Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
17:36:58 (3427036): wrapper (7.7.26015): starting
17:36:58 (3427036): wrapper: running run_atlas (--nthreads 12)
[2025-07-25 17:36:58] Arguments: --nthreads 12
[2025-07-25 17:36:58] Threads: 12
[2025-07-25 17:36:58] Checking for CVMFS
[2025-07-25 17:36:58] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-25 17:36:59] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-25 17:36:59] Running cvmfs_config stat atlas.cern.ch
[2025-07-25 17:37:00] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-25 17:37:00] 2.11.5.0 11320 23211 218032 148758 1 828 24543541 45568000 17910 130560 0 191157740 99.769 122918609 21808 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.163:3129 1
[2025-07-25 17:37:00] CVMFS is ok
[2025-07-25 17:37:00] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-25 17:37:00] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-25 17:37:00] Further information can be found at the LHC@home message board.
[2025-07-25 17:37:00] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-25 17:37:00] Checking for apptainer binary...
[2025-07-25 17:37:00] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-25 17:37:00] Running /usr/bin/apptainer --version
[2025-07-25 17:37:00] apptainer version 1.4.1-1.el9
[2025-07-25 17:37:00] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-25 17:37:01] wns0066.triumf.lcg
[2025-07-25 17:37:01] apptainer works
[2025-07-25 17:37:01] Set ATHENA_PROC_NUMBER=12
[2025-07-25 17:37:01] Set ATHENA_CORE_NUMBER=12
[2025-07-25 17:37:01] Starting ATLAS job with PandaID=6745062487
[2025-07-25 17:37:01] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-25 17:41:59]  *** The last 200 lines of the pilot log: ***
[2025-07-25 17:41:59] 2025-07-26 00:41:25,790 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-25 17:41:59] 2025-07-26 00:41:25,791 | WARNING  | wrong length of table data, x=[1753490316.0], y=[2139.0] (must be same and length>=4)
[2025-07-25 17:41:59] 2025-07-26 00:41:25,791 | INFO     | could have reported an average CPU frequency of 2590 MHz (4 samples)
[2025-07-25 17:41:59] 2025-07-26 00:41:25,791 | INFO     | ..............................
[2025-07-25 17:41:59] 2025-07-26 00:41:25,791 | INFO     | . Timing measurements:
[2025-07-25 17:41:59] 2025-07-26 00:41:25,791 | INFO     | . get job = 0 s
[2025-07-25 17:41:59] 2025-07-26 00:41:25,791 | INFO     | . initial setup = 4 s
[2025-07-25 17:41:59] 2025-07-26 00:41:25,791 | INFO     | . payload setup = 12 s
[2025-07-25 17:41:59] 2025-07-26 00:41:25,791 | INFO     | . stage-in = 0 s
[2025-07-25 17:41:59] 2025-07-26 00:41:25,791 | INFO     | . payload execution = 39 s
[2025-07-25 17:41:59] 2025-07-26 00:41:25,791 | INFO     | . stage-out = 1 s
[2025-07-25 17:41:59] 2025-07-26 00:41:25,791 | INFO     | . log creation = 0 s
[2025-07-25 17:41:59] 2025-07-26 00:41:25,791 | INFO     | ..............................
