Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
21:52:48 (3179778): wrapper (7.7.26015): starting
21:52:48 (3179778): wrapper: running run_atlas (--nthreads 8)
[2025-07-25 21:52:48] Arguments: --nthreads 8
[2025-07-25 21:52:48] Threads: 8
[2025-07-25 21:52:48] Checking for CVMFS
[2025-07-25 21:52:49] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-25 21:52:49] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-25 21:52:49] Running cvmfs_config stat atlas.cern.ch
[2025-07-25 21:52:50] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-25 21:52:50] 2.13.1.0 82162 6105 199024 148759 0 26 35675425 40960001 19378 16776704 0 18201044 99.866 13553913 17513 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-07-25 21:52:50] CVMFS is ok
[2025-07-25 21:52:50] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-25 21:52:50] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-25 21:52:50] Further information can be found at the LHC@home message board.
[2025-07-25 21:52:50] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-25 21:52:50] Checking for apptainer binary...
[2025-07-25 21:52:50] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-25 21:52:50] Running /usr/bin/apptainer --version
[2025-07-25 21:52:50] apptainer version 1.4.1-1.el9
[2025-07-25 21:52:50] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-25 21:52:51] c-211-33-1.aglt2.org
[2025-07-25 21:52:51] apptainer works
[2025-07-25 21:52:51] Set ATHENA_PROC_NUMBER=8
[2025-07-25 21:52:51] Set ATHENA_CORE_NUMBER=8
[2025-07-25 21:52:51] Starting ATLAS job with PandaID=6745059420
[2025-07-25 21:52:51] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
22:00:04 (3179778): BOINC client no longer exists - exiting
22:00:04 (3179778): timer handler: client dead, exiting
22:02:34 (3222187): wrapper (7.7.26015): starting
22:02:34 (3222187): wrapper: running run_atlas (--nthreads 8)
[2025-07-25 22:02:34] Arguments: --nthreads 8
[2025-07-25 22:02:34] Threads: 8
[2025-07-25 22:02:34] This job has been restarted, cleaning up previous attempt
[2025-07-25 22:02:34] Checking for CVMFS
[2025-07-25 22:02:34] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-25 22:02:35] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-25 22:02:35] Running cvmfs_config stat atlas.cern.ch
[2025-07-25 22:02:35] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-25 22:02:35] 2.13.1.0 82162 6115 199792 148759 2 196 35681052 40960001 17524 16776704 0 18302270 99.866 13553982 17513 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-07-25 22:02:35] CVMFS is ok
[2025-07-25 22:02:35] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-25 22:02:35] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-25 22:02:35] Further information can be found at the LHC@home message board.
[2025-07-25 22:02:35] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-25 22:02:35] Checking for apptainer binary...
