Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
20:04:02 (3711525): wrapper (7.7.26015): starting
20:04:02 (3711525): wrapper: running run_atlas (--nthreads 8)
[2025-07-25 20:04:02] Arguments: --nthreads 8
[2025-07-25 20:04:02] Threads: 8
[2025-07-25 20:04:02] Checking for CVMFS
[2025-07-25 20:04:03] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-25 20:04:03] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-25 20:04:03] Running cvmfs_config stat atlas.cern.ch
[2025-07-25 20:04:05] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-25 20:04:05] 2.12.6.0 3074763 97668 742856 148757 1 161 19436946 32935936 27451 16776704 2 190940142 99.661 221805914 7092 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-07-25 20:04:05] CVMFS is ok
[2025-07-25 20:04:05] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-25 20:04:05] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-25 20:04:05] Further information can be found at the LHC@home message board.
[2025-07-25 20:04:05] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-25 20:04:05] Checking for apptainer binary...
[2025-07-25 20:04:05] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-25 20:04:05] Running /usr/bin/apptainer --version
[2025-07-25 20:04:05] apptainer version 1.4.1-1.el9
[2025-07-25 20:04:05] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-25 20:04:05] c6-12-25-1.aglt2.org
[2025-07-25 20:04:05] apptainer works
[2025-07-25 20:04:06] Set ATHENA_PROC_NUMBER=8
[2025-07-25 20:04:06] Set ATHENA_CORE_NUMBER=8
[2025-07-25 20:04:06] Starting ATLAS job with PandaID=6745059329
[2025-07-25 20:04:06] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-26 15:33:31]  *** The last 200 lines of the pilot log: ***
[2025-07-26 15:33:31] 2025-07-26 19:32:18,901 | INFO     | fitting pss+swap vs Time
[2025-07-26 15:33:31] 2025-07-26 19:32:18,924 | INFO     | sum of square deviations: 465469817807.6713
[2025-07-26 15:33:31] 2025-07-26 19:32:19,292 | INFO     | sum of deviations: -110318002089.58131
[2025-07-26 15:33:31] 2025-07-26 19:32:19,293 | INFO     | mean x: 1753523319.634061
[2025-07-26 15:33:31] 2025-07-26 19:32:19,307 | INFO     | mean y: 2068300.2969432315
[2025-07-26 15:33:31] 2025-07-26 19:32:19,307 | INFO     | -- intersect: 417659562.79948866
[2025-07-26 15:33:31] 2025-07-26 19:32:19,322 | INFO     | intersect: 417659562.79948866
[2025-07-26 15:33:31] 2025-07-26 19:32:19,340 | INFO     | chi2: 7.1478254763261155
[2025-07-26 15:33:31] 2025-07-26 19:32:19,374 | INFO     | sum of square deviations: 459399005015.54395
[2025-07-26 15:33:31] 2025-07-26 19:32:19,704 | INFO     | sum of deviations: 130537882752.94765
[2025-07-26 15:33:31] 2025-07-26 19:32:19,705 | INFO     | mean x: 1753523167.1403508
[2025-07-26 15:33:31] 2025-07-26 19:32:19,705 | INFO     | mean y: 2074345.9815789473
[2025-07-26 15:33:31] 2025-07-26 19:32:19,715 | INFO     | -- intersect: -496187946.92216724
[2025-07-26 15:33:31] 2025-07-26 19:32:19,716 | INFO     | intersect: -496187946.92216724
[2025-07-26 15:33:31] 2025-07-26 19:32:19,738 | INFO     | chi2: 4.514644304429081
[2025-07-26 15:33:31] 2025-07-26 19:32:19,739 | INFO     | current chi2=4.514644304429081 (change=36.83891248629722 %)
[2025-07-26 15:33:31] 2025-07-26 19:32:19,768 | INFO     | sum of square deviations: 453381007372.19653
[2025-07-26 15:33:31] 2025-07-26 19:32:19,960 | INFO     | sum of deviations: 178154874415.3932
[2025-07-26 15:33:31] 2025-07-26 19:32:19,965 | INFO     | mean x: 1753523014.644053
