Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
20:27:29 (15060): wrapper (7.7.26015): starting
20:27:29 (15060): wrapper: running run_atlas (--nthreads 12)
[2025-07-25 20:27:29] Arguments: --nthreads 12
[2025-07-25 20:27:29] Threads: 12
[2025-07-25 20:27:29] Checking for CVMFS
[2025-07-25 20:27:29] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-25 20:27:29] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-25 20:27:29] Running cvmfs_config stat atlas.cern.ch
[2025-07-25 20:27:29] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-25 20:27:29] 2.11.2.0 2924 109795 97456 148758 1 59 14634034 20275200 1 130560 0 37875250 99.971 10190382 11210 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-07-25 20:27:29] CVMFS is ok
[2025-07-25 20:27:29] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-25 20:27:29] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-25 20:27:29] Further information can be found at the LHC@home message board.
[2025-07-25 20:27:29] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-25 20:27:29] Checking for apptainer binary...
[2025-07-25 20:27:29] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-25 20:27:29] Running /usr/bin/apptainer --version
[2025-07-25 20:27:29] apptainer version 1.3.2-1.el7
[2025-07-25 20:27:29] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-25 20:27:30] c-205-28.aglt2.org
[2025-07-25 20:27:30] apptainer works
[2025-07-25 20:27:31] Set ATHENA_PROC_NUMBER=12
[2025-07-25 20:27:31] Set ATHENA_CORE_NUMBER=12
[2025-07-25 20:27:31] Starting ATLAS job with PandaID=6745055774
[2025-07-25 20:27:31] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-25 21:52:58]  *** The last 200 lines of the pilot log: ***
[2025-07-25 21:52:58]  lfn=log.45743349._021964.job.log.tgz.1
[2025-07-25 21:52:58]  mtime=0
[2025-07-25 21:52:58]  protocol_id=None
[2025-07-25 21:52:58]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-07-25 21:52:58]  replicas=None
[2025-07-25 21:52:58]  scope=mc23_13p6TeV
[2025-07-25 21:52:58]  status=None
[2025-07-25 21:52:58]  status_code=0
[2025-07-25 21:52:58]  storage_token=
[2025-07-25 21:52:58]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6745055774/log.45743349._021964.job.log.tgz.1
[2025-07-25 21:52:58]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/f7/a1/log.45743349._021964.job.log.tgz.1
[2025-07-25 21:52:58]  workdir=None
[2025-07-25 21:52:58] ]
[2025-07-25 21:52:58] 2025-07-26 01:52:18,083 | INFO     | transferring file log.45743349._021964.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6745055774/log.45743349._021964.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-07-25 21:52:58] 2025-07-26 01:52:18,084 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6745055774/log.45743349._021964.job.log.tgz.1 /tmp/boinchome/slots/0/log.45743349._021964.job
[2025-07-25 21:52:58] 2025-07-26 01:52:18,105 | INFO     | adding to output.list: log.45743349._021964.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/f7/a1/log.45743349._021964.job.log.tg
[2025-07-25 21:52:58] 2025-07-26 01:52:18,106 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-25 21:52:58] 2025-07-26 01:52:18,106 | INFO     | summary of transferred files:
[2025-07-25 21:52:58] 2025-07-26 01:52:18,107 | INFO     |  -- lfn=log.45743349._021964.job.log.tgz.1, status_code=0, status=transferred
[2025-07-25 21:52:58] 2025-07-26 01:52:18,107 | INFO     | stage-out finished correctly
[2025-07-25 21:52:58] 2025-07-26 01:52:20,236 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-25 21:52:58] 2025-07-26 01:52:20,474 | INFO     | job 6745055774 has state=finished
[2025-07-25 21:52:58] 2025-07-26 01:52:20,474 | INFO     | preparing for final server update for job 6745055774 in state='finished'