[2025-07-25 22:02:35] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-25 22:02:35] Running /usr/bin/apptainer --version
[2025-07-25 22:02:35] apptainer version 1.4.1-1.el9
[2025-07-25 22:02:35] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-25 22:02:35] c-211-33-1.aglt2.org
[2025-07-25 22:02:35] apptainer works
[2025-07-25 22:02:35] Set ATHENA_PROC_NUMBER=8
[2025-07-25 22:02:35] Set ATHENA_CORE_NUMBER=8
[2025-07-25 22:02:35] Starting ATLAS job with PandaID=6745059420
[2025-07-25 22:02:35] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-26 01:34:00]  *** The last 200 lines of the pilot log: ***
[2025-07-26 01:34:00] 2025-07-26 05:33:11,481 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-26 01:34:00] 2025-07-26 05:33:11,482 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-26 01:34:00] 2025-07-26 05:33:11,482 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-26 01:34:00] 2025-07-26 05:33:11,487 | INFO     | fitting pss+swap vs Time
[2025-07-26 01:34:00] 2025-07-26 05:33:11,488 | INFO     | sum of square deviations: 2710795132.3737926
[2025-07-26 01:34:00] 2025-07-26 05:33:11,489 | INFO     | sum of deviations: 47047188699.49515
[2025-07-26 01:34:00] 2025-07-26 05:33:11,489 | INFO     | mean x: 1753501668.247573
[2025-07-26 01:34:00] 2025-07-26 05:33:11,490 | INFO     | mean y: 2487065.990291262
[2025-07-26 01:34:00] 2025-07-26 05:33:11,490 | INFO     | -- intersect: -30430400644.960308
[2025-07-26 01:34:00] 2025-07-26 05:33:11,490 | INFO     | intersect: -30430400644.960308
[2025-07-26 01:34:00] 2025-07-26 05:33:11,490 | INFO     | chi2: 1.6023700075916407
[2025-07-26 01:34:00] 2025-07-26 05:33:11,491 | INFO     | sum of square deviations: 2518190467.054717
[2025-07-26 01:34:00] 2025-07-26 05:33:11,492 | INFO     | sum of deviations: 45548275852.87562
[2025-07-26 01:34:00] 2025-07-26 05:33:11,493 | INFO     | mean x: 1753501515.756219
[2025-07-26 01:34:00] 2025-07-26 05:33:11,493 | INFO     | mean y: 2485879.0995024876
[2025-07-26 01:34:00] 2025-07-26 05:33:11,493 | INFO     | -- intersect: -31714324978.94285
[2025-07-26 01:34:00] 2025-07-26 05:33:11,493 | INFO     | intersect: -31714324978.94285
[2025-07-26 01:34:00] 2025-07-26 05:33:11,493 | INFO     | chi2: 1.6027387030186848
[2025-07-26 01:34:00] 2025-07-26 05:33:11,493 | INFO     | current chi2=1.6027387030186848 (change=-0.023009381434831354 %)
[2025-07-26 01:34:00] 2025-07-26 05:33:11,493 | INFO     | right removable region: 200
[2025-07-26 01:34:00] 2025-07-26 05:33:11,494 | INFO     | sum of square deviations: 2518121292.009966
[2025-07-26 01:34:00] 2025-07-26 05:33:11,495 | INFO     | sum of deviations: 10747502717.139297
[2025-07-26 01:34:00] 2025-07-26 05:33:11,495 | INFO     | mean x: 1753501820.766169
[2025-07-26 01:34:00] 2025-07-26 05:33:11,496 | INFO     | mean y: 2515554.726368159
[2025-07-26 01:34:00] 2025-07-26 05:33:11,496 | INFO     | -- intersect: -7481542359.001213
[2025-07-26 01:34:00] 2025-07-26 05:33:11,496 | INFO     | intersect: -7481542359.001213
[2025-07-26 01:34:00] 2025-07-26 05:33:11,496 | INFO     | chi2: 0.022789178663326536
[2025-07-26 01:34:00] 2025-07-26 05:33:11,496 | INFO     | current chi2=0.022789178663326536 (change=98.57778299922259 %)
[2025-07-26 01:34:00] 2025-07-26 05:33:11,497 | INFO     | sum of square deviations: 2334821109.1224623