[2025-07-26 15:33:31] 2025-07-26 19:32:19,965 | INFO     | mean y: 2075552.184140969
[2025-07-26 15:33:31] 2025-07-26 19:32:19,965 | INFO     | -- intersect: -686966704.5020854
[2025-07-26 15:33:31] 2025-07-26 19:32:19,966 | INFO     | intersect: -686966704.5020854
[2025-07-26 15:33:31] 2025-07-26 19:32:19,976 | INFO     | chi2: 4.42071539323449
[2025-07-26 15:33:31] 2025-07-26 19:32:19,976 | INFO     | current chi2=4.42071539323449 (change=2.0805384624087035 %)
[2025-07-26 15:33:31] 2025-07-26 19:32:19,976 | INFO     | right removable region: 1134
[2025-07-26 15:33:31] 2025-07-26 19:32:20,008 | INFO     | sum of square deviations: 459397933304.2622
[2025-07-26 15:33:31] 2025-07-26 19:32:20,159 | INFO     | sum of deviations: -340466816693.05444
[2025-07-26 15:33:31] 2025-07-26 19:32:20,159 | INFO     | mean x: 1753523472.141228
[2025-07-26 15:33:31] 2025-07-26 19:32:20,160 | INFO     | mean y: 2074076.1245614034
[2025-07-26 15:33:31] 2025-07-26 19:32:20,160 | INFO     | -- intersect: 1301637072.114506
[2025-07-26 15:33:31] 2025-07-26 19:32:20,165 | INFO     | intersect: 1301637072.114506
[2025-07-26 15:33:31] 2025-07-26 19:32:20,169 | INFO     | chi2: 4.838303566752388
[2025-07-26 15:33:31] 2025-07-26 19:32:20,169 | INFO     | current chi2=4.838303566752388 (change=32.3108323954321 %)
[2025-07-26 15:33:31] 2025-07-26 19:32:20,200 | INFO     | sum of square deviations: 453379142349.03125
[2025-07-26 15:33:31] 2025-07-26 19:32:20,536 | INFO     | monitor loop #2030: job 0:6745059329 is in state 'finished'
[2025-07-26 15:33:31] 2025-07-26 19:32:20,584 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-26 15:33:31] 2025-07-26 19:32:20,685 | INFO     | sum of deviations: -480784131242.97375
[2025-07-26 15:33:31] 2025-07-26 19:32:20,685 | INFO     | mean x: 1753523624.647577
[2025-07-26 15:33:31] 2025-07-26 19:32:20,686 | INFO     | mean y: 2077631.3550660792
[2025-07-26 15:33:31] 2025-07-26 19:32:20,686 | INFO     | -- intersect: 1861594873.6396396
[2025-07-26 15:33:31] 2025-07-26 19:32:20,686 | INFO     | intersect: 1861594873.6396396
[2025-07-26 15:33:31] 2025-07-26 19:32:20,694 | INFO     | chi2: 4.044716267985364
[2025-07-26 15:33:31] 2025-07-26 19:32:20,695 | INFO     | current chi2=4.044716267985364 (change=16.402180801972772 %)
[2025-07-26 15:33:31] 2025-07-26 19:32:20,695 | INFO     | left removable region: 20
[2025-07-26 15:33:31] 2025-07-26 19:32:20,744 | INFO     | sum of square deviations: 428676626639.5918
[2025-07-26 15:33:31] 2025-07-26 19:32:21,170 | INFO     | sum of deviations: -274051344888.20236
[2025-07-26 15:33:31] 2025-07-26 19:32:21,171 | INFO     | mean x: 1753523594.1624775
[2025-07-26 15:33:31] 2025-07-26 19:32:21,188 | INFO     | mean y: 2088012.421005386
[2025-07-26 15:33:31] 2025-07-26 19:32:21,189 | INFO     | -- intersect: 1123109009.1581252
[2025-07-26 15:33:31] 2025-07-26 19:32:21,189 | INFO     | intersect: 1123109009.1581252
[2025-07-26 15:33:31] 2025-07-26 19:32:21,215 | INFO     | chi2: 0.9238658697214454
[2025-07-26 15:33:31] 2025-07-26 19:32:21,233 | INFO     | -- intersect: 1123109009.1581252
[2025-07-26 15:33:31] 2025-07-26 19:32:21,233 | INFO     | current memory leak: -0.64 B/s (using 1114 data points, chi2=0.92)
[2025-07-26 15:33:31] 2025-07-26 19:32:21,242 | INFO     | could have reported an average CPU frequency of 999 MHz (41 samples)
[2025-07-26 15:33:31] 2025-07-26 19:32:21,242 | INFO     | ..............................