[2025-07-25 17:41:59] 2025-07-26 00:41:25,791 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-07-25 17:41:59] 2025-07-26 00:41:25,792 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6745062487/pilotlog.txt
[2025-07-25 17:41:59] 2025-07-26 00:41:25,972 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-07-25 17:41:59] - Log from pilotlog.txt -
[2025-07-25 17:41:59] 2025-07-26 00:41:25,789 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6745062487/memory_monitor_summary.json (trf name=prmon)
[2025-07-25 17:41:59] 2025-07-26 00:41:25,790 | INFO     | extracted standard info from prmon json
[2025-07-25 17:41:59] 2025-07-26 00:41:25,790 | INFO     | extracted standard memory fields from prmon json
[2025-07-25 17:41:59] 2025-07-26 00:41:25,790 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-25 17:41:59] 2025-07-26 00:41:25,790 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-25 17:41:59] 2025-07-26 00:41:25,790 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-25 17:41:59] 2025-07-26 00:41:25,791 | WARNING  | wrong length of table data, x=[1753490316.0], y=[2139.0] (must be same and length>=4)
[2025-07-25 17:41:59] 2025-07-26 00:41:25,791 | INFO     | could have reported an average CPU frequency of 2590 MHz (4 samples)
[2025-07-25 17:41:59] 2025-07-26 00:41:25,791 | INFO     | ..............................
[2025-07-25 17:41:59] 2025-07-26 00:41:25,791 | INFO     | . Timing measurements:
[2025-07-25 17:41:59] 2025-07-26 00:41:25,791 | INFO     | . get job = 0 s
[2025-07-25 17:41:59] 2025-07-26 00:41:25,791 | INFO     | . initial setup = 4 s
[2025-07-25 17:41:59] 2025-07-26 00:41:25,791 | INFO     | . payload setup = 12 s
[2025-07-25 17:41:59] 2025-07-26 00:41:25,791 | INFO     | . stage-in = 0 s
[2025-07-25 17:41:59] 2025-07-26 00:41:25,791 | INFO     | . payload execution = 39 s
[2025-07-25 17:41:59] 2025-07-26 00:41:25,791 | INFO     | . stage-out = 1 s
[2025-07-25 17:41:59] 2025-07-26 00:41:25,791 | INFO     | . log creation = 0 s
[2025-07-25 17:41:59] 2025-07-26 00:41:25,791 | INFO     | ..............................
[2025-07-25 17:41:59] 2025-07-26 00:41:25,791 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-07-25 17:41:59] 2025-07-26 00:41:25,792 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6745062487/pilotlog.txt
[2025-07-25 17:41:59] 2025-07-26 00:41:25,972 | WARNING  | 
[2025-07-25 17:41:59] [begin log extracts]
[2025-07-25 17:41:59] - Log from pilotlog.txt -
[2025-07-25 17:41:59] 2025-07-26 00:41:25,789 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6745062487/memory_monitor_summary.json (trf name=prmon)
[2025-07-25 17:41:59] 2025-07-26 00:41:25,790 | INFO     | extracted standard info from prmon json
[2025-07-25 17:41:59] 2025-07-26 00:41:25,790 | INFO     | extracted standard memory fields from prmon json
[2025-07-25 17:41:59] 2025-07-26 00:41:25,790 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-25 17:41:59] 2025-07-26 00:41:25,790 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-25 17:41:59] 2025-07-26 00:41:25,790 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-25 17:41:59] 2025-07-26 00:41:25,791 | WARNING  | wrong length of table data, x=[1753490316.0], y=[2139.0] (must be same and length>=4)
[2025-07-25 17:41:59] 2025-07-26 00:41:25,791 | INFO     | could have reported an average CPU frequency of 2590 MHz (4 samples)
[2025-07-25 17:41:59] 2025-07-26 00:41:25,791 | INFO     | ..............................
[2025-07-25 17:41:59] 2025-07-26 00:41:25,791 | INFO     | . Timing measurements:
[2025-07-25 17:41:59] 2025-07-26 00:41:25,791 | INFO     | . get job = 0 s
[2025-07-25 17:41:59] 2025-07-26 00:41:25,791 | INFO     | . initial setup = 4 s
[2025-07-25 17:41:59] 2025-07-26 00:41:25,791 | INFO     | . payload setup = 12 s
[2025-07-25 17:41:59] 2025-07-26 00:41:25,791 | INFO     | . stage-in = 0 s
[2025-07-25 17:41:59] 2025-07-26 00:41:25,791 | INFO     | . payload execution = 39 s
[2025-07-25 17:41:59] 2025-07-26 00:41:25,791 | INFO     | . stage-out = 1 s
[2025-07-25 17:41:59] 2025-07-26 00:41:25,791 | INFO     | . log creation = 0 s
[2025-07-25 17:41:59] 2025-07-26 00:41:25,791 | INFO     | ..............................