[2025-07-25 21:52:58] 2025-07-26 01:52:20,475 | INFO     | this job has now completed (state=finished)
[2025-07-25 21:52:58] 2025-07-26 01:52:20,475 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-25 21:52:58] 2025-07-26 01:52:20,475 | INFO     | log transfer has been attempted: DONE
[2025-07-25 21:52:58] 2025-07-26 01:52:20,475 | INFO     | job 6745055774 has finished - writing final server update
[2025-07-25 21:52:58] 2025-07-26 01:52:20,476 | INFO     | total number of processed events: 400 (read)
[2025-07-25 21:52:58] 2025-07-26 01:52:20,476 | INFO     | executing command: lscpu
[2025-07-25 21:52:58] 2025-07-26 01:52:20,485 | INFO     | monitor loop #380: job 0:6745055774 is in state 'finished'
[2025-07-25 21:52:58] 2025-07-26 01:52:20,485 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-25 21:52:58] 2025-07-26 01:52:20,503 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-25 21:52:58] 2025-07-26 01:52:22,988 | INFO     | monitor loop #381: job 0:6745055774 is in state 'finished'
[2025-07-25 21:52:58] 2025-07-26 01:52:22,988 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-25 21:52:58] 2025-07-26 01:52:25,451 | INFO     | CPU arch script returned: x86-64-v2
[2025-07-25 21:52:58] 2025-07-26 01:52:25,454 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1695.8333333333333
[2025-07-25 21:52:58] 2025-07-26 01:52:25,457 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6745055774/memory_monitor_summary.json (trf name=prmon)
[2025-07-25 21:52:58] 2025-07-26 01:52:25,457 | INFO     | extracted standard info from prmon json
[2025-07-25 21:52:58] 2025-07-26 01:52:25,458 | INFO     | extracted standard memory fields from prmon json
[2025-07-25 21:52:58] 2025-07-26 01:52:25,458 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-25 21:52:58] 2025-07-26 01:52:25,458 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-25 21:52:58] 2025-07-26 01:52:25,458 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-25 21:52:58] 2025-07-26 01:52:25,460 | INFO     | fitting pss+swap vs Time
[2025-07-25 21:52:58] 2025-07-26 01:52:25,461 | INFO     | sum of square deviations: 136095575.0
[2025-07-25 21:52:58] 2025-07-26 01:52:25,461 | INFO     | sum of deviations: -9762400289.000002
[2025-07-25 21:52:58] 2025-07-26 01:52:25,462 | INFO     | mean x: 1753492287.5
[2025-07-25 21:52:58] 2025-07-26 01:52:25,462 | INFO     | mean y: 2820128.1052631577
[2025-07-25 21:52:58] 2025-07-26 01:52:25,462 | INFO     | -- intersect: 125784232302.96307
[2025-07-25 21:52:58] 2025-07-26 01:52:25,462 | INFO     | intersect: 125784232302.96307
[2025-07-25 21:52:58] 2025-07-26 01:52:25,462 | INFO     | chi2: 0.09878153188161799
[2025-07-25 21:52:58] 2025-07-26 01:52:25,462 | INFO     | -- intersect: 125784232302.96307
[2025-07-25 21:52:58] 2025-07-26 01:52:25,463 | INFO     | current memory leak: -71.73 B/s (using 76 data points, chi2=0.10)
[2025-07-25 21:52:58] 2025-07-26 01:52:25,463 | INFO     | could have reported an average CPU frequency of 2056 MHz (6 samples)
[2025-07-25 21:52:58] 2025-07-26 01:52:25,463 | INFO     | ..............................
[2025-07-25 21:52:58] 2025-07-26 01:52:25,463 | INFO     | . Timing measurements:
[2025-07-25 21:52:58] 2025-07-26 01:52:25,464 | INFO     | . get job = 0 s
[2025-07-25 21:52:58] 2025-07-26 01:52:25,464 | INFO     | . initial setup = 2 s
[2025-07-25 21:52:58] 2025-07-26 01:52:25,464 | INFO     | . payload setup = 9 s
[2025-07-25 21:52:58] 2025-07-26 01:52:25,464 | INFO     | . stage-in = 0 s
[2025-07-25 21:52:58] 2025-07-26 01:52:25,464 | INFO     | . payload execution = 5044 s
[2025-07-25 21:52:58] 2025-07-26 01:52:25,464 | INFO     | . stage-out = 0 s
[2025-07-25 21:52:58] 2025-07-26 01:52:25,464 | INFO     | . log creation = 0 s
[2025-07-25 21:52:58] 2025-07-26 01:52:25,464 | INFO     | ..............................
