Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
21:06:34 (1803583): wrapper (7.7.26015): starting
21:06:34 (1803583): wrapper: running run_atlas (--nthreads 12)
[2025-07-25 21:06:34] Arguments: --nthreads 12
[2025-07-25 21:06:34] Threads: 12
[2025-07-25 21:06:34] Checking for CVMFS
[2025-07-25 21:06:34] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-25 21:06:34] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-25 21:06:34] Running cvmfs_config stat atlas.cern.ch
[2025-07-25 21:06:35] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-25 21:06:35] 2.12.6.0 240040 16243 328704 148758 0 562 31641953 32935937 14031 16776704 1 54602040 99.760 50406579 9987 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-07-25 21:06:35] CVMFS is ok
[2025-07-25 21:06:35] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-25 21:06:35] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-25 21:06:35] Further information can be found at the LHC@home message board.
[2025-07-25 21:06:35] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-25 21:06:35] Checking for apptainer binary...
[2025-07-25 21:06:35] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-25 21:06:35] Running /usr/bin/apptainer --version
[2025-07-25 21:06:36] apptainer version 1.4.1-1.el9
[2025-07-25 21:06:36] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-25 21:06:36] c6-1-24-2.aglt2.org
[2025-07-25 21:06:36] apptainer works
[2025-07-25 21:06:36] Set ATHENA_PROC_NUMBER=12
[2025-07-25 21:06:36] Set ATHENA_CORE_NUMBER=12
[2025-07-25 21:06:36] Starting ATLAS job with PandaID=6745060000
[2025-07-25 21:06:36] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-26 01:21:47]  *** The last 200 lines of the pilot log: ***
[2025-07-26 01:21:47] 2025-07-26 05:21:10,504 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-26 01:21:47] 2025-07-26 05:21:13,006 | INFO     | monitor loop #925: job 0:6745060000 is in state 'finished'
[2025-07-26 01:21:47] 2025-07-26 05:21:13,007 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-26 01:21:47] 2025-07-26 05:21:13,350 | INFO     | 15235s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-07-26 01:21:47] 2025-07-26 05:21:14,789 | INFO     | CPU arch script returned: x86-64-v4
[2025-07-26 01:21:47] 2025-07-26 05:21:14,793 | INFO     | found 28 cores (14 cores per socket, 2 sockets) HT, CPU MHz: 2844.3055892857146
[2025-07-26 01:21:47] 2025-07-26 05:21:14,803 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6745060000/memory_monitor_summary.json (trf name=prmon)
[2025-07-26 01:21:47] 2025-07-26 05:21:14,804 | INFO     | extracted standard info from prmon json
[2025-07-26 01:21:47] 2025-07-26 05:21:14,804 | INFO     | extracted standard memory fields from prmon json
[2025-07-26 01:21:47] 2025-07-26 05:21:14,804 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-26 01:21:47] 2025-07-26 05:21:14,805 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-26 01:21:47] 2025-07-26 05:21:14,805 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-26 01:21:47] 2025-07-26 05:21:14,810 | INFO     | fitting pss+swap vs Time
[2025-07-26 01:21:47] 2025-07-26 05:21:14,810 | INFO     | sum of square deviations: 4729580525.274187
[2025-07-26 01:21:47] 2025-07-26 05:21:14,812 | INFO     | sum of deviations: 49252768533.32257
[2025-07-26 01:21:47] 2025-07-26 05:21:14,812 | INFO     | mean x: 1753499724.8951614
[2025-07-26 01:21:47] 2025-07-26 05:21:14,812 | INFO     | mean y: 2319209.935483871
[2025-07-26 01:21:47] 2025-07-26 05:21:14,812 | INFO     | -- intersect: -18258225380.009815
[2025-07-26 01:21:47] 2025-07-26 05:21:14,813 | INFO     | intersect: -18258225380.009815
