Stderr output

<core_client_version>8.0.3</core_client_version>
<![CDATA[
<stderr_txt>
02:34:03 (1634125): wrapper (7.7.26015): starting
02:34:03 (1634125): wrapper: running run_atlas (--nthreads 4)
[2025-07-27 02:34:03] Arguments: --nthreads 4
[2025-07-27 02:34:03] Threads: 4
[2025-07-27 02:34:03] Checking for CVMFS
[2025-07-27 02:34:03] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-27 02:34:03] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-27 02:34:03] Running cvmfs_config stat atlas.cern.ch
[2025-07-27 02:34:03] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-27 02:34:03] 2.12.7.0 1254317 6900 68860 148794 3 188 4394421 6144001 1834 130560 0 13162584 99.991 262085 2917 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.101.42:3128 1
[2025-07-27 02:34:03] CVMFS is ok
[2025-07-27 02:34:03] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-27 02:34:03] Checking for apptainer binary...
[2025-07-27 02:34:03] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-27 02:34:03] Running /usr/bin/apptainer --version
[2025-07-27 02:34:03] apptainer version 1.4.0
[2025-07-27 02:34:03] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-27 02:34:03] Ryzen8
[2025-07-27 02:34:03] apptainer works
[2025-07-27 02:34:03] Set ATHENA_PROC_NUMBER=4
[2025-07-27 02:34:03] Set ATHENA_CORE_NUMBER=4
[2025-07-27 02:34:03] Starting ATLAS job with PandaID=6745057492
[2025-07-27 02:34:03] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc2/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-27 04:04:53]  *** The last 200 lines of the pilot log: ***
[2025-07-27 04:04:53]  protocol_id=None
[2025-07-27 04:04:53]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-07-27 04:04:53]  replicas=None
[2025-07-27 04:04:53]  scope=mc23_13p6TeV
[2025-07-27 04:04:53]  status=None
[2025-07-27 04:04:53]  status_code=0
[2025-07-27 04:04:53]  storage_token=
[2025-07-27 04:04:53]  surl=/var/lib/boinc2/slots/0/PanDA_Pilot-6745057492/log.45743349._023036.job.log.tgz.1
[2025-07-27 04:04:53]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/a7/44/log.45743349._023036.job.log.tgz.1
[2025-07-27 04:04:53]  workdir=None
[2025-07-27 04:04:53] ]
[2025-07-27 04:04:53] 2025-07-27 02:04:14,371 | INFO     | transferring file log.45743349._023036.job.log.tgz.1 from /var/lib/boinc2/slots/0/PanDA_Pilot-6745057492/log.45743349._023036.job.log.tgz.1 to /var/lib/boinc2/slot
[2025-07-27 04:04:53] 2025-07-27 02:04:14,371 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc2/slots/0/PanDA_Pilot-6745057492/log.45743349._023036.job.log.tgz.1 /var/lib/boinc2/slots/0/log.45743349._023036.j
[2025-07-27 04:04:53] 2025-07-27 02:04:14,381 | INFO     | adding to output.list: log.45743349._023036.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/a7/44/log.45743349._023036.job.log.tg
[2025-07-27 04:04:53] 2025-07-27 02:04:14,381 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-27 04:04:53] 2025-07-27 02:04:14,381 | INFO     | summary of transferred files:
[2025-07-27 04:04:53] 2025-07-27 02:04:14,381 | INFO     |  -- lfn=log.45743349._023036.job.log.tgz.1, status_code=0, status=transferred
[2025-07-27 04:04:53] 2025-07-27 02:04:14,381 | INFO     | stage-out finished correctly
[2025-07-27 04:04:53] 2025-07-27 02:04:15,741 | INFO     | monitor loop #411: job 0:6745057492 is in state 'finished'