[2025-07-26 01:34:00] 2025-07-26 05:33:11,498 | INFO     | sum of deviations: 6592317227.336734
[2025-07-26 01:34:00] 2025-07-26 05:33:11,498 | INFO     | mean x: 1753501973.2755103
[2025-07-26 01:34:00] 2025-07-26 05:33:11,499 | INFO     | mean y: 2518974.8826530613
[2025-07-26 01:34:00] 2025-07-26 05:33:11,499 | INFO     | -- intersect: -4948456164.680724
[2025-07-26 01:34:00] 2025-07-26 05:33:11,499 | INFO     | intersect: -4948456164.680724
[2025-07-26 01:34:00] 2025-07-26 05:33:11,499 | INFO     | chi2: 0.0014327444972683206
[2025-07-26 01:34:00] 2025-07-26 05:33:11,499 | INFO     | current chi2=0.0014327444972683206 (change=93.71304899384565 %)
[2025-07-26 01:34:00] 2025-07-26 05:33:11,500 | INFO     | sum of square deviations: 2160649088.7643914
[2025-07-26 01:34:00] 2025-07-26 05:33:11,501 | INFO     | sum of deviations: 5907331327.732984
[2025-07-26 01:34:00] 2025-07-26 05:33:11,501 | INFO     | mean x: 1753502125.7801046
[2025-07-26 01:34:00] 2025-07-26 05:33:11,501 | INFO     | mean y: 2519574.35078534
[2025-07-26 01:34:00] 2025-07-26 05:33:11,501 | INFO     | -- intersect: -4791649962.355849
[2025-07-26 01:34:00] 2025-07-26 05:33:11,501 | INFO     | intersect: -4791649962.355849
[2025-07-26 01:34:00] 2025-07-26 05:33:11,502 | INFO     | chi2: 0.0012935932878906015
[2025-07-26 01:34:00] 2025-07-26 05:33:11,502 | INFO     | current chi2=0.0012935932878906015 (change=9.712213841548554 %)
[2025-07-26 01:34:00] 2025-07-26 05:33:11,502 | INFO     | left removable region: 30
[2025-07-26 01:34:00] 2025-07-26 05:33:11,502 | INFO     | sum of square deviations: 1523449944.4764783
[2025-07-26 01:34:00] 2025-07-26 05:33:11,503 | INFO     | sum of deviations: 3086922123.435294
[2025-07-26 01:34:00] 2025-07-26 05:33:11,504 | INFO     | mean x: 1753502400.3117647
[2025-07-26 01:34:00] 2025-07-26 05:33:11,504 | INFO     | mean y: 2521492.4823529413
[2025-07-26 01:34:00] 2025-07-26 05:33:11,504 | INFO     | -- intersect: -3550549202.5179925
[2025-07-26 01:34:00] 2025-07-26 05:33:11,504 | INFO     | intersect: -3550549202.5179925
[2025-07-26 01:34:00] 2025-07-26 05:33:11,504 | INFO     | chi2: 0.0005850674864113669
[2025-07-26 01:34:00] 2025-07-26 05:33:11,504 | INFO     | -- intersect: -3550549202.5179925
[2025-07-26 01:34:00] 2025-07-26 05:33:11,505 | INFO     | current memory leak: 2.03 B/s (using 170 data points, chi2=0.00)
[2025-07-26 01:34:00] 2025-07-26 05:33:11,505 | INFO     | could have reported an average CPU frequency of 2518 MHz (10 samples)
[2025-07-26 01:34:00] 2025-07-26 05:33:11,506 | INFO     | ..............................
[2025-07-26 01:34:00] 2025-07-26 05:33:11,506 | INFO     | . Timing measurements:
[2025-07-26 01:34:00] 2025-07-26 05:33:11,506 | INFO     | . get job = 0 s
[2025-07-26 01:34:00] 2025-07-26 05:33:11,506 | INFO     | . initial setup = 1 s
[2025-07-26 01:34:00] 2025-07-26 05:33:11,506 | INFO     | . payload setup = 13 s
[2025-07-26 01:34:00] 2025-07-26 05:33:11,506 | INFO     | . stage-in = 0 s
[2025-07-26 01:34:00] 2025-07-26 05:33:11,506 | INFO     | . payload execution = 12570 s
[2025-07-26 01:34:00] 2025-07-26 05:33:11,506 | INFO     | . stage-out = 2 s
[2025-07-26 01:34:00] 2025-07-26 05:33:11,506 | INFO     | . log creation = 0 s
[2025-07-26 01:34:00] 2025-07-26 05:33:11,506 | INFO     | ..............................