[2025-07-25 17:41:59] 2025-07-26 00:41:25,791 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-07-25 17:41:59] 2025-07-26 00:41:25,792 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6745062487/pilotlog.txt
[2025-07-25 17:41:59] [end log extracts]
[2025-07-25 17:41:59] 2025-07-26 00:41:25,973 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-07-25 17:41:59] 2025-07-26 00:41:25,973 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-07-25 17:41:59] 2025-07-26 00:41:26,485 | INFO     | 
[2025-07-25 17:41:59] 2025-07-26 00:41:26,485 | INFO     | job summary report
[2025-07-25 17:41:59] 2025-07-26 00:41:26,485 | INFO     | --------------------------------------------------
[2025-07-25 17:41:59] 2025-07-26 00:41:26,485 | INFO     | PanDA job id: 6745062487
[2025-07-25 17:41:59] 2025-07-26 00:41:26,486 | INFO     | task id: 45743349
[2025-07-25 17:41:59] 2025-07-26 00:41:26,486 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-07-25 17:38:53,633 CRITICAL Transform executor raised TransformValidationExceptio
[2025-07-25 17:41:59] 2025-07-26 00:41:26,486 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-25 17:41:59] 2025-07-26 00:41:26,486 | INFO     | pilot state: failed 
[2025-07-25 17:41:59] 2025-07-26 00:41:26,486 | INFO     | transexitcode: 65
[2025-07-25 17:41:59] 2025-07-26 00:41:26,486 | INFO     | exeerrorcode: 65
[2025-07-25 17:41:59] 2025-07-26 00:41:26,486 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2025-07-25 17:41:59] 2025-07-26 00:41:26,486 | INFO     | exitcode: 65
[2025-07-25 17:41:59] 2025-07-26 00:41:26,486 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2025-07-25 17:41:59] 2025-07-26 00:41:26,486 | INFO     | cpuconsumptiontime: 17 s
[2025-07-25 17:41:59] 2025-07-26 00:41:26,486 | INFO     | nevents: 0
[2025-07-25 17:41:59] 2025-07-26 00:41:26,486 | INFO     | neventsw: 0
[2025-07-25 17:41:59] 2025-07-26 00:41:26,486 | INFO     | pid: 3444154
[2025-07-25 17:41:59] 2025-07-26 00:41:26,486 | INFO     | pgrp: 3444154
[2025-07-25 17:41:59] 2025-07-26 00:41:26,486 | INFO     | corecount: 12
[2025-07-25 17:41:59] 2025-07-26 00:41:26,486 | INFO     | event service: False
[2025-07-25 17:41:59] 2025-07-26 00:41:26,486 | INFO     | sizes: {0: 2397472, 11: 2397472, 13: 2397762, 22: 2397818, 56: 2421109, 58: 2425401, 60: 2425557, 200: 2425723}
[2025-07-25 17:41:59] 2025-07-26 00:41:26,486 | INFO     | --------------------------------------------------
[2025-07-25 17:41:59] 2025-07-26 00:41:26,486 | INFO     | 
[2025-07-25 17:41:59] 2025-07-26 00:41:26,486 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-07-25 17:41:59] 2025-07-26 00:41:26,607 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-25 17:41:59] 2025-07-26 00:41:26,607 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-25 17:41:59] 2025-07-26 00:41:26,607 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-25 17:41:59] 2025-07-26 00:41:26,607 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-25 17:41:59] 2025-07-26 00:41:26,607 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-25 17:41:59] 2025-07-26 00:41:26,607 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-25 17:41:59] 2025-07-26 00:41:26,607 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-25 17:41:59] 2025-07-26 00:41:26,607 