Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
20:07:11 (3748690): wrapper (7.7.26015): starting
20:07:11 (3748690): wrapper: running run_atlas (--nthreads 8)
[2025-07-25 20:07:11] Arguments: --nthreads 8
[2025-07-25 20:07:11] Threads: 8
[2025-07-25 20:07:11] Checking for CVMFS
[2025-07-25 20:07:12] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-25 20:07:12] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-25 20:07:12] Running cvmfs_config stat atlas.cern.ch
[2025-07-25 20:07:14] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-25 20:07:14] 2.12.6.0 3074763 97671 745780 148757 1 286 19436960 32935936 27168 16776704 2 191019624 99.661 221805916 7092 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-07-25 20:07:14] CVMFS is ok
[2025-07-25 20:07:14] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-25 20:07:14] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-25 20:07:14] Further information can be found at the LHC@home message board.
[2025-07-25 20:07:14] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-25 20:07:14] Checking for apptainer binary...
[2025-07-25 20:07:14] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-25 20:07:14] Running /usr/bin/apptainer --version
[2025-07-25 20:07:14] apptainer version 1.4.1-1.el9
[2025-07-25 20:07:14] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-25 20:07:15] c6-12-25-1.aglt2.org
[2025-07-25 20:07:15] apptainer works
[2025-07-25 20:07:15] Set ATHENA_PROC_NUMBER=8
[2025-07-25 20:07:15] Set ATHENA_CORE_NUMBER=8
[2025-07-25 20:07:15] Starting ATLAS job with PandaID=6741891303
[2025-07-25 20:07:15] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-26 19:39:42]  *** The last 200 lines of the pilot log: ***
[2025-07-26 19:39:42] 2025-07-26 23:38:35,684 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-26 19:39:42] 2025-07-26 23:38:35,684 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-26 19:39:42] 2025-07-26 23:38:35,796 | INFO     | fitting pss+swap vs Time
[2025-07-26 19:39:42] 2025-07-26 23:38:35,805 | INFO     | sum of square deviations: 822032110141.0164
[2025-07-26 19:39:42] 2025-07-26 23:38:36,288 | INFO     | sum of deviations: 628936302281.7568
[2025-07-26 19:39:42] 2025-07-26 23:38:36,293 | INFO     | mean x: 1753530808.3157516
[2025-07-26 19:39:42] 2025-07-26 23:38:36,293 | INFO     | mean y: 2123851.4010115606
[2025-07-26 19:39:42] 2025-07-26 23:38:36,294 | INFO     | -- intersect: -1339501577.7200696
[2025-07-26 19:39:42] 2025-07-26 23:38:36,294 | INFO     | intersect: -1339501577.7200696
[2025-07-26 19:39:42] 2025-07-26 23:38:36,303 | INFO     | chi2: 7.6566355494687555
[2025-07-26 19:39:42] 2025-07-26 23:38:36,315 | INFO     | sum of square deviations: 813155677132.1154
[2025-07-26 19:39:42] 2025-07-26 23:38:36,801 | INFO     | sum of deviations: 932181425299.5094
[2025-07-26 19:39:42] 2025-07-26 23:38:36,802 | INFO     | mean x: 1753530655.82161
[2025-07-26 19:39:42] 2025-07-26 23:38:36,802 | INFO     | mean y: 2129057.5264684553
[2025-07-26 19:39:42] 2025-07-26 23:38:36,803 | INFO     | -- intersect: -2008074833.3388143
[2025-07-26 19:39:42] 2025-07-26 23:38:36,803 | INFO     | intersect: -2008074833.3388143
[2025-07-26 19:39:42] 2025-07-26 23:38:36,824 | INFO     | chi2: 4.755839165052409
[2025-07-26 19:39:42] 2025-07-26 23:38:36,824 | INFO     | current chi2=4.755839165052409 (change=37.886044930238505 %)
[2025-07-26 19:39:42] 2025-07-26 23:38:36,837 | INFO     | sum of square deviations: 804343384494.6235
[2025-07-26 19:39:42] 2025-07-26 23:38:37,141 | INFO     | sum of deviations: 941578183232.6777
