Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
20:02:12 (3702254): wrapper (7.7.26015): starting
20:02:12 (3702254): wrapper: running run_atlas (--nthreads 8)
[2025-07-25 20:02:12] Arguments: --nthreads 8
[2025-07-25 20:02:12] Threads: 8
[2025-07-25 20:02:12] Checking for CVMFS
[2025-07-25 20:02:13] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-25 20:02:14] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-25 20:02:14] Running cvmfs_config stat atlas.cern.ch
[2025-07-25 20:02:16] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-25 20:02:16] 2.12.6.0 3074763 97666 742856 148757 2 161 19436795 32935936 27977 16776704 2 190922831 99.661 221805914 7092 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-07-25 20:02:16] CVMFS is ok
[2025-07-25 20:02:16] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-25 20:02:16] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-25 20:02:16] Further information can be found at the LHC@home message board.
[2025-07-25 20:02:16] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-25 20:02:16] Checking for apptainer binary...
[2025-07-25 20:02:16] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-25 20:02:16] Running /usr/bin/apptainer --version
[2025-07-25 20:02:16] apptainer version 1.4.1-1.el9
[2025-07-25 20:02:16] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-25 20:02:17] c6-12-25-1.aglt2.org
[2025-07-25 20:02:17] apptainer works
[2025-07-25 20:02:17] Set ATHENA_PROC_NUMBER=8
[2025-07-25 20:02:17] Set ATHENA_CORE_NUMBER=8
[2025-07-25 20:02:17] Starting ATLAS job with PandaID=6741711059
[2025-07-25 20:02:17] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-26 18:40:43]  *** The last 200 lines of the pilot log: ***
[2025-07-26 18:40:43] 2025-07-26 22:39:48,434 | INFO     | monitor loop #2101: job 0:6741711059 is in state 'finished'
[2025-07-26 18:40:43] 2025-07-26 22:39:48,469 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-26 18:40:43] 2025-07-26 22:39:48,581 | INFO     | fitting pss+swap vs Time
[2025-07-26 18:40:43] 2025-07-26 22:39:48,629 | INFO     | sum of square deviations: 731138813021.8403
[2025-07-26 18:40:43] 2025-07-26 22:39:49,335 | INFO     | sum of deviations: 139301919980.78058
[2025-07-26 18:40:43] 2025-07-26 22:39:49,336 | INFO     | mean x: 1753528898.5905335
[2025-07-26 18:40:43] 2025-07-26 22:39:49,337 | INFO     | mean y: 2117778.3794139745
[2025-07-26 18:40:43] 2025-07-26 22:39:49,337 | INFO     | -- intersect: -331977386.5399022
[2025-07-26 18:40:43] 2025-07-26 22:39:49,337 | INFO     | intersect: -331977386.5399022
[2025-07-26 18:40:43] 2025-07-26 22:39:49,364 | INFO     | chi2: 8.181868458216053
[2025-07-26 18:40:43] 2025-07-26 22:39:49,415 | INFO     | sum of square deviations: 722930402451.6453
[2025-07-26 18:40:43] 2025-07-26 22:39:50,117 | INFO     | sum of deviations: 498320612956.9788
[2025-07-26 18:40:43] 2025-07-26 22:39:50,118 | INFO     | mean x: 1753528746.096531
[2025-07-26 18:40:43] 2025-07-26 22:39:50,119 | INFO     | mean y: 2124448.73453997
[2025-07-26 18:40:43] 2025-07-26 22:39:50,119 | INFO     | -- intersect: -1206594283.5654936
[2025-07-26 18:40:43] 2025-07-26 22:39:50,119 | INFO     | intersect: -1206594283.5654936
[2025-07-26 18:40:43] 2025-07-26 22:39:50,168 | INFO     | chi2: 4.652368760904663
[2025-07-26 18:40:43] 2025-07-26 22:39:50,168 | INFO     | current chi2=4.652368760904663 (change=43.13806455501181 %)
[2025-07-26 18:40:43] 2025-07-26 22:39:50,194 | INFO     | sum of square deviations: 714783263037.3573
[2025-07-26 18:40:43] 2025-07-26 22:39:50,819 | INFO     | sum of deviations: 515779327612.9734
