Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
18:42:08 (1800855): wrapper (7.7.26015): starting
18:42:08 (1800855): wrapper: running run_atlas (--nthreads 12)
[2025-07-25 18:42:08] Arguments: --nthreads 12
[2025-07-25 18:42:08] Threads: 12
[2025-07-25 18:42:08] Checking for CVMFS
[2025-07-25 18:42:08] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-25 18:42:09] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-25 18:42:09] Running cvmfs_config stat atlas.cern.ch
[2025-07-25 18:42:09] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-25 18:42:09] 2.11.5.0 7157 35054 152616 148759 2 442 35180701 45568000 20382 130560 0 264774748 99.726 215371011 28569 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-07-25 18:42:09] CVMFS is ok
[2025-07-25 18:42:09] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-25 18:42:09] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-25 18:42:09] Further information can be found at the LHC@home message board.
[2025-07-25 18:42:09] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-25 18:42:09] Checking for apptainer binary...
[2025-07-25 18:42:09] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-25 18:42:09] Running /usr/bin/apptainer --version
[2025-07-25 18:42:10] apptainer version 1.4.1-1.el9
[2025-07-25 18:42:10] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-25 18:42:11] wns0083.triumf.lcg
[2025-07-25 18:42:11] apptainer works
[2025-07-25 18:42:11] Set ATHENA_PROC_NUMBER=12
[2025-07-25 18:42:11] Set ATHENA_CORE_NUMBER=12
[2025-07-25 18:42:11] Starting ATLAS job with PandaID=6745063254
[2025-07-25 18:42:11] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-25 18:48:05]  *** The last 200 lines of the pilot log: ***
[2025-07-25 18:48:05] 2025-07-26 01:47:29,083 | INFO     | extracted standard memory fields from prmon json
[2025-07-25 18:48:05] 2025-07-26 01:47:29,083 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-25 18:48:05] 2025-07-26 01:47:29,083 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-25 18:48:05] 2025-07-26 01:47:29,084 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-25 18:48:05] 2025-07-26 01:47:29,085 | WARNING  | wrong length of table data, x=[1753494266.0], y=[1900.0] (must be same and length>=4)
[2025-07-25 18:48:05] 2025-07-26 01:47:29,085 | INFO     | could have reported an average CPU frequency of 2551 MHz (4 samples)
[2025-07-25 18:48:05] 2025-07-26 01:47:29,085 | INFO     | ..............................
[2025-07-25 18:48:05] 2025-07-26 01:47:29,085 | INFO     | . Timing measurements:
[2025-07-25 18:48:05] 2025-07-26 01:47:29,085 | INFO     | . get job = 0 s
[2025-07-25 18:48:05] 2025-07-26 01:47:29,085 | INFO     | . initial setup = 5 s
[2025-07-25 18:48:05] 2025-07-26 01:47:29,085 | INFO     | . payload setup = 24 s
[2025-07-25 18:48:05] 2025-07-26 01:47:29,085 | INFO     | . stage-in = 0 s
[2025-07-25 18:48:05] 2025-07-26 01:47:29,085 | INFO     | . payload execution = 55 s
[2025-07-25 18:48:05] 2025-07-26 01:47:29,085 | INFO     | . stage-out = 1 s
[2025-07-25 18:48:05] 2025-07-26 01:47:29,085 | INFO     | . log creation = 0 s
[2025-07-25 18:48:05] 2025-07-26 01:47:29,085 | INFO     | ..............................