[2025-07-27 04:04:53] 2025-07-27 02:04:15,741 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 04:04:53] 2025-07-27 02:04:17,533 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-27 04:04:53] 2025-07-27 02:04:18,244 | INFO     | monitor loop #412: job 0:6745057492 is in state 'finished'
[2025-07-27 04:04:53] 2025-07-27 02:04:18,244 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 04:04:53] 2025-07-27 02:04:19,363 | INFO     | job 6745057492 has state=finished
[2025-07-27 04:04:53] 2025-07-27 02:04:19,363 | INFO     | preparing for final server update for job 6745057492 in state='finished'
[2025-07-27 04:04:53] 2025-07-27 02:04:19,364 | INFO     | this job has now completed (state=finished)
[2025-07-27 04:04:53] 2025-07-27 02:04:19,364 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-27 04:04:53] 2025-07-27 02:04:19,364 | INFO     | log transfer has been attempted: DONE
[2025-07-27 04:04:53] 2025-07-27 02:04:19,364 | INFO     | job 6745057492 has finished - writing final server update
[2025-07-27 04:04:53] 2025-07-27 02:04:19,364 | INFO     | total number of processed events: 400 (read)
[2025-07-27 04:04:53] 2025-07-27 02:04:19,364 | INFO     | executing command: lscpu
[2025-07-27 04:04:53] 2025-07-27 02:04:19,377 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-27 04:04:53] 2025-07-27 02:04:20,747 | INFO     | monitor loop #413: job 0:6745057492 is in state 'finished'
[2025-07-27 04:04:53] 2025-07-27 02:04:20,747 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 04:04:53] 2025-07-27 02:04:21,403 | INFO     | CPU arch script returned: x86-64-v4
[2025-07-27 04:04:53] 2025-07-27 02:04:21,404 | INFO     | found 6 cores (6 cores per socket, 1 socket) HT, CPU MHz: 4332.00325
[2025-07-27 04:04:53] 2025-07-27 02:04:21,406 | INFO     | using path: /var/lib/boinc2/slots/0/PanDA_Pilot-6745057492/memory_monitor_summary.json (trf name=prmon)
[2025-07-27 04:04:53] 2025-07-27 02:04:21,406 | INFO     | extracted standard info from prmon json
[2025-07-27 04:04:53] 2025-07-27 02:04:21,406 | INFO     | extracted standard memory fields from prmon json
[2025-07-27 04:04:53] 2025-07-27 02:04:21,406 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-27 04:04:53] 2025-07-27 02:04:21,406 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-27 04:04:53] 2025-07-27 02:04:21,406 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-27 04:04:53] 2025-07-27 02:04:21,407 | INFO     | fitting pss+swap vs Time
[2025-07-27 04:04:53] 2025-07-27 02:04:21,407 | INFO     | sum of square deviations: 170944600.5
[2025-07-27 04:04:53] 2025-07-27 02:04:21,408 | INFO     | sum of deviations: -10056761980.5
[2025-07-27 04:04:53] 2025-07-27 02:04:21,408 | INFO     | mean x: 1753579241.5
[2025-07-27 04:04:53] 2025-07-27 02:04:21,408 | INFO     | mean y: 2448755.1585365855
[2025-07-27 04:04:53] 2025-07-27 02:04:21,408 | INFO     | -- intersect: 103166450391.53212
[2025-07-27 04:04:53] 2025-07-27 02:04:21,408 | INFO     | intersect: 103166450391.53212
[2025-07-27 04:04:53] 2025-07-27 02:04:21,408 | INFO     | chi2: 0.056905898438929764
[2025-07-27 04:04:53] 2025-07-27 02:04:21,408 | INFO     | -- intersect: 103166450391.53212
[2025-07-27 04:04:53] 2025-07-27 02:04:21,408 | INFO     | current memory leak: -58.83 B/s (using 82 data points, chi2=0.06)
[2025-07-27 04:04:53] 2025-07-27 02:04:21,408 | INFO     | could have reported an average CPU frequency of 4334 MHz (6 samples)
[2025-07-27 04:04:53] 2025-07-27 02:04:21,408 | INFO     | ..............................
