Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
03:43:41 (1776526): wrapper (7.7.26015): starting
03:43:41 (1776526): wrapper: running run_atlas (--nthreads 12)
[2025-07-29 03:43:41] Arguments: --nthreads 12
[2025-07-29 03:43:41] Threads: 12
[2025-07-29 03:43:41] Checking for CVMFS
[2025-07-29 03:43:41] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-29 03:43:41] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-29 03:43:41] Running cvmfs_config stat atlas.cern.ch
[2025-07-29 03:43:41] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-29 03:43:41] 2.13.1.0 2237 5695 61060 148875 1 187 3961316 4096000 852 130560 0 4523886 99.990 205748 267 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.85.111:3128 1
[2025-07-29 03:43:41] CVMFS is ok
[2025-07-29 03:43:41] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-29 03:43:41] Checking for apptainer binary...
[2025-07-29 03:43:41] apptainer is not installed, using version from CVMFS
[2025-07-29 03:43:41] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-29 03:43:41] g3250
[2025-07-29 03:43:41] apptainer works
[2025-07-29 03:43:41] Set ATHENA_PROC_NUMBER=12
[2025-07-29 03:43:41] Set ATHENA_CORE_NUMBER=12
[2025-07-29 03:43:41] Starting ATLAS job with PandaID=6745056227
[2025-07-29 03:43:41] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/opt/boinc/instance_homes/boinc_31417/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-29 07:16:26]  *** The last 200 lines of the pilot log: ***
[2025-07-29 07:16:26] 2025-07-29 07:16:06,835 | INFO     | extracted standard memory fields from prmon json
[2025-07-29 07:16:26] 2025-07-29 07:16:06,835 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-29 07:16:26] 2025-07-29 07:16:06,835 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-29 07:16:26] 2025-07-29 07:16:06,835 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-29 07:16:26] 2025-07-29 07:16:06,837 | INFO     | fitting pss+swap vs Time
[2025-07-29 07:16:26] 2025-07-29 07:16:06,837 | INFO     | sum of square deviations: 2830468828.4497566
[2025-07-29 07:16:26] 2025-07-29 07:16:06,837 | INFO     | sum of deviations: 39204649638.82301
[2025-07-29 07:16:26] 2025-07-29 07:16:06,837 | INFO     | mean x: 1753766990.1770334
[2025-07-29 07:16:26] 2025-07-29 07:16:06,838 | INFO     | mean y: 2669282.004784689
[2025-07-29 07:16:26] 2025-07-29 07:16:06,838 | INFO     | -- intersect: -24288649423.554398
[2025-07-29 07:16:26] 2025-07-29 07:16:06,838 | INFO     | intersect: -24288649423.554398
[2025-07-29 07:16:26] 2025-07-29 07:16:06,838 | INFO     | chi2: 2.0279931337198143
[2025-07-29 07:16:26] 2025-07-29 07:16:06,838 | INFO     | sum of square deviations: 2632132208.2892165
[2025-07-29 07:16:26] 2025-07-29 07:16:06,838 | INFO     | sum of deviations: 37870406650.09317
[2025-07-29 07:16:26] 2025-07-29 07:16:06,838 | INFO     | mean x: 1753766837.6813726
[2025-07-29 07:16:26] 2025-07-29 07:16:06,839 | INFO     | mean y: 2668255.524509804
[2025-07-29 07:16:26] 2025-07-29 07:16:06,839 | INFO     | -- intersect: -25230054896.937977
[2025-07-29 07:16:26] 2025-07-29 07:16:06,839 | INFO     | intersect: -25230054896.937977
[2025-07-29 07:16:26] 2025-07-29 07:16:06,839 | INFO     | chi2: 2.029497735680821
[2025-07-29 07:16:26] 2025-07-29 07:16:06,839 | INFO     | current chi2=2.029497735680821 (change=-0.07419166938927226 %)
[2025-07-29 07:16:26] 2025-07-29 07:16:06,839 | INFO     | right removable region: 203