[2025-07-26 19:39:42] 2025-07-26 23:38:37,142 | INFO     | mean x: 1753530503.3275108
[2025-07-26 19:39:42] 2025-07-26 23:38:37,142 | INFO     | mean y: 2129220.209606987
[2025-07-26 19:39:42] 2025-07-26 23:38:37,142 | INFO     | -- intersect: -2050583709.8576846
[2025-07-26 19:39:42] 2025-07-26 23:38:37,143 | INFO     | intersect: -2050583709.8576846
[2025-07-26 19:39:42] 2025-07-26 23:38:37,156 | INFO     | chi2: 4.742600439863466
[2025-07-26 19:39:42] 2025-07-26 23:38:37,156 | INFO     | current chi2=4.742600439863466 (change=0.27836780701554886 %)
[2025-07-26 19:39:42] 2025-07-26 23:38:37,156 | INFO     | right removable region: 1373
[2025-07-26 19:39:42] 2025-07-26 23:38:37,165 | INFO     | sum of square deviations: 813154228379.4725
[2025-07-26 19:39:42] 2025-07-26 23:38:37,446 | INFO     | sum of deviations: 323106001911.73035
[2025-07-26 19:39:42] 2025-07-26 23:38:37,447 | INFO     | mean x: 1753530960.822335
[2025-07-26 19:39:42] 2025-07-26 23:38:37,447 | INFO     | mean y: 2129102.1580855693
[2025-07-26 19:39:42] 2025-07-26 23:38:37,448 | INFO     | -- intersect: -694634633.6818725
[2025-07-26 19:39:42] 2025-07-26 23:38:37,448 | INFO     | intersect: -694634633.6818725
[2025-07-26 19:39:42] 2025-07-26 23:38:37,469 | INFO     | chi2: 5.1508419657181825
[2025-07-26 19:39:42] 2025-07-26 23:38:37,469 | INFO     | current chi2=5.1508419657181825 (change=32.72708446890141 %)
[2025-07-26 19:39:42] 2025-07-26 23:38:37,482 | INFO     | sum of square deviations: 804340571232.9641
[2025-07-26 19:39:42] 2025-07-26 23:38:37,544 | INFO     | monitor loop #2521: job 0:6741891303 is in state 'finished'
[2025-07-26 19:39:42] 2025-07-26 23:38:37,571 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-26 19:39:42] 2025-07-26 23:38:37,790 | INFO     | sum of deviations: 154918594175.02994
[2025-07-26 19:39:42] 2025-07-26 23:38:37,791 | INFO     | mean x: 1753531113.3282387
[2025-07-26 19:39:42] 2025-07-26 23:38:37,791 | INFO     | mean y: 2132011.909024745
[2025-07-26 19:39:42] 2025-07-26 23:38:37,791 | INFO     | -- intersect: -335603749.07909715
[2025-07-26 19:39:42] 2025-07-26 23:38:37,792 | INFO     | intersect: -335603749.07909715
[2025-07-26 19:39:42] 2025-07-26 23:38:37,813 | INFO     | chi2: 4.456548550699751
[2025-07-26 19:39:42] 2025-07-26 23:38:37,814 | INFO     | current chi2=4.456548550699751 (change=13.479221836727925 %)
[2025-07-26 19:39:42] 2025-07-26 23:38:37,814 | INFO     | left removable region: 20
[2025-07-26 19:39:42] 2025-07-26 23:38:37,823 | INFO     | sum of square deviations: 768021564414.437
[2025-07-26 19:39:42] 2025-07-26 23:38:38,128 | INFO     | sum of deviations: 291820549149.0835
[2025-07-26 19:39:42] 2025-07-26 23:38:38,137 | INFO     | mean x: 1753531082.8521802
[2025-07-26 19:39:42] 2025-07-26 23:38:38,137 | INFO     | mean y: 2140645.3954175906
[2025-07-26 19:39:42] 2025-07-26 23:38:38,138 | INFO     | -- intersect: -664138046.8416401
[2025-07-26 19:39:42] 2025-07-26 23:38:38,138 | INFO     | intersect: -664138046.8416401
[2025-07-26 19:39:42] 2025-07-26 23:38:38,150 | INFO     | chi2: 1.1194820511451729
[2025-07-26 19:39:42] 2025-07-26 23:38:38,151 | INFO     | -- intersect: -664138046.8416401
[2025-07-26 19:39:42] 2025-07-26 23:38:38,152 | INFO     | current memory leak: 0.38 B/s (using 1353 data points, chi2=1.12)
[2025-07-26 19:39:42] 2025-07-26 23:38:38,163 | INFO     | could have reported an average CPU frequency of 999 MHz (48 samples)
[2025-07-26 19:39:42] 2025-07-26 23:38:38,164 | INFO     | ..............................