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-25 17:41:59] 2025-07-26 00:41:26,607 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-25 17:41:59] 2025-07-26 00:41:26,608 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-25 17:41:59] 2025-07-26 00:41:26,608 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-25 17:41:59] 2025-07-26 00:41:26,608 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-25 17:41:59] 2025-07-26 00:41:26,608 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-25 17:41:59] 2025-07-26 00:41:26,608 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-25 17:41:59] 2025-07-26 00:41:26,608 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-25 17:41:59] 2025-07-26 00:41:26,608 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-25 17:41:59] 2025-07-26 00:41:26,608 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-25 17:41:59] 2025-07-26 00:41:26,608 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-25 17:41:59] 2025-07-26 00:41:26,608 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-25 17:41:59] 2025-07-26 00:41:26,608 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-25 17:41:59] 2025-07-26 00:41:26,608 | INFO     | job 6745062487 has completed (purged errors)
[2025-07-25 17:41:59] 2025-07-26 00:41:26,608 | INFO     | overall cleanup function is called
[2025-07-25 17:41:59] 2025-07-26 00:41:27,616 | INFO     | --- collectZombieJob: --- 10, [3444154]
[2025-07-25 17:41:59] 2025-07-26 00:41:27,616 | INFO     | zombie collector waiting for pid 3444154
[2025-07-25 17:41:59] 2025-07-26 00:41:27,616 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-25 17:41:59] 2025-07-26 00:41:27,617 | INFO     | collected zombie processes
[2025-07-25 17:41:59] 2025-07-26 00:41:27,617 | INFO     | will attempt to kill all subprocesses of pid=3444154
[2025-07-25 17:41:59] 2025-07-26 00:41:28,234 | INFO     | process IDs to be killed: [3444154] (in reverse order)
[2025-07-25 17:41:59] 2025-07-26 00:41:28,424 | WARNING  | found no corresponding commands to process id(s)
[2025-07-25 17:41:59] 2025-07-26 00:41:28,424 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-25 17:41:59] 2025-07-26 00:41:28,444 | INFO     | did not find any defunct processes belonging to 3444154
[2025-07-25 17:41:59] 2025-07-26 00:41:28,470 | INFO     | did not find any defunct processes belonging to 3444154
[2025-07-25 17:41:59] 2025-07-26 00:41:28,470 | INFO     | ready for new job
[2025-07-25 17:41:59] 2025-07-26 00:41:28,470 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-25 17:41:59] 2025-07-26 00:41:28,488 | INFO     | ***************************************
[2025-07-25 17:41:59] 2025-07-26 00:41:28,489 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-25 17:41:59] 2025-07-26 00:41:28,489 | INFO     | ***************************************
[2025-07-25 17:41:59] 2025-07-26 00:41:28,489 | INFO     | 
[2025-07-25 17:41:59] 2025-07-26 00:41:28,491 | INFO     | architecture information:
[2025-07-25 17:41:59] 2025-07-26 00:41:28,512 | INFO     | executing command: cat /etc/os-release
[2025-07-25 17:41:59] 2025-07-26 00:41:28,552 | INFO     | cat /etc/os-release:
[2025-07-25 17:41:59] NAME="CentOS Linux"
[2025-07-25 17:41:59] VERSION="7 (Core)"
[2025-07-25 17:41:59] ID="centos"
[2025-07-25 17:41:59] ID_LIKE="rhel fedora"