[2025-07-29 07:16:26] 2025-07-29 07:16:06,839 | INFO     | sum of square deviations: 2632109638.2892165
[2025-07-29 07:16:26] 2025-07-29 07:16:06,840 | INFO     | sum of deviations: -5240325436.132359
[2025-07-29 07:16:26] 2025-07-29 07:16:06,840 | INFO     | mean x: 1753767142.6813726
[2025-07-29 07:16:26] 2025-07-29 07:16:06,840 | INFO     | mean y: 2703205.044117647
[2025-07-29 07:16:26] 2025-07-29 07:16:06,840 | INFO     | -- intersect: 3494317092.6858797
[2025-07-29 07:16:26] 2025-07-29 07:16:06,840 | INFO     | intersect: 3494317092.6858797
[2025-07-29 07:16:26] 2025-07-29 07:16:06,840 | INFO     | chi2: 0.14895641659993936
[2025-07-29 07:16:26] 2025-07-29 07:16:06,840 | INFO     | current chi2=0.14895641659993936 (change=92.65498417508356 %)
[2025-07-29 07:16:26] 2025-07-29 07:16:06,840 | INFO     | sum of square deviations: 2443238998.1205935
[2025-07-29 07:16:26] 2025-07-29 07:16:06,841 | INFO     | sum of deviations: -13599387057.45728
[2025-07-29 07:16:26] 2025-07-29 07:16:06,841 | INFO     | mean x: 1753767295.1859295
[2025-07-29 07:16:26] 2025-07-29 07:16:06,841 | INFO     | mean y: 2709914.336683417
[2025-07-29 07:16:26] 2025-07-29 07:16:06,841 | INFO     | -- intersect: 9764407510.965416
[2025-07-29 07:16:26] 2025-07-29 07:16:06,841 | INFO     | intersect: 9764407510.965416
[2025-07-29 07:16:26] 2025-07-29 07:16:06,841 | INFO     | chi2: 0.07071094942221369
[2025-07-29 07:16:26] 2025-07-29 07:16:06,841 | INFO     | current chi2=0.07071094942221369 (change=52.52910144037227 %)
[2025-07-29 07:16:26] 2025-07-29 07:16:06,841 | INFO     | sum of square deviations: 2263624345.4433026
[2025-07-29 07:16:26] 2025-07-29 07:16:06,842 | INFO     | sum of deviations: -10603246050.494846
[2025-07-29 07:16:26] 2025-07-29 07:16:06,842 | INFO     | mean x: 1753767447.6907218
[2025-07-29 07:16:26] 2025-07-29 07:16:06,842 | INFO     | mean y: 2707364.3917525774
[2025-07-29 07:16:26] 2025-07-29 07:16:06,842 | INFO     | -- intersect: 8217686939.357999
[2025-07-29 07:16:26] 2025-07-29 07:16:06,842 | INFO     | intersect: 8217686939.357999
[2025-07-29 07:16:26] 2025-07-29 07:16:06,842 | INFO     | chi2: 0.06755954738372727
[2025-07-29 07:16:26] 2025-07-29 07:16:06,842 | INFO     | current chi2=0.06755954738372727 (change=4.456738403651548 %)
[2025-07-29 07:16:26] 2025-07-29 07:16:06,842 | INFO     | left removable region: 30
[2025-07-29 07:16:26] 2025-07-29 07:16:06,842 | INFO     | sum of square deviations: 1605096801.0867102
[2025-07-29 07:16:26] 2025-07-29 07:16:06,843 | INFO     | sum of deviations: 2909046316.190751
[2025-07-29 07:16:26] 2025-07-29 07:16:06,843 | INFO     | mean x: 1753767722.213873
[2025-07-29 07:16:26] 2025-07-29 07:16:06,843 | INFO     | mean y: 2693458.670520231
[2025-07-29 07:16:26] 2025-07-29 07:16:06,843 | INFO     | -- intersect: -3175801151.938889
[2025-07-29 07:16:26] 2025-07-29 07:16:06,843 | INFO     | intersect: -3175801151.938889
[2025-07-29 07:16:26] 2025-07-29 07:16:06,843 | INFO     | chi2: 0.018296483024657563
[2025-07-29 07:16:26] 2025-07-29 07:16:06,843 | INFO     | -- intersect: -3175801151.938889
[2025-07-29 07:16:26] 2025-07-29 07:16:06,843 | INFO     | current memory leak: 1.81 B/s (using 173 data points, chi2=0.02)
[2025-07-29 07:16:26] 2025-07-29 07:16:06,843 | INFO     | could have reported an average CPU frequency of 2785 MHz (10 samples)
[2025-07-29 07:16:26] 2025-07-29 07:16:06,844 | INFO     | ..............................
