Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
22:18:58 (1678206): wrapper (7.7.26015): starting
22:18:58 (1678206): wrapper: running run_atlas (--nthreads 12)
[2025-07-25 22:18:58] Arguments: --nthreads 12
[2025-07-25 22:18:58] Threads: 12
[2025-07-25 22:18:58] Checking for CVMFS
[2025-07-25 22:18:58] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-25 22:18:59] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-25 22:18:59] Running cvmfs_config stat atlas.cern.ch
[2025-07-25 22:18:59] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-25 22:18:59] 2.12.6.0 1364387 16317 319708 148761 2 64 22697404 32935936 12081 16776704 0 44260436 99.766 69926385 31782 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-07-25 22:18:59] CVMFS is ok
[2025-07-25 22:18:59] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-25 22:18:59] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-25 22:18:59] Further information can be found at the LHC@home message board.
[2025-07-25 22:18:59] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-25 22:18:59] Checking for apptainer binary...
[2025-07-25 22:18:59] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-25 22:18:59] Running /usr/bin/apptainer --version
[2025-07-25 22:18:59] apptainer version 1.4.1-1.el9
[2025-07-25 22:18:59] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-25 22:18:59] c6-2-29-2.aglt2.org
[2025-07-25 22:18:59] apptainer works
[2025-07-25 22:18:59] Set ATHENA_PROC_NUMBER=12
[2025-07-25 22:18:59] Set ATHENA_CORE_NUMBER=12
[2025-07-25 22:18:59] Starting ATLAS job with PandaID=6741890407
[2025-07-25 22:18:59] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-26 01:56:14]  *** The last 200 lines of the pilot log: ***
[2025-07-26 01:56:14] 2025-07-26 05:55:51,753 | INFO     | monitor loop #809: job 0:6741890407 is in state 'finished'
[2025-07-26 01:56:14] 2025-07-26 05:55:51,753 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-26 01:56:14] 2025-07-26 05:55:53,651 | INFO     | CPU arch script returned: x86-64-v4
[2025-07-26 01:56:14] 2025-07-26 05:55:53,671 | INFO     | found 28 cores (14 cores per socket, 2 sockets) HT, CPU MHz: 2739.921482142857
[2025-07-26 01:56:14] 2025-07-26 05:55:53,681 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6741890407/memory_monitor_summary.json (trf name=prmon)
[2025-07-26 01:56:14] 2025-07-26 05:55:53,682 | INFO     | extracted standard info from prmon json
[2025-07-26 01:56:14] 2025-07-26 05:55:53,682 | INFO     | extracted standard memory fields from prmon json
[2025-07-26 01:56:14] 2025-07-26 05:55:53,682 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-26 01:56:14] 2025-07-26 05:55:53,683 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-26 01:56:14] 2025-07-26 05:55:53,683 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-26 01:56:14] 2025-07-26 05:55:53,687 | INFO     | fitting pss+swap vs Time
[2025-07-26 01:56:14] 2025-07-26 05:55:53,687 | INFO     | sum of square deviations: 2996487441.3333516
[2025-07-26 01:56:14] 2025-07-26 05:55:53,688 | INFO     | sum of deviations: -73016300407.33337
[2025-07-26 01:56:14] 2025-07-26 05:55:53,689 | INFO     | mean x: 1753502866.6666667
[2025-07-26 01:56:14] 2025-07-26 05:55:53,689 | INFO     | mean y: 2491620.7699530516
[2025-07-26 01:56:14] 2025-07-26 05:55:53,689 | INFO     | -- intersect: 42730617329.41032
[2025-07-26 01:56:14] 2025-07-26 05:55:53,689 | INFO     | intersect: 42730617329.41032
[2025-07-26 01:56:14] 2025-07-26 05:55:53,689 | INFO     | chi2: 2.9866715298749136
