Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
21:20:22 (31361): wrapper (7.7.26015): starting
21:20:22 (31361): wrapper: running run_atlas (--nthreads 12)
[2025-07-25 21:20:22] Arguments: --nthreads 12
[2025-07-25 21:20:22] Threads: 12
[2025-07-25 21:20:22] Checking for CVMFS
[2025-07-25 21:20:22] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-25 21:20:23] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-25 21:20:23] Running cvmfs_config stat atlas.cern.ch
[2025-07-25 21:20:23] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-25 21:20:23] 2.11.2.0 3035 109848 97948 148759 2 56 14611827 20275200 1 130560 0 35951524 99.970 10062151 11065 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-07-25 21:20:23] CVMFS is ok
[2025-07-25 21:20:23] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-25 21:20:23] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-25 21:20:23] Further information can be found at the LHC@home message board.
[2025-07-25 21:20:23] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-25 21:20:23] Checking for apptainer binary...
[2025-07-25 21:20:23] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-25 21:20:23] Running /usr/bin/apptainer --version
[2025-07-25 21:20:23] apptainer version 1.3.2-1.el7
[2025-07-25 21:20:23] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-25 21:20:24] c-205-31.aglt2.org
[2025-07-25 21:20:24] apptainer works
[2025-07-25 21:20:24] Set ATHENA_PROC_NUMBER=12
[2025-07-25 21:20:24] Set ATHENA_CORE_NUMBER=12
[2025-07-25 21:20:24] Starting ATLAS job with PandaID=6745058664
[2025-07-25 21:20:24] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-25 22:42:22]  *** The last 200 lines of the pilot log: ***
[2025-07-25 22:42:22]  is_tar=False
[2025-07-25 22:42:22]  lfn=log.45743349._024087.job.log.tgz.1
[2025-07-25 22:42:22]  mtime=0
[2025-07-25 22:42:22]  protocol_id=None
[2025-07-25 22:42:22]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-07-25 22:42:22]  replicas=None
[2025-07-25 22:42:22]  scope=mc23_13p6TeV
[2025-07-25 22:42:22]  status=None
[2025-07-25 22:42:22]  status_code=0
[2025-07-25 22:42:22]  storage_token=
[2025-07-25 22:42:22]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6745058664/log.45743349._024087.job.log.tgz.1
[2025-07-25 22:42:22]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/fb/1f/log.45743349._024087.job.log.tgz.1
[2025-07-25 22:42:22]  workdir=None
[2025-07-25 22:42:22] ]
[2025-07-25 22:42:22] 2025-07-26 02:41:44,819 | INFO     | monitor loop #365: job 0:6745058664 is in state 'stageout'
[2025-07-25 22:42:22] 2025-07-26 02:41:44,820 | WARNING  | aborting job monitor tasks since payload process 10130 is not running
[2025-07-25 22:42:22] 2025-07-26 02:41:44,820 | INFO     | transferring file log.45743349._024087.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6745058664/log.45743349._024087.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-07-25 22:42:22] 2025-07-26 02:41:44,820 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6745058664/log.45743349._024087.job.log.tgz.1 /tmp/boinchome/slots/0/log.45743349._024087.job
[2025-07-25 22:42:22] 2025-07-26 02:41:44,843 | INFO     | adding to output.list: log.45743349._024087.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/fb/1f/log.45743349._024087.job.log.tg
[2025-07-25 22:42:22] 2025-07-26 02:41:44,844 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-25 22:42:22] 2025-07-26 02:41:44,844 | INFO     | summary of transferred files:
[2025-07-25 22:42:22] 2025-07-26 02:41:44,845 | INFO     |  -- lfn=log.45743349._024087.job.log.tgz.1, status_code=0, status=transferred