[2025-07-25 17:41:59] VERSION_ID="7"
[2025-07-25 17:41:59] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-25 17:41:59] ANSI_COLOR="0;31"
[2025-07-25 17:41:59] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-25 17:41:59] HOME_URL="https://www.centos.org/"
[2025-07-25 17:41:59] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-25 17:41:59] 
[2025-07-25 17:41:59] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-25 17:41:59] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-25 17:41:59] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-25 17:41:59] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-25 17:41:59] 
[2025-07-25 17:41:59] 2025-07-26 00:41:28,553 | INFO     | ***************************************
[2025-07-25 17:41:59] 2025-07-26 00:41:29,060 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-07-25 17:41:59] 2025-07-26 00:41:29,094 | INFO     | sufficient remaining disk space (1989298618368 B)
[2025-07-25 17:41:59] 2025-07-26 00:41:29,094 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-25 17:41:59] 2025-07-26 00:41:29,094 | INFO     | current server update state: UPDATING_FINAL
[2025-07-25 17:41:59] 2025-07-26 00:41:29,094 | INFO     | update_server=False
[2025-07-25 17:41:59] 2025-07-26 00:41:29,094 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-25 17:41:59] 2025-07-26 00:41:29,522 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-07-25 17:41:59] 2025-07-26 00:41:29,522 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-07-25 17:41:59] 2025-07-26 00:41:29,523 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-25 17:41:59] 2025-07-26 00:41:29,523 | INFO     | will abort loop
[2025-07-25 17:41:59] 2025-07-26 00:41:29,827 | INFO     | all job control threads have been joined
[2025-07-25 17:41:59] 2025-07-26 00:41:29,966 | INFO     | all data control threads have been joined
[2025-07-25 17:41:59] 2025-07-26 00:41:30,100 | INFO     | [job] retrieve thread has finished
[2025-07-25 17:41:59] 2025-07-26 00:41:30,106 | INFO     | [payload] validate_pre thread has finished
[2025-07-25 17:41:59] 2025-07-26 00:41:30,166 | INFO     | all payload control threads have been joined
[2025-07-25 17:41:59] 2025-07-26 00:41:30,244 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-25 17:41:59] 2025-07-26 00:41:30,528 | INFO     | [job] job monitor thread has finished
[2025-07-25 17:41:59] 2025-07-26 00:41:30,766 | INFO     | [payload] execute_payloads thread has finished
[2025-07-25 17:41:59] 2025-07-26 00:41:30,780 | INFO     | [data] copytool_in thread has finished
[2025-07-25 17:41:59] 2025-07-26 00:41:30,833 | INFO     | [job] control thread has finished
[2025-07-25 17:41:59] 2025-07-26 00:41:30,921 | INFO     | [payload] validate_post thread has finished
[2025-07-25 17:41:59] 2025-07-26 00:41:30,972 | INFO     | [data] control thread has finished
[2025-07-25 17:41:59] 2025-07-26 00:41:31,172 | INFO     | [payload] control thread has finished
[2025-07-25 17:41:59] 2025-07-26 00:41:31,439 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-25 17:41:59] 2025-07-26 00:41:31,455 | INFO     | [job] create_data_payload thread has finished
[2025-07-25 17:41:59] 2025-07-26 00:41:31,495 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-25 17:41:59] 2025-07-26 00:41:31,548 | INFO     | [payload] failed_post thread has finished