[2025-07-26 18:40:43] 2025-07-26 22:39:50,842 | INFO     | mean x: 1753528593.5987887
[2025-07-26 18:40:43] 2025-07-26 22:39:50,843 | INFO     | mean y: 2124775.482967449
[2025-07-26 18:40:43] 2025-07-26 22:39:50,844 | INFO     | -- intersect: -1263201157.182634
[2025-07-26 18:40:43] 2025-07-26 22:39:50,844 | INFO     | intersect: -1263201157.182634
[2025-07-26 18:40:43] 2025-07-26 22:39:50,871 | INFO     | chi2: 4.6384298702013735
[2025-07-26 18:40:43] 2025-07-26 22:39:50,872 | INFO     | current chi2=4.6384298702013735 (change=0.2996084665605679 %)
[2025-07-26 18:40:43] 2025-07-26 22:39:50,872 | INFO     | right removable region: 1320
[2025-07-26 18:40:43] 2025-07-26 22:39:50,921 | INFO     | sum of square deviations: 722929111081.6449
[2025-07-26 18:40:43] 2025-07-26 22:39:51,051 | INFO     | monitor loop #2102: job 0:6741711059 is in state 'finished'
[2025-07-26 18:40:43] 2025-07-26 22:39:51,051 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-26 18:40:43] 2025-07-26 22:39:51,555 | INFO     | sum of deviations: -123129192331.25922
[2025-07-26 18:40:43] 2025-07-26 22:39:51,556 | INFO     | mean x: 1753529051.096531
[2025-07-26 18:40:43] 2025-07-26 22:39:51,557 | INFO     | mean y: 2122649.595776772
[2025-07-26 18:40:43] 2025-07-26 22:39:51,557 | INFO     | -- intersect: 300783489.8929261
[2025-07-26 18:40:43] 2025-07-26 22:39:51,557 | INFO     | intersect: 300783489.8929261
[2025-07-26 18:40:43] 2025-07-26 22:39:51,585 | INFO     | chi2: 6.0447726643664526
[2025-07-26 18:40:43] 2025-07-26 22:39:51,607 | INFO     | current chi2=6.0447726643664526 (change=26.119899198618572 %)
[2025-07-26 18:40:43] 2025-07-26 22:39:51,635 | INFO     | sum of square deviations: 714781084716.3514
[2025-07-26 18:40:43] 2025-07-26 22:39:52,168 | INFO     | sum of deviations: -278828275938.3452
[2025-07-26 18:40:43] 2025-07-26 22:39:52,169 | INFO     | mean x: 1753529203.6025739
[2025-07-26 18:40:43] 2025-07-26 22:39:52,169 | INFO     | mean y: 2125563.925056775
[2025-07-26 18:40:43] 2025-07-26 22:39:52,169 | INFO     | -- intersect: 686158109.1372318
[2025-07-26 18:40:43] 2025-07-26 22:39:52,170 | INFO     | intersect: 686158109.1372318
[2025-07-26 18:40:43] 2025-07-26 22:39:52,213 | INFO     | chi2: 5.377983327426412
[2025-07-26 18:40:43] 2025-07-26 22:39:52,214 | INFO     | current chi2=5.377983327426412 (change=11.030842249382202 %)
[2025-07-26 18:40:43] 2025-07-26 22:39:52,214 | INFO     | left removable region: 20
[2025-07-26 18:40:43] 2025-07-26 22:39:52,240 | INFO     | sum of square deviations: 681230304372.0391
[2025-07-26 18:40:43] 2025-07-26 22:39:52,639 | INFO     | sum of deviations: -79847058248.6096
[2025-07-26 18:40:43] 2025-07-26 22:39:52,640 | INFO     | mean x: 1753529173.1207693
[2025-07-26 18:40:43] 2025-07-26 22:39:52,640 | INFO     | mean y: 2136118.73
[2025-07-26 18:40:43] 2025-07-26 22:39:52,640 | INFO     | -- intersect: 207667412.81398222
[2025-07-26 18:40:43] 2025-07-26 22:39:52,653 | INFO     | intersect: 207667412.81398222
[2025-07-26 18:40:43] 2025-07-26 22:39:52,666 | INFO     | chi2: 1.3387826265894764
[2025-07-26 18:40:43] 2025-07-26 22:39:52,667 | INFO     | -- intersect: 207667412.81398222
[2025-07-26 18:40:43] 2025-07-26 22:39:52,668 | INFO     | current memory leak: -0.12 B/s (using 1300 data points, chi2=1.34)
[2025-07-26 18:40:43] 2025-07-26 22:39:52,677 | INFO     | could have reported an average CPU frequency of 1000 MHz (47 samples)
[2025-07-26 18:40:43] 2025-07-26 22:39:52,684 | INFO     | ..............................