[2025-07-26 19:39:42] 2025-07-26 23:38:38,164 | INFO     | . Timing measurements:
[2025-07-26 19:39:42] 2025-07-26 23:38:38,164 | INFO     | . get job = 0 s
[2025-07-26 19:39:42] 2025-07-26 23:38:38,164 | INFO     | . initial setup = 5 s
[2025-07-26 19:39:42] 2025-07-26 23:38:38,173 | INFO     | . payload setup = 43 s
[2025-07-26 19:39:42] 2025-07-26 23:38:38,173 | INFO     | . stage-in = 0 s
[2025-07-26 19:39:42] 2025-07-26 23:38:38,174 | INFO     | . payload execution = 84439 s
[2025-07-26 19:39:42] 2025-07-26 23:38:38,174 | INFO     | . stage-out = 15 s
[2025-07-26 19:39:42] 2025-07-26 23:38:38,174 | INFO     | . log creation = 1 s
[2025-07-26 19:39:42] 2025-07-26 23:38:38,174 | INFO     | ..............................
[2025-07-26 19:39:42] 2025-07-26 23:38:40,106 | INFO     | 
[2025-07-26 19:39:42] 2025-07-26 23:38:40,106 | INFO     | job summary report
[2025-07-26 19:39:42] 2025-07-26 23:38:40,106 | INFO     | --------------------------------------------------
[2025-07-26 19:39:42] 2025-07-26 23:38:40,107 | INFO     | PanDA job id: 6741891303
[2025-07-26 19:39:42] 2025-07-26 23:38:40,107 | INFO     | task id: 45697490
[2025-07-26 19:39:42] 2025-07-26 23:38:40,107 | INFO     | errors: (none)
[2025-07-26 19:39:42] 2025-07-26 23:38:40,107 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-26 19:39:42] 2025-07-26 23:38:40,108 | INFO     | pilot state: finished 
[2025-07-26 19:39:42] 2025-07-26 23:38:40,108 | INFO     | transexitcode: 0
[2025-07-26 19:39:42] 2025-07-26 23:38:40,108 | INFO     | exeerrorcode: 0
[2025-07-26 19:39:42] 2025-07-26 23:38:40,108 | INFO     | exeerrordiag: 
[2025-07-26 19:39:42] 2025-07-26 23:38:40,108 | INFO     | exitcode: 0
[2025-07-26 19:39:42] 2025-07-26 23:38:40,108 | INFO     | exitmsg: OK
[2025-07-26 19:39:42] 2025-07-26 23:38:40,109 | INFO     | cpuconsumptiontime: 180957 s
[2025-07-26 19:39:42] 2025-07-26 23:38:40,109 | INFO     | nevents: 400
[2025-07-26 19:39:42] 2025-07-26 23:38:40,109 | INFO     | neventsw: 0
[2025-07-26 19:39:42] 2025-07-26 23:38:40,109 | INFO     | pid: 3768754
[2025-07-26 19:39:42] 2025-07-26 23:38:40,138 | INFO     | pgrp: 3768754
[2025-07-26 19:39:42] 2025-07-26 23:38:40,138 | INFO     | corecount: 8
[2025-07-26 19:39:42] 2025-07-26 23:38:40,139 | INFO     | event service: False
[2025-07-26 19:39:42] 2025-07-26 23:38:40,139 | INFO     | sizes: {0: 2396636, 1: 2397237, 2: 2397349, 3: 2397520, 4: 2397548, 15: 2397576, 27: 2397732, 35: 2398022, 39: 2398050, 84490: 2453787, 84492: 2453786, 84508: 2463
[2025-07-26 19:39:42] 2025-07-26 23:38:40,139 | INFO     | --------------------------------------------------
[2025-07-26 19:39:42] 2025-07-26 23:38:40,139 | INFO     | 
[2025-07-26 19:39:42] 2025-07-26 23:38:40,140 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-07-26 19:39:42] 2025-07-26 23:38:40,347 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-26 19:39:42] 2025-07-26 23:38:40,349 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-26 19:39:42] 2025-07-26 23:38:40,349 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-26 19:39:42] 2025-07-26 23:38:40,350 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-26 19:39:42] 2025-07-26 23:38:40,350 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-26 19:39:42] 2025-07-26 23:38:40,350 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-26 