[2025-07-25 22:42:22] 2025-07-26 02:41:44,845 | INFO     | stage-out finished correctly
[2025-07-25 22:42:22] 2025-07-26 02:41:46,005 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-25 22:42:22] 2025-07-26 02:41:46,089 | INFO     | job 6745058664 has state=finished
[2025-07-25 22:42:22] 2025-07-26 02:41:46,090 | INFO     | preparing for final server update for job 6745058664 in state='finished'
[2025-07-25 22:42:22] 2025-07-26 02:41:46,090 | INFO     | this job has now completed (state=finished)
[2025-07-25 22:42:22] 2025-07-26 02:41:46,091 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-25 22:42:22] 2025-07-26 02:41:46,091 | INFO     | log transfer has been attempted: DONE
[2025-07-25 22:42:22] 2025-07-26 02:41:46,091 | INFO     | job 6745058664 has finished - writing final server update
[2025-07-25 22:42:22] 2025-07-26 02:41:46,091 | INFO     | total number of processed events: 400 (read)
[2025-07-25 22:42:22] 2025-07-26 02:41:46,092 | INFO     | executing command: lscpu
[2025-07-25 22:42:22] 2025-07-26 02:41:46,120 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-25 22:42:22] 2025-07-26 02:41:47,323 | INFO     | monitor loop #366: job 0:6745058664 is in state 'finished'
[2025-07-25 22:42:22] 2025-07-26 02:41:47,323 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-25 22:42:22] 2025-07-26 02:41:49,826 | INFO     | monitor loop #367: job 0:6745058664 is in state 'finished'
[2025-07-25 22:42:22] 2025-07-26 02:41:49,827 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-25 22:42:22] 2025-07-26 02:41:51,117 | INFO     | CPU arch script returned: x86-64-v2
[2025-07-25 22:42:22] 2025-07-26 02:41:51,120 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1695.8333333333333
[2025-07-25 22:42:22] 2025-07-26 02:41:51,123 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6745058664/memory_monitor_summary.json (trf name=prmon)
[2025-07-25 22:42:22] 2025-07-26 02:41:51,124 | INFO     | extracted standard info from prmon json
[2025-07-25 22:42:22] 2025-07-26 02:41:51,124 | INFO     | extracted standard memory fields from prmon json
[2025-07-25 22:42:22] 2025-07-26 02:41:51,125 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-25 22:42:22] 2025-07-26 02:41:51,125 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-25 22:42:22] 2025-07-26 02:41:51,125 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-25 22:42:22] 2025-07-26 02:41:51,127 | INFO     | fitting pss+swap vs Time
[2025-07-25 22:42:22] 2025-07-26 02:41:51,127 | INFO     | sum of square deviations: 120605052.0
[2025-07-25 22:42:22] 2025-07-26 02:41:51,127 | INFO     | sum of deviations: -9090454606.0
[2025-07-25 22:42:22] 2025-07-26 02:41:51,127 | INFO     | mean x: 1753495369.0
[2025-07-25 22:42:22] 2025-07-26 02:41:51,127 | INFO     | mean y: 2823179.4246575343
[2025-07-25 22:42:22] 2025-07-26 02:41:51,127 | INFO     | -- intersect: 132170338464.98431
[2025-07-25 22:42:22] 2025-07-26 02:41:51,128 | INFO     | intersect: 132170338464.98431
[2025-07-25 22:42:22] 2025-07-26 02:41:51,128 | INFO     | chi2: 0.09697117161098304
[2025-07-25 22:42:22] 2025-07-26 02:41:51,128 | INFO     | -- intersect: 132170338464.98431
[2025-07-25 22:42:22] 2025-07-26 02:41:51,128 | INFO     | current memory leak: -75.37 B/s (using 73 data points, chi2=0.10)
[2025-07-25 22:42:22] 2025-07-26 02:41:51,128 | INFO     | could have reported an average CPU frequency of 2041 MHz (6 samples)
[2025-07-25 22:42:22] 2025-07-26 02:41:51,128 | INFO     | ..............................
