Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
21:04:40 (1835120): wrapper (7.7.26015): starting
21:04:40 (1835120): wrapper: running run_atlas (--nthreads 10)
[2025-07-25 21:04:40] Arguments: --nthreads 10
[2025-07-25 21:04:40] Threads: 10
[2025-07-25 21:04:40] Checking for CVMFS
[2025-07-25 21:04:40] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-25 21:04:40] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-25 21:04:40] Running cvmfs_config stat atlas.cern.ch
[2025-07-25 21:04:40] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-25 21:04:40] 2.13.1.0 148585 4569 145080 148758 0 397 18973739 39288833 5102 16776704 0 5508083 99.607 6673856 42631 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-07-25 21:04:40] CVMFS is ok
[2025-07-25 21:04:40] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-25 21:04:40] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-25 21:04:40] Further information can be found at the LHC@home message board.
[2025-07-25 21:04:40] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-25 21:04:40] Checking for apptainer binary...
[2025-07-25 21:04:40] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-25 21:04:40] Running /usr/bin/apptainer --version
[2025-07-25 21:04:40] apptainer version 1.4.1-1.el9
[2025-07-25 21:04:40] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-25 21:04:40] c-210-12.aglt2.org
[2025-07-25 21:04:40] apptainer works
[2025-07-25 21:04:40] Set ATHENA_PROC_NUMBER=10
[2025-07-25 21:04:40] Set ATHENA_CORE_NUMBER=10
[2025-07-25 21:04:40] Starting ATLAS job with PandaID=6745058054
[2025-07-25 21:04:40] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-25 22:46:22]  *** The last 200 lines of the pilot log: ***
[2025-07-25 22:46:22]  scope=mc23_13p6TeV
[2025-07-25 22:46:22]  status=None
[2025-07-25 22:46:22]  status_code=0
[2025-07-25 22:46:22]  storage_token=
[2025-07-25 22:46:22]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6745058054/log.45743349._023560.job.log.tgz.1
[2025-07-25 22:46:22]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/0f/2e/log.45743349._023560.job.log.tgz.1
[2025-07-25 22:46:22]  workdir=None
[2025-07-25 22:46:22] ]
[2025-07-25 22:46:22] 2025-07-26 02:45:41,185 | INFO     | transferring file log.45743349._023560.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6745058054/log.45743349._023560.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-07-25 22:46:22] 2025-07-26 02:45:41,185 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6745058054/log.45743349._023560.job.log.tgz.1 /tmp/boinchome/slots/0/log.45743349._023560.job
[2025-07-25 22:46:22] 2025-07-26 02:45:41,208 | INFO     | adding to output.list: log.45743349._023560.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/0f/2e/log.45743349._023560.job.log.tg
[2025-07-25 22:46:22] 2025-07-26 02:45:41,209 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-25 22:46:22] 2025-07-26 02:45:41,209 | INFO     | summary of transferred files:
[2025-07-25 22:46:22] 2025-07-26 02:45:41,209 | INFO     |  -- lfn=log.45743349._023560.job.log.tgz.1, status_code=0, status=transferred
[2025-07-25 22:46:22] 2025-07-26 02:45:41,210 | INFO     | stage-out finished correctly
[2025-07-25 22:46:22] 2025-07-26 02:45:42,286 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-25 22:46:22] 2025-07-26 02:45:43,364 | INFO     | monitor loop #450: job 0:6745058054 is in state 'finished'
[2025-07-25 22:46:22] 2025-07-26 02:45:43,364 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-25 22:46:22] 2025-07-26 02:45:43,707 | INFO     | job 6745058054 has state=finished
[2025-07-25 22:46:22] 2025-07-26 02:45:43,708 | INFO     | preparing for final server update for job 6745058054 in state='finished'
[2025-07-25 22:46:22] 2025-07-26 02:45:43,708 | INFO     | this job has now completed (state=finished)