[2025-07-26 01:21:47] 2025-07-26 05:21:14,813 | INFO     | chi2: 2.740878615525488
[2025-07-26 01:21:47] 2025-07-26 05:21:14,813 | INFO     | sum of square deviations: 4449270274.477338
[2025-07-26 01:21:47] 2025-07-26 05:21:14,815 | INFO     | sum of deviations: 62949868856.25513
[2025-07-26 01:21:47] 2025-07-26 05:21:14,815 | INFO     | mean x: 1753499572.4032922
[2025-07-26 01:21:47] 2025-07-26 05:21:14,815 | INFO     | mean y: 2326524.181069959
[2025-07-26 01:21:47] 2025-07-26 05:21:14,815 | INFO     | -- intersect: -24806813247.678146
[2025-07-26 01:21:47] 2025-07-26 05:21:14,815 | INFO     | intersect: -24806813247.678146
[2025-07-26 01:21:47] 2025-07-26 05:21:14,816 | INFO     | chi2: 2.0634630282930453
[2025-07-26 01:21:47] 2025-07-26 05:21:14,816 | INFO     | current chi2=2.0634630282930453 (change=24.71527135113814 %)
[2025-07-26 01:21:47] 2025-07-26 05:21:14,816 | INFO     | right removable region: 242
[2025-07-26 01:21:47] 2025-07-26 05:21:14,816 | INFO     | sum of square deviations: 4449210494.477338
[2025-07-26 01:21:47] 2025-07-26 05:21:14,818 | INFO     | sum of deviations: 3122729330.3127575
[2025-07-26 01:21:47] 2025-07-26 05:21:14,818 | INFO     | mean x: 1753499877.4032922
[2025-07-26 01:21:47] 2025-07-26 05:21:14,818 | INFO     | mean y: 2344157.609053498
[2025-07-26 01:21:47] 2025-07-26 05:21:14,818 | INFO     | -- intersect: -1228369809.4338415
[2025-07-26 01:21:47] 2025-07-26 05:21:14,818 | INFO     | intersect: -1228369809.4338415
[2025-07-26 01:21:47] 2025-07-26 05:21:14,818 | INFO     | chi2: 0.9429592696265012
[2025-07-26 01:21:47] 2025-07-26 05:21:14,819 | INFO     | current chi2=0.9429592696265012 (change=65.59646004441116 %)
[2025-07-26 01:21:47] 2025-07-26 05:21:14,819 | INFO     | sum of square deviations: 4180172402.7773046
[2025-07-26 01:21:47] 2025-07-26 05:21:14,820 | INFO     | sum of deviations: -10274976887.075628
[2025-07-26 01:21:47] 2025-07-26 05:21:14,821 | INFO     | mean x: 1753500029.9033613
[2025-07-26 01:21:47] 2025-07-26 05:21:14,821 | INFO     | mean y: 2351698.344537815
[2025-07-26 01:21:47] 2025-07-26 05:21:14,821 | INFO     | -- intersect: 4312502223.900101
[2025-07-26 01:21:47] 2025-07-26 05:21:14,821 | INFO     | intersect: 4312502223.900101
[2025-07-26 01:21:47] 2025-07-26 05:21:14,821 | INFO     | chi2: 0.7667591654389935
[2025-07-26 01:21:47] 2025-07-26 05:21:14,821 | INFO     | current chi2=0.7667591654389935 (change=18.68586585476796 %)
[2025-07-26 01:21:47] 2025-07-26 05:21:14,821 | INFO     | left removable region: 20
[2025-07-26 01:21:47] 2025-07-26 05:21:14,822 | INFO     | sum of square deviations: 3392542534.1982045
[2025-07-26 01:21:47] 2025-07-26 05:21:14,823 | INFO     | sum of deviations: 679312811.1891892
[2025-07-26 01:21:47] 2025-07-26 05:21:14,823 | INFO     | mean x: 1753500151.90991
[2025-07-26 01:21:47] 2025-07-26 05:21:14,823 | INFO     | mean y: 2362033.9594594594
[2025-07-26 01:21:47] 2025-07-26 05:21:14,823 | INFO     | -- intersect: -348753716.4274739
[2025-07-26 01:21:47] 2025-07-26 05:21:14,823 | INFO     | intersect: -348753716.4274739
[2025-07-26 01:21:47] 2025-07-26 05:21:14,824 | INFO     | chi2: 0.06763117466122297
[2025-07-26 01:21:47] 2025-07-26 05:21:14,824 | INFO     | -- intersect: -348753716.4274739
[2025-07-26 01:21:47] 2025-07-26 05:21:14,824 | INFO     | current memory leak: 0.20 B/s (using 222 data points, chi2=0.07)
[2025-07-26 01:21:47] 2025-07-26 05:21:14,825 | INFO     | could have reported an average CPU frequency of 2722 MHz (12 samples)
[2025-07-26 01:21:47] 2025-07-26 05:21:14,825 | INFO     | ..............................