[2025-07-29 07:16:26] 2025-07-29 07:16:06,844 | INFO     | . Timing measurements:
[2025-07-29 07:16:26] 2025-07-29 07:16:06,844 | INFO     | . get job = 0 s
[2025-07-29 07:16:26] 2025-07-29 07:16:06,844 | INFO     | . initial setup = 1 s
[2025-07-29 07:16:26] 2025-07-29 07:16:06,844 | INFO     | . payload setup = 2 s
[2025-07-29 07:16:26] 2025-07-29 07:16:06,844 | INFO     | . stage-in = 0 s
[2025-07-29 07:16:26] 2025-07-29 07:16:06,844 | INFO     | . payload execution = 12716 s
[2025-07-29 07:16:26] 2025-07-29 07:16:06,844 | INFO     | . stage-out = 0 s
[2025-07-29 07:16:26] 2025-07-29 07:16:06,844 | INFO     | . log creation = 0 s
[2025-07-29 07:16:26] 2025-07-29 07:16:06,844 | INFO     | ..............................
[2025-07-29 07:16:26] 2025-07-29 07:16:06,881 | INFO     | 
[2025-07-29 07:16:26] 2025-07-29 07:16:06,882 | INFO     | job summary report
[2025-07-29 07:16:26] 2025-07-29 07:16:06,882 | INFO     | --------------------------------------------------
[2025-07-29 07:16:26] 2025-07-29 07:16:06,882 | INFO     | PanDA job id: 6745056227
[2025-07-29 07:16:26] 2025-07-29 07:16:06,882 | INFO     | task id: 45743349
[2025-07-29 07:16:26] 2025-07-29 07:16:06,882 | INFO     | errors: (none)
[2025-07-29 07:16:26] 2025-07-29 07:16:06,882 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-29 07:16:26] 2025-07-29 07:16:06,882 | INFO     | pilot state: finished 
[2025-07-29 07:16:26] 2025-07-29 07:16:06,882 | INFO     | transexitcode: 0
[2025-07-29 07:16:26] 2025-07-29 07:16:06,882 | INFO     | exeerrorcode: 0
[2025-07-29 07:16:26] 2025-07-29 07:16:06,882 | INFO     | exeerrordiag: 
[2025-07-29 07:16:26] 2025-07-29 07:16:06,882 | INFO     | exitcode: 0
[2025-07-29 07:16:26] 2025-07-29 07:16:06,882 | INFO     | exitmsg: OK
[2025-07-29 07:16:26] 2025-07-29 07:16:06,882 | INFO     | cpuconsumptiontime: 48890 s
[2025-07-29 07:16:26] 2025-07-29 07:16:06,882 | INFO     | nevents: 400
[2025-07-29 07:16:26] 2025-07-29 07:16:06,882 | INFO     | neventsw: 0
[2025-07-29 07:16:26] 2025-07-29 07:16:06,882 | INFO     | pid: 1786683
[2025-07-29 07:16:26] 2025-07-29 07:16:06,882 | INFO     | pgrp: 1786683
[2025-07-29 07:16:26] 2025-07-29 07:16:06,882 | INFO     | corecount: 12
[2025-07-29 07:16:26] 2025-07-29 07:16:06,882 | INFO     | event service: False
[2025-07-29 07:16:26] 2025-07-29 07:16:06,882 | INFO     | sizes: {0: 2391930, 3: 2392192, 11: 2392220, 12722: 2422200, 12723: 2431300, 12726: 2431438}
[2025-07-29 07:16:26] 2025-07-29 07:16:06,882 | INFO     | --------------------------------------------------
[2025-07-29 07:16:26] 2025-07-29 07:16:06,882 | INFO     | 
[2025-07-29 07:16:26] 2025-07-29 07:16:06,882 | INFO     | executing command: ls -lF /opt/boinc/instance_homes/boinc_31417/slots/1
[2025-07-29 07:16:26] 2025-07-29 07:16:06,891 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-29 07:16:26] 2025-07-29 07:16:06,891 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-29 07:16:26] 2025-07-29 07:16:06,891 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-29 07:16:26] 2025-07-29 07:16:06,891 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-29 07:16:26] 2025-07-29 07:16:06,891 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-29 07:16:26] 2025-07-29 07:16:06,891 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-29 