[2025-07-25 22:46:22] 2025-07-26 02:45:43,708 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-25 22:46:22] 2025-07-26 02:45:43,708 | INFO     | log transfer has been attempted: DONE
[2025-07-25 22:46:22] 2025-07-26 02:45:43,709 | INFO     | job 6745058054 has finished - writing final server update
[2025-07-25 22:46:22] 2025-07-26 02:45:43,709 | INFO     | total number of processed events: 400 (read)
[2025-07-25 22:46:22] 2025-07-26 02:45:43,710 | INFO     | executing command: lscpu
[2025-07-25 22:46:22] 2025-07-26 02:45:43,756 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-25 22:46:22] 2025-07-26 02:45:45,868 | INFO     | monitor loop #451: job 0:6745058054 is in state 'finished'
[2025-07-25 22:46:22] 2025-07-26 02:45:45,868 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-25 22:46:22] 2025-07-26 02:45:48,371 | INFO     | monitor loop #452: job 0:6745058054 is in state 'finished'
[2025-07-25 22:46:22] 2025-07-26 02:45:48,371 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-25 22:46:22] 2025-07-26 02:45:48,507 | INFO     | CPU arch script returned: x86-64-v3
[2025-07-25 22:46:22] 2025-07-26 02:45:48,512 | INFO     | found 20 cores (10 cores per socket, 2 sockets) HT, CPU MHz: 2600.1492000000003
[2025-07-25 22:46:22] 2025-07-26 02:45:48,518 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6745058054/memory_monitor_summary.json (trf name=prmon)
[2025-07-25 22:46:22] 2025-07-26 02:45:48,518 | INFO     | extracted standard info from prmon json
[2025-07-25 22:46:22] 2025-07-26 02:45:48,519 | INFO     | extracted standard memory fields from prmon json
[2025-07-25 22:46:22] 2025-07-26 02:45:48,519 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-25 22:46:22] 2025-07-26 02:45:48,519 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-25 22:46:22] 2025-07-26 02:45:48,519 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-25 22:46:22] 2025-07-26 02:45:48,521 | INFO     | fitting pss+swap vs Time
[2025-07-25 22:46:22] 2025-07-26 02:45:48,521 | INFO     | sum of square deviations: 241429643.0
[2025-07-25 22:46:22] 2025-07-26 02:45:48,522 | INFO     | sum of deviations: -114982987.0
[2025-07-25 22:46:22] 2025-07-26 02:45:48,522 | INFO     | mean x: 1753495001.5
[2025-07-25 22:46:22] 2025-07-26 02:45:48,522 | INFO     | mean y: 2656630.0
[2025-07-25 22:46:22] 2025-07-26 02:45:48,522 | INFO     | -- intersect: 837774018.4726304
[2025-07-25 22:46:22] 2025-07-26 02:45:48,522 | INFO     | intersect: 837774018.4726304
[2025-07-25 22:46:22] 2025-07-26 02:45:48,522 | INFO     | chi2: 0.04705556582558909
[2025-07-25 22:46:22] 2025-07-26 02:45:48,522 | INFO     | -- intersect: 837774018.4726304
[2025-07-25 22:46:22] 2025-07-26 02:45:48,523 | INFO     | current memory leak: -0.48 B/s (using 92 data points, chi2=0.05)
[2025-07-25 22:46:22] 2025-07-26 02:45:48,523 | INFO     | could have reported an average CPU frequency of 2600 MHz (7 samples)
[2025-07-25 22:46:22] 2025-07-26 02:45:48,523 | INFO     | ..............................
[2025-07-25 22:46:22] 2025-07-26 02:45:48,523 | INFO     | . Timing measurements:
[2025-07-25 22:46:22] 2025-07-26 02:45:48,523 | INFO     | . get job = 0 s
[2025-07-25 22:46:22] 2025-07-26 02:45:48,523 | INFO     | . initial setup = 2 s
[2025-07-25 22:46:22] 2025-07-26 02:45:48,524 | INFO     | . payload setup = 7 s
[2025-07-25 22:46:22] 2025-07-26 02:45:48,524 | INFO     | . stage-in = 0 s
[2025-07-25 22:46:22] 2025-07-26 02:45:48,524 | INFO     | . payload execution = 6021 s
[2025-07-25 22:46:22] 2025-07-26 02:45:48,524 | INFO     | . stage-out = 0 s
[2025-07-25 22:46:22] 2025-07-26 02:45:48,524 | INFO     | . log creation = 0 s
[2025-07-25 22:46:22] 2025-07-26 02:45:48,524 | INFO     | ..............................