[2025-07-25 21:52:58] 2025-07-26 01:52:25,817 | INFO     | 
[2025-07-25 21:52:58] 2025-07-26 01:52:25,818 | INFO     | job summary report
[2025-07-25 21:52:58] 2025-07-26 01:52:25,826 | INFO     | --------------------------------------------------
[2025-07-25 21:52:58] 2025-07-26 01:52:25,827 | INFO     | PanDA job id: 6745055774
[2025-07-25 21:52:58] 2025-07-26 01:52:25,827 | INFO     | task id: 45743349
[2025-07-25 21:52:58] 2025-07-26 01:52:25,827 | INFO     | errors: (none)
[2025-07-25 21:52:58] 2025-07-26 01:52:25,827 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-25 21:52:58] 2025-07-26 01:52:25,827 | INFO     | pilot state: finished 
[2025-07-25 21:52:58] 2025-07-26 01:52:25,827 | INFO     | transexitcode: 0
[2025-07-25 21:52:58] 2025-07-26 01:52:25,827 | INFO     | exeerrorcode: 0
[2025-07-25 21:52:58] 2025-07-26 01:52:25,827 | INFO     | exeerrordiag: 
[2025-07-25 21:52:58] 2025-07-26 01:52:25,828 | INFO     | exitcode: 0
[2025-07-25 21:52:58] 2025-07-26 01:52:25,828 | INFO     | exitmsg: OK
[2025-07-25 21:52:58] 2025-07-26 01:52:25,828 | INFO     | cpuconsumptiontime: 54363 s
[2025-07-25 21:52:58] 2025-07-26 01:52:25,828 | INFO     | nevents: 400
[2025-07-25 21:52:58] 2025-07-26 01:52:25,828 | INFO     | neventsw: 0
[2025-07-25 21:52:58] 2025-07-26 01:52:25,828 | INFO     | pid: 25128
[2025-07-25 21:52:58] 2025-07-26 01:52:25,828 | INFO     | pgrp: 25128
[2025-07-25 21:52:58] 2025-07-26 01:52:25,828 | INFO     | corecount: 12
[2025-07-25 21:52:58] 2025-07-26 01:52:25,829 | INFO     | event service: False
[2025-07-25 21:52:58] 2025-07-26 01:52:25,829 | INFO     | sizes: {0: 2397471, 5: 2397733, 11: 2397789, 5057: 2424097, 5058: 2433095, 5060: 2433151, 5066: 2433473}
[2025-07-25 21:52:58] 2025-07-26 01:52:25,829 | INFO     | --------------------------------------------------
[2025-07-25 21:52:58] 2025-07-26 01:52:25,829 | INFO     | 
[2025-07-25 21:52:58] 2025-07-26 01:52:25,829 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-07-25 21:52:58] 2025-07-26 01:52:25,850 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-25 21:52:58] 2025-07-26 01:52:25,850 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-25 21:52:58] 2025-07-26 01:52:25,850 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-25 21:52:58] 2025-07-26 01:52:25,850 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-25 21:52:58] 2025-07-26 01:52:25,851 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-25 21:52:58] 2025-07-26 01:52:25,851 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-25 21:52:58] 2025-07-26 01:52:25,851 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-25 21:52:58] 2025-07-26 01:52:25,851 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-25 21:52:58] 2025-07-26 01:52:25,851 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-25 21:52:58] 2025-07-26 01:52:25,851 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-25 21:52:58] 2025-07-26 01:52:25,851 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-25 21:52:58] 2025-07-26 01:52:25,851 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-25 21:52:58] 2025-07-26 01:52:25,852 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-25 21:52:58] 2025-07-26 01:52:25,852 