07:16:26] 2025-07-29 07:16:06,891 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-29 07:16:26] 2025-07-29 07:16:06,891 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-29 07:16:26] 2025-07-29 07:16:06,891 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-29 07:16:26] 2025-07-29 07:16:06,891 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-29 07:16:26] 2025-07-29 07:16:06,891 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-29 07:16:26] 2025-07-29 07:16:06,891 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-29 07:16:26] 2025-07-29 07:16:06,891 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-29 07:16:26] 2025-07-29 07:16:06,891 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-29 07:16:26] 2025-07-29 07:16:06,891 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-29 07:16:26] 2025-07-29 07:16:06,891 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-29 07:16:26] 2025-07-29 07:16:06,892 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-29 07:16:26] 2025-07-29 07:16:06,892 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-29 07:16:26] 2025-07-29 07:16:06,892 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-29 07:16:26] 2025-07-29 07:16:06,892 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-29 07:16:26] 2025-07-29 07:16:06,892 | INFO     | job 6745056227 has completed (purged errors)
[2025-07-29 07:16:26] 2025-07-29 07:16:06,892 | INFO     | overall cleanup function is called
[2025-07-29 07:16:26] 2025-07-29 07:16:07,898 | INFO     | --- collectZombieJob: --- 10, [1786683]
[2025-07-29 07:16:26] 2025-07-29 07:16:07,898 | INFO     | zombie collector waiting for pid 1786683
[2025-07-29 07:16:26] 2025-07-29 07:16:07,900 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-29 07:16:26] 2025-07-29 07:16:07,900 | INFO     | collected zombie processes
[2025-07-29 07:16:26] 2025-07-29 07:16:07,900 | INFO     | will attempt to kill all subprocesses of pid=1786683
[2025-07-29 07:16:26] 2025-07-29 07:16:07,930 | INFO     | process IDs to be killed: [1786683] (in reverse order)
[2025-07-29 07:16:26] 2025-07-29 07:16:07,947 | WARNING  | found no corresponding commands to process id(s)
[2025-07-29 07:16:26] 2025-07-29 07:16:07,947 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-29 07:16:26] 2025-07-29 07:16:07,948 | INFO     | did not find any defunct processes belonging to 1786683
[2025-07-29 07:16:26] 2025-07-29 07:16:07,949 | INFO     | did not find any defunct processes belonging to 1786683
[2025-07-29 07:16:26] 2025-07-29 07:16:07,949 | INFO     | ready for new job
[2025-07-29 07:16:26] 2025-07-29 07:16:07,949 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-29 07:16:26] 2025-07-29 07:16:07,950 | INFO     | ***************************************
[2025-07-29 07:16:26] 2025-07-29 07:16:07,950 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-29 07:16:26] 2025-07-29 07:16:07,950 | INFO     | ***************************************
[2025-07-29 07:16:26] 2025-07-29 07:16:07,950 | INFO     | 
[2025-07-29 07:16:26] 2025-07-29 07:16:07,967 | INFO     | architecture information:
[2025-07-29 07:16:26] 2025-07-29 07:16:07,967 | INFO     | executing command: cat /etc/os-release
[2025-07-29 07:16:26] 2025-07-29 07:16:07,973 | INFO     | cat /etc/os-release:
[2025-07-29 07:16:26] NAME="CentOS Linux"