[2025-07-26 18:40:43] 2025-07-26 22:39:52,684 | INFO     | . Timing measurements:
[2025-07-26 18:40:43] 2025-07-26 22:39:52,684 | INFO     | . get job = 0 s
[2025-07-26 18:40:43] 2025-07-26 22:39:52,685 | INFO     | . initial setup = 4 s
[2025-07-26 18:40:43] 2025-07-26 22:39:52,685 | INFO     | . payload setup = 41 s
[2025-07-26 18:40:43] 2025-07-26 22:39:52,685 | INFO     | . stage-in = 0 s
[2025-07-26 18:40:43] 2025-07-26 22:39:52,685 | INFO     | . payload execution = 81178 s
[2025-07-26 18:40:43] 2025-07-26 22:39:52,685 | INFO     | . stage-out = 20 s
[2025-07-26 18:40:43] 2025-07-26 22:39:52,685 | INFO     | . log creation = 4 s
[2025-07-26 18:40:43] 2025-07-26 22:39:52,686 | INFO     | ..............................
[2025-07-26 18:40:43] 2025-07-26 22:39:53,868 | INFO     | 
[2025-07-26 18:40:43] 2025-07-26 22:39:53,875 | INFO     | job summary report
[2025-07-26 18:40:43] 2025-07-26 22:39:53,875 | INFO     | --------------------------------------------------
[2025-07-26 18:40:43] 2025-07-26 22:39:53,875 | INFO     | PanDA job id: 6741711059
[2025-07-26 18:40:43] 2025-07-26 22:39:53,876 | INFO     | task id: 45697472
[2025-07-26 18:40:43] 2025-07-26 22:39:53,876 | INFO     | errors: (none)
[2025-07-26 18:40:43] 2025-07-26 22:39:53,876 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-26 18:40:43] 2025-07-26 22:39:53,876 | INFO     | pilot state: finished 
[2025-07-26 18:40:43] 2025-07-26 22:39:53,876 | INFO     | transexitcode: 0
[2025-07-26 18:40:43] 2025-07-26 22:39:53,877 | INFO     | exeerrorcode: 0
[2025-07-26 18:40:43] 2025-07-26 22:39:53,877 | INFO     | exeerrordiag: 
[2025-07-26 18:40:43] 2025-07-26 22:39:53,877 | INFO     | exitcode: 0
[2025-07-26 18:40:43] 2025-07-26 22:39:53,877 | INFO     | exitmsg: OK
[2025-07-26 18:40:43] 2025-07-26 22:39:53,877 | INFO     | cpuconsumptiontime: 167711 s
[2025-07-26 18:40:43] 2025-07-26 22:39:53,878 | INFO     | nevents: 400
[2025-07-26 18:40:43] 2025-07-26 22:39:53,878 | INFO     | neventsw: 0
[2025-07-26 18:40:43] 2025-07-26 22:39:53,878 | INFO     | pid: 3722553
[2025-07-26 18:40:43] 2025-07-26 22:39:53,878 | INFO     | pgrp: 3722553
[2025-07-26 18:40:43] 2025-07-26 22:39:53,885 | INFO     | corecount: 8
[2025-07-26 18:40:43] 2025-07-26 22:39:53,885 | INFO     | event service: False
[2025-07-26 18:40:43] 2025-07-26 22:39:53,885 | INFO     | sizes: {0: 2396709, 1: 2397394, 3: 2397422, 4: 2397422, 6: 2397593, 7: 2397621, 19: 2397777, 31: 2397805, 38: 2398095, 42: 2398123, 81227: 2451764, 81231: 2452043,
[2025-07-26 18:40:43] 2025-07-26 22:39:53,886 | INFO     | --------------------------------------------------
[2025-07-26 18:40:43] 2025-07-26 22:39:53,886 | INFO     | 
[2025-07-26 18:40:43] 2025-07-26 22:39:53,886 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-07-26 18:40:43] 2025-07-26 22:39:54,198 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-26 18:40:43] 2025-07-26 22:39:54,199 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-26 18:40:43] 2025-07-26 22:39:54,199 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-26 18:40:43] 2025-07-26 22:39:54,200 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-26 18:40:43] 2025-07-26 22:39:54,200 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-26 18:40:43] 2025-07-26 22:39:54,200 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-26 18:40:43] 