[2025-07-27 04:04:53] 2025-07-27 02:04:21,408 | INFO     | . Timing measurements:
[2025-07-27 04:04:53] 2025-07-27 02:04:21,408 | INFO     | . get job = 0 s
[2025-07-27 04:04:53] 2025-07-27 02:04:21,408 | INFO     | . initial setup = 0 s
[2025-07-27 04:04:53] 2025-07-27 02:04:21,408 | INFO     | . payload setup = 2 s
[2025-07-27 04:04:53] 2025-07-27 02:04:21,408 | INFO     | . stage-in = 0 s
[2025-07-27 04:04:53] 2025-07-27 02:04:21,408 | INFO     | . payload execution = 5387 s
[2025-07-27 04:04:53] 2025-07-27 02:04:21,408 | INFO     | . stage-out = 0 s
[2025-07-27 04:04:53] 2025-07-27 02:04:21,408 | INFO     | . log creation = 0 s
[2025-07-27 04:04:53] 2025-07-27 02:04:21,409 | INFO     | ..............................
[2025-07-27 04:04:53] 2025-07-27 02:04:21,455 | INFO     | 
[2025-07-27 04:04:53] 2025-07-27 02:04:21,455 | INFO     | job summary report
[2025-07-27 04:04:53] 2025-07-27 02:04:21,455 | INFO     | --------------------------------------------------
[2025-07-27 04:04:53] 2025-07-27 02:04:21,455 | INFO     | PanDA job id: 6745057492
[2025-07-27 04:04:53] 2025-07-27 02:04:21,455 | INFO     | task id: 45743349
[2025-07-27 04:04:53] 2025-07-27 02:04:21,455 | INFO     | errors: (none)
[2025-07-27 04:04:53] 2025-07-27 02:04:21,455 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-27 04:04:53] 2025-07-27 02:04:21,455 | INFO     | pilot state: finished 
[2025-07-27 04:04:53] 2025-07-27 02:04:21,455 | INFO     | transexitcode: 0
[2025-07-27 04:04:53] 2025-07-27 02:04:21,455 | INFO     | exeerrorcode: 0
[2025-07-27 04:04:53] 2025-07-27 02:04:21,455 | INFO     | exeerrordiag: 
[2025-07-27 04:04:53] 2025-07-27 02:04:21,455 | INFO     | exitcode: 0
[2025-07-27 04:04:53] 2025-07-27 02:04:21,456 | INFO     | exitmsg: OK
[2025-07-27 04:04:53] 2025-07-27 02:04:21,456 | INFO     | cpuconsumptiontime: 20840 s
[2025-07-27 04:04:53] 2025-07-27 02:04:21,456 | INFO     | nevents: 400
[2025-07-27 04:04:53] 2025-07-27 02:04:21,456 | INFO     | neventsw: 0
[2025-07-27 04:04:53] 2025-07-27 02:04:21,456 | INFO     | pid: 1644241
[2025-07-27 04:04:53] 2025-07-27 02:04:21,456 | INFO     | pgrp: 1644241
[2025-07-27 04:04:53] 2025-07-27 02:04:21,456 | INFO     | corecount: 4
[2025-07-27 04:04:53] 2025-07-27 02:04:21,456 | INFO     | event service: False
[2025-07-27 04:04:53] 2025-07-27 02:04:21,456 | INFO     | sizes: {0: 2397423, 2: 2397685, 11: 2397713, 5394: 2433387, 5398: 2433387, 5401: 2433581}
[2025-07-27 04:04:53] 2025-07-27 02:04:21,456 | INFO     | --------------------------------------------------
[2025-07-27 04:04:53] 2025-07-27 02:04:21,456 | INFO     | 
[2025-07-27 04:04:53] 2025-07-27 02:04:21,456 | INFO     | executing command: ls -lF /var/lib/boinc2/slots/0
[2025-07-27 04:04:53] 2025-07-27 02:04:21,466 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-27 04:04:53] 2025-07-27 02:04:21,467 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-27 04:04:53] 2025-07-27 02:04:21,467 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-27 04:04:53] 2025-07-27 02:04:21,467 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-27 04:04:53] 2025-07-27 02:04:21,467 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-27 04:04:53] 2025-07-27 02:04:21,467 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-27 04:04:53] 2025-07-27 02:04:21,467 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-27 