[2025-07-25 22:46:22] 2025-07-26 02:45:48,627 | INFO     | 
[2025-07-25 22:46:22] 2025-07-26 02:45:48,627 | INFO     | job summary report
[2025-07-25 22:46:22] 2025-07-26 02:45:48,627 | INFO     | --------------------------------------------------
[2025-07-25 22:46:22] 2025-07-26 02:45:48,627 | INFO     | PanDA job id: 6745058054
[2025-07-25 22:46:22] 2025-07-26 02:45:48,627 | INFO     | task id: 45743349
[2025-07-25 22:46:22] 2025-07-26 02:45:48,627 | INFO     | errors: (none)
[2025-07-25 22:46:22] 2025-07-26 02:45:48,628 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-25 22:46:22] 2025-07-26 02:45:48,628 | INFO     | pilot state: finished 
[2025-07-25 22:46:22] 2025-07-26 02:45:48,628 | INFO     | transexitcode: 0
[2025-07-25 22:46:22] 2025-07-26 02:45:48,628 | INFO     | exeerrorcode: 0
[2025-07-25 22:46:22] 2025-07-26 02:45:48,628 | INFO     | exeerrordiag: 
[2025-07-25 22:46:22] 2025-07-26 02:45:48,628 | INFO     | exitcode: 0
[2025-07-25 22:46:22] 2025-07-26 02:45:48,628 | INFO     | exitmsg: OK
[2025-07-25 22:46:22] 2025-07-26 02:45:48,628 | INFO     | cpuconsumptiontime: 55864 s
[2025-07-25 22:46:22] 2025-07-26 02:45:48,629 | INFO     | nevents: 400
[2025-07-25 22:46:22] 2025-07-26 02:45:48,629 | INFO     | neventsw: 0
[2025-07-25 22:46:22] 2025-07-26 02:45:48,629 | INFO     | pid: 1846744
[2025-07-25 22:46:22] 2025-07-26 02:45:48,629 | INFO     | pgrp: 1846744
[2025-07-25 22:46:22] 2025-07-26 02:45:48,629 | INFO     | corecount: 10
[2025-07-25 22:46:22] 2025-07-26 02:45:48,629 | INFO     | event service: False
[2025-07-25 22:46:22] 2025-07-26 02:45:48,629 | INFO     | sizes: {0: 2397359, 1: 2397501, 5: 2397763, 11: 2397819, 6032: 2424513, 6033: 2433511, 6034: 2433695, 6040: 2433889}
[2025-07-25 22:46:22] 2025-07-26 02:45:48,629 | INFO     | --------------------------------------------------
[2025-07-25 22:46:22] 2025-07-26 02:45:48,629 | INFO     | 
[2025-07-25 22:46:22] 2025-07-26 02:45:48,630 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-07-25 22:46:22] 2025-07-26 02:45:48,651 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-25 22:46:22] 2025-07-26 02:45:48,651 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-25 22:46:22] 2025-07-26 02:45:48,651 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-25 22:46:22] 2025-07-26 02:45:48,651 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-25 22:46:22] 2025-07-26 02:45:48,651 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-25 22:46:22] 2025-07-26 02:45:48,652 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-25 22:46:22] 2025-07-26 02:45:48,652 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-25 22:46:22] 2025-07-26 02:45:48,652 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-25 22:46:22] 2025-07-26 02:45:48,652 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-25 22:46:22] 2025-07-26 02:45:48,652 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-25 22:46:22] 2025-07-26 02:45:48,652 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-25 22:46:22] 2025-07-26 02:45:48,652 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-25 22:46:22] 2025-07-26 02:45:48,652 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-25 22:46:22] 2025-07-26 02:45:48,652 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-25 22:46:22] 2025-07-26 02:45:48,652 