[2025-07-26 15:33:31] 2025-07-26 19:32:21,243 | INFO     | . Timing measurements:
[2025-07-26 15:33:31] 2025-07-26 19:32:21,243 | INFO     | . get job = 0 s
[2025-07-26 15:33:31] 2025-07-26 19:32:21,243 | INFO     | . initial setup = 5 s
[2025-07-26 15:33:31] 2025-07-26 19:32:21,243 | INFO     | . payload setup = 35 s
[2025-07-26 15:33:31] 2025-07-26 19:32:21,244 | INFO     | . stage-in = 0 s
[2025-07-26 15:33:31] 2025-07-26 19:32:21,244 | INFO     | . payload execution = 69853 s
[2025-07-26 15:33:31] 2025-07-26 19:32:21,244 | INFO     | . stage-out = 16 s
[2025-07-26 15:33:31] 2025-07-26 19:32:21,244 | INFO     | . log creation = 2 s
[2025-07-26 15:33:31] 2025-07-26 19:32:21,268 | INFO     | ..............................
[2025-07-26 15:33:31] 2025-07-26 19:32:22,452 | INFO     | 
[2025-07-26 15:33:31] 2025-07-26 19:32:22,452 | INFO     | job summary report
[2025-07-26 15:33:31] 2025-07-26 19:32:22,452 | INFO     | --------------------------------------------------
[2025-07-26 15:33:31] 2025-07-26 19:32:22,453 | INFO     | PanDA job id: 6745059329
[2025-07-26 15:33:31] 2025-07-26 19:32:22,453 | INFO     | task id: 45743349
[2025-07-26 15:33:31] 2025-07-26 19:32:22,453 | INFO     | errors: (none)
[2025-07-26 15:33:31] 2025-07-26 19:32:22,453 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-26 15:33:31] 2025-07-26 19:32:22,453 | INFO     | pilot state: finished 
[2025-07-26 15:33:31] 2025-07-26 19:32:22,454 | INFO     | transexitcode: 0
[2025-07-26 15:33:31] 2025-07-26 19:32:22,454 | INFO     | exeerrorcode: 0
[2025-07-26 15:33:31] 2025-07-26 19:32:22,454 | INFO     | exeerrordiag: 
[2025-07-26 15:33:31] 2025-07-26 19:32:22,454 | INFO     | exitcode: 0
[2025-07-26 15:33:31] 2025-07-26 19:32:22,454 | INFO     | exitmsg: OK
[2025-07-26 15:33:31] 2025-07-26 19:32:22,455 | INFO     | cpuconsumptiontime: 132496 s
[2025-07-26 15:33:31] 2025-07-26 19:32:22,455 | INFO     | nevents: 400
[2025-07-26 15:33:31] 2025-07-26 19:32:22,455 | INFO     | neventsw: 0
[2025-07-26 15:33:31] 2025-07-26 19:32:22,455 | INFO     | pid: 3739578
[2025-07-26 15:33:31] 2025-07-26 19:32:22,464 | INFO     | pgrp: 3739578
[2025-07-26 15:33:31] 2025-07-26 19:32:22,464 | INFO     | corecount: 8
[2025-07-26 15:33:31] 2025-07-26 19:32:22,464 | INFO     | event service: False
[2025-07-26 15:33:31] 2025-07-26 19:32:22,465 | INFO     | sizes: {0: 2396594, 1: 2397279, 2: 2397307, 3: 2397478, 4: 2397506, 15: 2397534, 26: 2397690, 29: 2397980, 38: 2398008, 69897: 2448363, 69899: 2448362, 69918: 2457
[2025-07-26 15:33:31] 2025-07-26 19:32:22,465 | INFO     | --------------------------------------------------
[2025-07-26 15:33:31] 2025-07-26 19:32:22,465 | INFO     | 
[2025-07-26 15:33:31] 2025-07-26 19:32:22,465 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-07-26 15:33:31] 2025-07-26 19:32:23,023 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-26 15:33:31] 2025-07-26 19:32:23,024 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-26 15:33:31] 2025-07-26 19:32:23,024 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-26 15:33:31] 2025-07-26 19:32:23,024 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-26 15:33:31] 2025-07-26 19:32:23,025 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-26 15:33:31] 2025-07-26 19:32:23,025 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-26 15:33:31] 2025-07-26 19:32:23,025 