[2025-07-26 01:21:47] 2025-07-26 05:21:14,825 | INFO     | . Timing measurements:
[2025-07-26 01:21:47] 2025-07-26 05:21:14,825 | INFO     | . get job = 0 s
[2025-07-26 01:21:47] 2025-07-26 05:21:14,825 | INFO     | . initial setup = 3 s
[2025-07-26 01:21:47] 2025-07-26 05:21:14,825 | INFO     | . payload setup = 43 s
[2025-07-26 01:21:47] 2025-07-26 05:21:14,825 | INFO     | . stage-in = 0 s
[2025-07-26 01:21:47] 2025-07-26 05:21:14,825 | INFO     | . payload execution = 15107 s
[2025-07-26 01:21:47] 2025-07-26 05:21:14,825 | INFO     | . stage-out = 2 s
[2025-07-26 01:21:47] 2025-07-26 05:21:14,826 | INFO     | . log creation = 0 s
[2025-07-26 01:21:47] 2025-07-26 05:21:14,826 | INFO     | ..............................
[2025-07-26 01:21:47] 2025-07-26 05:21:15,230 | INFO     | 
[2025-07-26 01:21:47] 2025-07-26 05:21:15,230 | INFO     | job summary report
[2025-07-26 01:21:47] 2025-07-26 05:21:15,230 | INFO     | --------------------------------------------------
[2025-07-26 01:21:47] 2025-07-26 05:21:15,230 | INFO     | PanDA job id: 6745060000
[2025-07-26 01:21:47] 2025-07-26 05:21:15,230 | INFO     | task id: 45743349
[2025-07-26 01:21:47] 2025-07-26 05:21:15,230 | INFO     | errors: (none)
[2025-07-26 01:21:47] 2025-07-26 05:21:15,230 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-26 01:21:47] 2025-07-26 05:21:15,233 | INFO     | pilot state: finished 
[2025-07-26 01:21:47] 2025-07-26 05:21:15,234 | INFO     | transexitcode: 0
[2025-07-26 01:21:47] 2025-07-26 05:21:15,234 | INFO     | exeerrorcode: 0
[2025-07-26 01:21:47] 2025-07-26 05:21:15,235 | INFO     | exeerrordiag: 
[2025-07-26 01:21:47] 2025-07-26 05:21:15,235 | INFO     | exitcode: 0
[2025-07-26 01:21:47] 2025-07-26 05:21:15,235 | INFO     | exitmsg: OK
[2025-07-26 01:21:47] 2025-07-26 05:21:15,235 | INFO     | cpuconsumptiontime: 49335 s
[2025-07-26 01:21:47] 2025-07-26 05:21:15,235 | INFO     | nevents: 400
[2025-07-26 01:21:47] 2025-07-26 05:21:15,235 | INFO     | neventsw: 0
[2025-07-26 01:21:47] 2025-07-26 05:21:15,235 | INFO     | pid: 1818163
[2025-07-26 01:21:47] 2025-07-26 05:21:15,235 | INFO     | pgrp: 1818163
[2025-07-26 01:21:47] 2025-07-26 05:21:15,235 | INFO     | corecount: 12
[2025-07-26 01:21:47] 2025-07-26 05:21:15,235 | INFO     | event service: False
[2025-07-26 01:21:47] 2025-07-26 05:21:15,236 | INFO     | sizes: {0: 2396596, 1: 2397281, 2: 2397480, 3: 2397480, 14: 2397508, 25: 2397536, 31: 2397954, 35: 2397982, 15155: 2428828, 15158: 2437826, 15160: 2437882, 15165: 
[2025-07-26 01:21:47] 2025-07-26 05:21:15,236 | INFO     | --------------------------------------------------
[2025-07-26 01:21:47] 2025-07-26 05:21:15,236 | INFO     | 
[2025-07-26 01:21:47] 2025-07-26 05:21:15,236 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-07-26 01:21:47] 2025-07-26 05:21:15,259 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-26 01:21:47] 2025-07-26 05:21:15,259 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-26 01:21:47] 2025-07-26 05:21:15,260 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-26 01:21:47] 2025-07-26 05:21:15,260 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-26 01:21:47] 2025-07-26 05:21:15,260 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-26 01:21:47] 2025-07-26 05:21:15,260 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-26 01:21:47] 