxrwxrwx. 1 root root    542895 Jul 26 01:37 input.tar.gz
2025-07-26 02:15:16 (16188): Guest Log: -rwxrwxrwx. 1 root root   1105920 Jul 26  2025 result.tar.gz
2025-07-26 02:15:16 (16188): Guest Log: -rwxrwxrwx. 1 root root     15095 Jul 26 01:37 start_atlas.sh
2025-07-26 02:15:16 (16188): Guest Log:  *** Success! Shutting down the machine. ***
2025-07-26 02:15:16 (16188): VM Completion File Detected.
2025-07-26 02:15:16 (16188): Powering off VM.
2025-07-26 02:15:17 (16188): Successfully stopped VM.
2025-07-26 02:15:17 (16188): Deregistering VM. (boinc_c8dc63316b32aa0d, slot#4)
2025-07-26 02:15:17 (16188): Removing network bandwidth throttle group from VM.
2025-07-26 02:15:17 (16188): Removing VM from VirtualBox.
02:15:22 (16188): called boinc_finish(0)

</stderr_txt>
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