2025-07-26 22:39:54,200 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-26 18:40:43] 2025-07-26 22:39:54,200 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-26 18:40:43] 2025-07-26 22:39:54,201 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-26 18:40:43] 2025-07-26 22:39:54,201 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-26 18:40:43] 2025-07-26 22:39:54,201 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-26 18:40:43] 2025-07-26 22:39:54,201 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-26 18:40:43] 2025-07-26 22:39:54,224 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-26 18:40:43] 2025-07-26 22:39:54,224 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-26 18:40:43] 2025-07-26 22:39:54,224 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-26 18:40:43] 2025-07-26 22:39:54,225 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-26 18:40:43] 2025-07-26 22:39:54,225 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-26 18:40:43] 2025-07-26 22:39:54,225 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-26 18:40:43] 2025-07-26 22:39:54,225 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-26 18:40:43] 2025-07-26 22:39:54,226 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-26 18:40:43] 2025-07-26 22:39:54,226 | INFO     | job 6741711059 has completed (purged errors)
[2025-07-26 18:40:43] 2025-07-26 22:39:54,227 | INFO     | overall cleanup function is called
[2025-07-26 18:40:43] 2025-07-26 22:39:55,283 | INFO     | --- collectZombieJob: --- 10, [3722553]
[2025-07-26 18:40:43] 2025-07-26 22:39:55,284 | INFO     | zombie collector waiting for pid 3722553
[2025-07-26 18:40:43] 2025-07-26 22:39:55,285 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-26 18:40:43] 2025-07-26 22:39:55,285 | INFO     | collected zombie processes
[2025-07-26 18:40:43] 2025-07-26 22:39:55,285 | INFO     | will attempt to kill all subprocesses of pid=3722553
[2025-07-26 18:40:43] 2025-07-26 22:40:01,274 | INFO     | process IDs to be killed: [3722553] (in reverse order)
[2025-07-26 18:40:43] 2025-07-26 22:40:02,516 | WARNING  | found no corresponding commands to process id(s)
[2025-07-26 18:40:43] 2025-07-26 22:40:02,517 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-26 18:40:43] 2025-07-26 22:40:02,807 | INFO     | did not find any defunct processes belonging to 3722553
[2025-07-26 18:40:43] 2025-07-26 22:40:03,055 | INFO     | did not find any defunct processes belonging to 3722553
[2025-07-26 18:40:43] 2025-07-26 22:40:03,056 | INFO     | ready for new job
[2025-07-26 18:40:43] 2025-07-26 22:40:03,056 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-26 18:40:43] 2025-07-26 22:40:03,064 | INFO     | ***************************************
[2025-07-26 18:40:43] 2025-07-26 22:40:03,064 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-26 18:40:43] 2025-07-26 22:40:03,065 | INFO     | ***************************************
[2025-07-26 18:40:43] 2025-07-26 22:40:03,065 | INFO     | 
[2025-07-26 18:40:43] 2025-07-26 22:40:03,084 | INFO     | architecture information:
[2025-07-26 18:40:43] 2025-07-26 22:40:03,094 | INFO     | executing command: cat /etc/os-release
[2025-07-26 18:40:43] 2025-07-26 22:40:03,341 | INFO     | cat /etc/os-release:
[2025-07-26 18:40:43] NAME="CentOS Linux"
[2025-07-26 18:40:43] VERSION="7 (Core)"