[2025-07-25 17:41:59] 2025-07-26 00:41:31,549 | INFO     | [job] validate thread has finished
[2025-07-25 17:41:59] 2025-07-26 00:41:32,103 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-25 17:41:59] 2025-07-26 00:41:32,251 | INFO     | [data] copytool_out thread has finished
[2025-07-25 17:41:59] 2025-07-26 00:41:32,501 | INFO     | [job] queue monitor thread has finished
[2025-07-25 17:41:59] 2025-07-26 00:41:36,112 | INFO     | [data] queue_monitor thread has finished
[2025-07-25 17:41:59] 2025-07-26 00:41:36,694 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140108316534592)>', '<ExcThread(monitor, started 140107243833088)>']
[2025-07-25 17:41:59] 2025-07-26 00:41:41,730 | INFO     | all workflow threads have been joined
[2025-07-25 17:41:59] 2025-07-26 00:41:41,730 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-25 17:41:59] 2025-07-26 00:41:41,731 | INFO     | traces error code: 0
[2025-07-25 17:41:59] 2025-07-26 00:41:41,731 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-25 17:41:59] 2025-07-26 00:41:58,611 | INFO     | PID=3434855 has CPU usage=1.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-25 17:41:59] 2025-07-26 00:41:58,611 | INFO     | .. there are 28 such processes running
[2025-07-25 17:41:59] 2025-07-26 00:41:58,612 | INFO     | found 0 job(s) in 20 queues
[2025-07-25 17:41:59] 2025-07-26 00:41:58,612 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-25 17:41:59] 2025-07-26 00:41:58,612 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-25 17:41:59] 2025-07-26 00:41:58,612 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-25 17:41:59] 2025-07-26 00:41:58,612 | CRITICAL | thread 'MainThread' is not alive
[2025-07-25 17:41:59] 2025-07-26 00:41:58,612 | INFO     | [monitor] control thread has ended
[2025-07-25 17:41:59] 2025-07-26 00:41:58,936 [wrapper] ==== pilot stdout END ====
[2025-07-25 17:41:59] 2025-07-26 00:41:58,938 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-25 17:41:59] 2025-07-26 00:41:58,940 [wrapper] pilotpid: 3434855
[2025-07-25 17:41:59] 2025-07-26 00:41:58,942 [wrapper] Pilot exit status: 0
[2025-07-25 17:41:59] 2025-07-26 00:41:58,992 [wrapper] pandaids: 6745062487
[2025-07-25 17:41:59] 2025-07-26 00:41:59,038 [wrapper] cleanup supervisor_pilot 3434871 3434856
[2025-07-25 17:41:59] 2025-07-26 00:41:59,042 [wrapper] Test setup, not cleaning
[2025-07-25 17:41:59] 2025-07-26 00:41:59,063 [wrapper] apfmon messages muted
[2025-07-25 17:41:59] 2025-07-26 00:41:59,066 [wrapper] ==== wrapper stdout END ====
[2025-07-25 17:41:59] 2025-07-26 00:41:59,068 [wrapper] ==== wrapper stderr END ====
[2025-07-25 17:41:59]  *** Error codes and diagnostics ***
[2025-07-25 17:41:59]     "exeErrorCode": 65,
[2025-07-25 17:41:59]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2025-07-25 17:41:59]     "pilotErrorCode": 1305,
[2025-07-25 17:41:59]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2025-07-25 17:41:59]  *** Listing of results directory ***
[2025-07-25 17:41:59] total 144708
[2025-07-25 17:41:59] -rw-r--r--. 1 boinc boinc    530466 Jul 25 14:12 pilot3.tar.gz
[2025-07-25 17:41:59] -rw-r--r--. 1 boinc boinc      5112 Jul 25 14:17 queuedata.json