[2025-07-25 22:42:22] 2025-07-26 02:41:51,129 | INFO     | . Timing measurements:
[2025-07-25 22:42:22] 2025-07-26 02:41:51,129 | INFO     | . get job = 0 s
[2025-07-25 22:42:22] 2025-07-26 02:41:51,129 | INFO     | . initial setup = 2 s
[2025-07-25 22:42:22] 2025-07-26 02:41:51,129 | INFO     | . payload setup = 9 s
[2025-07-25 22:42:22] 2025-07-26 02:41:51,129 | INFO     | . stage-in = 0 s
[2025-07-25 22:42:22] 2025-07-26 02:41:51,129 | INFO     | . payload execution = 4837 s
[2025-07-25 22:42:22] 2025-07-26 02:41:51,129 | INFO     | . stage-out = 0 s
[2025-07-25 22:42:22] 2025-07-26 02:41:51,129 | INFO     | . log creation = 0 s
[2025-07-25 22:42:22] 2025-07-26 02:41:51,129 | INFO     | ..............................
[2025-07-25 22:42:22] 2025-07-26 02:41:51,348 | INFO     | 
[2025-07-25 22:42:22] 2025-07-26 02:41:51,348 | INFO     | job summary report
[2025-07-25 22:42:22] 2025-07-26 02:41:51,348 | INFO     | --------------------------------------------------
[2025-07-25 22:42:22] 2025-07-26 02:41:51,348 | INFO     | PanDA job id: 6745058664
[2025-07-25 22:42:22] 2025-07-26 02:41:51,348 | INFO     | task id: 45743349
[2025-07-25 22:42:22] 2025-07-26 02:41:51,349 | INFO     | errors: (none)
[2025-07-25 22:42:22] 2025-07-26 02:41:51,349 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-25 22:42:22] 2025-07-26 02:41:51,349 | INFO     | pilot state: finished 
[2025-07-25 22:42:22] 2025-07-26 02:41:51,349 | INFO     | transexitcode: 0
[2025-07-25 22:42:22] 2025-07-26 02:41:51,349 | INFO     | exeerrorcode: 0
[2025-07-25 22:42:22] 2025-07-26 02:41:51,349 | INFO     | exeerrordiag: 
[2025-07-25 22:42:22] 2025-07-26 02:41:51,350 | INFO     | exitcode: 0
[2025-07-25 22:42:22] 2025-07-26 02:41:51,350 | INFO     | exitmsg: OK
[2025-07-25 22:42:22] 2025-07-26 02:41:51,350 | INFO     | cpuconsumptiontime: 51537 s
[2025-07-25 22:42:22] 2025-07-26 02:41:51,350 | INFO     | nevents: 400
[2025-07-25 22:42:22] 2025-07-26 02:41:51,350 | INFO     | neventsw: 0
[2025-07-25 22:42:22] 2025-07-26 02:41:51,350 | INFO     | pid: 10130
[2025-07-25 22:42:22] 2025-07-26 02:41:51,350 | INFO     | pgrp: 10130
[2025-07-25 22:42:22] 2025-07-26 02:41:51,351 | INFO     | corecount: 12
[2025-07-25 22:42:22] 2025-07-26 02:41:51,351 | INFO     | event service: False
[2025-07-25 22:42:22] 2025-07-26 02:41:51,351 | INFO     | sizes: {0: 2397302, 1: 2397501, 5: 2397763, 11: 2397819, 4850: 2424036, 4851: 2433034, 4852: 2433218, 4857: 2433412}
[2025-07-25 22:42:22] 2025-07-26 02:41:51,351 | INFO     | --------------------------------------------------
[2025-07-25 22:42:22] 2025-07-26 02:41:51,351 | INFO     | 
[2025-07-25 22:42:22] 2025-07-26 02:41:51,351 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-07-25 22:42:22] 2025-07-26 02:41:51,377 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-25 22:42:22] 2025-07-26 02:41:51,378 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-25 22:42:22] 2025-07-26 02:41:51,378 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-25 22:42:22] 2025-07-26 02:41:51,378 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-25 22:42:22] 2025-07-26 02:41:51,378 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-25 22:42:22] 2025-07-26 02:41:51,378 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-25 22:42:22] 2025-07-26 02:41:51,379 