[2025-07-26 01:56:14] 2025-07-26 05:55:53,690 | INFO     | sum of square deviations: 2790424559.0576935
[2025-07-26 01:56:14] 2025-07-26 05:55:53,691 | INFO     | sum of deviations: -56437060380.278824
[2025-07-26 01:56:14] 2025-07-26 05:55:53,691 | INFO     | mean x: 1753502714.1826923
[2025-07-26 01:56:14] 2025-07-26 05:55:53,691 | INFO     | mean y: 2503710.533653846
[2025-07-26 01:56:14] 2025-07-26 05:55:53,691 | INFO     | -- intersect: 35467550861.183136
[2025-07-26 01:56:14] 2025-07-26 05:55:53,691 | INFO     | intersect: 35467550861.183136
[2025-07-26 01:56:14] 2025-07-26 05:55:53,691 | INFO     | chi2: 2.3228258565380044
[2025-07-26 01:56:14] 2025-07-26 05:55:53,691 | INFO     | current chi2=2.3228258565380044 (change=22.226939477496277 %)
[2025-07-26 01:56:14] 2025-07-26 05:55:53,691 | INFO     | right removable region: 207
[2025-07-26 01:56:14] 2025-07-26 05:55:53,692 | INFO     | sum of square deviations: 2790337939.0576935
[2025-07-26 01:56:14] 2025-07-26 05:55:53,693 | INFO     | sum of deviations: -110263366871.25963
[2025-07-26 01:56:14] 2025-07-26 05:55:53,693 | INFO     | mean x: 1753503019.1826923
[2025-07-26 01:56:14] 2025-07-26 05:55:53,693 | INFO     | mean y: 2518964.4278846155
[2025-07-26 01:56:14] 2025-07-26 05:55:53,693 | INFO     | -- intersect: 69294178590.17795
[2025-07-26 01:56:14] 2025-07-26 05:55:53,693 | INFO     | intersect: 69294178590.17795
[2025-07-26 01:56:14] 2025-07-26 05:55:53,693 | INFO     | chi2: 1.2962920217555336
[2025-07-26 01:56:14] 2025-07-26 05:55:53,693 | INFO     | current chi2=1.2962920217555336 (change=56.59743601567647 %)
[2025-07-26 01:56:14] 2025-07-26 05:55:53,694 | INFO     | sum of square deviations: 2593875603.064034
[2025-07-26 01:56:14] 2025-07-26 05:55:53,695 | INFO     | sum of deviations: -110623871936.82753
[2025-07-26 01:56:14] 2025-07-26 05:55:53,695 | INFO     | mean x: 1753503171.6945813
[2025-07-26 01:56:14] 2025-07-26 05:55:53,695 | INFO     | mean y: 2519163.793103448
[2025-07-26 01:56:14] 2025-07-26 05:55:53,695 | INFO     | -- intersect: 74786101721.57762
[2025-07-26 01:56:14] 2025-07-26 05:55:53,695 | INFO     | intersect: 74786101721.57762
[2025-07-26 01:56:14] 2025-07-26 05:55:53,696 | INFO     | chi2: 1.2111441151242486
[2025-07-26 01:56:14] 2025-07-26 05:55:53,696 | INFO     | current chi2=1.2111441151242486 (change=6.56857445716371 %)
[2025-07-26 01:56:14] 2025-07-26 05:55:53,696 | INFO     | left removable region: 20
[2025-07-26 01:56:14] 2025-07-26 05:55:53,696 | INFO     | sum of square deviations: 2027588439.679148
[2025-07-26 01:56:14] 2025-07-26 05:55:53,697 | INFO     | sum of deviations: -75621039593.47057
[2025-07-26 01:56:14] 2025-07-26 05:55:53,697 | INFO     | mean x: 1753503293.7433155
[2025-07-26 01:56:14] 2025-07-26 05:55:53,697 | INFO     | mean y: 2517128.8235294116
[2025-07-26 01:56:14] 2025-07-26 05:55:53,697 | INFO     | -- intersect: 65401263446.60567
[2025-07-26 01:56:14] 2025-07-26 05:55:53,697 | INFO     | intersect: 65401263446.60567
[2025-07-26 01:56:14] 2025-07-26 05:55:53,697 | INFO     | chi2: 0.5059513535802252
[2025-07-26 01:56:14] 2025-07-26 05:55:53,698 | INFO     | -- intersect: 65401263446.60567
[2025-07-26 01:56:14] 2025-07-26 05:55:53,698 | INFO     | current memory leak: -37.30 B/s (using 187 data points, chi2=0.51)
[2025-07-26 01:56:14] 2025-07-26 05:55:53,698 | INFO     | could have reported an average CPU frequency of 2669 MHz (11 samples)
[2025-07-26 01:56:14] 2025-07-26 05:55:53,698 | INFO     | ..............................