[2025-07-26 01:34:00] 2025-07-26 05:33:11,629 | INFO     | 
[2025-07-26 01:34:00] 2025-07-26 05:33:11,630 | INFO     | job summary report
[2025-07-26 01:34:00] 2025-07-26 05:33:11,630 | INFO     | --------------------------------------------------
[2025-07-26 01:34:00] 2025-07-26 05:33:11,630 | INFO     | PanDA job id: 6745059420
[2025-07-26 01:34:00] 2025-07-26 05:33:11,630 | INFO     | task id: 45743349
[2025-07-26 01:34:00] 2025-07-26 05:33:11,630 | INFO     | errors: (none)
[2025-07-26 01:34:00] 2025-07-26 05:33:11,630 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-26 01:34:00] 2025-07-26 05:33:11,630 | INFO     | pilot state: finished 
[2025-07-26 01:34:00] 2025-07-26 05:33:11,630 | INFO     | transexitcode: 0
[2025-07-26 01:34:00] 2025-07-26 05:33:11,631 | INFO     | exeerrorcode: 0
[2025-07-26 01:34:00] 2025-07-26 05:33:11,631 | INFO     | exeerrordiag: 
[2025-07-26 01:34:00] 2025-07-26 05:33:11,631 | INFO     | exitcode: 0
[2025-07-26 01:34:00] 2025-07-26 05:33:11,631 | INFO     | exitmsg: OK
[2025-07-26 01:34:00] 2025-07-26 05:33:11,631 | INFO     | cpuconsumptiontime: 59923 s
[2025-07-26 01:34:00] 2025-07-26 05:33:11,631 | INFO     | nevents: 400
[2025-07-26 01:34:00] 2025-07-26 05:33:11,631 | INFO     | neventsw: 0
[2025-07-26 01:34:00] 2025-07-26 05:33:11,631 | INFO     | pid: 3252257
[2025-07-26 01:34:00] 2025-07-26 05:33:11,631 | INFO     | pgrp: 3252257
[2025-07-26 01:34:00] 2025-07-26 05:33:11,631 | INFO     | corecount: 8
[2025-07-26 01:34:00] 2025-07-26 05:33:11,631 | INFO     | event service: False
[2025-07-26 01:34:00] 2025-07-26 05:33:11,631 | INFO     | sizes: {0: 2397301, 1: 2397500, 9: 2397762, 12: 2397790, 12588: 2427670, 12591: 2436668, 12592: 2436852, 12599: 2437046}
[2025-07-26 01:34:00] 2025-07-26 05:33:11,632 | INFO     | --------------------------------------------------
[2025-07-26 01:34:00] 2025-07-26 05:33:11,632 | INFO     | 
[2025-07-26 01:34:00] 2025-07-26 05:33:11,632 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-07-26 01:34:00] 2025-07-26 05:33:11,661 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-26 01:34:00] 2025-07-26 05:33:11,662 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-26 01:34:00] 2025-07-26 05:33:11,662 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-26 01:34:00] 2025-07-26 05:33:11,662 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-26 01:34:00] 2025-07-26 05:33:11,662 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-26 01:34:00] 2025-07-26 05:33:11,662 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-26 01:34:00] 2025-07-26 05:33:11,662 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-26 01:34:00] 2025-07-26 05:33:11,663 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-26 01:34:00] 2025-07-26 05:33:11,663 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-26 01:34:00] 2025-07-26 05:33:11,663 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-26 01:34:00] 2025-07-26 05:33:11,663 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-26 01:34:00] 2025-07-26 05:33:11,663 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-26 01:34:00] 2025-07-26 05:33:11,663 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-26 01:34:00] 2025-07-26 05:33:11,663 