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-26 15:33:31] 2025-07-26 19:32:23,025 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-26 15:33:31] 2025-07-26 19:32:23,026 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-26 15:33:31] 2025-07-26 19:32:23,026 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-26 15:33:31] 2025-07-26 19:32:23,026 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-26 15:33:31] 2025-07-26 19:32:23,026 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-26 15:33:31] 2025-07-26 19:32:23,046 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-26 15:33:31] 2025-07-26 19:32:23,046 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-26 15:33:31] 2025-07-26 19:32:23,046 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-26 15:33:31] 2025-07-26 19:32:23,047 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-26 15:33:31] 2025-07-26 19:32:23,047 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-26 15:33:31] 2025-07-26 19:32:23,047 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-26 15:33:31] 2025-07-26 19:32:23,047 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-26 15:33:31] 2025-07-26 19:32:23,048 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-26 15:33:31] 2025-07-26 19:32:23,048 | INFO     | job 6745059329 has completed (purged errors)
[2025-07-26 15:33:31] 2025-07-26 19:32:23,049 | INFO     | overall cleanup function is called
[2025-07-26 15:33:31] 2025-07-26 19:32:24,089 | INFO     | --- collectZombieJob: --- 10, [3739578]
[2025-07-26 15:33:31] 2025-07-26 19:32:24,090 | INFO     | zombie collector waiting for pid 3739578
[2025-07-26 15:33:31] 2025-07-26 19:32:24,090 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-26 15:33:31] 2025-07-26 19:32:24,091 | INFO     | collected zombie processes
[2025-07-26 15:33:31] 2025-07-26 19:32:24,091 | INFO     | will attempt to kill all subprocesses of pid=3739578
[2025-07-26 15:33:31] 2025-07-26 19:32:38,391 | INFO     | process IDs to be killed: [3739578] (in reverse order)
[2025-07-26 15:33:31] 2025-07-26 19:32:39,552 | WARNING  | found no corresponding commands to process id(s)
[2025-07-26 15:33:31] 2025-07-26 19:32:39,585 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-26 15:33:31] 2025-07-26 19:32:39,841 | INFO     | did not find any defunct processes belonging to 3739578
[2025-07-26 15:33:31] 2025-07-26 19:32:40,161 | INFO     | did not find any defunct processes belonging to 3739578
[2025-07-26 15:33:31] 2025-07-26 19:32:40,162 | INFO     | ready for new job
[2025-07-26 15:33:31] 2025-07-26 19:32:40,162 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-26 15:33:31] 2025-07-26 19:32:40,190 | INFO     | ***************************************
[2025-07-26 15:33:31] 2025-07-26 19:32:40,190 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-26 15:33:31] 2025-07-26 19:32:40,214 | INFO     | ***************************************
[2025-07-26 15:33:31] 2025-07-26 19:32:40,214 | INFO     | 
[2025-07-26 15:33:31] 2025-07-26 19:32:40,304 | INFO     | architecture information:
[2025-07-26 15:33:31] 2025-07-26 19:32:40,335 | INFO     | executing command: cat /etc/os-release
[2025-07-26 15:33:31] 2025-07-26 19:32:40,576 | INFO     | cat /etc/os-release:
[2025-07-26 15:33:31] NAME="CentOS Linux"
[2025-07-26 15:33:31] VERSION="7 (Core)"
[2025-07-26 15:33:31] ID="centos"
[2025-07-26 15:33:31] ID_LIKE="rhel fedora"