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-25 22:46:22] 2025-07-26 02:45:48,652 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-25 22:46:22] 2025-07-26 02:45:48,653 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-25 22:46:22] 2025-07-26 02:45:48,653 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-25 22:46:22] 2025-07-26 02:45:48,653 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-25 22:46:22] 2025-07-26 02:45:48,653 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-25 22:46:22] 2025-07-26 02:45:48,653 | INFO     | job 6745058054 has completed (purged errors)
[2025-07-25 22:46:22] 2025-07-26 02:45:48,653 | INFO     | overall cleanup function is called
[2025-07-25 22:46:22] 2025-07-26 02:45:49,399 | INFO     | PID=1838707 has CPU usage=9.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-25 22:46:22] 2025-07-26 02:45:49,400 | INFO     | .. there are 6 such processes running
[2025-07-25 22:46:22] 2025-07-26 02:45:49,661 | INFO     | --- collectZombieJob: --- 10, [1846744]
[2025-07-25 22:46:22] 2025-07-26 02:45:49,661 | INFO     | zombie collector waiting for pid 1846744
[2025-07-25 22:46:22] 2025-07-26 02:45:49,661 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-25 22:46:22] 2025-07-26 02:45:49,661 | INFO     | collected zombie processes
[2025-07-25 22:46:22] 2025-07-26 02:45:49,661 | INFO     | will attempt to kill all subprocesses of pid=1846744
[2025-07-25 22:46:22] 2025-07-26 02:45:49,865 | INFO     | process IDs to be killed: [1846744] (in reverse order)
[2025-07-25 22:46:22] 2025-07-26 02:45:49,930 | WARNING  | found no corresponding commands to process id(s)
[2025-07-25 22:46:22] 2025-07-26 02:45:49,930 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-25 22:46:22] 2025-07-26 02:45:49,937 | INFO     | did not find any defunct processes belonging to 1846744
[2025-07-25 22:46:22] 2025-07-26 02:45:49,945 | INFO     | did not find any defunct processes belonging to 1846744
[2025-07-25 22:46:22] 2025-07-26 02:45:49,945 | INFO     | ready for new job
[2025-07-25 22:46:22] 2025-07-26 02:45:49,945 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-25 22:46:22] 2025-07-26 02:45:49,947 | INFO     | ***************************************
[2025-07-25 22:46:22] 2025-07-26 02:45:49,948 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-25 22:46:22] 2025-07-26 02:45:49,948 | INFO     | ***************************************
[2025-07-25 22:46:22] 2025-07-26 02:45:49,948 | INFO     | 
[2025-07-25 22:46:22] 2025-07-26 02:45:49,950 | INFO     | architecture information:
[2025-07-25 22:46:22] 2025-07-26 02:45:49,950 | INFO     | executing command: cat /etc/os-release
[2025-07-25 22:46:22] 2025-07-26 02:45:49,965 | INFO     | cat /etc/os-release:
[2025-07-25 22:46:22] NAME="CentOS Linux"
[2025-07-25 22:46:22] VERSION="7 (Core)"
[2025-07-25 22:46:22] ID="centos"
[2025-07-25 22:46:22] ID_LIKE="rhel fedora"
[2025-07-25 22:46:22] VERSION_ID="7"
[2025-07-25 22:46:22] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-25 22:46:22] ANSI_COLOR="0;31"
[2025-07-25 22:46:22] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-25 22:46:22] HOME_URL="https://www.centos.org/"
[2025-07-25 22:46:22] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-25 22:46:22] 