[2025-07-25 18:48:05] 2025-07-26 01:47:29,085 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-07-25 18:48:05] 2025-07-26 01:47:29,086 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6745063254/pilotlog.txt
[2025-07-25 18:48:05] 2025-07-26 01:47:29,146 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-07-25 18:48:05] - Log from pilotlog.txt -
[2025-07-25 18:48:05] 2025-07-26 01:47:29,070 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6745063254/memory_monitor_summary.json (trf name=prmon)
[2025-07-25 18:48:05] 2025-07-26 01:47:29,083 | INFO     | extracted standard info from prmon json
[2025-07-25 18:48:05] 2025-07-26 01:47:29,083 | INFO     | extracted standard memory fields from prmon json
[2025-07-25 18:48:05] 2025-07-26 01:47:29,083 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-25 18:48:05] 2025-07-26 01:47:29,083 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-25 18:48:05] 2025-07-26 01:47:29,084 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-25 18:48:05] 2025-07-26 01:47:29,085 | WARNING  | wrong length of table data, x=[1753494266.0], y=[1900.0] (must be same and length>=4)
[2025-07-25 18:48:05] 2025-07-26 01:47:29,085 | INFO     | could have reported an average CPU frequency of 2551 MHz (4 samples)
[2025-07-25 18:48:05] 2025-07-26 01:47:29,085 | INFO     | ..............................
[2025-07-25 18:48:05] 2025-07-26 01:47:29,085 | INFO     | . Timing measurements:
[2025-07-25 18:48:05] 2025-07-26 01:47:29,085 | INFO     | . get job = 0 s
[2025-07-25 18:48:05] 2025-07-26 01:47:29,085 | INFO     | . initial setup = 5 s
[2025-07-25 18:48:05] 2025-07-26 01:47:29,085 | INFO     | . payload setup = 24 s
[2025-07-25 18:48:05] 2025-07-26 01:47:29,085 | INFO     | . stage-in = 0 s
[2025-07-25 18:48:05] 2025-07-26 01:47:29,085 | INFO     | . payload execution = 55 s
[2025-07-25 18:48:05] 2025-07-26 01:47:29,085 | INFO     | . stage-out = 1 s
[2025-07-25 18:48:05] 2025-07-26 01:47:29,085 | INFO     | . log creation = 0 s
[2025-07-25 18:48:05] 2025-07-26 01:47:29,085 | INFO     | ..............................
[2025-07-25 18:48:05] 2025-07-26 01:47:29,085 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-07-25 18:48:05] 2025-07-26 01:47:29,086 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6745063254/pilotlog.txt
[2025-07-25 18:48:05] 2025-07-26 01:47:29,146 | WARNING  | 
[2025-07-25 18:48:05] [begin log extracts]
[2025-07-25 18:48:05] - Log from pilotlog.txt -
[2025-07-25 18:48:05] 2025-07-26 01:47:29,070 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6745063254/memory_monitor_summary.json (trf name=prmon)
[2025-07-25 18:48:05] 2025-07-26 01:47:29,083 | INFO     | extracted standard info from prmon json
[2025-07-25 18:48:05] 2025-07-26 01:47:29,083 | INFO     | extracted standard memory fields from prmon json
[2025-07-25 18:48:05] 2025-07-26 01:47:29,083 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-25 18:48:05] 2025-07-26 01:47:29,083 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-25 18:48:05] 2025-07-26 01:47:29,084 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-25 18:48:05] 2025-07-26 01:47:29,085 | WARNING  | wrong length of table data, x=[1753494266.0], y=[1900.0] (must be same and length>=4)
[2025-07-25 18:48:05] 2025-07-26 01:47:29,085 | INFO     | could have reported an average CPU frequency of 2551 MHz (4 samples)
[2025-07-25 18:48:05] 2025-07-26 01:47:29,085 | INFO     | ..............................