[2025-07-26 15:33:31] VERSION_ID="7"
[2025-07-26 15:33:31] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-26 15:33:31] ANSI_COLOR="0;31"
[2025-07-26 15:33:31] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-26 15:33:31] HOME_URL="https://www.centos.org/"
[2025-07-26 15:33:31] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-26 15:33:31] 
[2025-07-26 15:33:31] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-26 15:33:31] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-26 15:33:31] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-26 15:33:31] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-26 15:33:31] 
[2025-07-26 15:33:31] 2025-07-26 19:32:40,577 | INFO     | ***************************************
[2025-07-26 15:33:31] 2025-07-26 19:32:41,081 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-07-26 15:33:31] 2025-07-26 19:32:41,315 | INFO     | sufficient remaining disk space (72252129280 B)
[2025-07-26 15:33:31] 2025-07-26 19:32:41,316 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-26 15:33:31] 2025-07-26 19:32:41,317 | INFO     | current server update state: UPDATING_FINAL
[2025-07-26 15:33:31] 2025-07-26 19:32:41,317 | INFO     | update_server=False
[2025-07-26 15:33:31] 2025-07-26 19:32:41,317 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-26 15:33:31] 2025-07-26 19:32:41,335 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-07-26 15:33:31] 2025-07-26 19:32:41,336 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-07-26 15:33:31] 2025-07-26 19:32:41,336 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-26 15:33:31] 2025-07-26 19:32:41,337 | INFO     | will abort loop
[2025-07-26 15:33:31] 2025-07-26 19:32:41,542 | INFO     | all payload control threads have been joined
[2025-07-26 15:33:31] 2025-07-26 19:32:41,683 | INFO     | all data control threads have been joined
[2025-07-26 15:33:31] 2025-07-26 19:32:41,804 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-26 15:33:31] 2025-07-26 19:32:42,125 | INFO     | all job control threads have been joined
[2025-07-26 15:33:31] 2025-07-26 19:32:42,330 | INFO     | [job] retrieve thread has finished
[2025-07-26 15:33:31] 2025-07-26 19:32:42,357 | INFO     | [job] job monitor thread has finished
[2025-07-26 15:33:31] 2025-07-26 19:32:42,423 | INFO     | [job] validate thread has finished
[2025-07-26 15:33:31] 2025-07-26 19:32:42,439 | INFO     | [payload] execute_payloads thread has finished
[2025-07-26 15:33:31] 2025-07-26 19:32:42,549 | INFO     | [payload] control thread has finished
[2025-07-26 15:33:31] 2025-07-26 19:32:42,695 | INFO     | [data] control thread has finished
[2025-07-26 15:33:31] 2025-07-26 19:32:42,864 | INFO     | [payload] validate_post thread has finished
[2025-07-26 15:33:31] 2025-07-26 19:32:42,950 | INFO     | [data] copytool_in thread has finished
[2025-07-26 15:33:31] 2025-07-26 19:32:43,132 | INFO     | [job] control thread has finished
[2025-07-26 15:33:31] 2025-07-26 19:32:43,386 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-26 15:33:31] 2025-07-26 19:32:43,392 | INFO     | [payload] validate_pre thread has finished
[2025-07-26 15:33:31] 2025-07-26 19:32:43,393 | INFO     | [payload] failed_post thread has finished
[2025-07-26 15:33:31] 2025-07-26 19:32:43,781 | INFO     | [job] create_data_payload thread has finished