[2025-07-25 17:41:59] -rwx------. 1 boinc boinc     36292 Jul 25 14:17 runpilot2-wrapper.sh
[2025-07-25 17:41:59] -rw-r--r--. 1 boinc boinc       100 Jul 25 17:36 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-25 17:41:59] -rwxr-xr-x. 1 boinc boinc      7986 Jul 25 17:36 run_atlas
[2025-07-25 17:41:59] -rw-r--r--. 1 boinc boinc       105 Jul 25 17:36 job.xml
[2025-07-25 17:41:59] -rw-r--r--. 1 boinc boinc      6596 Jul 25 17:36 init_data.xml
[2025-07-25 17:41:59] -rw-r--r--. 2 boinc boinc 144093970 Jul 25 17:36 EVNT.45743347._001517.pool.root.1
[2025-07-25 17:41:59] drwxrwx--x. 2 boinc boinc      4096 Jul 25 17:36 shared
[2025-07-25 17:41:59] -rw-r--r--. 2 boinc boinc    542893 Jul 25 17:36 input.tar.gz
[2025-07-25 17:41:59] -rw-r--r--. 2 boinc boinc     15095 Jul 25 17:36 start_atlas.sh
[2025-07-25 17:41:59] -rw-r--r--. 1 boinc boinc         0 Jul 25 17:36 boinc_lockfile
[2025-07-25 17:41:59] -rw-r--r--. 1 boinc boinc      2563 Jul 25 17:37 pandaJob.out
[2025-07-25 17:41:59] -rw-------. 1 boinc boinc    979993 Jul 25 17:37 agis_schedconf.cvmfs.json
[2025-07-25 17:41:59] -rw-------. 1 boinc boinc   1593052 Jul 25 17:37 agis_ddmendpoints.agis.ALL.json
[2025-07-25 17:41:59] drwx------. 4 boinc boinc      4096 Jul 25 17:37 pilot3
[2025-07-25 17:41:59] -rw-r--r--. 1 boinc boinc       524 Jul 25 17:38 boinc_task_state.xml
[2025-07-25 17:41:59] -rw-------. 1 boinc boinc       979 Jul 25 17:38 memory_monitor_summary.json
[2025-07-25 17:41:59] -rw-------. 1 boinc boinc     21421 Jul 25 17:39 log.45743349._027368.job.log.tgz.1
[2025-07-25 17:41:59] -rw-------. 1 boinc boinc      8405 Jul 25 17:41 heartbeat.json
[2025-07-25 17:41:59] -rw-r--r--. 1 boinc boinc      8192 Jul 25 17:41 boinc_mmap_file
[2025-07-25 17:41:59] -rw-r--r--. 1 boinc boinc        22 Jul 25 17:41 wrapper_checkpoint.txt
[2025-07-25 17:41:59] -rw-------. 1 boinc boinc        95 Jul 25 17:41 pilot_heartbeat.json
[2025-07-25 17:41:59] -rw-------. 1 boinc boinc       893 Jul 25 17:41 pilotlog.txt
[2025-07-25 17:41:59] -rw-------. 1 boinc boinc     81164 Jul 25 17:41 log.45743349._027368.job.log.1
[2025-07-25 17:41:59] -rw-------. 1 boinc boinc       188 Jul 25 17:41 output.list
[2025-07-25 17:41:59] -rw-r--r--. 1 boinc boinc       620 Jul 25 17:41 runtime_log
[2025-07-25 17:41:59] -rw-------. 1 boinc boinc    122880 Jul 25 17:41 result.tar.gz
[2025-07-25 17:41:59] -rw-r--r--. 1 boinc boinc      8485 Jul 25 17:41 runtime_log.err
[2025-07-25 17:41:59] -rw-------. 1 boinc boinc       644 Jul 25 17:41 N0TMDmlyez7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmZUQLDmUUAVMm.diag
[2025-07-25 17:41:59] -rw-r--r--. 1 boinc boinc     21820 Jul 25 17:41 stderr.txt
[2025-07-25 17:41:59] No HITS result produced
[2025-07-25 17:41:59]  *** Contents of shared directory: ***
[2025-07-25 17:41:59] total 141392
[2025-07-25 17:41:59] -rw-r--r--. 2 boinc boinc 144093970 Jul 25 17:36 ATLAS.root_0
[2025-07-25 17:41:59] -rw-r--r--. 2 boinc boinc    542893 Jul 25 17:36 input.tar.gz
[2025-07-25 17:41:59] -rw-r--r--. 2 boinc boinc     15095 Jul 25 17:36 start_atlas.sh
[2025-07-25 17:41:59] -rw-------. 1 boinc boinc    122880 Jul 25 17:41 result.tar.gz
17:42:00 (3427036): run_atlas exited; CPU time 25.358693
17:42:00 (3427036): called boinc_finish(0)

</stderr_txt>
]]>

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