[2025-07-25 18:48:05] 2025-07-26 01:47:29,085 | INFO     | . Timing measurements:
[2025-07-25 18:48:05] 2025-07-26 01:47:29,085 | INFO     | . get job = 0 s
[2025-07-25 18:48:05] 2025-07-26 01:47:29,085 | INFO     | . initial setup = 5 s
[2025-07-25 18:48:05] 2025-07-26 01:47:29,085 | INFO     | . payload setup = 24 s
[2025-07-25 18:48:05] 2025-07-26 01:47:29,085 | INFO     | . stage-in = 0 s
[2025-07-25 18:48:05] 2025-07-26 01:47:29,085 | INFO     | . payload execution = 55 s
[2025-07-25 18:48:05] 2025-07-26 01:47:29,085 | INFO     | . stage-out = 1 s
[2025-07-25 18:48:05] 2025-07-26 01:47:29,085 | INFO     | . log creation = 0 s
[2025-07-25 18:48:05] 2025-07-26 01:47:29,085 | INFO     | ..............................
[2025-07-25 18:48:05] 2025-07-26 01:47:29,085 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-07-25 18:48:05] 2025-07-26 01:47:29,086 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6745063254/pilotlog.txt
[2025-07-25 18:48:05] [end log extracts]
[2025-07-25 18:48:05] 2025-07-26 01:47:29,146 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-07-25 18:48:05] 2025-07-26 01:47:29,147 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-07-25 18:48:05] 2025-07-26 01:47:29,463 | INFO     | 
[2025-07-25 18:48:05] 2025-07-26 01:47:29,466 | INFO     | job summary report
[2025-07-25 18:48:05] 2025-07-26 01:47:29,467 | INFO     | --------------------------------------------------
[2025-07-25 18:48:05] 2025-07-26 01:47:29,467 | INFO     | PanDA job id: 6745063254
[2025-07-25 18:48:05] 2025-07-26 01:47:29,467 | INFO     | task id: 45743349
[2025-07-25 18:48:05] 2025-07-26 01:47:29,467 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-07-25 18:44:49,649 CRITICAL Transform executor raised TransformValidationExceptio
[2025-07-25 18:48:05] 2025-07-26 01:47:29,467 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-25 18:48:05] 2025-07-26 01:47:29,467 | INFO     | pilot state: failed 
[2025-07-25 18:48:05] 2025-07-26 01:47:29,467 | INFO     | transexitcode: 65
[2025-07-25 18:48:05] 2025-07-26 01:47:29,467 | INFO     | exeerrorcode: 65
[2025-07-25 18:48:05] 2025-07-26 01:47:29,467 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2025-07-25 18:48:05] 2025-07-26 01:47:29,467 | INFO     | exitcode: 65
[2025-07-25 18:48:05] 2025-07-26 01:47:29,467 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2025-07-25 18:48:05] 2025-07-26 01:47:29,467 | INFO     | cpuconsumptiontime: 17 s
[2025-07-25 18:48:05] 2025-07-26 01:47:29,467 | INFO     | nevents: 0
[2025-07-25 18:48:05] 2025-07-26 01:47:29,467 | INFO     | neventsw: 0
[2025-07-25 18:48:05] 2025-07-26 01:47:29,467 | INFO     | pid: 1810813
[2025-07-25 18:48:05] 2025-07-26 01:47:29,467 | INFO     | pgrp: 1810813
[2025-07-25 18:48:05] 2025-07-26 01:47:29,467 | INFO     | corecount: 12
[2025-07-25 18:48:05] 2025-07-26 01:47:29,467 | INFO     | event service: False
[2025-07-25 18:48:05] 2025-07-26 01:47:29,467 | INFO     | sizes: {0: 2397472, 1: 2397472, 12: 2397500, 22: 2397790, 23: 2397818, 85: 2421297, 87: 2425589, 90: 2425617, 231: 2425783}
[2025-07-25 18:48:05] 2025-07-26 01:47:29,468 | INFO     | --------------------------------------------------
[2025-07-25 18:48:05] 2025-07-26 01:47:29,468 | INFO     | 