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-26 01:34:00] 2025-07-26 05:33:11,663 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-26 01:34:00] 2025-07-26 05:33:11,663 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-26 01:34:00] 2025-07-26 05:33:11,663 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-26 01:34:00] 2025-07-26 05:33:11,664 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-26 01:34:00] 2025-07-26 05:33:11,664 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-26 01:34:00] 2025-07-26 05:33:11,664 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-26 01:34:00] 2025-07-26 05:33:11,664 | INFO     | job 6745059420 has completed (purged errors)
[2025-07-26 01:34:00] 2025-07-26 05:33:11,664 | INFO     | overall cleanup function is called
[2025-07-26 01:34:00] 2025-07-26 05:33:12,673 | INFO     | --- collectZombieJob: --- 10, [3252257]
[2025-07-26 01:34:00] 2025-07-26 05:33:12,673 | INFO     | zombie collector waiting for pid 3252257
[2025-07-26 01:34:00] 2025-07-26 05:33:12,673 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-26 01:34:00] 2025-07-26 05:33:12,673 | INFO     | collected zombie processes
[2025-07-26 01:34:00] 2025-07-26 05:33:12,674 | INFO     | will attempt to kill all subprocesses of pid=3252257
[2025-07-26 01:34:00] 2025-07-26 05:33:13,065 | INFO     | process IDs to be killed: [3252257] (in reverse order)
[2025-07-26 01:34:00] 2025-07-26 05:33:13,182 | WARNING  | found no corresponding commands to process id(s)
[2025-07-26 01:34:00] 2025-07-26 05:33:13,183 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-26 01:34:00] 2025-07-26 05:33:13,201 | INFO     | did not find any defunct processes belonging to 3252257
[2025-07-26 01:34:00] 2025-07-26 05:33:13,219 | INFO     | did not find any defunct processes belonging to 3252257
[2025-07-26 01:34:00] 2025-07-26 05:33:13,219 | INFO     | ready for new job
[2025-07-26 01:34:00] 2025-07-26 05:33:13,220 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-26 01:34:00] 2025-07-26 05:33:13,222 | INFO     | ***************************************
[2025-07-26 01:34:00] 2025-07-26 05:33:13,222 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-26 01:34:00] 2025-07-26 05:33:13,222 | INFO     | ***************************************
[2025-07-26 01:34:00] 2025-07-26 05:33:13,223 | INFO     | 
[2025-07-26 01:34:00] 2025-07-26 05:33:13,229 | INFO     | architecture information:
[2025-07-26 01:34:00] 2025-07-26 05:33:13,229 | INFO     | executing command: cat /etc/os-release
[2025-07-26 01:34:00] 2025-07-26 05:33:13,252 | INFO     | cat /etc/os-release:
[2025-07-26 01:34:00] NAME="CentOS Linux"
[2025-07-26 01:34:00] VERSION="7 (Core)"
[2025-07-26 01:34:00] ID="centos"
[2025-07-26 01:34:00] ID_LIKE="rhel fedora"
[2025-07-26 01:34:00] VERSION_ID="7"
[2025-07-26 01:34:00] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-26 01:34:00] ANSI_COLOR="0;31"
[2025-07-26 01:34:00] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-26 01:34:00] HOME_URL="https://www.centos.org/"
[2025-07-26 01:34:00] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-26 01:34:00] 