2025-07-26 05:21:15,260 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-26 01:21:47] 2025-07-26 05:21:15,260 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-26 01:21:47] 2025-07-26 05:21:15,260 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-26 01:21:47] 2025-07-26 05:21:15,260 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-26 01:21:47] 2025-07-26 05:21:15,260 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-26 01:21:47] 2025-07-26 05:21:15,260 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-26 01:21:47] 2025-07-26 05:21:15,260 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-26 01:21:47] 2025-07-26 05:21:15,260 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-26 01:21:47] 2025-07-26 05:21:15,260 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-26 01:21:47] 2025-07-26 05:21:15,261 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-26 01:21:47] 2025-07-26 05:21:15,261 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-26 01:21:47] 2025-07-26 05:21:15,261 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-26 01:21:47] 2025-07-26 05:21:15,261 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-26 01:21:47] 2025-07-26 05:21:15,261 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-26 01:21:47] 2025-07-26 05:21:15,261 | INFO     | job 6745060000 has completed (purged errors)
[2025-07-26 01:21:47] 2025-07-26 05:21:15,261 | INFO     | overall cleanup function is called
[2025-07-26 01:21:47] 2025-07-26 05:21:16,269 | INFO     | --- collectZombieJob: --- 10, [1818163]
[2025-07-26 01:21:47] 2025-07-26 05:21:16,270 | INFO     | zombie collector waiting for pid 1818163
[2025-07-26 01:21:47] 2025-07-26 05:21:16,270 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-26 01:21:47] 2025-07-26 05:21:16,270 | INFO     | collected zombie processes
[2025-07-26 01:21:47] 2025-07-26 05:21:16,270 | INFO     | will attempt to kill all subprocesses of pid=1818163
[2025-07-26 01:21:47] 2025-07-26 05:21:16,585 | INFO     | process IDs to be killed: [1818163] (in reverse order)
[2025-07-26 01:21:47] 2025-07-26 05:21:16,689 | WARNING  | found no corresponding commands to process id(s)
[2025-07-26 01:21:47] 2025-07-26 05:21:16,689 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-26 01:21:47] 2025-07-26 05:21:16,704 | INFO     | did not find any defunct processes belonging to 1818163
[2025-07-26 01:21:47] 2025-07-26 05:21:16,719 | INFO     | did not find any defunct processes belonging to 1818163
[2025-07-26 01:21:47] 2025-07-26 05:21:16,719 | INFO     | ready for new job
[2025-07-26 01:21:47] 2025-07-26 05:21:16,720 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-26 01:21:47] 2025-07-26 05:21:16,722 | INFO     | ***************************************
[2025-07-26 01:21:47] 2025-07-26 05:21:16,722 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-26 01:21:47] 2025-07-26 05:21:16,723 | INFO     | ***************************************
[2025-07-26 01:21:47] 2025-07-26 05:21:16,723 | INFO     | 
[2025-07-26 01:21:47] 2025-07-26 05:21:16,737 | INFO     | architecture information:
[2025-07-26 01:21:47] 2025-07-26 05:21:16,738 | INFO     | executing command: cat /etc/os-release
[2025-07-26 01:21:47] 2025-07-26 05:21:16,755 | INFO     | cat /etc/os-release:
[2025-07-26 01:21:47] NAME="CentOS Linux"
[2025-07-26 01:21:47] VERSION="7 (Core)"