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-25 22:42:22] 2025-07-26 02:41:51,379 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-25 22:42:22] 2025-07-26 02:41:51,379 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-25 22:42:22] 2025-07-26 02:41:51,379 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-25 22:42:22] 2025-07-26 02:41:51,379 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-25 22:42:22] 2025-07-26 02:41:51,379 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-25 22:42:22] 2025-07-26 02:41:51,380 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-25 22:42:22] 2025-07-26 02:41:51,380 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-25 22:42:22] 2025-07-26 02:41:51,380 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-25 22:42:22] 2025-07-26 02:41:51,380 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-25 22:42:22] 2025-07-26 02:41:51,380 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-25 22:42:22] 2025-07-26 02:41:51,381 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-25 22:42:22] 2025-07-26 02:41:51,381 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-25 22:42:22] 2025-07-26 02:41:51,381 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-25 22:42:22] 2025-07-26 02:41:51,381 | INFO     | job 6745058664 has completed (purged errors)
[2025-07-25 22:42:22] 2025-07-26 02:41:51,381 | INFO     | overall cleanup function is called
[2025-07-25 22:42:22] 2025-07-26 02:41:52,390 | INFO     | --- collectZombieJob: --- 10, [10130]
[2025-07-25 22:42:22] 2025-07-26 02:41:52,390 | INFO     | zombie collector waiting for pid 10130
[2025-07-25 22:42:22] 2025-07-26 02:41:52,397 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-25 22:42:22] 2025-07-26 02:41:52,398 | INFO     | collected zombie processes
[2025-07-25 22:42:22] 2025-07-26 02:41:52,398 | INFO     | will attempt to kill all subprocesses of pid=10130
[2025-07-25 22:42:22] 2025-07-26 02:41:52,489 | INFO     | process IDs to be killed: [10130] (in reverse order)
[2025-07-25 22:42:22] 2025-07-26 02:41:52,546 | WARNING  | found no corresponding commands to process id(s)
[2025-07-25 22:42:22] 2025-07-26 02:41:52,546 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-25 22:42:22] 2025-07-26 02:41:52,550 | INFO     | did not find any defunct processes belonging to 10130
[2025-07-25 22:42:22] 2025-07-26 02:41:52,554 | INFO     | did not find any defunct processes belonging to 10130
[2025-07-25 22:42:22] 2025-07-26 02:41:52,554 | INFO     | ready for new job
[2025-07-25 22:42:22] 2025-07-26 02:41:52,554 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-25 22:42:22] 2025-07-26 02:41:52,556 | INFO     | ***************************************
[2025-07-25 22:42:22] 2025-07-26 02:41:52,556 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-25 22:42:22] 2025-07-26 02:41:52,556 | INFO     | ***************************************
[2025-07-25 22:42:22] 2025-07-26 02:41:52,556 | INFO     | 
[2025-07-25 22:42:22] 2025-07-26 02:41:52,556 | INFO     | architecture information:
[2025-07-25 22:42:22] 2025-07-26 02:41:52,557 | INFO     | executing command: cat /etc/os-release
[2025-07-25 22:42:22] 2025-07-26 02:41:52,573 | INFO     | cat /etc/os-release:
[2025-07-25 22:42:22] NAME="CentOS Linux"
[2025-07-25 22:42:22] VERSION="7 (Core)"
[2025-07-25 22:42:22] ID="centos"