04:04:53] 2025-07-27 02:04:21,467 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-27 04:04:53] 2025-07-27 02:04:21,467 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-27 04:04:53] 2025-07-27 02:04:21,467 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-27 04:04:53] 2025-07-27 02:04:21,467 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-27 04:04:53] 2025-07-27 02:04:21,467 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-27 04:04:53] 2025-07-27 02:04:21,467 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-27 04:04:53] 2025-07-27 02:04:21,467 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-27 04:04:53] 2025-07-27 02:04:21,467 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-27 04:04:53] 2025-07-27 02:04:21,467 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-27 04:04:53] 2025-07-27 02:04:21,467 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-27 04:04:53] 2025-07-27 02:04:21,467 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-27 04:04:53] 2025-07-27 02:04:21,467 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-27 04:04:53] 2025-07-27 02:04:21,467 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-27 04:04:53] 2025-07-27 02:04:21,467 | INFO     | job 6745057492 has completed (purged errors)
[2025-07-27 04:04:53] 2025-07-27 02:04:21,467 | INFO     | overall cleanup function is called
[2025-07-27 04:04:53] 2025-07-27 02:04:22,473 | INFO     | --- collectZombieJob: --- 10, [1644241]
[2025-07-27 04:04:53] 2025-07-27 02:04:22,473 | INFO     | zombie collector waiting for pid 1644241
[2025-07-27 04:04:53] 2025-07-27 02:04:22,473 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-27 04:04:53] 2025-07-27 02:04:22,473 | INFO     | collected zombie processes
[2025-07-27 04:04:53] 2025-07-27 02:04:22,473 | INFO     | will attempt to kill all subprocesses of pid=1644241
[2025-07-27 04:04:53] 2025-07-27 02:04:22,521 | INFO     | process IDs to be killed: [1644241] (in reverse order)
[2025-07-27 04:04:53] 2025-07-27 02:04:22,546 | WARNING  | found no corresponding commands to process id(s)
[2025-07-27 04:04:53] 2025-07-27 02:04:22,546 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-27 04:04:53] 2025-07-27 02:04:22,548 | INFO     | did not find any defunct processes belonging to 1644241
[2025-07-27 04:04:53] 2025-07-27 02:04:22,549 | INFO     | did not find any defunct processes belonging to 1644241
[2025-07-27 04:04:53] 2025-07-27 02:04:22,549 | INFO     | ready for new job
[2025-07-27 04:04:53] 2025-07-27 02:04:22,549 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-27 04:04:53] 2025-07-27 02:04:22,550 | INFO     | ***************************************
[2025-07-27 04:04:53] 2025-07-27 02:04:22,550 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-27 04:04:53] 2025-07-27 02:04:22,550 | INFO     | ***************************************
[2025-07-27 04:04:53] 2025-07-27 02:04:22,550 | INFO     | 
[2025-07-27 04:04:53] 2025-07-27 02:04:22,551 | INFO     | architecture information:
[2025-07-27 04:04:53] 2025-07-27 02:04:22,551 | INFO     | executing command: cat /etc/os-release
[2025-07-27 04:04:53] 2025-07-27 02:04:22,559 | INFO     | cat /etc/os-release:
[2025-07-27 04:04:53] NAME="CentOS Linux"
[2025-07-27 04:04:53] VERSION="7 (Core)"
[2025-07-27 04:04:53] ID="centos"
[2025-07-27 04:04:53] ID_LIKE="rhel fedora"
[2025-07-27 04:04:53] VERSION_ID="7"