19:39:42] 2025-07-26 23:38:40,351 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-26 19:39:42] 2025-07-26 23:38:40,351 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-26 19:39:42] 2025-07-26 23:38:40,351 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-26 19:39:42] 2025-07-26 23:38:40,352 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-26 19:39:42] 2025-07-26 23:38:40,352 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-26 19:39:42] 2025-07-26 23:38:40,352 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-26 19:39:42] 2025-07-26 23:38:40,352 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-26 19:39:42] 2025-07-26 23:38:40,353 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-26 19:39:42] 2025-07-26 23:38:40,353 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-26 19:39:42] 2025-07-26 23:38:40,353 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-26 19:39:42] 2025-07-26 23:38:40,354 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-26 19:39:42] 2025-07-26 23:38:40,354 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-26 19:39:42] 2025-07-26 23:38:40,354 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-26 19:39:42] 2025-07-26 23:38:40,354 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-26 19:39:42] 2025-07-26 23:38:40,355 | INFO     | job 6741891303 has completed (purged errors)
[2025-07-26 19:39:42] 2025-07-26 23:38:40,356 | INFO     | overall cleanup function is called
[2025-07-26 19:39:42] 2025-07-26 23:38:41,370 | INFO     | --- collectZombieJob: --- 10, [3768754]
[2025-07-26 19:39:42] 2025-07-26 23:38:41,370 | INFO     | zombie collector waiting for pid 3768754
[2025-07-26 19:39:42] 2025-07-26 23:38:41,371 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-26 19:39:42] 2025-07-26 23:38:41,371 | INFO     | collected zombie processes
[2025-07-26 19:39:42] 2025-07-26 23:38:41,371 | INFO     | will attempt to kill all subprocesses of pid=3768754
[2025-07-26 19:39:42] 2025-07-26 23:38:47,049 | INFO     | process IDs to be killed: [3768754] (in reverse order)
[2025-07-26 19:39:42] 2025-07-26 23:38:47,579 | WARNING  | found no corresponding commands to process id(s)
[2025-07-26 19:39:42] 2025-07-26 23:38:47,580 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-26 19:39:42] 2025-07-26 23:38:47,687 | INFO     | did not find any defunct processes belonging to 3768754
[2025-07-26 19:39:42] 2025-07-26 23:38:47,863 | INFO     | did not find any defunct processes belonging to 3768754
[2025-07-26 19:39:42] 2025-07-26 23:38:47,864 | INFO     | ready for new job
[2025-07-26 19:39:42] 2025-07-26 23:38:47,864 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-26 19:39:42] 2025-07-26 23:38:47,903 | INFO     | ***************************************
[2025-07-26 19:39:42] 2025-07-26 23:38:47,904 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-26 19:39:42] 2025-07-26 23:38:47,904 | INFO     | ***************************************
[2025-07-26 19:39:42] 2025-07-26 23:38:47,904 | INFO     | 
[2025-07-26 19:39:42] 2025-07-26 23:38:47,982 | INFO     | architecture information:
[2025-07-26 19:39:42] 2025-07-26 23:38:47,998 | INFO     | executing command: cat /etc/os-release
[2025-07-26 19:39:42] 2025-07-26 23:38:48,164 | INFO     | cat /etc/os-release:
[2025-07-26 19:39:42] NAME="CentOS Linux"
[2025-07-26 19:39:42] VERSION="7 (Core)"