[2025-07-26 01:21:47] ID="centos"
[2025-07-26 01:21:47] ID_LIKE="rhel fedora"
[2025-07-26 01:21:47] VERSION_ID="7"
[2025-07-26 01:21:47] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-26 01:21:47] ANSI_COLOR="0;31"
[2025-07-26 01:21:47] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-26 01:21:47] HOME_URL="https://www.centos.org/"
[2025-07-26 01:21:47] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-26 01:21:47] 
[2025-07-26 01:21:47] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-26 01:21:47] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-26 01:21:47] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-26 01:21:47] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-26 01:21:47] 
[2025-07-26 01:21:47] 2025-07-26 05:21:16,755 | INFO     | ***************************************
[2025-07-26 01:21:47] 2025-07-26 05:21:17,258 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-07-26 01:21:47] 2025-07-26 05:21:17,275 | INFO     | sufficient remaining disk space (76289146880 B)
[2025-07-26 01:21:47] 2025-07-26 05:21:17,275 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-26 01:21:47] 2025-07-26 05:21:17,276 | INFO     | current server update state: UPDATING_FINAL
[2025-07-26 01:21:47] 2025-07-26 05:21:17,276 | INFO     | update_server=False
[2025-07-26 01:21:47] 2025-07-26 05:21:17,276 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-26 01:21:47] 2025-07-26 05:21:17,276 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-26 01:21:47] 2025-07-26 05:21:17,276 | INFO     | aborting loop
[2025-07-26 01:21:47] 2025-07-26 05:21:17,336 | INFO     | all data control threads have been joined
[2025-07-26 01:21:47] 2025-07-26 05:21:17,577 | INFO     | all payload control threads have been joined
[2025-07-26 01:21:47] 2025-07-26 05:21:18,051 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-26 01:21:47] 2025-07-26 05:21:18,281 | INFO     | [job] retrieve thread has finished
[2025-07-26 01:21:47] 2025-07-26 05:21:18,282 | INFO     | [job] job monitor thread has finished
[2025-07-26 01:21:47] 2025-07-26 05:21:18,342 | INFO     | [data] control thread has finished
[2025-07-26 01:21:47] 2025-07-26 05:21:18,452 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-26 01:21:47] 2025-07-26 05:21:18,583 | INFO     | [payload] control thread has finished
[2025-07-26 01:21:47] 2025-07-26 05:21:18,697 | INFO     | [payload] validate_post thread has finished
[2025-07-26 01:21:47] 2025-07-26 05:21:18,798 | INFO     | [payload] validate_pre thread has finished
[2025-07-26 01:21:47] 2025-07-26 05:21:18,881 | INFO     | all job control threads have been joined
[2025-07-26 01:21:47] 2025-07-26 05:21:19,151 | INFO     | [job] validate thread has finished
[2025-07-26 01:21:47] 2025-07-26 05:21:19,451 | INFO     | [payload] execute_payloads thread has finished
[2025-07-26 01:21:47] 2025-07-26 05:21:19,452 | INFO     | [data] copytool_in thread has finished
[2025-07-26 01:21:47] 2025-07-26 05:21:19,744 | INFO     | [job] create_data_payload thread has finished
[2025-07-26 01:21:47] 2025-07-26 05:21:19,857 | INFO     | [payload] failed_post thread has finished
[2025-07-26 01:21:47] 2025-07-26 05:21:19,886 | INFO     | [job] control thread has finished
[2025-07-26 01:21:47] 2025-07-26 05:21:19,932 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-26 01:21:47] 2025-07-26 05:21:20,057 | INFO     | [data] copytool_out thread has finished