[2025-07-25 18:48:05] 2025-07-26 01:47:29,468 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-07-25 18:48:05] 2025-07-26 01:47:29,623 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-25 18:48:05] 2025-07-26 01:47:29,623 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-25 18:48:05] 2025-07-26 01:47:29,623 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-25 18:48:05] 2025-07-26 01:47:29,623 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-25 18:48:05] 2025-07-26 01:47:29,623 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-25 18:48:05] 2025-07-26 01:47:29,623 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-25 18:48:05] 2025-07-26 01:47:29,623 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-25 18:48:05] 2025-07-26 01:47:29,623 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-25 18:48:05] 2025-07-26 01:47:29,623 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-25 18:48:05] 2025-07-26 01:47:29,623 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-25 18:48:05] 2025-07-26 01:47:29,624 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-25 18:48:05] 2025-07-26 01:47:29,624 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-25 18:48:05] 2025-07-26 01:47:29,624 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-25 18:48:05] 2025-07-26 01:47:29,624 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-25 18:48:05] 2025-07-26 01:47:29,624 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-25 18:48:05] 2025-07-26 01:47:29,624 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-25 18:48:05] 2025-07-26 01:47:29,624 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-25 18:48:05] 2025-07-26 01:47:29,624 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-25 18:48:05] 2025-07-26 01:47:29,624 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-25 18:48:05] 2025-07-26 01:47:29,624 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-25 18:48:05] 2025-07-26 01:47:29,624 | INFO     | job 6745063254 has completed (purged errors)
[2025-07-25 18:48:05] 2025-07-26 01:47:29,624 | INFO     | overall cleanup function is called
[2025-07-25 18:48:05] 2025-07-26 01:47:30,631 | INFO     | --- collectZombieJob: --- 10, [1810813]
[2025-07-25 18:48:05] 2025-07-26 01:47:30,632 | INFO     | zombie collector waiting for pid 1810813
[2025-07-25 18:48:05] 2025-07-26 01:47:30,632 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-25 18:48:05] 2025-07-26 01:47:30,632 | INFO     | collected zombie processes
[2025-07-25 18:48:05] 2025-07-26 01:47:30,632 | INFO     | will attempt to kill all subprocesses of pid=1810813
[2025-07-25 18:48:05] 2025-07-26 01:47:31,131 | INFO     | process IDs to be killed: [1810813] (in reverse order)
[2025-07-25 18:48:05] 2025-07-26 01:47:31,384 | WARNING  | found no corresponding commands to process id(s)
[2025-07-25 18:48:05] 2025-07-26 01:47:31,384 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-25 18:48:05] 2025-07-26 01:47:31,428 | INFO     | did not find any defunct processes belonging to 1810813
[2025-07-25 18:48:05] 2025-07-26 01:47:31,466 | INFO     | did not find any defunct processes belonging to 1810813
[2025-07-25 18:48:05] 2025-07-26 01:47:31,466 | INFO     | ready for new job
[2025-07-25 18:48:05] 2025-07-26 01:47:31,467 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-25 18:48:05] 2025-07-26 01:47:31,479 | INFO     | ***************************************
[2025-07-25 18:48:05] 2025-07-26 01:47:31,479 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-25 18:48:05] 2025-07-26 01:47:31,480 | INFO     | ***************************************