[2025-07-25 22:42:22] ID_LIKE="rhel fedora"
[2025-07-25 22:42:22] VERSION_ID="7"
[2025-07-25 22:42:22] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-25 22:42:22] ANSI_COLOR="0;31"
[2025-07-25 22:42:22] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-25 22:42:22] HOME_URL="https://www.centos.org/"
[2025-07-25 22:42:22] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-25 22:42:22] 
[2025-07-25 22:42:22] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-25 22:42:22] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-25 22:42:22] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-25 22:42:22] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-25 22:42:22] 
[2025-07-25 22:42:22] 2025-07-26 02:41:52,573 | INFO     | ***************************************
[2025-07-25 22:42:22] 2025-07-26 02:41:53,076 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-07-25 22:42:22] 2025-07-26 02:41:53,096 | INFO     | sufficient remaining disk space (29522657280 B)
[2025-07-25 22:42:22] 2025-07-26 02:41:53,096 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-25 22:42:22] 2025-07-26 02:41:53,096 | INFO     | current server update state: UPDATING_FINAL
[2025-07-25 22:42:22] 2025-07-26 02:41:53,097 | INFO     | update_server=False
[2025-07-25 22:42:22] 2025-07-26 02:41:53,097 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-25 22:42:22] 2025-07-26 02:41:53,097 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-25 22:42:22] 2025-07-26 02:41:53,098 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-25 22:42:22] 2025-07-26 02:41:53,333 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-25 22:42:22] 2025-07-26 02:41:53,333 | INFO     | aborting loop
[2025-07-25 22:42:22] 2025-07-26 02:41:53,501 | INFO     | all data control threads have been joined
[2025-07-25 22:42:22] 2025-07-26 02:41:54,102 | INFO     | [job] retrieve thread has finished
[2025-07-25 22:42:22] 2025-07-26 02:41:54,103 | INFO     | [job] queue monitor thread has finished
[2025-07-25 22:42:22] 2025-07-26 02:41:54,220 | INFO     | [job] create_data_payload thread has finished
[2025-07-25 22:42:22] 2025-07-26 02:41:54,268 | INFO     | [payload] validate_pre thread has finished
[2025-07-25 22:42:22] 2025-07-26 02:41:54,334 | INFO     | [job] job monitor thread has finished
[2025-07-25 22:42:22] 2025-07-26 02:41:54,357 | INFO     | all payload control threads have been joined
[2025-07-25 22:42:22] 2025-07-26 02:41:54,506 | INFO     | [data] control thread has finished
[2025-07-25 22:42:22] 2025-07-26 02:41:54,534 | INFO     | [payload] validate_post thread has finished
[2025-07-25 22:42:22] 2025-07-26 02:41:54,622 | INFO     | all job control threads have been joined
[2025-07-25 22:42:22] 2025-07-26 02:41:54,759 | INFO     | [payload] failed_post thread has finished
[2025-07-25 22:42:22] 2025-07-26 02:41:54,884 | INFO     | [data] copytool_in thread has finished
[2025-07-25 22:42:22] 2025-07-26 02:41:55,103 | INFO     | [data] copytool_out thread has finished
[2025-07-25 22:42:22] 2025-07-26 02:41:55,356 | INFO     | [payload] execute_payloads thread has finished
[2025-07-25 22:42:22] 2025-07-26 02:41:55,362 | INFO     | [payload] control thread has finished
[2025-07-25 22:42:22] 2025-07-26 02:41:55,402 | INFO     | [job] validate thread has finished