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-25 21:52:58] 2025-07-26 01:52:25,852 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-25 21:52:58] 2025-07-26 01:52:25,852 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-25 21:52:58] 2025-07-26 01:52:25,852 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-25 21:52:58] 2025-07-26 01:52:25,852 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-25 21:52:58] 2025-07-26 01:52:25,852 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-25 21:52:58] 2025-07-26 01:52:25,852 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-25 21:52:58] 2025-07-26 01:52:25,852 | INFO     | job 6745055774 has completed (purged errors)
[2025-07-25 21:52:58] 2025-07-26 01:52:25,853 | INFO     | overall cleanup function is called
[2025-07-25 21:52:58] 2025-07-26 01:52:26,366 | INFO     | PID=18669 has CPU usage=6.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-07-25 21:52:58] 2025-07-26 01:52:26,860 | INFO     | --- collectZombieJob: --- 10, [25128]
[2025-07-25 21:52:58] 2025-07-26 01:52:26,860 | INFO     | zombie collector waiting for pid 25128
[2025-07-25 21:52:58] 2025-07-26 01:52:26,860 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-25 21:52:58] 2025-07-26 01:52:26,860 | INFO     | collected zombie processes
[2025-07-25 21:52:58] 2025-07-26 01:52:26,861 | INFO     | will attempt to kill all subprocesses of pid=25128
[2025-07-25 21:52:58] 2025-07-26 01:52:26,948 | INFO     | process IDs to be killed: [25128] (in reverse order)
[2025-07-25 21:52:58] 2025-07-26 01:52:26,999 | WARNING  | found no corresponding commands to process id(s)
[2025-07-25 21:52:58] 2025-07-26 01:52:27,000 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-25 21:52:58] 2025-07-26 01:52:27,004 | INFO     | did not find any defunct processes belonging to 25128
[2025-07-25 21:52:58] 2025-07-26 01:52:27,006 | INFO     | did not find any defunct processes belonging to 25128
[2025-07-25 21:52:58] 2025-07-26 01:52:27,006 | INFO     | ready for new job
[2025-07-25 21:52:58] 2025-07-26 01:52:27,006 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-25 21:52:58] 2025-07-26 01:52:27,007 | INFO     | ***************************************
[2025-07-25 21:52:58] 2025-07-26 01:52:27,007 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-25 21:52:58] 2025-07-26 01:52:27,007 | INFO     | ***************************************
[2025-07-25 21:52:58] 2025-07-26 01:52:27,008 | INFO     | 
[2025-07-25 21:52:58] 2025-07-26 01:52:27,008 | INFO     | architecture information:
[2025-07-25 21:52:58] 2025-07-26 01:52:27,009 | INFO     | executing command: cat /etc/os-release
[2025-07-25 21:52:58] 2025-07-26 01:52:27,023 | INFO     | cat /etc/os-release:
[2025-07-25 21:52:58] NAME="CentOS Linux"
[2025-07-25 21:52:58] VERSION="7 (Core)"
[2025-07-25 21:52:58] ID="centos"
[2025-07-25 21:52:58] ID_LIKE="rhel fedora"
[2025-07-25 21:52:58] VERSION_ID="7"
[2025-07-25 21:52:58] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-25 21:52:58] ANSI_COLOR="0;31"
[2025-07-25 21:52:58] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-25 21:52:58] HOME_URL="https://www.centos.org/"
[2025-07-25 21:52:58] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-25 21:52:58] 