[2025-07-25 18:48:05] 2025-07-26 01:47:31,480 | INFO     | 
[2025-07-25 18:48:05] 2025-07-26 01:47:31,481 | INFO     | architecture information:
[2025-07-25 18:48:05] 2025-07-26 01:47:31,483 | INFO     | executing command: cat /etc/os-release
[2025-07-25 18:48:05] 2025-07-26 01:47:31,612 | INFO     | cat /etc/os-release:
[2025-07-25 18:48:05] NAME="CentOS Linux"
[2025-07-25 18:48:05] VERSION="7 (Core)"
[2025-07-25 18:48:05] ID="centos"
[2025-07-25 18:48:05] ID_LIKE="rhel fedora"
[2025-07-25 18:48:05] VERSION_ID="7"
[2025-07-25 18:48:05] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-25 18:48:05] ANSI_COLOR="0;31"
[2025-07-25 18:48:05] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-25 18:48:05] HOME_URL="https://www.centos.org/"
[2025-07-25 18:48:05] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-25 18:48:05] 
[2025-07-25 18:48:05] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-25 18:48:05] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-25 18:48:05] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-25 18:48:05] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-25 18:48:05] 
[2025-07-25 18:48:05] 2025-07-26 01:47:31,613 | INFO     | ***************************************
[2025-07-25 18:48:05] 2025-07-26 01:47:32,116 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-07-25 18:48:05] 2025-07-26 01:47:32,186 | INFO     | sufficient remaining disk space (2077669457920 B)
[2025-07-25 18:48:05] 2025-07-26 01:47:32,186 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-25 18:48:05] 2025-07-26 01:47:32,186 | INFO     | current server update state: UPDATING_FINAL
[2025-07-25 18:48:05] 2025-07-26 01:47:32,186 | INFO     | update_server=False
[2025-07-25 18:48:05] 2025-07-26 01:47:32,187 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-25 18:48:05] 2025-07-26 01:47:32,317 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-25 18:48:05] 2025-07-26 01:47:32,318 | INFO     | aborting loop
[2025-07-25 18:48:05] 2025-07-26 01:47:32,538 | INFO     | all job control threads have been joined
[2025-07-25 18:48:05] 2025-07-26 01:47:32,717 | INFO     | all payload control threads have been joined
[2025-07-25 18:48:05] 2025-07-26 01:47:33,126 | INFO     | all data control threads have been joined
[2025-07-25 18:48:05] 2025-07-26 01:47:33,192 | INFO     | [job] retrieve thread has finished
[2025-07-25 18:48:05] 2025-07-26 01:47:33,322 | INFO     | [job] job monitor thread has finished
[2025-07-25 18:48:05] 2025-07-26 01:47:33,517 | INFO     | [job] create_data_payload thread has finished
[2025-07-25 18:48:05] 2025-07-26 01:47:33,544 | INFO     | [job] control thread has finished
[2025-07-25 18:48:05] 2025-07-26 01:47:33,568 | INFO     | [job] validate thread has finished
[2025-07-25 18:48:05] 2025-07-26 01:47:33,580 | INFO     | [payload] execute_payloads thread has finished
[2025-07-25 18:48:05] 2025-07-26 01:47:33,652 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-25 18:48:05] 2025-07-26 01:47:33,683 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-25 18:48:05] 2025-07-26 01:47:33,723 | INFO     | [payload] control thread has finished
[2025-07-25 18:48:05] 2025-07-26 01:47:33,741 | INFO     | [payload] validate_pre thread has finished
[2025-07-25 18:48:05] 2025-07-26 01:47:34,060 | INFO     | [payload] validate_post thread has finished