[2025-07-25 22:46:22] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-25 22:46:22] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-25 22:46:22] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-25 22:46:22] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-25 22:46:22] 
[2025-07-25 22:46:22] 2025-07-26 02:45:49,966 | INFO     | ***************************************
[2025-07-25 22:46:22] 2025-07-26 02:45:50,468 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-07-25 22:46:22] 2025-07-26 02:45:50,485 | INFO     | sufficient remaining disk space (54004809728 B)
[2025-07-25 22:46:22] 2025-07-26 02:45:50,486 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-25 22:46:22] 2025-07-26 02:45:50,486 | INFO     | current server update state: UPDATING_FINAL
[2025-07-25 22:46:22] 2025-07-26 02:45:50,486 | INFO     | update_server=False
[2025-07-25 22:46:22] 2025-07-26 02:45:50,486 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-25 22:46:22] 2025-07-26 02:45:50,486 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-25 22:46:22] 2025-07-26 02:45:50,874 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-07-25 22:46:22] 2025-07-26 02:45:50,874 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-07-25 22:46:22] 2025-07-26 02:45:50,874 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-25 22:46:22] 2025-07-26 02:45:50,874 | INFO     | will abort loop
[2025-07-25 22:46:22] 2025-07-26 02:45:50,878 | INFO     | all data control threads have been joined
[2025-07-25 22:46:22] 2025-07-26 02:45:51,293 | INFO     | all payload control threads have been joined
[2025-07-25 22:46:22] 2025-07-26 02:45:51,491 | INFO     | [job] retrieve thread has finished
[2025-07-25 22:46:22] 2025-07-26 02:45:51,492 | INFO     | [job] queue monitor thread has finished
[2025-07-25 22:46:22] 2025-07-26 02:45:51,648 | INFO     | [payload] execute_payloads thread has finished
[2025-07-25 22:46:22] 2025-07-26 02:45:51,694 | INFO     | [data] copytool_in thread has finished
[2025-07-25 22:46:22] 2025-07-26 02:45:51,802 | INFO     | [payload] validate_pre thread has finished
[2025-07-25 22:46:22] 2025-07-26 02:45:51,816 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-25 22:46:22] 2025-07-26 02:45:51,879 | INFO     | [job] job monitor thread has finished
[2025-07-25 22:46:22] 2025-07-26 02:45:51,883 | INFO     | [data] control thread has finished
[2025-07-25 22:46:22] 2025-07-26 02:45:52,183 | INFO     | all job control threads have been joined
[2025-07-25 22:46:22] 2025-07-26 02:45:52,298 | INFO     | [payload] control thread has finished
[2025-07-25 22:46:22] 2025-07-26 02:45:52,451 | INFO     | [payload] failed_post thread has finished
[2025-07-25 22:46:22] 2025-07-26 02:45:52,469 | INFO     | [payload] validate_post thread has finished
[2025-07-25 22:46:22] 2025-07-26 02:45:52,584 | INFO     | [job] create_data_payload thread has finished
[2025-07-25 22:46:22] 2025-07-26 02:45:52,846 | INFO     | [job] validate thread has finished
[2025-07-25 22:46:22] 2025-07-26 02:45:52,886 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-25 22:46:22] 2025-07-26 02:45:53,188 | INFO     | [job] control thread has finished
[2025-07-25 22:46:22] 2025-07-26 02:45:53,821 | INFO     | [data] copytool_out thread has finished
[2025-07-25 22:46:22] 2025-07-26 02:45:56,891 | INFO     | [data] queue_monitor thread has finished