[2025-07-26 19:39:42] ID="centos"
[2025-07-26 19:39:42] ID_LIKE="rhel fedora"
[2025-07-26 19:39:42] VERSION_ID="7"
[2025-07-26 19:39:42] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-26 19:39:42] ANSI_COLOR="0;31"
[2025-07-26 19:39:42] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-26 19:39:42] HOME_URL="https://www.centos.org/"
[2025-07-26 19:39:42] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-26 19:39:42] 
[2025-07-26 19:39:42] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-26 19:39:42] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-26 19:39:42] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-26 19:39:42] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-26 19:39:42] 
[2025-07-26 19:39:42] 2025-07-26 23:38:48,164 | INFO     | ***************************************
[2025-07-26 19:39:42] 2025-07-26 23:38:48,668 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-07-26 19:39:42] 2025-07-26 23:38:48,884 | INFO     | sufficient remaining disk space (75366400000 B)
[2025-07-26 19:39:42] 2025-07-26 23:38:48,885 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-26 19:39:42] 2025-07-26 23:38:48,885 | INFO     | current server update state: UPDATING_FINAL
[2025-07-26 19:39:42] 2025-07-26 23:38:48,886 | INFO     | update_server=False
[2025-07-26 19:39:42] 2025-07-26 23:38:48,886 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-26 19:39:42] 2025-07-26 23:38:48,898 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-26 19:39:42] 2025-07-26 23:38:48,898 | INFO     | aborting loop
[2025-07-26 19:39:42] 2025-07-26 23:38:48,898 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-26 19:39:42] 2025-07-26 23:38:48,899 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-26 19:39:42] 2025-07-26 23:38:49,023 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-26 19:39:42] 2025-07-26 23:38:49,534 | INFO     | all job control threads have been joined
[2025-07-26 19:39:42] 2025-07-26 23:38:49,575 | INFO     | all payload control threads have been joined
[2025-07-26 19:39:42] 2025-07-26 23:38:49,892 | INFO     | [job] retrieve thread has finished
[2025-07-26 19:39:42] 2025-07-26 23:38:49,907 | INFO     | [job] job monitor thread has finished
[2025-07-26 19:39:42] 2025-07-26 23:38:49,908 | INFO     | [job] queue monitor thread has finished
[2025-07-26 19:39:42] 2025-07-26 23:38:49,911 | INFO     | [payload] validate_post thread has finished
[2025-07-26 19:39:42] 2025-07-26 23:38:49,979 | INFO     | all data control threads have been joined
[2025-07-26 19:39:42] 2025-07-26 23:38:50,060 | INFO     | [payload] validate_pre thread has finished
[2025-07-26 19:39:42] 2025-07-26 23:38:50,540 | INFO     | [job] control thread has finished
[2025-07-26 19:39:42] 2025-07-26 23:38:50,581 | INFO     | [payload] control thread has finished
[2025-07-26 19:39:42] 2025-07-26 23:38:50,985 | INFO     | [data] control thread has finished
[2025-07-26 19:39:42] 2025-07-26 23:38:51,031 | INFO     | [data] copytool_out thread has finished
[2025-07-26 19:39:42] 2025-07-26 23:38:51,245 | INFO     | [job] create_data_payload thread has finished
[2025-07-26 19:39:42] 2025-07-26 23:38:51,254 | INFO     | [payload] execute_payloads thread has finished
[2025-07-26 19:39:42] 2025-07-26 23:38:51,353 | INFO     | [job] validate thread has finished