[2025-07-26 18:40:43] ID="centos"
[2025-07-26 18:40:43] ID_LIKE="rhel fedora"
[2025-07-26 18:40:43] VERSION_ID="7"
[2025-07-26 18:40:43] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-26 18:40:43] ANSI_COLOR="0;31"
[2025-07-26 18:40:43] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-26 18:40:43] HOME_URL="https://www.centos.org/"
[2025-07-26 18:40:43] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-26 18:40:43] 
[2025-07-26 18:40:43] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-26 18:40:43] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-26 18:40:43] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-26 18:40:43] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-26 18:40:43] 
[2025-07-26 18:40:43] 2025-07-26 22:40:03,342 | INFO     | ***************************************
[2025-07-26 18:40:43] 2025-07-26 22:40:03,846 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-07-26 18:40:43] 2025-07-26 22:40:03,964 | INFO     | sufficient remaining disk space (74741448704 B)
[2025-07-26 18:40:43] 2025-07-26 22:40:03,965 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-26 18:40:43] 2025-07-26 22:40:03,966 | INFO     | current server update state: UPDATING_FINAL
[2025-07-26 18:40:43] 2025-07-26 22:40:03,966 | INFO     | update_server=False
[2025-07-26 18:40:43] 2025-07-26 22:40:03,966 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-26 18:40:43] 2025-07-26 22:40:03,967 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-26 18:40:43] 2025-07-26 22:40:03,968 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-26 18:40:43] 2025-07-26 22:40:03,978 | INFO     | all data control threads have been joined
[2025-07-26 18:40:43] 2025-07-26 22:40:04,512 | INFO     | all job control threads have been joined
[2025-07-26 18:40:43] 2025-07-26 22:40:04,747 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-26 18:40:43] 2025-07-26 22:40:04,747 | INFO     | aborting loop
[2025-07-26 18:40:43] 2025-07-26 22:40:04,924 | INFO     | all payload control threads have been joined
[2025-07-26 18:40:43] 2025-07-26 22:40:04,973 | INFO     | [job] retrieve thread has finished
[2025-07-26 18:40:43] 2025-07-26 22:40:04,974 | INFO     | [job] queue monitor thread has finished
[2025-07-26 18:40:43] 2025-07-26 22:40:04,984 | INFO     | [data] control thread has finished
[2025-07-26 18:40:43] 2025-07-26 22:40:05,224 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-26 18:40:43] 2025-07-26 22:40:05,517 | INFO     | [data] copytool_in thread has finished
[2025-07-26 18:40:43] 2025-07-26 22:40:05,519 | INFO     | [job] control thread has finished
[2025-07-26 18:40:43] 2025-07-26 22:40:05,527 | INFO     | [job] create_data_payload thread has finished
[2025-07-26 18:40:43] 2025-07-26 22:40:05,534 | INFO     | [payload] validate_pre thread has finished
[2025-07-26 18:40:43] 2025-07-26 22:40:05,754 | INFO     | [job] job monitor thread has finished
[2025-07-26 18:40:43] 2025-07-26 22:40:05,931 | INFO     | [payload] control thread has finished
[2025-07-26 18:40:43] 2025-07-26 22:40:06,041 | INFO     | [payload] execute_payloads thread has finished
[2025-07-26 18:40:43] 2025-07-26 22:40:06,119 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-26 18:40:43] 2025-07-26 22:40:06,121 | INFO     | [job] validate thread has finished