[2025-07-25 21:52:58] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-25 21:52:58] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-25 21:52:58] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-25 21:52:58] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-25 21:52:58] 
[2025-07-25 21:52:58] 2025-07-26 01:52:27,023 | INFO     | ***************************************
[2025-07-25 21:52:58] 2025-07-26 01:52:27,526 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-07-25 21:52:58] 2025-07-26 01:52:27,543 | INFO     | sufficient remaining disk space (29347545088 B)
[2025-07-25 21:52:58] 2025-07-26 01:52:27,544 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-25 21:52:58] 2025-07-26 01:52:27,544 | INFO     | current server update state: UPDATING_FINAL
[2025-07-25 21:52:58] 2025-07-26 01:52:27,544 | INFO     | update_server=False
[2025-07-25 21:52:58] 2025-07-26 01:52:27,544 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-25 21:52:58] 2025-07-26 01:52:27,544 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-25 21:52:58] 2025-07-26 01:52:27,639 | INFO     | all payload control threads have been joined
[2025-07-25 21:52:58] 2025-07-26 01:52:27,999 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-07-25 21:52:58] 2025-07-26 01:52:27,999 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-07-25 21:52:58] 2025-07-26 01:52:27,999 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-25 21:52:58] 2025-07-26 01:52:27,999 | INFO     | will abort loop
[2025-07-25 21:52:58] 2025-07-26 01:52:28,032 | INFO     | all job control threads have been joined
[2025-07-25 21:52:58] 2025-07-26 01:52:28,271 | INFO     | all data control threads have been joined
[2025-07-25 21:52:58] 2025-07-26 01:52:28,548 | INFO     | [job] queue monitor thread has finished
[2025-07-25 21:52:58] 2025-07-26 01:52:28,550 | INFO     | [job] retrieve thread has finished
[2025-07-25 21:52:58] 2025-07-26 01:52:28,645 | INFO     | [payload] control thread has finished
[2025-07-25 21:52:58] 2025-07-26 01:52:28,708 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-25 21:52:58] 2025-07-26 01:52:28,775 | INFO     | [payload] execute_payloads thread has finished
[2025-07-25 21:52:58] 2025-07-26 01:52:28,862 | INFO     | [job] create_data_payload thread has finished
[2025-07-25 21:52:58] 2025-07-26 01:52:28,870 | INFO     | [payload] failed_post thread has finished
[2025-07-25 21:52:58] 2025-07-26 01:52:29,005 | INFO     | [job] job monitor thread has finished
[2025-07-25 21:52:58] 2025-07-26 01:52:29,037 | INFO     | [job] control thread has finished
[2025-07-25 21:52:58] 2025-07-26 01:52:29,042 | INFO     | [payload] validate_pre thread has finished
[2025-07-25 21:52:58] 2025-07-26 01:52:29,276 | INFO     | [data] control thread has finished
[2025-07-25 21:52:58] 2025-07-26 01:52:29,307 | INFO     | [data] copytool_in thread has finished
[2025-07-25 21:52:58] 2025-07-26 01:52:29,559 | INFO     | [payload] validate_post thread has finished
[2025-07-25 21:52:58] 2025-07-26 01:52:29,927 | INFO     | [job] validate thread has finished
[2025-07-25 21:52:58] 2025-07-26 01:52:30,713 | INFO     | [data] copytool_out thread has finished