[2025-07-26 01:34:00] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-26 01:34:00] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-26 01:34:00] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-26 01:34:00] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-26 01:34:00] 
[2025-07-26 01:34:00] 2025-07-26 05:33:13,252 | INFO     | ***************************************
[2025-07-26 01:34:00] 2025-07-26 05:33:13,755 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-07-26 01:34:00] 2025-07-26 05:33:13,780 | INFO     | sufficient remaining disk space (128490405888 B)
[2025-07-26 01:34:00] 2025-07-26 05:33:13,781 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-26 01:34:00] 2025-07-26 05:33:13,781 | INFO     | current server update state: UPDATING_FINAL
[2025-07-26 01:34:00] 2025-07-26 05:33:13,781 | INFO     | update_server=False
[2025-07-26 01:34:00] 2025-07-26 05:33:13,781 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-26 01:34:00] 2025-07-26 05:33:13,781 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-26 01:34:00] 2025-07-26 05:33:13,782 | INFO     | aborting loop
[2025-07-26 01:34:00] 2025-07-26 05:33:14,059 | INFO     | all job control threads have been joined
[2025-07-26 01:34:00] 2025-07-26 05:33:14,143 | INFO     | all data control threads have been joined
[2025-07-26 01:34:00] 2025-07-26 05:33:14,307 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-26 01:34:00] 2025-07-26 05:33:14,786 | INFO     | [job] retrieve thread has finished
[2025-07-26 01:34:00] 2025-07-26 05:33:14,787 | INFO     | [job] job monitor thread has finished
[2025-07-26 01:34:00] 2025-07-26 05:33:14,951 | INFO     | all payload control threads have been joined
[2025-07-26 01:34:00] 2025-07-26 05:33:14,992 | INFO     | [job] validate thread has finished
[2025-07-26 01:34:00] 2025-07-26 05:33:15,065 | INFO     | [job] control thread has finished
[2025-07-26 01:34:00] 2025-07-26 05:33:15,129 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-26 01:34:00] 2025-07-26 05:33:15,148 | INFO     | [data] control thread has finished
[2025-07-26 01:34:00] 2025-07-26 05:33:15,281 | INFO     | [payload] execute_payloads thread has finished
[2025-07-26 01:34:00] 2025-07-26 05:33:15,816 | INFO     | [payload] failed_post thread has finished
[2025-07-26 01:34:00] 2025-07-26 05:33:15,836 | INFO     | [data] copytool_in thread has finished
[2025-07-26 01:34:00] 2025-07-26 05:33:15,956 | INFO     | [payload] control thread has finished
[2025-07-26 01:34:00] 2025-07-26 05:33:15,991 | INFO     | [payload] validate_pre thread has finished
[2025-07-26 01:34:00] 2025-07-26 05:33:16,078 | INFO     | [job] create_data_payload thread has finished
[2025-07-26 01:34:00] 2025-07-26 05:33:16,313 | INFO     | [data] copytool_out thread has finished
[2025-07-26 01:34:00] 2025-07-26 05:33:16,344 | INFO     | [payload] validate_post thread has finished
[2025-07-26 01:34:00] 2025-07-26 05:33:16,639 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-26 01:34:00] 2025-07-26 05:33:17,645 | INFO     | [job] queue monitor thread has finished
[2025-07-26 01:34:00] 2025-07-26 05:33:19,135 | INFO     | [data] queue_monitor thread has finished
[2025-07-26 01:34:00] 2025-07-26 05:33:24,182 | INFO     | job.realtimelogging is not enabled