[2025-07-27 04:04:53] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-27 04:04:53] ANSI_COLOR="0;31"
[2025-07-27 04:04:53] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-27 04:04:53] HOME_URL="https://www.centos.org/"
[2025-07-27 04:04:53] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-27 04:04:53] 
[2025-07-27 04:04:53] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-27 04:04:53] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-27 04:04:53] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-27 04:04:53] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-27 04:04:53] 
[2025-07-27 04:04:53] 2025-07-27 02:04:22,559 | INFO     | ***************************************
[2025-07-27 04:04:53] 2025-07-27 02:04:23,062 | INFO     | executing command: df -mP /var/lib/boinc2/slots/0
[2025-07-27 04:04:53] 2025-07-27 02:04:23,071 | INFO     | sufficient remaining disk space (178278891520 B)
[2025-07-27 04:04:53] 2025-07-27 02:04:23,071 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-27 04:04:53] 2025-07-27 02:04:23,071 | INFO     | current server update state: UPDATING_FINAL
[2025-07-27 04:04:53] 2025-07-27 02:04:23,071 | INFO     | update_server=False
[2025-07-27 04:04:53] 2025-07-27 02:04:23,071 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-27 04:04:53] 2025-07-27 02:04:23,071 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-27 04:04:53] 2025-07-27 02:04:23,071 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-27 04:04:53] 2025-07-27 02:04:23,250 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-07-27 04:04:53] 2025-07-27 02:04:23,250 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-07-27 04:04:53] 2025-07-27 02:04:23,250 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-27 04:04:53] 2025-07-27 02:04:23,250 | INFO     | will abort loop
[2025-07-27 04:04:53] 2025-07-27 02:04:23,583 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-27 04:04:53] 2025-07-27 02:04:23,760 | INFO     | all payload control threads have been joined
[2025-07-27 04:04:53] 2025-07-27 02:04:23,847 | INFO     | all data control threads have been joined
[2025-07-27 04:04:53] 2025-07-27 02:04:23,867 | INFO     | all job control threads have been joined
[2025-07-27 04:04:53] 2025-07-27 02:04:24,073 | INFO     | [job] retrieve thread has finished
[2025-07-27 04:04:53] 2025-07-27 02:04:24,074 | INFO     | [job] queue monitor thread has finished
[2025-07-27 04:04:53] 2025-07-27 02:04:24,253 | INFO     | [job] job monitor thread has finished
[2025-07-27 04:04:53] 2025-07-27 02:04:24,617 | INFO     | [payload] validate_post thread has finished
[2025-07-27 04:04:53] 2025-07-27 02:04:24,667 | INFO     | [job] validate thread has finished
[2025-07-27 04:04:53] 2025-07-27 02:04:24,765 | INFO     | [payload] control thread has finished
[2025-07-27 04:04:53] 2025-07-27 02:04:24,850 | INFO     | [data] control thread has finished
[2025-07-27 04:04:53] 2025-07-27 02:04:24,867 | INFO     | [payload] validate_pre thread has finished
[2025-07-27 04:04:53] 2025-07-27 02:04:24,871 | INFO     | [job] control thread has finished
[2025-07-27 04:04:53] 2025-07-27 02:04:24,893 | INFO     | [job] create_data_payload thread has finished
[2025-07-27 04:04:53] 2025-07-27 02:04:24,959 | INFO     | [payload] failed_post thread has finished
[2025-07-27 04:04:53] 2025-07-27 02:04:25,073 | INFO     | [data] copytool_out thread has finished