[2025-07-25 21:52:58] 2025-07-26 01:52:30,829 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-25 21:52:58] 2025-07-26 01:52:34,834 | INFO     | [data] queue_monitor thread has finished
[2025-07-25 21:52:58] 2025-07-26 01:52:38,109 | INFO     | job.realtimelogging is not enabled
[2025-07-25 21:52:58] 2025-07-26 01:52:39,114 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-25 21:52:58] 2025-07-26 01:52:40,929 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139629168863040)>', '<ExcThread(monitor, started 139628464019200)>']
[2025-07-25 21:52:58] 2025-07-26 01:52:45,955 | INFO     | all workflow threads have been joined
[2025-07-25 21:52:58] 2025-07-26 01:52:45,955 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-25 21:52:58] 2025-07-26 01:52:45,956 | INFO     | traces error code: 0
[2025-07-25 21:52:58] 2025-07-26 01:52:45,956 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-25 21:52:58] 2025-07-26 01:52:58,540 | INFO     | PID=18669 has CPU usage=0.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-07-25 21:52:58] 2025-07-26 01:52:58,599 | INFO     | found 0 job(s) in 20 queues
[2025-07-25 21:52:58] 2025-07-26 01:52:58,599 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-25 21:52:58] 2025-07-26 01:52:58,599 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-25 21:52:58] 2025-07-26 01:52:58,599 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-25 21:52:58] 2025-07-26 01:52:58,599 | INFO     | [monitor] control thread has ended
[2025-07-25 21:52:58] 2025-07-26 01:52:58,683 [wrapper] ==== pilot stdout END ====
[2025-07-25 21:52:58] 2025-07-26 01:52:58,687 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-25 21:52:58] 2025-07-26 01:52:58,691 [wrapper] pilotpid: 18669
[2025-07-25 21:52:58] 2025-07-26 01:52:58,695 [wrapper] Pilot exit status: 0
[2025-07-25 21:52:58] 2025-07-26 01:52:58,710 [wrapper] pandaids: 6745055774
[2025-07-25 21:52:58] 2025-07-26 01:52:58,750 [wrapper] cleanup supervisor_pilot  7919 18670
[2025-07-25 21:52:58] 2025-07-26 01:52:58,754 [wrapper] Test setup, not cleaning
[2025-07-25 21:52:58] 2025-07-26 01:52:58,758 [wrapper] apfmon messages muted
[2025-07-25 21:52:58] 2025-07-26 01:52:58,762 [wrapper] ==== wrapper stdout END ====
[2025-07-25 21:52:58] 2025-07-26 01:52:58,766 [wrapper] ==== wrapper stderr END ====
[2025-07-25 21:52:58]  *** Error codes and diagnostics ***
[2025-07-25 21:52:58]     "exeErrorCode": 0,
[2025-07-25 21:52:58]     "exeErrorDiag": "",
[2025-07-25 21:52:58]     "pilotErrorCode": 0,
[2025-07-25 21:52:58]     "pilotErrorDiag": "",
[2025-07-25 21:52:58]  *** Listing of results directory ***
[2025-07-25 21:52:58] total 433028
[2025-07-25 21:52:58] -rw-r--r-- 1 boincer umatlas    530466 Jul 25 09:22 pilot3.tar.gz
[2025-07-25 21:52:58] -rw-r--r-- 1 boincer umatlas      5112 Jul 25 09:43 queuedata.json
[2025-07-25 21:52:58] -rwx------ 1 boincer umatlas     36292 Jul 25 09:43 runpilot2-wrapper.sh
[2025-07-25 21:52:58] -rw-r--r-- 1 boincer umatlas       100 Jul 25 20:27 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-25 21:52:58] -rwxr-xr-x 1 boincer umatlas      7986 Jul 25 20:27 run_atlas
[2025-07-25 21:52:58] -rw-r--r-- 1 boincer umatlas       105 Jul 25 20:27 job.xml
[2025-07-25 21:52:58] -rw-r--r-- 2 boincer umatlas 229717908 Jul 25 20:27 EVNT.45743347._001253.pool.root.1