[2025-07-26 01:34:00] 2025-07-26 05:33:25,187 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-26 01:34:00] 2025-07-26 05:33:26,095 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140203512833856)>', '<ExcThread(monitor, started 140202890749696)>']
[2025-07-26 01:34:00] 2025-07-26 05:33:31,120 | INFO     | all workflow threads have been joined
[2025-07-26 01:34:00] 2025-07-26 05:33:31,120 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-26 01:34:00] 2025-07-26 05:33:31,121 | INFO     | traces error code: 0
[2025-07-26 01:34:00] 2025-07-26 05:33:31,121 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-26 01:34:00] 2025-07-26 05:33:43,863 | INFO     | PID=3232924 has CPU usage=3.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-26 01:34:00] 2025-07-26 05:33:43,863 | INFO     | .. there are 15 such processes running
[2025-07-26 01:34:00] 2025-07-26 05:33:43,863 | INFO     | found 0 job(s) in 20 queues
[2025-07-26 01:34:00] 2025-07-26 05:33:43,864 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-26 01:34:00] 2025-07-26 05:33:43,864 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-26 01:34:00] 2025-07-26 05:33:43,864 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-26 01:34:00] 2025-07-26 05:33:43,864 | INFO     | [monitor] control thread has ended
[2025-07-26 01:34:00] 2025-07-26 05:33:44,097 [wrapper] ==== pilot stdout END ====
[2025-07-26 01:34:00] 2025-07-26 05:33:44,104 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-26 01:34:00] 2025-07-26 05:33:44,111 [wrapper] pilotpid: 3232924
[2025-07-26 01:34:00] 2025-07-26 05:33:44,116 [wrapper] Pilot exit status: 0
[2025-07-26 01:34:00] 2025-07-26 05:33:44,137 [wrapper] pandaids: 6745059420 6745059420
[2025-07-26 01:34:00] 2025-07-26 05:33:44,219 [wrapper] cleanup supervisor_pilot 3591873 3232925
[2025-07-26 01:34:00] 2025-07-26 05:33:44,225 [wrapper] Test setup, not cleaning
[2025-07-26 01:34:00] 2025-07-26 05:33:44,228 [wrapper] apfmon messages muted
[2025-07-26 01:34:00] 2025-07-26 05:33:44,231 [wrapper] ==== wrapper stdout END ====
[2025-07-26 01:34:00] 2025-07-26 05:33:44,238 [wrapper] ==== wrapper stderr END ====
[2025-07-26 01:34:00]  *** Error codes and diagnostics ***
[2025-07-26 01:34:00]     "exeErrorCode": 0,
[2025-07-26 01:34:00]     "exeErrorDiag": "",
[2025-07-26 01:34:00]     "pilotErrorCode": 0,
[2025-07-26 01:34:00]     "pilotErrorDiag": "",
[2025-07-26 01:34:00]  *** Listing of results directory ***
[2025-07-26 01:34:00] total 659984
[2025-07-26 01:34:00] drwx------. 4 boincer umatlas      4096 Jun 17 06:04 pilot3
[2025-07-26 01:34:00] -rw-r--r--. 1 boincer umatlas    530466 Jul 25 13:56 pilot3.tar.gz
[2025-07-26 01:34:00] -rw-r--r--. 1 boincer umatlas      5112 Jul 25 14:04 queuedata.json
[2025-07-26 01:34:00] -rwx------. 1 boincer umatlas     36292 Jul 25 14:04 runpilot2-wrapper.sh
[2025-07-26 01:34:00] -rw-r--r--. 1 boincer umatlas       100 Jul 25 21:52 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-26 01:34:00] -rwxr-xr-x. 1 boincer umatlas      7986 Jul 25 21:52 run_atlas
[2025-07-26 01:34:00] -rw-r--r--. 1 boincer umatlas       105 Jul 25 21:52 job.xml
[2025-07-26 01:34:00] -rw-r--r--. 3 boincer umatlas 231154508 Jul 25 21:52 EVNT.45743347._001405.pool.root.1