[2025-07-27 04:04:53] 2025-07-27 02:04:25,167 | INFO     | [data] copytool_in thread has finished
[2025-07-27 04:04:53] 2025-07-27 02:04:25,480 | INFO     | [payload] execute_payloads thread has finished
[2025-07-27 04:04:53] 2025-07-27 02:04:27,587 | INFO     | [data] queue_monitor thread has finished
[2025-07-27 04:04:53] 2025-07-27 02:04:33,774 | INFO     | job.realtimelogging is not enabled
[2025-07-27 04:04:53] 2025-07-27 02:04:34,777 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-27 04:04:53] 2025-07-27 02:04:35,909 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139883740059456)>', '<ExcThread(monitor, started 139883091834624)>']
[2025-07-27 04:04:53] 2025-07-27 02:04:40,932 | INFO     | all workflow threads have been joined
[2025-07-27 04:04:53] 2025-07-27 02:04:40,932 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-27 04:04:53] 2025-07-27 02:04:40,932 | INFO     | traces error code: 0
[2025-07-27 04:04:53] 2025-07-27 02:04:40,932 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-27 04:04:53] 2025-07-27 02:04:53,651 | INFO     | PID=1637757 has CPU usage=1.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-27 04:04:53] 2025-07-27 02:04:53,651 | INFO     | .. there are 3 such processes running
[2025-07-27 04:04:53] 2025-07-27 02:04:53,652 | INFO     | found 0 job(s) in 20 queues
[2025-07-27 04:04:53] 2025-07-27 02:04:53,652 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-27 04:04:53] 2025-07-27 02:04:53,652 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-27 04:04:53] 2025-07-27 02:04:53,652 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-27 04:04:53] 2025-07-27 02:04:53,652 | INFO     | [monitor] control thread has ended
[2025-07-27 04:04:53] 2025-07-27 02:04:53,713 [wrapper] ==== pilot stdout END ====
[2025-07-27 04:04:53] 2025-07-27 02:04:53,715 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-27 04:04:53] 2025-07-27 02:04:53,716 [wrapper] pilotpid: 1637757
[2025-07-27 04:04:53] 2025-07-27 02:04:53,717 [wrapper] Pilot exit status: 0
[2025-07-27 04:04:53] 2025-07-27 02:04:53,721 [wrapper] pandaids: 6745057492
[2025-07-27 04:04:53] 2025-07-27 02:04:53,737 [wrapper] cleanup supervisor_pilot 1707111 1637758
[2025-07-27 04:04:53] 2025-07-27 02:04:53,738 [wrapper] Test setup, not cleaning
[2025-07-27 04:04:53] 2025-07-27 02:04:53,740 [wrapper] apfmon messages muted
[2025-07-27 04:04:53] 2025-07-27 02:04:53,741 [wrapper] ==== wrapper stdout END ====
[2025-07-27 04:04:53] 2025-07-27 02:04:53,742 [wrapper] ==== wrapper stderr END ====
[2025-07-27 04:04:53]  *** Error codes and diagnostics ***
[2025-07-27 04:04:53]     "exeErrorCode": 0,
[2025-07-27 04:04:53]     "exeErrorDiag": "",
[2025-07-27 04:04:53]     "pilotErrorCode": 0,
[2025-07-27 04:04:53]     "pilotErrorDiag": "",
[2025-07-27 04:04:53]  *** Listing of results directory ***
[2025-07-27 04:04:53] insgesamt 344632
[2025-07-27 04:04:53] -rw-r--r-- 1 boinc boinc    530466 25. Jul 17:14 pilot3.tar.gz
[2025-07-27 04:04:53] -rw-r--r-- 1 boinc boinc      5112 25. Jul 17:23 queuedata.json
[2025-07-27 04:04:53] -rwx------ 1 boinc boinc     36292 25. Jul 17:23 runpilot2-wrapper.sh
[2025-07-27 04:04:53] -rw-r--r-- 1 boinc boinc       100 27. Jul 02:34 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-27 04:04:53] -rwxr-xr-x 1 boinc boinc      7986 27. Jul 02:34 run_atlas