[2025-07-26 01:21:47] 2025-07-26 05:21:20,281 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-26 01:21:47] 2025-07-26 05:21:20,938 | INFO     | [job] queue monitor thread has finished
[2025-07-26 01:21:47] 2025-07-26 05:21:24,289 | INFO     | [data] queue_monitor thread has finished
[2025-07-26 01:21:47] 2025-07-26 05:21:26,119 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140559880931136)>', '<ExcThread(monitor, started 140559599503104)>']
[2025-07-26 01:21:47] 2025-07-26 05:21:31,144 | INFO     | all workflow threads have been joined
[2025-07-26 01:21:47] 2025-07-26 05:21:31,145 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-26 01:21:47] 2025-07-26 05:21:31,145 | INFO     | traces error code: 0
[2025-07-26 01:21:47] 2025-07-26 05:21:31,145 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-26 01:21:47] 2025-07-26 05:21:46,787 | INFO     | PID=1807760 has CPU usage=7.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-26 01:21:47] 2025-07-26 05:21:46,788 | INFO     | .. there are 26 such processes running
[2025-07-26 01:21:47] 2025-07-26 05:21:46,788 | INFO     | found 0 job(s) in 20 queues
[2025-07-26 01:21:47] 2025-07-26 05:21:46,789 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-26 01:21:47] 2025-07-26 05:21:46,789 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-26 01:21:47] 2025-07-26 05:21:46,789 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-26 01:21:47] 2025-07-26 05:21:46,789 | INFO     | [monitor] control thread has ended
[2025-07-26 01:21:47] 2025-07-26 05:21:46,983 [wrapper] ==== pilot stdout END ====
[2025-07-26 01:21:47] 2025-07-26 05:21:46,986 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-26 01:21:47] 2025-07-26 05:21:46,989 [wrapper] pilotpid: 1807760
[2025-07-26 01:21:47] 2025-07-26 05:21:46,992 [wrapper] Pilot exit status: 0
[2025-07-26 01:21:47] 2025-07-26 05:21:47,002 [wrapper] pandaids: 6745060000
[2025-07-26 01:21:47] 2025-07-26 05:21:47,072 [wrapper] cleanup supervisor_pilot 2586164 1807761
[2025-07-26 01:21:47] 2025-07-26 05:21:47,075 [wrapper] Test setup, not cleaning
[2025-07-26 01:21:47] 2025-07-26 05:21:47,078 [wrapper] apfmon messages muted
[2025-07-26 01:21:47] 2025-07-26 05:21:47,081 [wrapper] ==== wrapper stdout END ====
[2025-07-26 01:21:47] 2025-07-26 05:21:47,084 [wrapper] ==== wrapper stderr END ====
[2025-07-26 01:21:47]  *** Error codes and diagnostics ***
[2025-07-26 01:21:47]     "exeErrorCode": 0,
[2025-07-26 01:21:47]     "exeErrorDiag": "",
[2025-07-26 01:21:47]     "pilotErrorCode": 0,
[2025-07-26 01:21:47]     "pilotErrorDiag": "",
[2025-07-26 01:21:47]  *** Listing of results directory ***
[2025-07-26 01:21:47] total 423608
[2025-07-26 01:21:47] -rw-r--r--. 1 boincer umatlas    530466 Jul 25 14:32 pilot3.tar.gz
[2025-07-26 01:21:47] -rwx------. 1 boincer umatlas     36292 Jul 25 14:37 runpilot2-wrapper.sh
[2025-07-26 01:21:47] -rw-r--r--. 1 boincer umatlas      5112 Jul 25 14:37 queuedata.json
[2025-07-26 01:21:47] -rw-r--r--. 1 boincer umatlas       100 Jul 25 21:06 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-26 01:21:47] -rwxr-xr-x. 1 boincer umatlas      7986 Jul 25 21:06 run_atlas
[2025-07-26 01:21:47] -rw-r--r--. 1 boincer umatlas       105 Jul 25 21:06 job.xml