[2025-07-25 22:46:22] 2025-07-26 02:46:01,488 | INFO     | job.realtimelogging is not enabled
[2025-07-25 22:46:22] 2025-07-26 02:46:02,493 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-25 22:46:22] 2025-07-26 02:46:02,735 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140159447222080)>', '<ExcThread(monitor, started 140158741509888)>']
[2025-07-25 22:46:22] 2025-07-26 02:46:07,760 | INFO     | all workflow threads have been joined
[2025-07-25 22:46:22] 2025-07-26 02:46:07,760 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-25 22:46:22] 2025-07-26 02:46:07,760 | INFO     | traces error code: 0
[2025-07-25 22:46:22] 2025-07-26 02:46:07,761 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-25 22:46:22] 2025-07-26 02:46:21,752 | INFO     | PID=1838707 has CPU usage=1.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-25 22:46:22] 2025-07-26 02:46:21,753 | INFO     | .. there are 6 such processes running
[2025-07-25 22:46:22] 2025-07-26 02:46:21,753 | INFO     | found 0 job(s) in 20 queues
[2025-07-25 22:46:22] 2025-07-26 02:46:21,753 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-25 22:46:22] 2025-07-26 02:46:21,753 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-25 22:46:22] 2025-07-26 02:46:21,753 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-25 22:46:22] 2025-07-26 02:46:21,753 | CRITICAL | thread 'MainThread' is not alive
[2025-07-25 22:46:22] 2025-07-26 02:46:21,754 | INFO     | [monitor] control thread has ended
[2025-07-25 22:46:22] 2025-07-26 02:46:21,908 [wrapper] ==== pilot stdout END ====
[2025-07-25 22:46:22] 2025-07-26 02:46:21,912 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-25 22:46:22] 2025-07-26 02:46:21,916 [wrapper] pilotpid: 1838707
[2025-07-25 22:46:22] 2025-07-26 02:46:21,920 [wrapper] Pilot exit status: 0
[2025-07-25 22:46:22] 2025-07-26 02:46:21,936 [wrapper] pandaids: 6745058054
[2025-07-25 22:46:22] 2025-07-26 02:46:21,978 [wrapper] cleanup supervisor_pilot 1928380 1838708
[2025-07-25 22:46:22] 2025-07-26 02:46:21,981 [wrapper] Test setup, not cleaning
[2025-07-25 22:46:22] 2025-07-26 02:46:21,984 [wrapper] apfmon messages muted
[2025-07-25 22:46:22] 2025-07-26 02:46:21,988 [wrapper] ==== wrapper stdout END ====
[2025-07-25 22:46:22] 2025-07-26 02:46:21,991 [wrapper] ==== wrapper stderr END ====
[2025-07-25 22:46:22]  *** Error codes and diagnostics ***
[2025-07-25 22:46:22]     "exeErrorCode": 0,
[2025-07-25 22:46:22]     "exeErrorDiag": "",
[2025-07-25 22:46:22]     "pilotErrorCode": 0,
[2025-07-25 22:46:22]     "pilotErrorDiag": "",
[2025-07-25 22:46:22]  *** Listing of results directory ***
[2025-07-25 22:46:22] total 346876
[2025-07-25 22:46:22] -rw-r--r--. 1 boincer umatlas    530466 Jul 25 11:55 pilot3.tar.gz
[2025-07-25 22:46:22] -rwx------. 1 boincer umatlas     36292 Jul 25 12:13 runpilot2-wrapper.sh
[2025-07-25 22:46:22] -rw-r--r--. 1 boincer umatlas      5112 Jul 25 12:13 queuedata.json
[2025-07-25 22:46:22] -rw-r--r--. 1 boincer umatlas       100 Jul 25 21:04 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-25 22:46:22] -rwxr-xr-x. 1 boincer umatlas      7986 Jul 25 21:04 run_atlas
[2025-07-25 22:46:22] -rw-r--r--. 1 boincer umatlas       105 Jul 25 21:04 job.xml
[2025-07-25 22:46:22] -rw-r--r--. 2 boincer umatlas 143929241 Jul 25 21:04 EVNT.45743347._001331.pool.root.1