[2025-07-27 04:04:53] -rw-r--r-- 1 boinc boinc       105 27. Jul 02:34 job.xml
[2025-07-27 04:04:53] -rw-r--r-- 2 boinc boinc     15095 27. Jul 02:34 start_atlas.sh
[2025-07-27 04:04:53] drwxrwx--x 2 boinc boinc      4096 27. Jul 02:34 shared
[2025-07-27 04:04:53] -rw-r--r-- 2 boinc boinc    542890 27. Jul 02:34 input.tar.gz
[2025-07-27 04:04:53] -rw-r--r-- 1 boinc boinc      9586 27. Jul 02:34 init_data.xml
[2025-07-27 04:04:53] -rw-r--r-- 2 boinc boinc 144602781 27. Jul 02:34 EVNT.45743347._001297.pool.root.1
[2025-07-27 04:04:53] -rw-r--r-- 1 boinc boinc         0 27. Jul 02:34 boinc_lockfile
[2025-07-27 04:04:53] -rw-r--r-- 1 boinc boinc      2561 27. Jul 02:34 pandaJob.out
[2025-07-27 04:04:53] -rw------- 1 boinc boinc    980117 27. Jul 02:34 agis_schedconf.cvmfs.json
[2025-07-27 04:04:53] -rw------- 1 boinc boinc   1593052 27. Jul 02:34 agis_ddmendpoints.agis.ALL.json
[2025-07-27 04:04:53] drwx------ 4 boinc boinc      4096 27. Jul 02:34 pilot3
[2025-07-27 04:04:53] -rw------- 1 boinc boinc 202861475 27. Jul 04:03 HITS.45743349._023036.pool.root.1
[2025-07-27 04:04:53] -rw-r--r-- 1 boinc boinc       530 27. Jul 04:03 boinc_task_state.xml
[2025-07-27 04:04:53] -rw------- 1 boinc boinc      1023 27. Jul 04:04 memory_monitor_summary.json
[2025-07-27 04:04:53] -rw------- 1 boinc boinc    241025 27. Jul 04:04 log.45743349._023036.job.log.tgz.1
[2025-07-27 04:04:53] -rw------- 1 boinc boinc      7763 27. Jul 04:04 heartbeat.json
[2025-07-27 04:04:53] -rw-r--r-- 1 boinc boinc        27 27. Jul 04:04 wrapper_checkpoint.txt
[2025-07-27 04:04:53] -rw-r--r-- 1 boinc boinc      8192 27. Jul 04:04 boinc_mmap_file
[2025-07-27 04:04:53] -rw------- 1 boinc boinc       822 27. Jul 04:04 pilotlog.txt
[2025-07-27 04:04:53] -rw------- 1 boinc boinc        95 27. Jul 04:04 pilot_heartbeat.json
[2025-07-27 04:04:53] -rw------- 1 boinc boinc    539487 27. Jul 04:04 log.45743349._023036.job.log.1
[2025-07-27 04:04:53] -rw------- 1 boinc boinc       357 27. Jul 04:04 output.list
[2025-07-27 04:04:53] -rw-r--r-- 1 boinc boinc       620 27. Jul 04:04 runtime_log
[2025-07-27 04:04:53] -rw------- 1 boinc boinc    798720 27. Jul 04:04 result.tar.gz
[2025-07-27 04:04:53] -rw-r--r-- 1 boinc boinc      8637 27. Jul 04:04 runtime_log.err
[2025-07-27 04:04:53] -rw------- 1 boinc boinc       641 27. Jul 04:04 NqBMDmyRZz7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmdqPLDmkEZgTm.diag
[2025-07-27 04:04:53] -rw-r--r-- 1 boinc boinc     21446 27. Jul 04:04 stderr.txt
[2025-07-27 04:04:53] HITS file was successfully produced:
[2025-07-27 04:04:53] -rw------- 1 boinc boinc 202861475 27. Jul 04:03 shared/HITS.pool.root.1
[2025-07-27 04:04:53]  *** Contents of shared directory: ***
[2025-07-27 04:04:53] insgesamt 340660
[2025-07-27 04:04:53] -rw-r--r-- 2 boinc boinc     15095 27. Jul 02:34 start_atlas.sh
[2025-07-27 04:04:53] -rw-r--r-- 2 boinc boinc    542890 27. Jul 02:34 input.tar.gz
[2025-07-27 04:04:53] -rw-r--r-- 2 boinc boinc 144602781 27. Jul 02:34 ATLAS.root_0
[2025-07-27 04:04:53] -rw------- 1 boinc boinc 202861475 27. Jul 04:03 HITS.pool.root.1
[2025-07-27 04:04:53] -rw------- 1 boinc boinc    798720 27. Jul 04:04 result.tar.gz
04:04:54 (1634125): run_atlas exited; CPU time 20871.577410
04:04:54 (1634125): called boinc_finish(0)

</stderr_txt>
]]>

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