[2025-07-29 07:16:26] VERSION="7 (Core)"
[2025-07-29 07:16:26] ID="centos"
[2025-07-29 07:16:26] ID_LIKE="rhel fedora"
[2025-07-29 07:16:26] VERSION_ID="7"
[2025-07-29 07:16:26] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-29 07:16:26] ANSI_COLOR="0;31"
[2025-07-29 07:16:26] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-29 07:16:26] HOME_URL="https://www.centos.org/"
[2025-07-29 07:16:26] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-29 07:16:26] 
[2025-07-29 07:16:26] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-29 07:16:26] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-29 07:16:26] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-29 07:16:26] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-29 07:16:26] 
[2025-07-29 07:16:26] 2025-07-29 07:16:07,973 | INFO     | ***************************************
[2025-07-29 07:16:26] 2025-07-29 07:16:08,475 | INFO     | executing command: df -mP /opt/boinc/instance_homes/boinc_31417/slots/1
[2025-07-29 07:16:26] 2025-07-29 07:16:08,482 | INFO     | sufficient remaining disk space (27052212224 B)
[2025-07-29 07:16:26] 2025-07-29 07:16:08,482 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-29 07:16:26] 2025-07-29 07:16:08,482 | INFO     | current server update state: UPDATING_FINAL
[2025-07-29 07:16:26] 2025-07-29 07:16:08,482 | INFO     | update_server=False
[2025-07-29 07:16:26] 2025-07-29 07:16:08,483 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-29 07:16:26] 2025-07-29 07:16:08,483 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-29 07:16:26] 2025-07-29 07:16:08,483 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-07-29 07:16:26] 2025-07-29 07:16:08,483 | INFO     | found 0 job(s) in 20 queues
[2025-07-29 07:16:26] 2025-07-29 07:16:08,483 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-29 07:16:26] 2025-07-29 07:16:08,483 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-29 07:16:26] 2025-07-29 07:16:08,670 | INFO     | all payload control threads have been joined
[2025-07-29 07:16:26] 2025-07-29 07:16:08,794 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-29 07:16:26] 2025-07-29 07:16:08,794 | INFO     | aborting loop
[2025-07-29 07:16:26] 2025-07-29 07:16:09,315 | INFO     | all data control threads have been joined
[2025-07-29 07:16:26] 2025-07-29 07:16:09,371 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-29 07:16:26] 2025-07-29 07:16:09,487 | INFO     | [job] queue monitor thread has finished
[2025-07-29 07:16:26] 2025-07-29 07:16:09,487 | INFO     | [job] retrieve thread has finished
[2025-07-29 07:16:26] 2025-07-29 07:16:09,606 | INFO     | [payload] validate_pre thread has finished
[2025-07-29 07:16:26] 2025-07-29 07:16:09,675 | INFO     | [payload] control thread has finished
[2025-07-29 07:16:26] 2025-07-29 07:16:09,699 | INFO     | [job] validate thread has finished
[2025-07-29 07:16:26] 2025-07-29 07:16:09,716 | INFO     | [job] create_data_payload thread has finished
[2025-07-29 07:16:26] 2025-07-29 07:16:09,799 | INFO     | [job] job monitor thread has finished
[2025-07-29 07:16:26] 2025-07-29 07:16:09,799 | INFO     | [payload] execute_payloads thread has finished
[2025-07-29 07:16:26] 2025-07-29 07:16:09,809 | INFO     | all job control threads have been joined