[2025-07-25 22:46:22] -rw-r--r--. 2 boincer umatlas     15095 Jul 25 21:04 start_atlas.sh
[2025-07-25 22:46:22] drwxrwx--x. 2 boincer umatlas      4096 Jul 25 21:04 shared
[2025-07-25 22:46:22] -rw-r--r--. 2 boincer umatlas    542888 Jul 25 21:04 input.tar.gz
[2025-07-25 22:46:22] -rw-r--r--. 1 boincer umatlas         0 Jul 25 21:04 boinc_lockfile
[2025-07-25 22:46:22] -rw-r--r--. 1 boincer umatlas      2562 Jul 25 21:04 pandaJob.out
[2025-07-25 22:46:22] -rw-------. 1 boincer umatlas    979993 Jul 25 21:04 agis_schedconf.cvmfs.json
[2025-07-25 22:46:22] -rw-------. 1 boincer umatlas   1593052 Jul 25 21:04 agis_ddmendpoints.agis.ALL.json
[2025-07-25 22:46:22] drwx------. 4 boincer umatlas      4096 Jul 25 21:04 pilot3
[2025-07-25 22:46:22] -rw-r--r--. 1 boincer umatlas      6656 Jul 25 22:39 init_data.xml
[2025-07-25 22:46:22] -rw-------. 1 boincer umatlas 205525204 Jul 25 22:45 HITS.45743349._023560.pool.root.1
[2025-07-25 22:46:22] -rw-r--r--. 1 boincer umatlas       529 Jul 25 22:45 boinc_task_state.xml
[2025-07-25 22:46:22] -rw-------. 1 boincer umatlas      1030 Jul 25 22:45 memory_monitor_summary.json
[2025-07-25 22:46:22] -rw-------. 1 boincer umatlas    348286 Jul 25 22:45 log.45743349._023560.job.log.tgz.1
[2025-07-25 22:46:22] -rw-------. 1 boincer umatlas        95 Jul 25 22:45 pilot_heartbeat.json
[2025-07-25 22:46:22] -rw-------. 1 boincer umatlas      7820 Jul 25 22:45 heartbeat.json
[2025-07-25 22:46:22] -rw-r--r--. 1 boincer umatlas        27 Jul 25 22:46 wrapper_checkpoint.txt
[2025-07-25 22:46:22] -rw-r--r--. 1 boincer umatlas      8192 Jul 25 22:46 boinc_mmap_file
[2025-07-25 22:46:22] -rw-------. 1 boincer umatlas       892 Jul 25 22:46 pilotlog.txt
[2025-07-25 22:46:22] -rw-------. 1 boincer umatlas    587134 Jul 25 22:46 log.45743349._023560.job.log.1
[2025-07-25 22:46:22] -rw-------. 1 boincer umatlas       357 Jul 25 22:46 output.list
[2025-07-25 22:46:22] -rw-r--r--. 1 boincer umatlas       620 Jul 25 22:46 runtime_log
[2025-07-25 22:46:22] -rw-------. 1 boincer umatlas    952320 Jul 25 22:46 result.tar.gz
[2025-07-25 22:46:22] -rw-------. 1 boincer umatlas       653 Jul 25 22:46 sDPNDm9Daz7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmWvPLDmDqxUGm.diag
[2025-07-25 22:46:22] -rw-r--r--. 1 boincer umatlas      8662 Jul 25 22:46 runtime_log.err
[2025-07-25 22:46:22] -rw-r--r--. 1 boincer umatlas     21977 Jul 25 22:46 stderr.txt
[2025-07-25 22:46:22] HITS file was successfully produced:
[2025-07-25 22:46:22] -rw-------. 1 boincer umatlas 205525204 Jul 25 22:45 shared/HITS.pool.root.1
[2025-07-25 22:46:22]  *** Contents of shared directory: ***
[2025-07-25 22:46:22] total 342752
[2025-07-25 22:46:22] -rw-r--r--. 2 boincer umatlas 143929241 Jul 25 21:04 ATLAS.root_0
[2025-07-25 22:46:22] -rw-r--r--. 2 boincer umatlas     15095 Jul 25 21:04 start_atlas.sh
[2025-07-25 22:46:22] -rw-r--r--. 2 boincer umatlas    542888 Jul 25 21:04 input.tar.gz
[2025-07-25 22:46:22] -rw-------. 1 boincer umatlas 205525204 Jul 25 22:45 HITS.pool.root.1
[2025-07-25 22:46:22] -rw-------. 1 boincer umatlas    952320 Jul 25 22:46 result.tar.gz
22:46:23 (1835120): run_atlas exited; CPU time 55915.497641
22:46:23 (1835120): called boinc_finish(0)

</stderr_txt>
]]>

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