[2025-07-26 01:56:14] 2025-07-26 05:55:53,699 | INFO     | . Timing measurements:
[2025-07-26 01:56:14] 2025-07-26 05:55:53,699 | INFO     | . get job = 0 s
[2025-07-26 01:56:14] 2025-07-26 05:55:53,699 | INFO     | . initial setup = 3 s
[2025-07-26 01:56:14] 2025-07-26 05:55:53,699 | INFO     | . payload setup = 12 s
[2025-07-26 01:56:14] 2025-07-26 05:55:53,699 | INFO     | . stage-in = 0 s
[2025-07-26 01:56:14] 2025-07-26 05:55:53,699 | INFO     | . payload execution = 12946 s
[2025-07-26 01:56:14] 2025-07-26 05:55:53,699 | INFO     | . stage-out = 2 s
[2025-07-26 01:56:14] 2025-07-26 05:55:53,699 | INFO     | . log creation = 0 s
[2025-07-26 01:56:14] 2025-07-26 05:55:53,699 | INFO     | ..............................
[2025-07-26 01:56:14] 2025-07-26 05:55:53,756 | INFO     | 
[2025-07-26 01:56:14] 2025-07-26 05:55:53,756 | INFO     | job summary report
[2025-07-26 01:56:14] 2025-07-26 05:55:53,756 | INFO     | --------------------------------------------------
[2025-07-26 01:56:14] 2025-07-26 05:55:53,756 | INFO     | PanDA job id: 6741890407
[2025-07-26 01:56:14] 2025-07-26 05:55:53,756 | INFO     | task id: 45697472
[2025-07-26 01:56:14] 2025-07-26 05:55:53,756 | INFO     | errors: (none)
[2025-07-26 01:56:14] 2025-07-26 05:55:53,756 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-26 01:56:14] 2025-07-26 05:55:53,756 | INFO     | pilot state: finished 
[2025-07-26 01:56:14] 2025-07-26 05:55:53,756 | INFO     | transexitcode: 0
[2025-07-26 01:56:14] 2025-07-26 05:55:53,757 | INFO     | exeerrorcode: 0
[2025-07-26 01:56:14] 2025-07-26 05:55:53,757 | INFO     | exeerrordiag: 
[2025-07-26 01:56:14] 2025-07-26 05:55:53,757 | INFO     | exitcode: 0
[2025-07-26 01:56:14] 2025-07-26 05:55:53,757 | INFO     | exitmsg: OK
[2025-07-26 01:56:14] 2025-07-26 05:55:53,757 | INFO     | cpuconsumptiontime: 64298 s
[2025-07-26 01:56:14] 2025-07-26 05:55:53,757 | INFO     | nevents: 400
[2025-07-26 01:56:14] 2025-07-26 05:55:53,757 | INFO     | neventsw: 0
[2025-07-26 01:56:14] 2025-07-26 05:55:53,757 | INFO     | pid: 1689319
[2025-07-26 01:56:14] 2025-07-26 05:55:53,757 | INFO     | pgrp: 1689319
[2025-07-26 01:56:14] 2025-07-26 05:55:53,757 | INFO     | corecount: 12
[2025-07-26 01:56:14] 2025-07-26 05:55:53,757 | INFO     | event service: False
[2025-07-26 01:56:14] 2025-07-26 05:55:53,757 | INFO     | sizes: {0: 2397318, 1: 2397573, 2: 2397601, 10: 2397863, 12: 2397891, 12962: 2428027, 12963: 2428154, 12966: 2437264, 12974: 2437402}
[2025-07-26 01:56:14] 2025-07-26 05:55:53,757 | INFO     | --------------------------------------------------
[2025-07-26 01:56:14] 2025-07-26 05:55:53,757 | INFO     | 
[2025-07-26 01:56:14] 2025-07-26 05:55:53,757 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-07-26 01:56:14] 2025-07-26 05:55:53,773 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-26 01:56:14] 2025-07-26 05:55:53,773 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-26 01:56:14] 2025-07-26 05:55:53,773 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-26 01:56:14] 2025-07-26 05:55:53,773 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-26 01:56:14] 2025-07-26 05:55:53,773 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-26 01:56:14] 2025-07-26 05:55:53,773 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-26 01:56:14] 2025-07-26 05:55:53,773 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-26 