[2025-07-29 07:16:26] 2025-07-29 07:16:09,902 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-29 07:16:26] 2025-07-29 07:16:10,242 | INFO     | [payload] validate_post thread has finished
[2025-07-29 07:16:26] 2025-07-29 07:16:10,320 | INFO     | [data] control thread has finished
[2025-07-29 07:16:26] 2025-07-29 07:16:10,527 | INFO     | [payload] failed_post thread has finished
[2025-07-29 07:16:26] 2025-07-29 07:16:10,761 | INFO     | [data] copytool_in thread has finished
[2025-07-29 07:16:26] 2025-07-29 07:16:10,815 | INFO     | [job] control thread has finished
[2025-07-29 07:16:26] 2025-07-29 07:16:11,376 | INFO     | [data] copytool_out thread has finished
[2025-07-29 07:16:26] 2025-07-29 07:16:13,908 | INFO     | [data] queue_monitor thread has finished
[2025-07-29 07:16:26] 2025-07-29 07:16:18,563 | INFO     | job.realtimelogging is not enabled
[2025-07-29 07:16:26] 2025-07-29 07:16:19,568 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-29 07:16:26] 2025-07-29 07:16:21,136 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139872239863616)>', '<ExcThread(monitor, started 139871515571968)>']
[2025-07-29 07:16:26] 2025-07-29 07:16:21,542 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-29 07:16:26] 2025-07-29 07:16:21,542 | INFO     | [monitor] control thread has ended
[2025-07-29 07:16:26] 2025-07-29 07:16:26,148 | INFO     | all workflow threads have been joined
[2025-07-29 07:16:26] 2025-07-29 07:16:26,148 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-29 07:16:26] 2025-07-29 07:16:26,149 | INFO     | traces error code: 0
[2025-07-29 07:16:26] 2025-07-29 07:16:26,149 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-29 07:16:26] 2025-07-29 07:16:26,203 [wrapper] ==== pilot stdout END ====
[2025-07-29 07:16:26] 2025-07-29 07:16:26,205 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-29 07:16:26] 2025-07-29 07:16:26,206 [wrapper] pilotpid: 1780171
[2025-07-29 07:16:26] 2025-07-29 07:16:26,207 [wrapper] Pilot exit status: 0
[2025-07-29 07:16:26] 2025-07-29 07:16:26,212 [wrapper] pandaids: 6745056227
[2025-07-29 07:16:26] 2025-07-29 07:16:26,221 [wrapper] cleanup supervisor_pilot 1829036 1780172
[2025-07-29 07:16:26] 2025-07-29 07:16:26,223 [wrapper] Test setup, not cleaning
[2025-07-29 07:16:26] 2025-07-29 07:16:26,224 [wrapper] apfmon messages muted
[2025-07-29 07:16:26] 2025-07-29 07:16:26,225 [wrapper] ==== wrapper stdout END ====
[2025-07-29 07:16:26] 2025-07-29 07:16:26,226 [wrapper] ==== wrapper stderr END ====
[2025-07-29 07:16:26]  *** Error codes and diagnostics ***
[2025-07-29 07:16:26]     "exeErrorCode": 0,
[2025-07-29 07:16:26]     "exeErrorDiag": "",
[2025-07-29 07:16:26]     "pilotErrorCode": 0,
[2025-07-29 07:16:26]     "pilotErrorDiag": "",
[2025-07-29 07:16:26]  *** Listing of results directory ***
[2025-07-29 07:16:26] total 437112
[2025-07-29 07:16:26] -rw-r--r-- 1 boinc boinc    530466 Jul 25 14:24 pilot3.tar.gz
[2025-07-29 07:16:26] -rw-r--r-- 1 boinc boinc      5112 Jul 25 14:28 queuedata.json
[2025-07-29 07:16:26] -rwx------ 1 boinc boinc     36292 Jul 25 14:29 runpilot2-wrapper.sh
[2025-07-29 07:16:26] -rw-rw-r-- 1 boinc boinc       100 Jul 29 03:43 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-29 07:16:26] -rwxr-xr-x 1 boinc boinc      7986 Jul 29 03:43 run_atlas