[2025-07-25 18:48:05] 2025-07-26 01:47:34,081 | INFO     | [payload] failed_post thread has finished
[2025-07-25 18:48:05] 2025-07-26 01:47:34,132 | INFO     | [data] control thread has finished
[2025-07-25 18:48:05] 2025-07-26 01:47:34,476 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-25 18:48:05] 2025-07-26 01:47:34,539 | INFO     | [data] copytool_in thread has finished
[2025-07-25 18:48:05] 2025-07-26 01:47:34,685 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-25 18:48:05] 2025-07-26 01:47:35,482 | INFO     | [job] queue monitor thread has finished
[2025-07-25 18:48:05] 2025-07-26 01:47:35,690 | INFO     | [data] copytool_out thread has finished
[2025-07-25 18:48:05] 2025-07-26 01:47:37,661 | INFO     | [data] queue_monitor thread has finished
[2025-07-25 18:48:05] 2025-07-26 01:47:38,036 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140606979069760)>', '<ExcThread(monitor, started 140606575712000)>']
[2025-07-25 18:48:05] 2025-07-26 01:47:43,062 | INFO     | all workflow threads have been joined
[2025-07-25 18:48:05] 2025-07-26 01:47:43,062 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-25 18:48:05] 2025-07-26 01:47:43,063 | INFO     | traces error code: 0
[2025-07-25 18:48:05] 2025-07-26 01:47:43,063 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-25 18:48:05] 2025-07-26 01:48:03,545 | INFO     | PID=1804453 has CPU usage=1.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-25 18:48:05] 2025-07-26 01:48:03,545 | INFO     | .. there are 35 such processes running
[2025-07-25 18:48:05] 2025-07-26 01:48:03,546 | INFO     | found 0 job(s) in 20 queues
[2025-07-25 18:48:05] 2025-07-26 01:48:03,554 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-25 18:48:05] 2025-07-26 01:48:03,555 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-25 18:48:05] 2025-07-26 01:48:03,555 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-25 18:48:05] 2025-07-26 01:48:03,555 | INFO     | [monitor] control thread has ended
[2025-07-25 18:48:05] 2025-07-26 01:48:04,180 [wrapper] ==== pilot stdout END ====
[2025-07-25 18:48:05] 2025-07-26 01:48:04,210 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-25 18:48:05] 2025-07-26 01:48:04,237 [wrapper] pilotpid: 1804453
[2025-07-25 18:48:05] 2025-07-26 01:48:04,271 [wrapper] Pilot exit status: 0
[2025-07-25 18:48:05] 2025-07-26 01:48:04,367 [wrapper] pandaids: 6745063254
[2025-07-25 18:48:05] 2025-07-26 01:48:04,901 [wrapper] cleanup supervisor_pilot 1804459 1804454
[2025-07-25 18:48:05] 2025-07-26 01:48:04,934 [wrapper] Test setup, not cleaning
[2025-07-25 18:48:05] 2025-07-26 01:48:04,967 [wrapper] apfmon messages muted
[2025-07-25 18:48:05] 2025-07-26 01:48:05,000 [wrapper] ==== wrapper stdout END ====
[2025-07-25 18:48:05] 2025-07-26 01:48:05,015 [wrapper] ==== wrapper stderr END ====
[2025-07-25 18:48:05]  *** Error codes and diagnostics ***
[2025-07-25 18:48:05]     "exeErrorCode": 65,
[2025-07-25 18:48:05]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2025-07-25 18:48:05]     "pilotErrorCode": 1305,
[2025-07-25 18:48:05]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2025-07-25 18:48:05]  *** Listing of results directory ***
[2025-07-25 18:48:05] total 145036
[2025-07-25 18:48:05] -rw-r--r--. 1 boinc boinc      5112 Jul 25 15:10 queuedata.json