01:56:14] 2025-07-26 05:55:53,773 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-26 01:56:14] 2025-07-26 05:55:53,773 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-26 01:56:14] 2025-07-26 05:55:53,773 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-26 01:56:14] 2025-07-26 05:55:53,774 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-26 01:56:14] 2025-07-26 05:55:53,774 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-26 01:56:14] 2025-07-26 05:55:53,774 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-26 01:56:14] 2025-07-26 05:55:53,774 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-26 01:56:14] 2025-07-26 05:55:53,774 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-26 01:56:14] 2025-07-26 05:55:53,774 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-26 01:56:14] 2025-07-26 05:55:53,774 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-26 01:56:14] 2025-07-26 05:55:53,774 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-26 01:56:14] 2025-07-26 05:55:53,774 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-26 01:56:14] 2025-07-26 05:55:53,774 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-26 01:56:14] 2025-07-26 05:55:53,774 | INFO     | job 6741890407 has completed (purged errors)
[2025-07-26 01:56:14] 2025-07-26 05:55:53,774 | INFO     | overall cleanup function is called
[2025-07-26 01:56:14] 2025-07-26 05:55:54,782 | INFO     | --- collectZombieJob: --- 10, [1689319]
[2025-07-26 01:56:14] 2025-07-26 05:55:54,783 | INFO     | zombie collector waiting for pid 1689319
[2025-07-26 01:56:14] 2025-07-26 05:55:54,784 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-26 01:56:14] 2025-07-26 05:55:54,784 | INFO     | collected zombie processes
[2025-07-26 01:56:14] 2025-07-26 05:55:54,784 | INFO     | will attempt to kill all subprocesses of pid=1689319
[2025-07-26 01:56:14] 2025-07-26 05:55:54,911 | INFO     | PID=1681858 has CPU usage=11.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-07-26 01:56:14] 2025-07-26 05:55:54,911 | INFO     | .. there are 19 such processes running
[2025-07-26 01:56:14] 2025-07-26 05:55:55,177 | INFO     | process IDs to be killed: [1689319] (in reverse order)
[2025-07-26 01:56:14] 2025-07-26 05:55:55,269 | WARNING  | found no corresponding commands to process id(s)
[2025-07-26 01:56:14] 2025-07-26 05:55:55,270 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-26 01:56:14] 2025-07-26 05:55:55,280 | INFO     | did not find any defunct processes belonging to 1689319
[2025-07-26 01:56:14] 2025-07-26 05:55:55,291 | INFO     | did not find any defunct processes belonging to 1689319
[2025-07-26 01:56:14] 2025-07-26 05:55:55,291 | INFO     | ready for new job
[2025-07-26 01:56:14] 2025-07-26 05:55:55,291 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-26 01:56:14] 2025-07-26 05:55:55,293 | INFO     | ***************************************
[2025-07-26 01:56:14] 2025-07-26 05:55:55,293 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-26 01:56:14] 2025-07-26 05:55:55,293 | INFO     | ***************************************
[2025-07-26 01:56:14] 2025-07-26 05:55:55,293 | INFO     | 
[2025-07-26 01:56:14] 2025-07-26 05:55:55,310 | INFO     | architecture information:
[2025-07-26 01:56:14] 2025-07-26 05:55:55,310 | INFO     | executing command: cat /etc/os-release