[2025-07-26 01:21:47] -rw-r--r--. 2 boincer umatlas 227958761 Jul 25 21:06 EVNT.45743347._001423.pool.root.1
[2025-07-26 01:21:47] -rw-r--r--. 2 boincer umatlas     15095 Jul 25 21:06 start_atlas.sh
[2025-07-26 01:21:47] drwxrwx--x. 2 boincer umatlas      4096 Jul 25 21:06 shared
[2025-07-26 01:21:47] -rw-r--r--. 2 boincer umatlas    542885 Jul 25 21:06 input.tar.gz
[2025-07-26 01:21:47] -rw-r--r--. 1 boincer umatlas         0 Jul 25 21:06 boinc_lockfile
[2025-07-26 01:21:47] -rw-r--r--. 1 boincer umatlas      2562 Jul 25 21:06 pandaJob.out
[2025-07-26 01:21:47] -rw-------. 1 boincer umatlas    979993 Jul 25 21:07 agis_schedconf.cvmfs.json
[2025-07-26 01:21:47] drwx------. 4 boincer umatlas      4096 Jul 25 21:07 pilot3
[2025-07-26 01:21:47] -rw-r--r--. 1 boincer umatlas      6844 Jul 26 01:18 init_data.xml
[2025-07-26 01:21:47] -rw-------. 1 boincer umatlas 198539037 Jul 26 01:20 HITS.45743349._025224.pool.root.1
[2025-07-26 01:21:47] -rw-r--r--. 1 boincer umatlas       531 Jul 26 01:20 boinc_task_state.xml
[2025-07-26 01:21:47] -rw-------. 1 boincer umatlas      1041 Jul 26 01:21 memory_monitor_summary.json
[2025-07-26 01:21:47] -rw-------. 1 boincer umatlas        95 Jul 26 01:21 pilot_heartbeat.json
[2025-07-26 01:21:47] -rw-------. 1 boincer umatlas   1593052 Jul 26 01:21 agis_ddmendpoints.agis.ALL.json
[2025-07-26 01:21:47] -rw-------. 1 boincer umatlas    475762 Jul 26 01:21 log.45743349._025224.job.log.tgz.1
[2025-07-26 01:21:47] -rw-------. 1 boincer umatlas      7827 Jul 26 01:21 heartbeat.json
[2025-07-26 01:21:47] -rw-r--r--. 1 boincer umatlas      8192 Jul 26 01:21 boinc_mmap_file
[2025-07-26 01:21:47] -rw-r--r--. 1 boincer umatlas        28 Jul 26 01:21 wrapper_checkpoint.txt
[2025-07-26 01:21:47] -rw-------. 1 boincer umatlas       823 Jul 26 01:21 pilotlog.txt
[2025-07-26 01:21:47] -rw-------. 1 boincer umatlas   1225446 Jul 26 01:21 log.45743349._025224.job.log.1
[2025-07-26 01:21:47] -rw-------. 1 boincer umatlas       357 Jul 26 01:21 output.list
[2025-07-26 01:21:47] -rw-r--r--. 1 boincer umatlas       620 Jul 26 01:21 runtime_log
[2025-07-26 01:21:47] -rw-------. 1 boincer umatlas   1720320 Jul 26 01:21 result.tar.gz
[2025-07-26 01:21:47] -rw-r--r--. 1 boincer umatlas      8668 Jul 26 01:21 runtime_log.err
[2025-07-26 01:21:47] -rw-------. 1 boincer umatlas       658 Jul 26 01:21 bEeLDmETcz7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmBBQLDmEZcTJn.diag
[2025-07-26 01:21:47] -rw-r--r--. 1 boincer umatlas     21321 Jul 26 01:21 stderr.txt
[2025-07-26 01:21:47] HITS file was successfully produced:
[2025-07-26 01:21:47] -rw-------. 1 boincer umatlas 198539037 Jul 26 01:20 shared/HITS.pool.root.1
[2025-07-26 01:21:47]  *** Contents of shared directory: ***
[2025-07-26 01:21:47] total 418736
[2025-07-26 01:21:47] -rw-r--r--. 2 boincer umatlas 227958761 Jul 25 21:06 ATLAS.root_0
[2025-07-26 01:21:47] -rw-r--r--. 2 boincer umatlas     15095 Jul 25 21:06 start_atlas.sh
[2025-07-26 01:21:47] -rw-r--r--. 2 boincer umatlas    542885 Jul 25 21:06 input.tar.gz
[2025-07-26 01:21:47] -rw-------. 1 boincer umatlas 198539037 Jul 26 01:20 HITS.pool.root.1
[2025-07-26 01:21:47] -rw-------. 1 boincer umatlas   1720320 Jul 26 01:21 result.tar.gz
01:21:48 (1803583): run_atlas exited; CPU time 49757.241267
01:21:48 (1803583): called boinc_finish(0)

</stderr_txt>
]]>

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