[2025-07-25 18:48:05] -rw-r--r--. 1 boinc boinc    530466 Jul 25 15:10 pilot3.tar.gz
[2025-07-25 18:48:05] -rwx------. 1 boinc boinc     36292 Jul 25 15:11 runpilot2-wrapper.sh
[2025-07-25 18:48:05] -rw-r--r--. 1 boinc boinc       100 Jul 25 18:42 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-25 18:48:05] -rwxr-xr-x. 1 boinc boinc      7986 Jul 25 18:42 run_atlas
[2025-07-25 18:48:05] -rw-r--r--. 1 boinc boinc       105 Jul 25 18:42 job.xml
[2025-07-25 18:48:05] -rw-r--r--. 2 boinc boinc 144435081 Jul 25 18:42 EVNT.45743347._001554.pool.root.1
[2025-07-25 18:48:05] -rw-r--r--. 1 boinc boinc      6596 Jul 25 18:42 init_data.xml
[2025-07-25 18:48:05] -rw-r--r--. 2 boinc boinc    542897 Jul 25 18:42 input.tar.gz
[2025-07-25 18:48:05] -rw-r--r--. 2 boinc boinc     15095 Jul 25 18:42 start_atlas.sh
[2025-07-25 18:48:05] drwxrwx--x. 2 boinc boinc      4096 Jul 25 18:42 shared
[2025-07-25 18:48:05] -rw-r--r--. 1 boinc boinc         0 Jul 25 18:42 boinc_lockfile
[2025-07-25 18:48:05] -rw-r--r--. 1 boinc boinc      2563 Jul 25 18:42 pandaJob.out
[2025-07-25 18:48:05] -rw-------. 1 boinc boinc    979985 Jul 25 18:42 agis_schedconf.cvmfs.json
[2025-07-25 18:48:05] -rw-------. 1 boinc boinc   1593052 Jul 25 18:42 agis_ddmendpoints.agis.ALL.json
[2025-07-25 18:48:05] drwx------. 4 boinc boinc      4096 Jul 25 18:42 pilot3
[2025-07-25 18:48:05] -rw-r--r--. 1 boinc boinc       525 Jul 25 18:44 boinc_task_state.xml
[2025-07-25 18:48:05] -rw-------. 1 boinc boinc       955 Jul 25 18:44 memory_monitor_summary.json
[2025-07-25 18:48:05] -rw-------. 1 boinc boinc     22181 Jul 25 18:45 log.45743349._027924.job.log.tgz.1
[2025-07-25 18:48:05] -rw-------. 1 boinc boinc      8390 Jul 25 18:47 heartbeat.json
[2025-07-25 18:48:05] -rw-r--r--. 1 boinc boinc      8192 Jul 25 18:48 boinc_mmap_file
[2025-07-25 18:48:05] -rw-r--r--. 1 boinc boinc        23 Jul 25 18:48 wrapper_checkpoint.txt
[2025-07-25 18:48:05] -rw-------. 1 boinc boinc        95 Jul 25 18:48 pilot_heartbeat.json
[2025-07-25 18:48:05] -rw-------. 1 boinc boinc       823 Jul 25 18:48 pilotlog.txt
[2025-07-25 18:48:05] -rw-------. 1 boinc boinc     82917 Jul 25 18:48 log.45743349._027924.job.log.1
[2025-07-25 18:48:05] -rw-------. 1 boinc boinc       188 Jul 25 18:48 output.list
[2025-07-25 18:48:05] -rw-r--r--. 1 boinc boinc       620 Jul 25 18:48 runtime_log
[2025-07-25 18:48:05] -rw-------. 1 boinc boinc    122880 Jul 25 18:48 result.tar.gz
[2025-07-25 18:48:05] -rw-r--r--. 1 boinc boinc      8485 Jul 25 18:48 runtime_log.err
[2025-07-25 18:48:05] -rw-------. 1 boinc boinc       644 Jul 25 18:48 qg3NDmQofz7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmDaQLDmlfLhum.diag
[2025-07-25 18:48:05] -rw-r--r--. 1 boinc boinc     21817 Jul 25 18:48 stderr.txt
[2025-07-25 18:48:05] No HITS result produced
[2025-07-25 18:48:05]  *** Contents of shared directory: ***
[2025-07-25 18:48:05] total 141720
[2025-07-25 18:48:05] -rw-r--r--. 2 boinc boinc 144435081 Jul 25 18:42 ATLAS.root_0
[2025-07-25 18:48:05] -rw-r--r--. 2 boinc boinc    542897 Jul 25 18:42 input.tar.gz
[2025-07-25 18:48:05] -rw-r--r--. 2 boinc boinc     15095 Jul 25 18:42 start_atlas.sh
[2025-07-25 18:48:05] -rw-------. 1 boinc boinc    122880 Jul 25 18:48 result.tar.gz
18:48:07 (1800855): run_atlas exited; CPU time 29.602615
18:48:07 (1800855): called boinc_finish(0)

</stderr_txt>
]]>

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