[2025-07-26 01:56:14] 2025-07-26 05:55:55,325 | INFO     | cat /etc/os-release:
[2025-07-26 01:56:14] NAME="CentOS Linux"
[2025-07-26 01:56:14] VERSION="7 (Core)"
[2025-07-26 01:56:14] ID="centos"
[2025-07-26 01:56:14] ID_LIKE="rhel fedora"
[2025-07-26 01:56:14] VERSION_ID="7"
[2025-07-26 01:56:14] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-26 01:56:14] ANSI_COLOR="0;31"
[2025-07-26 01:56:14] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-26 01:56:14] HOME_URL="https://www.centos.org/"
[2025-07-26 01:56:14] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-26 01:56:14] 
[2025-07-26 01:56:14] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-26 01:56:14] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-26 01:56:14] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-26 01:56:14] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-26 01:56:14] 
[2025-07-26 01:56:14] 2025-07-26 05:55:55,326 | INFO     | ***************************************
[2025-07-26 01:56:14] 2025-07-26 05:55:55,828 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-07-26 01:56:14] 2025-07-26 05:55:55,847 | INFO     | sufficient remaining disk space (76007079936 B)
[2025-07-26 01:56:14] 2025-07-26 05:55:55,847 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-26 01:56:14] 2025-07-26 05:55:55,847 | INFO     | current server update state: UPDATING_FINAL
[2025-07-26 01:56:14] 2025-07-26 05:55:55,848 | INFO     | update_server=False
[2025-07-26 01:56:14] 2025-07-26 05:55:55,848 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-26 01:56:14] 2025-07-26 05:55:55,848 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-07-26 01:56:14] 2025-07-26 05:55:55,848 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-26 01:56:14] 2025-07-26 05:55:55,849 | INFO     | found 0 job(s) in 20 queues
[2025-07-26 01:56:14] 2025-07-26 05:55:55,849 | INFO     | aborting loop
[2025-07-26 01:56:14] 2025-07-26 05:55:55,849 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-26 01:56:14] 2025-07-26 05:55:55,850 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-26 01:56:14] 2025-07-26 05:55:56,304 | INFO     | all job control threads have been joined
[2025-07-26 01:56:14] 2025-07-26 05:55:56,465 | INFO     | all data control threads have been joined
[2025-07-26 01:56:14] 2025-07-26 05:55:56,818 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-26 01:56:14] 2025-07-26 05:55:56,854 | INFO     | [job] retrieve thread has finished
[2025-07-26 01:56:14] 2025-07-26 05:55:56,854 | INFO     | [job] job monitor thread has finished
[2025-07-26 01:56:14] 2025-07-26 05:55:56,901 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-26 01:56:14] 2025-07-26 05:55:57,164 | INFO     | all payload control threads have been joined
[2025-07-26 01:56:14] 2025-07-26 05:55:57,309 | INFO     | [job] control thread has finished
[2025-07-26 01:56:14] 2025-07-26 05:55:57,364 | INFO     | [job] create_data_payload thread has finished
[2025-07-26 01:56:14] 2025-07-26 05:55:57,415 | INFO     | [job] validate thread has finished
[2025-07-26 01:56:14] 2025-07-26 05:55:57,432 | INFO     | [payload] failed_post thread has finished
[2025-07-26 01:56:14] 2025-07-26 05:55:57,470 | INFO     | [data] control thread has finished
[2025-07-26 01:56:14] 2025-07-26 05:55:57,548 | INFO     | [data] copytool_in thread has finished
[2025-07-26 01:56:14] 2025-07-26 05:55:58,169 | INFO     | [payload] control thread has finished