[2025-07-25 21:52:58] -rw-r--r-- 2 boincer umatlas     15095 Jul 25 20:27 start_atlas.sh
[2025-07-25 21:52:58] drwxrwx--x 2 boincer umatlas      4096 Jul 25 20:27 shared
[2025-07-25 21:52:58] -rw-r--r-- 2 boincer umatlas    542894 Jul 25 20:27 input.tar.gz
[2025-07-25 21:52:58] -rw-r--r-- 1 boincer umatlas         0 Jul 25 20:27 boinc_lockfile
[2025-07-25 21:52:58] -rw-r--r-- 1 boincer umatlas      2561 Jul 25 20:27 pandaJob.out
[2025-07-25 21:52:58] -rw------- 1 boincer umatlas    979993 Jul 25 20:27 agis_schedconf.cvmfs.json
[2025-07-25 21:52:58] -rw------- 1 boincer umatlas   1593052 Jul 25 20:27 agis_ddmendpoints.agis.ALL.json
[2025-07-25 21:52:58] drwx------ 4 boincer umatlas      4096 Jul 25 20:27 pilot3
[2025-07-25 21:52:58] -rw-r--r-- 1 boincer umatlas      5867 Jul 25 21:48 init_data.xml
[2025-07-25 21:52:58] -rw-r--r-- 1 boincer umatlas       529 Jul 25 21:51 boinc_task_state.xml
[2025-07-25 21:52:58] -rw------- 1 boincer umatlas 208150209 Jul 25 21:51 HITS.45743349._021964.pool.root.1
[2025-07-25 21:52:58] -rw------- 1 boincer umatlas      1051 Jul 25 21:52 memory_monitor_summary.json
[2025-07-25 21:52:58] -rw------- 1 boincer umatlas    356454 Jul 25 21:52 log.45743349._021964.job.log.tgz.1
[2025-07-25 21:52:58] -rw-r--r-- 1 boincer umatlas        27 Jul 25 21:52 wrapper_checkpoint.txt
[2025-07-25 21:52:58] -rw------- 1 boincer umatlas      7857 Jul 25 21:52 heartbeat.json
[2025-07-25 21:52:58] -rw------- 1 boincer umatlas       745 Jul 25 21:52 pilotlog.txt
[2025-07-25 21:52:58] -rw------- 1 boincer umatlas        95 Jul 25 21:52 pilot_heartbeat.json
[2025-07-25 21:52:58] -rw-r--r-- 1 boincer umatlas      8192 Jul 25 21:52 boinc_mmap_file
[2025-07-25 21:52:58] -rw------- 1 boincer umatlas    482913 Jul 25 21:52 log.45743349._021964.job.log.1
[2025-07-25 21:52:58] -rw------- 1 boincer umatlas       357 Jul 25 21:52 output.list
[2025-07-25 21:52:58] -rw-r--r-- 1 boincer umatlas       620 Jul 25 21:52 runtime_log
[2025-07-25 21:52:58] -rw------- 1 boincer umatlas    860160 Jul 25 21:52 result.tar.gz
[2025-07-25 21:52:58] -rw-r--r-- 1 boincer umatlas      8662 Jul 25 21:52 runtime_log.err
[2025-07-25 21:52:58] -rw------- 1 boincer umatlas       659 Jul 25 21:52 4lMKDmWtXz7n9Rq4apOajLDm4fhM0noT9bVof3QYDma2yKDmj074zn.diag
[2025-07-25 21:52:58] -rw-r--r-- 1 boincer umatlas     21728 Jul 25 21:52 stderr.txt
[2025-07-25 21:52:58] HITS file was successfully produced:
[2025-07-25 21:52:58] -rw------- 1 boincer umatlas 208150209 Jul 25 21:51 shared/HITS.pool.root.1
[2025-07-25 21:52:58]  *** Contents of shared directory: ***
[2025-07-25 21:52:58] total 429000
[2025-07-25 21:52:58] -rw-r--r-- 2 boincer umatlas 229717908 Jul 25 20:27 ATLAS.root_0
[2025-07-25 21:52:58] -rw-r--r-- 2 boincer umatlas     15095 Jul 25 20:27 start_atlas.sh
[2025-07-25 21:52:58] -rw-r--r-- 2 boincer umatlas    542894 Jul 25 20:27 input.tar.gz
[2025-07-25 21:52:58] -rw------- 1 boincer umatlas 208150209 Jul 25 21:51 HITS.pool.root.1
[2025-07-25 21:52:58] -rw------- 1 boincer umatlas    860160 Jul 25 21:52 result.tar.gz
21:53:00 (15060): run_atlas exited; CPU time 54326.572003
21:53:00 (15060): called boinc_finish(0)

</stderr_txt>
]]>

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