[2025-07-26 01:34:00] -rw-r--r--. 3 boincer umatlas 231154508 Jul 25 21:52 ATLAS.root_0
[2025-07-26 01:34:00] -rw-r--r--. 2 boincer umatlas     15095 Jul 25 21:52 start_atlas.sh
[2025-07-26 01:34:00] drwxrwx--x. 2 boincer umatlas      4096 Jul 25 21:52 shared
[2025-07-26 01:34:00] -rw-r--r--. 2 boincer umatlas    542891 Jul 25 21:52 input.tar.gz
[2025-07-26 01:34:00] -rw-r--r--. 1 boincer umatlas         0 Jul 25 21:52 boinc_lockfile
[2025-07-26 01:34:00] -rw-r--r--. 1 boincer umatlas      2561 Jul 25 22:02 pandaJob.out
[2025-07-26 01:34:00] -rw-------. 1 boincer umatlas    979985 Jul 25 22:02 agis_schedconf.cvmfs.json
[2025-07-26 01:34:00] -rw-r--r--. 1 boincer umatlas      6858 Jul 26 01:29 init_data.xml
[2025-07-26 01:34:00] -rw-------. 1 boincer umatlas 206725627 Jul 26 01:32 HITS.45743349._024770.pool.root.1
[2025-07-26 01:34:00] -rw-r--r--. 1 boincer umatlas       531 Jul 26 01:32 boinc_task_state.xml
[2025-07-26 01:34:00] -rw-------. 1 boincer umatlas      1058 Jul 26 01:32 memory_monitor_summary.json
[2025-07-26 01:34:00] -rw-------. 1 boincer umatlas   1593052 Jul 26 01:33 agis_ddmendpoints.agis.ALL.json
[2025-07-26 01:34:00] -rw-------. 1 boincer umatlas    385843 Jul 26 01:33 log.45743349._024770.job.log.tgz.1
[2025-07-26 01:34:00] -rw-------. 1 boincer umatlas        96 Jul 26 01:33 pilot_heartbeat.json
[2025-07-26 01:34:00] -rw-------. 1 boincer umatlas      7858 Jul 26 01:33 heartbeat.json
[2025-07-26 01:34:00] -rw-------. 1 boincer umatlas       823 Jul 26 01:33 pilotlog.txt
[2025-07-26 01:34:00] -rw-------. 1 boincer umatlas   1068309 Jul 26 01:33 log.45743349._024770.job.log.1
[2025-07-26 01:34:00] -rw-------. 1 boincer umatlas       357 Jul 26 01:33 output.list
[2025-07-26 01:34:00] -rw-r--r--. 1 boincer umatlas       620 Jul 26 01:33 runtime_log
[2025-07-26 01:34:00] -rw-------. 1 boincer umatlas   1474560 Jul 26 01:33 result.tar.gz
[2025-07-26 01:34:00] -rw-------. 1 boincer umatlas       787 Jul 26 01:33 yJQNDm4xbz7n9Rq4apOajLDm4fhM0noT9bVof3QYDm2KzKDmFX2jsm.diag
[2025-07-26 01:34:00] -rw-r--r--. 1 boincer umatlas      8756 Jul 26 01:33 runtime_log.err
[2025-07-26 01:34:00] -rw-r--r--. 1 boincer umatlas      8192 Jul 26 01:34 boinc_mmap_file
[2025-07-26 01:34:00] -rw-r--r--. 1 boincer umatlas     23290 Jul 26 01:34 stderr.txt
[2025-07-26 01:34:00] -rw-r--r--. 1 boincer umatlas        28 Jul 26 01:34 wrapper_checkpoint.txt
[2025-07-26 01:34:00] HITS file was successfully produced:
[2025-07-26 01:34:00] -rw-------. 1 boincer umatlas 206725627 Jul 26 01:32 shared/HITS.pool.root.1
[2025-07-26 01:34:00]  *** Contents of shared directory: ***
[2025-07-26 01:34:00] total 429616
[2025-07-26 01:34:00] -rw-r--r--. 3 boincer umatlas 231154508 Jul 25 21:52 ATLAS.root_0
[2025-07-26 01:34:00] -rw-r--r--. 2 boincer umatlas     15095 Jul 25 21:52 start_atlas.sh
[2025-07-26 01:34:00] -rw-r--r--. 2 boincer umatlas    542891 Jul 25 21:52 input.tar.gz
[2025-07-26 01:34:00] -rw-------. 1 boincer umatlas 206725627 Jul 26 01:32 HITS.pool.root.1
[2025-07-26 01:34:00] -rw-------. 1 boincer umatlas   1474560 Jul 26 01:33 result.tar.gz
01:34:02 (3222187): run_atlas exited; CPU time 60312.196756
01:34:02 (3222187): called boinc_finish(0)

</stderr_txt>
]]>

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