[2025-07-26 01:56:14] 2025-07-26 05:55:58,223 | INFO     | [payload] validate_pre thread has finished
[2025-07-26 01:56:14] 2025-07-26 05:55:58,336 | INFO     | [payload] validate_post thread has finished
[2025-07-26 01:56:14] 2025-07-26 05:55:58,353 | INFO     | [payload] execute_payloads thread has finished
[2025-07-26 01:56:14] 2025-07-26 05:55:58,767 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-26 01:56:14] 2025-07-26 05:55:58,823 | INFO     | [data] copytool_out thread has finished
[2025-07-26 01:56:14] 2025-07-26 05:55:59,772 | INFO     | [job] queue monitor thread has finished
[2025-07-26 01:56:14] 2025-07-26 05:56:00,906 | INFO     | [data] queue_monitor thread has finished
[2025-07-26 01:56:14] 2025-07-26 05:56:06,331 | INFO     | job.realtimelogging is not enabled
[2025-07-26 01:56:14] 2025-07-26 05:56:07,337 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-26 01:56:14] 2025-07-26 05:56:09,125 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139749673973568)>', '<ExcThread(monitor, started 139749033502464)>']
[2025-07-26 01:56:14] 2025-07-26 05:56:09,921 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-26 01:56:14] 2025-07-26 05:56:09,921 | INFO     | [monitor] control thread has ended
[2025-07-26 01:56:14] 2025-07-26 05:56:14,150 | INFO     | all workflow threads have been joined
[2025-07-26 01:56:14] 2025-07-26 05:56:14,150 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-26 01:56:14] 2025-07-26 05:56:14,151 | INFO     | traces error code: 0
[2025-07-26 01:56:14] 2025-07-26 05:56:14,151 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-26 01:56:14] 2025-07-26 05:56:14,323 [wrapper] ==== pilot stdout END ====
[2025-07-26 01:56:14] 2025-07-26 05:56:14,326 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-26 01:56:14] 2025-07-26 05:56:14,328 [wrapper] pilotpid: 1681858
[2025-07-26 01:56:14] 2025-07-26 05:56:14,331 [wrapper] Pilot exit status: 0
[2025-07-26 01:56:14] 2025-07-26 05:56:14,343 [wrapper] pandaids: 6741890407
[2025-07-26 01:56:14] 2025-07-26 05:56:14,404 [wrapper] cleanup supervisor_pilot 2260225 1681859
[2025-07-26 01:56:14] 2025-07-26 05:56:14,407 [wrapper] Test setup, not cleaning
[2025-07-26 01:56:14] 2025-07-26 05:56:14,411 [wrapper] apfmon messages muted
[2025-07-26 01:56:14] 2025-07-26 05:56:14,413 [wrapper] ==== wrapper stdout END ====
[2025-07-26 01:56:14] 2025-07-26 05:56:14,416 [wrapper] ==== wrapper stderr END ====
[2025-07-26 01:56:14]  *** Error codes and diagnostics ***
[2025-07-26 01:56:14]     "exeErrorCode": 0,
[2025-07-26 01:56:14]     "exeErrorDiag": "",
[2025-07-26 01:56:14]     "pilotErrorCode": 0,
[2025-07-26 01:56:14]     "pilotErrorDiag": "",
[2025-07-26 01:56:14]  *** Listing of results directory ***
[2025-07-26 01:56:14] total 606496
[2025-07-26 01:56:14] -rw-r--r--. 1 boincer umatlas    530466 Jul 23 04:22 pilot3.tar.gz
[2025-07-26 01:56:14] -rwx------. 1 boincer umatlas     36292 Jul 23 04:29 runpilot2-wrapper.sh
[2025-07-26 01:56:14] -rw-r--r--. 1 boincer umatlas      5112 Jul 23 04:29 queuedata.json
[2025-07-26 01:56:14] -rw-r--r--. 1 boincer umatlas       100 Jul 25 22:18 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-26 01:56:14] -rwxr-xr-x. 1 boincer umatlas      7986 Jul 25 22:18 run_atlas
[2025-07-26 01:56:14] -rw-r--r--. 1 boincer umatlas       105 Jul 25 22:18 job.xml