[2025-07-25 22:42:22] 2025-07-26 02:41:55,627 | INFO     | [job] control thread has finished
[2025-07-25 22:42:22] 2025-07-26 02:41:56,598 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-25 22:42:22] 2025-07-26 02:42:00,605 | INFO     | [data] queue_monitor thread has finished
[2025-07-25 22:42:22] 2025-07-26 02:42:03,579 | INFO     | job.realtimelogging is not enabled
[2025-07-25 22:42:22] 2025-07-26 02:42:04,584 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-25 22:42:22] 2025-07-26 02:42:05,664 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140418509973312)>', '<ExcThread(monitor, started 140417597150976)>']
[2025-07-25 22:42:22] 2025-07-26 02:42:10,689 | INFO     | all workflow threads have been joined
[2025-07-25 22:42:22] 2025-07-26 02:42:10,690 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-25 22:42:22] 2025-07-26 02:42:10,699 | INFO     | traces error code: 0
[2025-07-25 22:42:22] 2025-07-26 02:42:10,699 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-25 22:42:22] 2025-07-26 02:42:22,675 | INFO     | PID=3514 has CPU usage=3.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-07-25 22:42:22] 2025-07-26 02:42:22,675 | INFO     | found 0 job(s) in 20 queues
[2025-07-25 22:42:22] 2025-07-26 02:42:22,675 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-25 22:42:22] 2025-07-26 02:42:22,675 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-25 22:42:22] 2025-07-26 02:42:22,676 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-25 22:42:22] 2025-07-26 02:42:22,676 | INFO     | [monitor] control thread has ended
[2025-07-25 22:42:22] 2025-07-26 02:42:22,765 [wrapper] ==== pilot stdout END ====
[2025-07-25 22:42:22] 2025-07-26 02:42:22,769 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-25 22:42:22] 2025-07-26 02:42:22,773 [wrapper] pilotpid: 3514
[2025-07-25 22:42:22] 2025-07-26 02:42:22,776 [wrapper] Pilot exit status: 0
[2025-07-25 22:42:22] 2025-07-26 02:42:22,791 [wrapper] pandaids: 6745058664
[2025-07-25 22:42:22] 2025-07-26 02:42:22,828 [wrapper] cleanup supervisor_pilot 19882 3515
[2025-07-25 22:42:22] 2025-07-26 02:42:22,832 [wrapper] Test setup, not cleaning
[2025-07-25 22:42:22] 2025-07-26 02:42:22,835 [wrapper] apfmon messages muted
[2025-07-25 22:42:22] 2025-07-26 02:42:22,839 [wrapper] ==== wrapper stdout END ====
[2025-07-25 22:42:22] 2025-07-26 02:42:22,843 [wrapper] ==== wrapper stderr END ====
[2025-07-25 22:42:22]  *** Error codes and diagnostics ***
[2025-07-25 22:42:22]     "exeErrorCode": 0,
[2025-07-25 22:42:22]     "exeErrorDiag": "",
[2025-07-25 22:42:22]     "pilotErrorCode": 0,
[2025-07-25 22:42:22]     "pilotErrorDiag": "",
[2025-07-25 22:42:22]  *** Listing of results directory ***
[2025-07-25 22:42:22] total 346892
[2025-07-25 22:42:22] -rw-r--r-- 1 boincer umatlas    530466 Jul 25 12:23 pilot3.tar.gz
[2025-07-25 22:42:22] -rw-r--r-- 1 boincer umatlas      5112 Jul 25 12:52 queuedata.json
[2025-07-25 22:42:22] -rwx------ 1 boincer umatlas     36292 Jul 25 12:54 runpilot2-wrapper.sh
[2025-07-25 22:42:22] -rw-r--r-- 1 boincer umatlas       100 Jul 25 21:20 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-25 22:42:22] -rwxr-xr-x 1 boincer umatlas      7986 Jul 25 21:20 run_atlas
[2025-07-25 22:42:22] -rw-r--r-- 1 boincer umatlas       105 Jul 25 21:20 job.xml