[2025-07-26 18:40:43] 2025-07-26 22:40:06,285 | INFO     | [payload] validate_post thread has finished
[2025-07-26 18:40:43] 2025-07-26 22:40:06,375 | INFO     | [payload] failed_post thread has finished
[2025-07-26 18:40:43] 2025-07-26 22:40:07,232 | INFO     | [data] copytool_out thread has finished
[2025-07-26 18:40:43] 2025-07-26 22:40:07,978 | INFO     | [data] queue_monitor thread has finished
[2025-07-26 18:40:43] 2025-07-26 22:40:08,956 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139672137750336)>', '<ExcThread(monitor, started 139671656982272)>']
[2025-07-26 18:40:43] 2025-07-26 22:40:13,982 | INFO     | all workflow threads have been joined
[2025-07-26 18:40:43] 2025-07-26 22:40:13,983 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-26 18:40:43] 2025-07-26 22:40:13,984 | INFO     | traces error code: 0
[2025-07-26 18:40:43] 2025-07-26 22:40:13,985 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-26 18:40:43] 2025-07-26 22:40:39,455 | INFO     | PID=3707671 has CPU usage=8.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-26 18:40:43] 2025-07-26 22:40:39,470 | INFO     | .. there are 41 such processes running
[2025-07-26 18:40:43] 2025-07-26 22:40:39,492 | INFO     | found 0 job(s) in 20 queues
[2025-07-26 18:40:43] 2025-07-26 22:40:39,492 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-26 18:40:43] 2025-07-26 22:40:39,493 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-26 18:40:43] 2025-07-26 22:40:39,493 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-26 18:40:43] 2025-07-26 22:40:39,493 | INFO     | [monitor] control thread has ended
[2025-07-26 18:40:43] 2025-07-26 22:40:41,582 [wrapper] ==== pilot stdout END ====
[2025-07-26 18:40:43] 2025-07-26 22:40:41,589 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-26 18:40:43] 2025-07-26 22:40:41,594 [wrapper] pilotpid: 3707671
[2025-07-26 18:40:43] 2025-07-26 22:40:41,607 [wrapper] Pilot exit status: 0
[2025-07-26 18:40:43] 2025-07-26 22:40:41,740 [wrapper] pandaids: 6741711059
[2025-07-26 18:40:43] 2025-07-26 22:40:42,002 [wrapper] cleanup supervisor_pilot 3235792 3707672
[2025-07-26 18:40:43] 2025-07-26 22:40:42,014 [wrapper] Test setup, not cleaning
[2025-07-26 18:40:43] 2025-07-26 22:40:42,064 [wrapper] apfmon messages muted
[2025-07-26 18:40:43] 2025-07-26 22:40:42,093 [wrapper] ==== wrapper stdout END ====
[2025-07-26 18:40:43] 2025-07-26 22:40:42,134 [wrapper] ==== wrapper stderr END ====
[2025-07-26 18:40:43]  *** Error codes and diagnostics ***
[2025-07-26 18:40:43]     "exeErrorCode": 0,
[2025-07-26 18:40:43]     "exeErrorDiag": "",
[2025-07-26 18:40:43]     "pilotErrorCode": 0,
[2025-07-26 18:40:43]     "pilotErrorDiag": "",
[2025-07-26 18:40:43]  *** Listing of results directory ***
[2025-07-26 18:40:43] total 616592
[2025-07-26 18:40:43] -rw-r--r--. 1 boincer umatlas    530466 Jul 21 21:12 pilot3.tar.gz
[2025-07-26 18:40:43] -rw-r--r--. 1 boincer umatlas      5112 Jul 21 21:16 queuedata.json
[2025-07-26 18:40:43] -rwx------. 1 boincer umatlas     36292 Jul 21 21:17 runpilot2-wrapper.sh
[2025-07-26 18:40:43] -rw-r--r--. 1 boincer umatlas       100 Jul 25 20:02 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-26 18:40:43] -rwxr-xr-x. 1 boincer umatlas      7986 Jul 25 20:02 run_atlas
[2025-07-26 18:40:43] -rw-r--r--. 1 boincer umatlas       105 Jul 25 20:02 job.xml