[2025-07-26 01:56:14] -rw-r--r--. 2 boincer umatlas 333685629 Jul 25 22:18 EVNT.45697470._000205.pool.root.1
[2025-07-26 01:56:14] -rw-r--r--. 2 boincer umatlas     15095 Jul 25 22:18 start_atlas.sh
[2025-07-26 01:56:14] drwxrwx--x. 2 boincer umatlas      4096 Jul 25 22:18 shared
[2025-07-26 01:56:14] -rw-r--r--. 2 boincer umatlas    542899 Jul 25 22:18 input.tar.gz
[2025-07-26 01:56:14] -rw-r--r--. 1 boincer umatlas         0 Jul 25 22:18 boinc_lockfile
[2025-07-26 01:56:14] -rw-r--r--. 1 boincer umatlas      2612 Jul 25 22:18 pandaJob.out
[2025-07-26 01:56:14] -rw-------. 1 boincer umatlas    979977 Jul 25 22:19 agis_schedconf.cvmfs.json
[2025-07-26 01:56:14] drwx------. 4 boincer umatlas      4096 Jul 25 22:19 pilot3
[2025-07-26 01:56:14] -rw-r--r--. 1 boincer umatlas      6842 Jul 26 01:46 init_data.xml
[2025-07-26 01:56:14] -rw-------. 1 boincer umatlas 280408742 Jul 26 01:54 HITS.45697472._004545.pool.root.1
[2025-07-26 01:56:14] -rw-------. 1 boincer umatlas        95 Jul 26 01:54 pilot_heartbeat.json
[2025-07-26 01:56:14] -rw-r--r--. 1 boincer umatlas       531 Jul 26 01:55 boinc_task_state.xml
[2025-07-26 01:56:14] -rw-------. 1 boincer umatlas      1040 Jul 26 01:55 memory_monitor_summary.json
[2025-07-26 01:56:14] -rw-------. 1 boincer umatlas   1593052 Jul 26 01:55 agis_ddmendpoints.agis.ALL.json
[2025-07-26 01:56:14] -rw-------. 1 boincer umatlas    451184 Jul 26 01:55 log.45697472._004545.job.log.tgz.1
[2025-07-26 01:56:14] -rw-------. 1 boincer umatlas      7822 Jul 26 01:55 heartbeat.json
[2025-07-26 01:56:14] -rw-r--r--. 1 boincer umatlas        28 Jul 26 01:56 wrapper_checkpoint.txt
[2025-07-26 01:56:14] -rw-r--r--. 1 boincer umatlas      8192 Jul 26 01:56 boinc_mmap_file
[2025-07-26 01:56:14] -rw-------. 1 boincer umatlas      4552 Jul 26 01:56 pilotlog.txt
[2025-07-26 01:56:14] -rw-------. 1 boincer umatlas   1088436 Jul 26 01:56 log.45697472._004545.job.log.1
[2025-07-26 01:56:14] -rw-------. 1 boincer umatlas       357 Jul 26 01:56 output.list
[2025-07-26 01:56:14] -rw-r--r--. 1 boincer umatlas       620 Jul 26 01:56 runtime_log
[2025-07-26 01:56:14] -rw-------. 1 boincer umatlas   1556480 Jul 26 01:56 result.tar.gz
[2025-07-26 01:56:14] -rw-------. 1 boincer umatlas       658 Jul 26 01:56 ynVLDmv1jy7n9Rq4apOajLDm4fhM0noT9bVof3QYDmGzvKDmls5kYn.diag
[2025-07-26 01:56:14] -rw-r--r--. 1 boincer umatlas      8668 Jul 26 01:56 runtime_log.err
[2025-07-26 01:56:14] -rw-r--r--. 1 boincer umatlas     21252 Jul 26 01:56 stderr.txt
[2025-07-26 01:56:14] HITS file was successfully produced:
[2025-07-26 01:56:14] -rw-------. 1 boincer umatlas 280408742 Jul 26 01:54 shared/HITS.pool.root.1
[2025-07-26 01:56:14]  *** Contents of shared directory: ***
[2025-07-26 01:56:14] total 601780
[2025-07-26 01:56:14] -rw-r--r--. 2 boincer umatlas 333685629 Jul 25 22:18 ATLAS.root_0
[2025-07-26 01:56:14] -rw-r--r--. 2 boincer umatlas     15095 Jul 25 22:18 start_atlas.sh
[2025-07-26 01:56:14] -rw-r--r--. 2 boincer umatlas    542899 Jul 25 22:18 input.tar.gz
[2025-07-26 01:56:14] -rw-------. 1 boincer umatlas 280408742 Jul 26 01:54 HITS.pool.root.1
[2025-07-26 01:56:14] -rw-------. 1 boincer umatlas   1556480 Jul 26 01:56 result.tar.gz
01:56:16 (1678206): run_atlas exited; CPU time 64592.634376
01:56:16 (1678206): called boinc_finish(0)

</stderr_txt>
]]>

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