[2025-07-29 07:16:26] -rw-rw-r-- 1 boinc boinc       105 Jul 29 03:43 job.xml
[2025-07-29 07:16:26] -rw-rw-r-- 1 boinc boinc      9357 Jul 29 03:43 init_data.xml
[2025-07-29 07:16:26] -rw-r--r-- 2 boinc boinc 228960986 Jul 29 03:43 EVNT.45743347._001269.pool.root.1
[2025-07-29 07:16:26] drwxrwx--x 2 boinc boinc      4096 Jul 29 03:43 shared
[2025-07-29 07:16:26] -rw-r--r-- 2 boinc boinc    542889 Jul 29 03:43 input.tar.gz
[2025-07-29 07:16:26] -rw-r--r-- 2 boinc boinc     15095 Jul 29 03:43 start_atlas.sh
[2025-07-29 07:16:26] -rw-rw-r-- 1 boinc boinc         0 Jul 29 03:43 boinc_lockfile
[2025-07-29 07:16:26] -rw-rw-r-- 1 boinc boinc      2562 Jul 29 03:43 pandaJob.out
[2025-07-29 07:16:26] -rw------- 1 boinc boinc    977332 Jul 29 03:43 agis_schedconf.cvmfs.json
[2025-07-29 07:16:26] drwx------ 4 boinc boinc      4096 Jul 29 03:43 pilot3
[2025-07-29 07:16:26] -rw------- 1 boinc boinc        96 Jul 29 07:15 pilot_heartbeat.json
[2025-07-29 07:16:26] -rw------- 1 boinc boinc 211452674 Jul 29 07:15 HITS.45743349._022381.pool.root.1
[2025-07-29 07:16:26] -rw-rw-r-- 1 boinc boinc       530 Jul 29 07:15 boinc_task_state.xml
[2025-07-29 07:16:26] -rw------- 1 boinc boinc      1020 Jul 29 07:15 memory_monitor_summary.json
[2025-07-29 07:16:26] -rw------- 1 boinc boinc   1589827 Jul 29 07:16 agis_ddmendpoints.agis.ALL.json
[2025-07-29 07:16:26] -rw------- 1 boinc boinc    447357 Jul 29 07:16 log.45743349._022381.job.log.tgz.1
[2025-07-29 07:16:26] -rw------- 1 boinc boinc      7760 Jul 29 07:16 heartbeat.json
[2025-07-29 07:16:26] -rw-rw-r-- 1 boinc boinc      8192 Jul 29 07:16 boinc_mmap_file
[2025-07-29 07:16:26] -rw-rw-r-- 1 boinc boinc        28 Jul 29 07:16 wrapper_checkpoint.txt
[2025-07-29 07:16:26] -rw------- 1 boinc boinc      4575 Jul 29 07:16 pilotlog.txt
[2025-07-29 07:16:26] -rw------- 1 boinc boinc   1204321 Jul 29 07:16 log.45743349._022381.job.log.1
[2025-07-29 07:16:26] -rw------- 1 boinc boinc       357 Jul 29 07:16 output.list
[2025-07-29 07:16:26] -rw-rw-r-- 1 boinc boinc       620 Jul 29 07:16 runtime_log
[2025-07-29 07:16:26] -rw------- 1 boinc boinc   1669120 Jul 29 07:16 result.tar.gz
[2025-07-29 07:16:26] -rw------- 1 boinc boinc       652 Jul 29 07:16 wihNDmtbYz7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmrjPLDmUQo6Tn.diag
[2025-07-29 07:16:26] -rw-rw-r-- 1 boinc boinc      8950 Jul 29 07:16 runtime_log.err
[2025-07-29 07:16:26] -rw-rw-r-- 1 boinc boinc     20660 Jul 29 07:16 stderr.txt
[2025-07-29 07:16:26] HITS file was successfully produced:
[2025-07-29 07:16:26] -rw------- 1 boinc boinc 211452674 Jul 29 07:15 shared/HITS.pool.root.1
[2025-07-29 07:16:26]  *** Contents of shared directory: ***
[2025-07-29 07:16:26] total 432284
[2025-07-29 07:16:26] -rw-r--r-- 2 boinc boinc 228960986 Jul 29 03:43 ATLAS.root_0
[2025-07-29 07:16:26] -rw-r--r-- 2 boinc boinc    542889 Jul 29 03:43 input.tar.gz
[2025-07-29 07:16:26] -rw-r--r-- 2 boinc boinc     15095 Jul 29 03:43 start_atlas.sh
[2025-07-29 07:16:26] -rw------- 1 boinc boinc 211452674 Jul 29 07:15 HITS.pool.root.1
[2025-07-29 07:16:26] -rw------- 1 boinc boinc   1669120 Jul 29 07:16 result.tar.gz
07:16:28 (1776526): run_atlas exited; CPU time 48987.830408
07:16:28 (1776526): called boinc_finish(0)

</stderr_txt>
]]>

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