[2025-07-26 15:33:31] 2025-07-26 19:32:43,822 | INFO     | [data] copytool_out thread has finished
[2025-07-26 15:33:31] 2025-07-26 19:32:43,958 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-26 15:33:31] 2025-07-26 19:32:43,965 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-26 15:33:31] 2025-07-26 19:32:44,972 | INFO     | [job] queue monitor thread has finished
[2025-07-26 15:33:31] 2025-07-26 19:32:47,973 | INFO     | [data] queue_monitor thread has finished
[2025-07-26 15:33:31] 2025-07-26 19:32:49,412 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139956155422528)>', '<ExcThread(monitor, started 139954931889920)>']
[2025-07-26 15:33:31] 2025-07-26 19:32:54,437 | INFO     | all workflow threads have been joined
[2025-07-26 15:33:31] 2025-07-26 19:32:54,442 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-26 15:33:31] 2025-07-26 19:32:54,447 | INFO     | traces error code: 0
[2025-07-26 15:33:31] 2025-07-26 19:32:54,448 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-26 15:33:31] 2025-07-26 19:33:03,022 | INFO     | PID=3719018 has CPU usage=9.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-26 15:33:31] 2025-07-26 19:33:03,023 | INFO     | .. there are 48 such processes running
[2025-07-26 15:33:31] 2025-07-26 19:33:03,023 | INFO     | found 0 job(s) in 20 queues
[2025-07-26 15:33:31] 2025-07-26 19:33:03,023 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-26 15:33:31] 2025-07-26 19:33:03,024 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-26 15:33:31] 2025-07-26 19:33:03,024 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-26 15:33:31] 2025-07-26 19:33:03,024 | INFO     | [monitor] control thread has ended
[2025-07-26 15:33:31] 2025-07-26 19:33:09,433 [wrapper] ==== pilot stdout END ====
[2025-07-26 15:33:31] 2025-07-26 19:33:09,458 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-26 15:33:31] 2025-07-26 19:33:09,478 [wrapper] pilotpid: 3719018
[2025-07-26 15:33:31] 2025-07-26 19:33:09,516 [wrapper] Pilot exit status: 0
[2025-07-26 15:33:31] 2025-07-26 19:33:09,665 [wrapper] pandaids: 6745059329
[2025-07-26 15:33:31] 2025-07-26 19:33:10,906 [wrapper] cleanup supervisor_pilot 2738304 3719019
[2025-07-26 15:33:31] 2025-07-26 19:33:10,917 [wrapper] Test setup, not cleaning
[2025-07-26 15:33:31] 2025-07-26 19:33:10,923 [wrapper] apfmon messages muted
[2025-07-26 15:33:31] 2025-07-26 19:33:10,929 [wrapper] ==== wrapper stdout END ====
[2025-07-26 15:33:31] 2025-07-26 19:33:10,935 [wrapper] ==== wrapper stderr END ====
[2025-07-26 15:33:31]  *** Error codes and diagnostics ***
[2025-07-26 15:33:31]     "exeErrorCode": 0,
[2025-07-26 15:33:31]     "exeErrorDiag": "",
[2025-07-26 15:33:31]     "pilotErrorCode": 0,
[2025-07-26 15:33:31]     "pilotErrorDiag": "",
[2025-07-26 15:33:31]  *** Listing of results directory ***
[2025-07-26 15:33:31] total 440584
[2025-07-26 15:33:31] -rw-r--r--. 1 boincer umatlas    530466 Jul 25 13:32 pilot3.tar.gz
[2025-07-26 15:33:31] -rw-r--r--. 1 boincer umatlas      5112 Jul 25 13:47 queuedata.json
[2025-07-26 15:33:31] -rwx------. 1 boincer umatlas     36292 Jul 25 13:47 runpilot2-wrapper.sh
[2025-07-26 15:33:31] -rw-r--r--. 1 boincer umatlas       100 Jul 25 20:03 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-26 15:33:31] -rwxr-xr-x. 1 boincer umatlas      7986 Jul 25 20:03 run_atlas
[2025-07-26 15:33:31] -rw-r--r--. 1 boincer umatlas       105 Jul 25 20:03 job.xml