[2025-07-26 18:40:43] -rw-r--r--. 2 boincer umatlas 336535637 Jul 25 20:02 EVNT.45697470._000008.pool.root.1
[2025-07-26 18:40:43] -rw-r--r--. 2 boincer umatlas     15095 Jul 25 20:02 start_atlas.sh
[2025-07-26 18:40:43] drwxrwx--x. 2 boincer umatlas      4096 Jul 25 20:02 shared
[2025-07-26 18:40:43] -rw-r--r--. 2 boincer umatlas    542892 Jul 25 20:02 input.tar.gz
[2025-07-26 18:40:43] -rw-r--r--. 1 boincer umatlas         0 Jul 25 20:02 boinc_lockfile
[2025-07-26 18:40:43] -rw-r--r--. 1 boincer umatlas      2608 Jul 25 20:02 pandaJob.out
[2025-07-26 18:40:43] -rw-------. 1 boincer umatlas    980001 Jul 25 20:03 agis_schedconf.cvmfs.json
[2025-07-26 18:40:43] drwx------. 4 boincer umatlas      4096 Jul 25 20:03 pilot3
[2025-07-26 18:40:43] -rw-------. 1 boincer umatlas 282066168 Jul 26 18:33 HITS.45697472._000199.pool.root.1
[2025-07-26 18:40:43] -rw-r--r--. 1 boincer umatlas       532 Jul 26 18:33 boinc_task_state.xml
[2025-07-26 18:40:43] -rw-------. 1 boincer umatlas      1053 Jul 26 18:38 memory_monitor_summary.json
[2025-07-26 18:40:43] -rw-r--r--. 1 boincer umatlas      6857 Jul 26 18:38 init_data.xml
[2025-07-26 18:40:43] -rw-------. 1 boincer umatlas   1593052 Jul 26 18:38 agis_ddmendpoints.agis.ALL.json
[2025-07-26 18:40:43] -rw-------. 1 boincer umatlas    792376 Jul 26 18:38 log.45697472._000199.job.log.tgz.1
[2025-07-26 18:40:43] -rw-------. 1 boincer umatlas      7846 Jul 26 18:39 heartbeat.json
[2025-07-26 18:40:43] -rw-r--r--. 1 boincer umatlas        29 Jul 26 18:40 wrapper_checkpoint.txt
[2025-07-26 18:40:43] -rw-r--r--. 1 boincer umatlas      8192 Jul 26 18:40 boinc_mmap_file
[2025-07-26 18:40:43] -rw-------. 1 boincer umatlas        96 Jul 26 18:40 pilot_heartbeat.json
[2025-07-26 18:40:43] -rw-------. 1 boincer umatlas       823 Jul 26 18:40 pilotlog.txt
[2025-07-26 18:40:43] -rw-------. 1 boincer umatlas   3658328 Jul 26 18:40 log.45697472._000199.job.log.1
[2025-07-26 18:40:43] -rw-------. 1 boincer umatlas       357 Jul 26 18:40 output.list
[2025-07-26 18:40:43] -rw-r--r--. 1 boincer umatlas       620 Jul 26 18:40 runtime_log
[2025-07-26 18:40:43] -rw-------. 1 boincer umatlas   4474880 Jul 26 18:40 result.tar.gz
[2025-07-26 18:40:43] -rw-r--r--. 1 boincer umatlas      8671 Jul 26 18:40 runtime_log.err
[2025-07-26 18:40:43] -rw-------. 1 boincer umatlas       667 Jul 26 18:40 iY2LDmWoGy7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmsmHLDmBcffNn.diag
[2025-07-26 18:40:43] -rw-r--r--. 1 boincer umatlas     21133 Jul 26 18:40 stderr.txt
[2025-07-26 18:40:43] HITS file was successfully produced:
[2025-07-26 18:40:43] -rw-------. 1 boincer umatlas 282066168 Jul 26 18:33 shared/HITS.pool.root.1
[2025-07-26 18:40:43]  *** Contents of shared directory: ***
[2025-07-26 18:40:43] total 609036
[2025-07-26 18:40:43] -rw-r--r--. 2 boincer umatlas 336535637 Jul 25 20:02 ATLAS.root_0
[2025-07-26 18:40:43] -rw-r--r--. 2 boincer umatlas     15095 Jul 25 20:02 start_atlas.sh
[2025-07-26 18:40:43] -rw-r--r--. 2 boincer umatlas    542892 Jul 25 20:02 input.tar.gz
[2025-07-26 18:40:43] -rw-------. 1 boincer umatlas 282066168 Jul 26 18:33 HITS.pool.root.1
[2025-07-26 18:40:43] -rw-------. 1 boincer umatlas   4474880 Jul 26 18:40 result.tar.gz
18:40:45 (3702254): run_atlas exited; CPU time 174714.241574
18:40:45 (3702254): called boinc_finish(0)

</stderr_txt>
]]>

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