[2025-07-26 19:39:42] 2025-07-26 23:38:51,365 | INFO     | [data] copytool_in thread has finished
[2025-07-26 19:39:42] 2025-07-26 23:38:51,379 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-26 19:39:42] 2025-07-26 23:38:51,448 | INFO     | [payload] failed_post thread has finished
[2025-07-26 19:39:42] 2025-07-26 23:38:52,910 | INFO     | [data] queue_monitor thread has finished
[2025-07-26 19:39:42] 2025-07-26 23:38:54,956 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140678418429760)>', '<ExcThread(monitor, started 140677476243200)>']
[2025-07-26 19:39:42] 2025-07-26 23:38:59,989 | INFO     | all workflow threads have been joined
[2025-07-26 19:39:42] 2025-07-26 23:38:59,997 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-26 19:39:42] 2025-07-26 23:38:59,998 | INFO     | traces error code: 0
[2025-07-26 19:39:42] 2025-07-26 23:38:59,999 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-26 19:39:42] 2025-07-26 23:39:20,440 | INFO     | PID=3756561 has CPU usage=8.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-26 19:39:42] 2025-07-26 23:39:20,444 | INFO     | .. there are 39 such processes running
[2025-07-26 19:39:42] 2025-07-26 23:39:20,444 | INFO     | found 0 job(s) in 20 queues
[2025-07-26 19:39:42] 2025-07-26 23:39:20,444 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-26 19:39:42] 2025-07-26 23:39:20,445 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-26 19:39:42] 2025-07-26 23:39:20,445 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-26 19:39:42] 2025-07-26 23:39:20,445 | INFO     | [monitor] control thread has ended
[2025-07-26 19:39:42] 2025-07-26 23:39:21,081 [wrapper] ==== pilot stdout END ====
[2025-07-26 19:39:42] 2025-07-26 23:39:21,096 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-26 19:39:42] 2025-07-26 23:39:21,118 [wrapper] pilotpid: 3756561
[2025-07-26 19:39:42] 2025-07-26 23:39:21,153 [wrapper] Pilot exit status: 0
[2025-07-26 19:39:42] 2025-07-26 23:39:21,464 [wrapper] pandaids: 6741891303
[2025-07-26 19:39:42] 2025-07-26 23:39:21,894 [wrapper] cleanup supervisor_pilot 3396129 3756562
[2025-07-26 19:39:42] 2025-07-26 23:39:21,902 [wrapper] Test setup, not cleaning
[2025-07-26 19:39:42] 2025-07-26 23:39:21,908 [wrapper] apfmon messages muted
[2025-07-26 19:39:42] 2025-07-26 23:39:21,914 [wrapper] ==== wrapper stdout END ====
[2025-07-26 19:39:42] 2025-07-26 23:39:21,919 [wrapper] ==== wrapper stderr END ====
[2025-07-26 19:39:42]  *** Error codes and diagnostics ***
[2025-07-26 19:39:42]     "exeErrorCode": 0,
[2025-07-26 19:39:42]     "exeErrorDiag": "",
[2025-07-26 19:39:42]     "pilotErrorCode": 0,
[2025-07-26 19:39:42]     "pilotErrorDiag": "",
[2025-07-26 19:39:42]  *** Listing of results directory ***
[2025-07-26 19:39:42] total 652604
[2025-07-26 19:39:42] -rw-r--r--. 1 boincer umatlas    530466 Jul 23 05:39 pilot3.tar.gz
[2025-07-26 19:39:42] -rwx------. 1 boincer umatlas     36292 Jul 23 05:45 runpilot2-wrapper.sh
[2025-07-26 19:39:42] -rw-r--r--. 1 boincer umatlas      5112 Jul 23 05:45 queuedata.json
[2025-07-26 19:39:42] -rw-r--r--. 1 boincer umatlas       100 Jul 25 20:07 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-26 19:39:42] -rwxr-xr-x. 1 boincer umatlas      7986 Jul 25 20:07 run_atlas
[2025-07-26 19:39:42] -rw-r--r--. 1 boincer umatlas       105 Jul 25 20:07 job.xml