[2025-07-26 15:33:31] -rw-r--r--. 2 boincer umatlas 228773138 Jul 25 20:04 EVNT.45743347._001402.pool.root.1
[2025-07-26 15:33:31] -rw-r--r--. 2 boincer umatlas    542895 Jul 25 20:04 input.tar.gz
[2025-07-26 15:33:31] drwxrwx--x. 2 boincer umatlas      4096 Jul 25 20:04 shared
[2025-07-26 15:33:31] -rw-r--r--. 2 boincer umatlas     15095 Jul 25 20:04 start_atlas.sh
[2025-07-26 15:33:31] -rw-r--r--. 1 boincer umatlas         0 Jul 25 20:04 boinc_lockfile
[2025-07-26 15:33:31] -rw-r--r--. 1 boincer umatlas      2561 Jul 25 20:04 pandaJob.out
[2025-07-26 15:33:31] -rw-------. 1 boincer umatlas    980001 Jul 25 20:04 agis_schedconf.cvmfs.json
[2025-07-26 15:33:31] drwx------. 4 boincer umatlas      4096 Jul 25 20:04 pilot3
[2025-07-26 15:33:31] -rw-------. 1 boincer umatlas 210285724 Jul 26 15:26 HITS.45743349._024679.pool.root.1
[2025-07-26 15:33:31] -rw-r--r--. 1 boincer umatlas       532 Jul 26 15:26 boinc_task_state.xml
[2025-07-26 15:33:31] -rw-------. 1 boincer umatlas      1053 Jul 26 15:30 memory_monitor_summary.json
[2025-07-26 15:33:31] -rw-------. 1 boincer umatlas   1593052 Jul 26 15:31 agis_ddmendpoints.agis.ALL.json
[2025-07-26 15:33:31] -rw-r--r--. 1 boincer umatlas      6858 Jul 26 15:31 init_data.xml
[2025-07-26 15:33:31] -rw-------. 1 boincer umatlas    712645 Jul 26 15:31 log.45743349._024679.job.log.tgz.1
[2025-07-26 15:33:31] -rw-------. 1 boincer umatlas        96 Jul 26 15:32 pilot_heartbeat.json
[2025-07-26 15:33:31] -rw-------. 1 boincer umatlas      7857 Jul 26 15:32 heartbeat.json
[2025-07-26 15:33:31] -rw-------. 1 boincer umatlas       823 Jul 26 15:33 pilotlog.txt
[2025-07-26 15:33:31] -rw-r--r--. 1 boincer umatlas      8192 Jul 26 15:33 boinc_mmap_file
[2025-07-26 15:33:31] -rw-r--r--. 1 boincer umatlas        29 Jul 26 15:33 wrapper_checkpoint.txt
[2025-07-26 15:33:31] -rw-------. 1 boincer umatlas   3399782 Jul 26 15:33 log.45743349._024679.job.log.1
[2025-07-26 15:33:31] -rw-------. 1 boincer umatlas       357 Jul 26 15:33 output.list
[2025-07-26 15:33:31] -rw-r--r--. 1 boincer umatlas       620 Jul 26 15:33 runtime_log
[2025-07-26 15:33:31] -rw-------. 1 boincer umatlas   4126720 Jul 26 15:33 result.tar.gz
[2025-07-26 15:33:31] -rw-r--r--. 1 boincer umatlas      8671 Jul 26 15:33 runtime_log.err
[2025-07-26 15:33:31] -rw-------. 1 boincer umatlas       667 Jul 26 15:33 B3SNDm6gbz7n9Rq4apOajLDm4fhM0noT9bVof3QYDmHKzKDmFoICCo.diag
[2025-07-26 15:33:31] -rw-r--r--. 1 boincer umatlas     21116 Jul 26 15:33 stderr.txt
[2025-07-26 15:33:31] HITS file was successfully produced:
[2025-07-26 15:33:31] -rw-------. 1 boincer umatlas 210285724 Jul 26 15:26 shared/HITS.pool.root.1
[2025-07-26 15:33:31]  *** Contents of shared directory: ***
[2025-07-26 15:33:31] total 433360
[2025-07-26 15:33:31] -rw-r--r--. 2 boincer umatlas 228773138 Jul 25 20:04 ATLAS.root_0
[2025-07-26 15:33:31] -rw-r--r--. 2 boincer umatlas    542895 Jul 25 20:04 input.tar.gz
[2025-07-26 15:33:31] -rw-r--r--. 2 boincer umatlas     15095 Jul 25 20:04 start_atlas.sh
[2025-07-26 15:33:31] -rw-------. 1 boincer umatlas 210285724 Jul 26 15:26 HITS.pool.root.1
[2025-07-26 15:33:31] -rw-------. 1 boincer umatlas   4126720 Jul 26 15:33 result.tar.gz
15:33:33 (3711525): run_atlas exited; CPU time 138452.393785
15:33:33 (3711525): called boinc_finish(0)

</stderr_txt>
]]>

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