[2025-07-25 22:42:22] -rw-r--r-- 2 boincer umatlas 144567935 Jul 25 21:20 EVNT.45743347._001366.pool.root.1
[2025-07-25 22:42:22] -rw-r--r-- 2 boincer umatlas     15095 Jul 25 21:20 start_atlas.sh
[2025-07-25 22:42:22] drwxrwx--x 2 boincer umatlas      4096 Jul 25 21:20 shared
[2025-07-25 22:42:22] -rw-r--r-- 2 boincer umatlas    542891 Jul 25 21:20 input.tar.gz
[2025-07-25 22:42:22] -rw-r--r-- 1 boincer umatlas         0 Jul 25 21:20 boinc_lockfile
[2025-07-25 22:42:22] -rw-r--r-- 1 boincer umatlas      2562 Jul 25 21:20 pandaJob.out
[2025-07-25 22:42:22] -rw------- 1 boincer umatlas    979985 Jul 25 21:20 agis_schedconf.cvmfs.json
[2025-07-25 22:42:22] -rw------- 1 boincer umatlas   1593052 Jul 25 21:20 agis_ddmendpoints.agis.ALL.json
[2025-07-25 22:42:22] drwx------ 4 boincer umatlas      4096 Jul 25 21:20 pilot3
[2025-07-25 22:42:22] -rw-r--r-- 1 boincer umatlas      5868 Jul 25 22:36 init_data.xml
[2025-07-25 22:42:22] -rw------- 1 boincer umatlas 205138698 Jul 25 22:41 HITS.45743349._024087.pool.root.1
[2025-07-25 22:42:22] -rw-r--r-- 1 boincer umatlas       529 Jul 25 22:41 boinc_task_state.xml
[2025-07-25 22:42:22] -rw------- 1 boincer umatlas        95 Jul 25 22:41 pilot_heartbeat.json
[2025-07-25 22:42:22] -rw------- 1 boincer umatlas      1049 Jul 25 22:41 memory_monitor_summary.json
[2025-07-25 22:42:22] -rw------- 1 boincer umatlas    356187 Jul 25 22:41 log.45743349._024087.job.log.tgz.1
[2025-07-25 22:42:22] -rw------- 1 boincer umatlas      7854 Jul 25 22:41 heartbeat.json
[2025-07-25 22:42:22] -rw-r--r-- 1 boincer umatlas      8192 Jul 25 22:42 boinc_mmap_file
[2025-07-25 22:42:22] -rw-r--r-- 1 boincer umatlas        27 Jul 25 22:42 wrapper_checkpoint.txt
[2025-07-25 22:42:22] -rw------- 1 boincer umatlas       744 Jul 25 22:42 pilotlog.txt
[2025-07-25 22:42:22] -rw------- 1 boincer umatlas    465504 Jul 25 22:42 log.45743349._024087.job.log.1
[2025-07-25 22:42:22] -rw------- 1 boincer umatlas       357 Jul 25 22:42 output.list
[2025-07-25 22:42:22] -rw-r--r-- 1 boincer umatlas       620 Jul 25 22:42 runtime_log
[2025-07-25 22:42:22] -rw------- 1 boincer umatlas    839680 Jul 25 22:42 result.tar.gz
[2025-07-25 22:42:22] -rw-r--r-- 1 boincer umatlas      8662 Jul 25 22:42 runtime_log.err
[2025-07-25 22:42:22] -rw------- 1 boincer umatlas       659 Jul 25 22:42 Q1xMDmpraz7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmb0PLDmsNSjTo.diag
[2025-07-25 22:42:22] -rw-r--r-- 1 boincer umatlas     21563 Jul 25 22:42 stderr.txt
[2025-07-25 22:42:23] HITS file was successfully produced:
[2025-07-25 22:42:23] -rw------- 1 boincer umatlas 205138698 Jul 25 22:41 shared/HITS.pool.root.1
[2025-07-25 22:42:23]  *** Contents of shared directory: ***
[2025-07-25 22:42:23] total 342884
[2025-07-25 22:42:23] -rw-r--r-- 2 boincer umatlas 144567935 Jul 25 21:20 ATLAS.root_0
[2025-07-25 22:42:23] -rw-r--r-- 2 boincer umatlas     15095 Jul 25 21:20 start_atlas.sh
[2025-07-25 22:42:23] -rw-r--r-- 2 boincer umatlas    542891 Jul 25 21:20 input.tar.gz
[2025-07-25 22:42:23] -rw------- 1 boincer umatlas 205138698 Jul 25 22:41 HITS.pool.root.1
[2025-07-25 22:42:23] -rw------- 1 boincer umatlas    839680 Jul 25 22:42 result.tar.gz
22:42:24 (31361): run_atlas exited; CPU time 51508.999400
22:42:24 (31361): called boinc_finish(0)

</stderr_txt>
]]>

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