[2025-07-26 19:39:42] -rw-r--r--. 2 boincer umatlas 344897497 Jul 25 20:07 EVNT.45697488._000222.pool.root.1
[2025-07-26 19:39:42] -rw-r--r--. 2 boincer umatlas     15095 Jul 25 20:07 start_atlas.sh
[2025-07-26 19:39:42] drwxrwx--x. 2 boincer umatlas      4096 Jul 25 20:07 shared
[2025-07-26 19:39:42] -rw-r--r--. 2 boincer umatlas    542898 Jul 25 20:07 input.tar.gz
[2025-07-26 19:39:42] -rw-r--r--. 1 boincer umatlas         0 Jul 25 20:07 boinc_lockfile
[2025-07-26 19:39:42] -rw-r--r--. 1 boincer umatlas      2589 Jul 25 20:07 pandaJob.out
[2025-07-26 19:39:42] -rw-------. 1 boincer umatlas    980001 Jul 25 20:08 agis_schedconf.cvmfs.json
[2025-07-26 19:39:42] drwx------. 4 boincer umatlas      4096 Jul 25 20:08 pilot3
[2025-07-26 19:39:42] -rw-------. 1 boincer umatlas 309475533 Jul 26 19:33 HITS.45697490._005012.pool.root.1
[2025-07-26 19:39:42] -rw-r--r--. 1 boincer umatlas       533 Jul 26 19:33 boinc_task_state.xml
[2025-07-26 19:39:42] -rw-------. 1 boincer umatlas      1053 Jul 26 19:37 memory_monitor_summary.json
[2025-07-26 19:39:42] -rw-------. 1 boincer umatlas   1593052 Jul 26 19:37 agis_ddmendpoints.agis.ALL.json
[2025-07-26 19:39:42] -rw-------. 1 boincer umatlas    824777 Jul 26 19:37 log.45697490._005012.job.log.tgz.1
[2025-07-26 19:39:42] -rw-------. 1 boincer umatlas        96 Jul 26 19:38 pilot_heartbeat.json
[2025-07-26 19:39:42] -rw-------. 1 boincer umatlas      7853 Jul 26 19:38 heartbeat.json
[2025-07-26 19:39:42] -rw-r--r--. 1 boincer umatlas      6857 Jul 26 19:39 init_data.xml
[2025-07-26 19:39:42] -rw-------. 1 boincer umatlas       823 Jul 26 19:39 pilotlog.txt
[2025-07-26 19:39:42] -rw-------. 1 boincer umatlas   4183347 Jul 26 19:39 log.45697490._005012.job.log.1
[2025-07-26 19:39:42] -rw-------. 1 boincer umatlas       357 Jul 26 19:39 output.list
[2025-07-26 19:39:42] -rw-r--r--. 1 boincer umatlas       620 Jul 26 19:39 runtime_log
[2025-07-26 19:39:42] -rw-------. 1 boincer umatlas   5027840 Jul 26 19:39 result.tar.gz
[2025-07-26 19:39:42] -rw-------. 1 boincer umatlas       668 Jul 26 19:39 TzKODmMDly7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmQNLLDmZEGOfn.diag
[2025-07-26 19:39:42] -rw-r--r--. 1 boincer umatlas      8671 Jul 26 19:39 runtime_log.err
[2025-07-26 19:39:42] -rw-r--r--. 1 boincer umatlas        29 Jul 26 19:39 wrapper_checkpoint.txt
[2025-07-26 19:39:42] -rw-r--r--. 1 boincer umatlas      8192 Jul 26 19:39 boinc_mmap_file
[2025-07-26 19:39:42] -rw-r--r--. 1 boincer umatlas     21092 Jul 26 19:39 stderr.txt
[2025-07-26 19:39:42] HITS file was successfully produced:
[2025-07-26 19:39:42] -rw-------. 1 boincer umatlas 309475533 Jul 26 19:33 shared/HITS.pool.root.1
[2025-07-26 19:39:43]  *** Contents of shared directory: ***
[2025-07-26 19:39:43] total 644504
[2025-07-26 19:39:43] -rw-r--r--. 2 boincer umatlas 344897497 Jul 25 20:07 ATLAS.root_0
[2025-07-26 19:39:43] -rw-r--r--. 2 boincer umatlas     15095 Jul 25 20:07 start_atlas.sh
[2025-07-26 19:39:43] -rw-r--r--. 2 boincer umatlas    542898 Jul 25 20:07 input.tar.gz
[2025-07-26 19:39:43] -rw-------. 1 boincer umatlas 309475533 Jul 26 19:33 HITS.pool.root.1
[2025-07-26 19:39:43] -rw-------. 1 boincer umatlas   5027840 Jul 26 19:39 result.tar.gz
19:39:44 (3748690): run_atlas exited; CPU time 188508.332932
19:39:44 (3748690): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN