Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
21:48:59 (2429725): wrapper (7.7.26015): starting
21:48:59 (2429725): wrapper: running run_atlas (--nthreads 12)
[2025-07-25 21:48:59] Arguments: --nthreads 12
[2025-07-25 21:48:59] Threads: 12
[2025-07-25 21:48:59] Checking for CVMFS
[2025-07-25 21:49:00] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-25 21:49:00] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-25 21:49:00] Running cvmfs_config stat atlas.cern.ch
[2025-07-25 21:49:01] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-25 21:49:01] 2.12.6.0 951823 16283 297800 148759 0 394 25005021 40960001 19485 16776704 0 37322551 99.707 48856563 27805 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-07-25 21:49:01] CVMFS is ok
[2025-07-25 21:49:01] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-25 21:49:01] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-25 21:49:01] Further information can be found at the LHC@home message board.
[2025-07-25 21:49:01] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-25 21:49:01] Checking for apptainer binary...
[2025-07-25 21:49:01] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-25 21:49:01] Running /usr/bin/apptainer --version
[2025-07-25 21:49:01] apptainer version 1.4.1-1.el9
[2025-07-25 21:49:01] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-25 21:49:21] c6-8-12-3.aglt2.org
[2025-07-25 21:49:21] apptainer works
[2025-07-25 21:49:21] Set ATHENA_PROC_NUMBER=12
[2025-07-25 21:49:21] Set ATHENA_CORE_NUMBER=12
[2025-07-25 21:49:21] Starting ATLAS job with PandaID=6745059282
[2025-07-25 21:49:21] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-26 01:06:16]  *** The last 200 lines of the pilot log: ***
[2025-07-26 01:06:16] 2025-07-26 05:05:40,261 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-26 01:06:16] 2025-07-26 05:05:42,766 | INFO     | monitor loop #688: job 0:6745059282 is in state 'finished'
[2025-07-26 01:06:16] 2025-07-26 05:05:42,766 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-26 01:06:16] 2025-07-26 05:05:43,839 | INFO     | CPU arch script returned: x86-64-v4
[2025-07-26 01:06:16] 2025-07-26 05:05:43,844 | INFO     | found 28 cores (14 cores per socket, 2 sockets) HT, CPU MHz: 2869.5938571428574
[2025-07-26 01:06:16] 2025-07-26 05:05:43,855 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6745059282/memory_monitor_summary.json (trf name=prmon)
[2025-07-26 01:06:16] 2025-07-26 05:05:43,856 | INFO     | extracted standard info from prmon json
[2025-07-26 01:06:16] 2025-07-26 05:05:43,856 | INFO     | extracted standard memory fields from prmon json
[2025-07-26 01:06:16] 2025-07-26 05:05:43,857 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-26 01:06:16] 2025-07-26 05:05:43,857 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-26 01:06:16] 2025-07-26 05:05:43,857 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-26 01:06:16] 2025-07-26 05:05:43,862 | INFO     | fitting pss+swap vs Time
[2025-07-26 01:06:16] 2025-07-26 05:05:43,862 | INFO     | sum of square deviations: 2160378974.3246
[2025-07-26 01:06:16] 2025-07-26 05:05:43,864 | INFO     | sum of deviations: 26645334496.827232
[2025-07-26 01:06:16] 2025-07-26 05:05:43,864 | INFO     | mean x: 1753500510.4136126
[2025-07-26 01:06:16] 2025-07-26 05:05:43,864 | INFO     | mean y: 2323818.9895287957
[2025-07-26 01:06:16] 2025-07-26 05:05:43,864 | INFO     | -- intersect: -21624718563.671547
[2025-07-26 01:06:16] 2025-07-26 05:05:43,864 | INFO     | intersect: -21624718563.671547
[2025-07-26 01:06:16] 2025-07-26 05:05:43,865 | INFO     | chi2: 2.8093156852318737
[2025-07-26 01:06:16] 2025-07-26 05:05:43,865 | INFO     | sum of square deviations: 1995125550.9462361
[2025-07-26 01:06:16] 2025-07-26 05:05:43,867 | INFO     | sum of deviations: 38364552524.6344
[2025-07-26 01:06:16] 2025-07-26 05:05:43,867 | INFO     | mean x: 1753500357.9247313
[2025-07-26 01:06:16] 2025-07-26 05:05:43,867 | INFO     | mean y: 2334409.188172043
[2025-07-26 01:06:16] 2025-07-26 05:05:43,867 | INFO     | -- intersect: -33715972968.341576
[2025-07-26 01:06:16] 2025-07-26 05:05:43,867 | INFO     | intersect: -33715972968.341576
[2025-07-26 01:06:16] 2025-07-26 05:05:43,868 | INFO     | chi2: 2.1299460724066352
[2025-07-26 01:06:16] 2025-07-26 05:05:43,868 | INFO     | current chi2=2.1299460724066352 (change=24.18274373352118 %)
[2025-07-26 01:06:16] 2025-07-26 05:05:43,868 | INFO     | right removable region: 185
[2025-07-26 01:06:16] 2025-07-26 05:05:43,868 | INFO     | sum of square deviations: 1995077360.9462361
[2025-07-26 01:06:16] 2025-07-26 05:05:43,869 | INFO     | sum of deviations: -10045662926.107527
[2025-07-26 01:06:16] 2025-07-26 05:05:43,869 | INFO     | mean x: 1753500662.9247313
[2025-07-26 01:06:16] 2025-07-26 05:05:43,870 | INFO     | mean y: 2357437.3494623657
[2025-07-26 01:06:16] 2025-07-26 05:05:43,870 | INFO     | -- intersect: 8831627392.121227
[2025-07-26 01:06:16] 2025-07-26 05:05:43,870 | INFO     | intersect: 8831627392.121227
[2025-07-26 01:06:16] 2025-07-26 05:05:43,870 | INFO     | chi2: 0.9080219791131972
[2025-07-26 01:06:16] 2025-07-26 05:05:43,870 | INFO     | current chi2=0.9080219791131972 (change=67.67817928449536 %)
[2025-07-26 01:06:16] 2025-07-26 05:05:43,871 | INFO     | sum of square deviations: 1838438296.3867433
[2025-07-26 01:06:16] 2025-07-26 05:05:43,872 | INFO     | sum of deviations: -11868013125.292824
[2025-07-26 01:06:16] 2025-07-26 05:05:43,872 | INFO     | mean x: 1753500815.4309392
[2025-07-26 01:06:16] 2025-07-26 05:05:43,872 | INFO     | mean y: 2359088.016574586
[2025-07-26 01:06:16] 2025-07-26 05:05:43,872 | INFO     | -- intersect: 11322059473.744526
[2025-07-26 01:06:16] 2025-07-26 05:05:43,872 | INFO     | intersect: 11322059473.744526
[2025-07-26 01:06:16] 2025-07-26 05:05:43,873 | INFO     | chi2: 0.8221974096265983
[2025-07-26 01:06:16] 2025-07-26 05:05:43,873 | INFO     | current chi2=0.8221974096265983 (change=9.45181630629887 %)
[2025-07-26 01:06:16] 2025-07-26 05:05:43,873 | INFO     | left removable region: 20
[2025-07-26 01:06:16] 2025-07-26 05:05:43,873 | INFO     | sum of square deviations: 1392728616.3030322
[2025-07-26 01:06:16] 2025-07-26 05:05:43,874 | INFO     | sum of deviations: 4637745304.939394
[2025-07-26 01:06:16] 2025-07-26 05:05:43,874 | INFO     | mean x: 1753500937.4242425
[2025-07-26 01:06:16] 2025-07-26 05:05:43,874 | INFO     | mean y: 2366897.515151515
[2025-07-26 01:06:16] 2025-07-26 05:05:43,875 | INFO     | -- intersect: -5836739619.3977375
[2025-07-26 01:06:16] 2025-07-26 05:05:43,875 | INFO     | intersect: -5836739619.3977375
[2025-07-26 01:06:16] 2025-07-26 05:05:43,875 | INFO     | chi2: 0.04508773694688679
[2025-07-26 01:06:16] 2025-07-26 05:05:43,875 | INFO     | -- intersect: -5836739619.3977375
[2025-07-26 01:06:16] 2025-07-26 05:05:43,876 | INFO     | current memory leak: 3.33 B/s (using 165 data points, chi2=0.05)
[2025-07-26 01:06:16] 2025-07-26 05:05:43,876 | INFO     | could have reported an average CPU frequency of 2839 MHz (10 samples)
[2025-07-26 01:06:16] 2025-07-26 05:05:43,876 | INFO     | ..............................
[2025-07-26 01:06:16] 2025-07-26 05:05:43,876 | INFO     | . Timing measurements:
[2025-07-26 01:06:16] 2025-07-26 05:05:43,876 | INFO     | . get job = 0 s
[2025-07-26 01:06:16] 2025-07-26 05:05:43,876 | INFO     | . initial setup = 4 s
[2025-07-26 01:06:16] 2025-07-26 05:05:43,877 | INFO     | . payload setup = 28 s
[2025-07-26 01:06:16] 2025-07-26 05:05:43,877 | INFO     | . stage-in = 0 s
[2025-07-26 01:06:16] 2025-07-26 05:05:43,877 | INFO     | . payload execution = 11622 s
[2025-07-26 01:06:16] 2025-07-26 05:05:43,877 | INFO     | . stage-out = 3 s
[2025-07-26 01:06:16] 2025-07-26 05:05:43,877 | INFO     | . log creation = 0 s
[2025-07-26 01:06:16] 2025-07-26 05:05:43,877 | INFO     | ..............................
[2025-07-26 01:06:16] 2025-07-26 05:05:43,976 | INFO     | 
[2025-07-26 01:06:16] 2025-07-26 05:05:43,976 | INFO     | job summary report
[2025-07-26 01:06:16] 2025-07-26 05:05:43,977 | INFO     | --------------------------------------------------
[2025-07-26 01:06:16] 2025-07-26 05:05:43,977 | INFO     | PanDA job id: 6745059282
[2025-07-26 01:06:16] 2025-07-26 05:05:43,977 | INFO     | task id: 45743349
[2025-07-26 01:06:16] 2025-07-26 05:05:43,977 | INFO     | errors: (none)
[2025-07-26 01:06:16] 2025-07-26 05:05:43,977 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-26 01:06:16] 2025-07-26 05:05:43,977 | INFO     | pilot state: finished 
[2025-07-26 01:06:16] 2025-07-26 05:05:43,977 | INFO     | transexitcode: 0
[2025-07-26 01:06:16] 2025-07-26 05:05:43,977 | INFO     | exeerrorcode: 0
[2025-07-26 01:06:16] 2025-07-26 05:05:43,977 | INFO     | exeerrordiag: 
[2025-07-26 01:06:16] 2025-07-26 05:05:43,977 | INFO     | exitcode: 0
[2025-07-26 01:06:16] 2025-07-26 05:05:43,978 | INFO     | exitmsg: OK
[2025-07-26 01:06:16] 2025-07-26 05:05:43,978 | INFO     | cpuconsumptiontime: 48896 s
[2025-07-26 01:06:16] 2025-07-26 05:05:43,978 | INFO     | nevents: 400
[2025-07-26 01:06:16] 2025-07-26 05:05:43,978 | INFO     | neventsw: 0
[2025-07-26 01:06:16] 2025-07-26 05:05:43,978 | INFO     | pid: 2443013
[2025-07-26 01:06:16] 2025-07-26 05:05:43,978 | INFO     | pgrp: 2443013
[2025-07-26 01:06:16] 2025-07-26 05:05:43,978 | INFO     | corecount: 12
[2025-07-26 01:06:16] 2025-07-26 05:05:43,978 | INFO     | event service: False
[2025-07-26 01:06:16] 2025-07-26 05:05:43,978 | INFO     | sizes: {0: 2396645, 1: 2397330, 2: 2397529, 13: 2397529, 24: 2397585, 32: 2397875, 35: 2398031, 11655: 2427348, 11659: 2436346, 11662: 2436402, 11683: 2436596}
[2025-07-26 01:06:16] 2025-07-26 05:05:43,978 | INFO     | --------------------------------------------------
[2025-07-26 01:06:16] 2025-07-26 05:05:43,979 | INFO     | 
[2025-07-26 01:06:16] 2025-07-26 05:05:43,979 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-07-26 01:06:16] 2025-07-26 05:05:44,005 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-26 01:06:16] 2025-07-26 05:05:44,006 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-26 01:06:16] 2025-07-26 05:05:44,006 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-26 01:06:16] 2025-07-26 05:05:44,006 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-26 01:06:16] 2025-07-26 05:05:44,006 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-26 01:06:16] 2025-07-26 05:05:44,006 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-26 01:06:16] 2025-07-26 05:05:44,006 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-26 01:06:16] 2025-07-26 05:05:44,006 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-26 01:06:16] 2025-07-26 05:05:44,006 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-26 01:06:16] 2025-07-26 05:05:44,006 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-26 01:06:16] 2025-07-26 05:05:44,007 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-26 01:06:16] 2025-07-26 05:05:44,007 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-26 01:06:16] 2025-07-26 05:05:44,007 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-26 01:06:16] 2025-07-26 05:05:44,007 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-26 01:06:16] 2025-07-26 05:05:44,007 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-26 01:06:16] 2025-07-26 05:05:44,007 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-26 01:06:16] 2025-07-26 05:05:44,007 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-26 01:06:16] 2025-07-26 05:05:44,007 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-26 01:06:16] 2025-07-26 05:05:44,007 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-26 01:06:16] 2025-07-26 05:05:44,007 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-26 01:06:16] 2025-07-26 05:05:44,008 | INFO     | job 6745059282 has completed (purged errors)
[2025-07-26 01:06:16] 2025-07-26 05:05:44,008 | INFO     | overall cleanup function is called
[2025-07-26 01:06:16] 2025-07-26 05:05:45,022 | INFO     | --- collectZombieJob: --- 10, [2443013]
[2025-07-26 01:06:16] 2025-07-26 05:05:45,023 | INFO     | zombie collector waiting for pid 2443013
[2025-07-26 01:06:16] 2025-07-26 05:05:45,023 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-26 01:06:16] 2025-07-26 05:05:45,023 | INFO     | collected zombie processes
[2025-07-26 01:06:16] 2025-07-26 05:05:45,023 | INFO     | will attempt to kill all subprocesses of pid=2443013
[2025-07-26 01:06:16] 2025-07-26 05:05:45,576 | INFO     | process IDs to be killed: [2443013] (in reverse order)
[2025-07-26 01:06:16] 2025-07-26 05:05:45,732 | WARNING  | found no corresponding commands to process id(s)
[2025-07-26 01:06:16] 2025-07-26 05:05:45,733 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-26 01:06:16] 2025-07-26 05:05:45,771 | INFO     | did not find any defunct processes belonging to 2443013
[2025-07-26 01:06:16] 2025-07-26 05:05:45,799 | INFO     | did not find any defunct processes belonging to 2443013
[2025-07-26 01:06:16] 2025-07-26 05:05:45,800 | INFO     | ready for new job
[2025-07-26 01:06:16] 2025-07-26 05:05:45,800 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-26 01:06:16] 2025-07-26 05:05:45,807 | INFO     | ***************************************
[2025-07-26 01:06:16] 2025-07-26 05:05:45,807 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-26 01:06:16] 2025-07-26 05:05:45,807 | INFO     | ***************************************
[2025-07-26 01:06:16] 2025-07-26 05:05:45,807 | INFO     | 
[2025-07-26 01:06:16] 2025-07-26 05:05:45,830 | INFO     | architecture information:
[2025-07-26 01:06:16] 2025-07-26 05:05:45,831 | INFO     | executing command: cat /etc/os-release
[2025-07-26 01:06:16] 2025-07-26 05:05:45,882 | INFO     | cat /etc/os-release:
[2025-07-26 01:06:16] NAME="CentOS Linux"
[2025-07-26 01:06:16] VERSION="7 (Core)"
[2025-07-26 01:06:16] ID="centos"
[2025-07-26 01:06:16] ID_LIKE="rhel fedora"
[2025-07-26 01:06:16] VERSION_ID="7"
[2025-07-26 01:06:16] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-26 01:06:16] ANSI_COLOR="0;31"
[2025-07-26 01:06:16] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-26 01:06:16] HOME_URL="https://www.centos.org/"
[2025-07-26 01:06:16] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-26 01:06:16] 
[2025-07-26 01:06:16] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-26 01:06:16] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-26 01:06:16] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-26 01:06:16] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-26 01:06:16] 
[2025-07-26 01:06:16] 2025-07-26 05:05:45,882 | INFO     | ***************************************
[2025-07-26 01:06:16] 2025-07-26 05:05:46,386 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-07-26 01:06:16] 2025-07-26 05:05:46,433 | INFO     | sufficient remaining disk space (56217305088 B)
[2025-07-26 01:06:16] 2025-07-26 05:05:46,434 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-26 01:06:16] 2025-07-26 05:05:46,434 | INFO     | current server update state: UPDATING_FINAL
[2025-07-26 01:06:16] 2025-07-26 05:05:46,434 | INFO     | update_server=False
[2025-07-26 01:06:16] 2025-07-26 05:05:46,434 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-26 01:06:16] 2025-07-26 05:05:46,436 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-26 01:06:16] 2025-07-26 05:05:46,436 | INFO     | aborting loop
[2025-07-26 01:06:16] 2025-07-26 05:05:46,440 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-26 01:06:16] 2025-07-26 05:05:46,711 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-26 01:06:16] 2025-07-26 05:05:47,111 | INFO     | all job control threads have been joined
[2025-07-26 01:06:16] 2025-07-26 05:05:47,223 | INFO     | all data control threads have been joined
[2025-07-26 01:06:16] 2025-07-26 05:05:47,442 | INFO     | [job] job monitor thread has finished
[2025-07-26 01:06:16] 2025-07-26 05:05:47,444 | INFO     | all payload control threads have been joined
[2025-07-26 01:06:16] 2025-07-26 05:05:47,445 | INFO     | [job] retrieve thread has finished
[2025-07-26 01:06:16] 2025-07-26 05:05:47,752 | INFO     | [job] create_data_payload thread has finished
[2025-07-26 01:06:16] 2025-07-26 05:05:47,752 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-26 01:06:16] 2025-07-26 05:05:47,913 | INFO     | [payload] validate_post thread has finished
[2025-07-26 01:06:16] 2025-07-26 05:05:48,117 | INFO     | [job] control thread has finished
[2025-07-26 01:06:16] 2025-07-26 05:05:48,229 | INFO     | [data] control thread has finished
[2025-07-26 01:06:16] 2025-07-26 05:05:48,447 | INFO     | [data] copytool_out thread has finished
[2025-07-26 01:06:16] 2025-07-26 05:05:48,450 | INFO     | [payload] control thread has finished
[2025-07-26 01:06:16] 2025-07-26 05:05:48,605 | INFO     | [job] validate thread has finished
[2025-07-26 01:06:16] 2025-07-26 05:05:48,646 | INFO     | [payload] failed_post thread has finished
[2025-07-26 01:06:16] 2025-07-26 05:05:48,648 | INFO     | [payload] validate_pre thread has finished
[2025-07-26 01:06:16] 2025-07-26 05:05:48,684 | INFO     | [payload] execute_payloads thread has finished
[2025-07-26 01:06:16] 2025-07-26 05:05:48,684 | INFO     | [data] copytool_in thread has finished
[2025-07-26 01:06:16] 2025-07-26 05:05:48,996 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-26 01:06:16] 2025-07-26 05:05:50,002 | INFO     | [job] queue monitor thread has finished
[2025-07-26 01:06:16] 2025-07-26 05:05:50,720 | INFO     | [data] queue_monitor thread has finished
[2025-07-26 01:06:16] 2025-07-26 05:05:51,451 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140219147384640)>', '<ExcThread(monitor, started 140218057352960)>']
[2025-07-26 01:06:16] 2025-07-26 05:05:56,477 | INFO     | all workflow threads have been joined
[2025-07-26 01:06:16] 2025-07-26 05:05:56,481 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-26 01:06:16] 2025-07-26 05:05:56,481 | INFO     | traces error code: 0
[2025-07-26 01:06:16] 2025-07-26 05:05:56,481 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-26 01:06:16] 2025-07-26 05:06:16,009 | INFO     | PID=2435065 has CPU usage=3.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-26 01:06:16] 2025-07-26 05:06:16,010 | INFO     | .. there are 33 such processes running
[2025-07-26 01:06:16] 2025-07-26 05:06:16,010 | INFO     | found 0 job(s) in 20 queues
[2025-07-26 01:06:16] 2025-07-26 05:06:16,010 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-26 01:06:16] 2025-07-26 05:06:16,010 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-26 01:06:16] 2025-07-26 05:06:16,011 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-26 01:06:16] 2025-07-26 05:06:16,011 | CRITICAL | thread 'MainThread' is not alive
[2025-07-26 01:06:16] 2025-07-26 05:06:16,011 | INFO     | [monitor] control thread has ended
[2025-07-26 01:06:16] 2025-07-26 05:06:16,292 [wrapper] ==== pilot stdout END ====
[2025-07-26 01:06:16] 2025-07-26 05:06:16,313 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-26 01:06:16] 2025-07-26 05:06:16,334 [wrapper] pilotpid: 2435065
[2025-07-26 01:06:16] 2025-07-26 05:06:16,340 [wrapper] Pilot exit status: 0
[2025-07-26 01:06:16] 2025-07-26 05:06:16,388 [wrapper] pandaids: 6745059282
[2025-07-26 01:06:16] 2025-07-26 05:06:16,489 [wrapper] cleanup supervisor_pilot 3257380 2435066
[2025-07-26 01:06:16] 2025-07-26 05:06:16,492 [wrapper] Test setup, not cleaning
[2025-07-26 01:06:16] 2025-07-26 05:06:16,503 [wrapper] apfmon messages muted
[2025-07-26 01:06:16] 2025-07-26 05:06:16,533 [wrapper] ==== wrapper stdout END ====
[2025-07-26 01:06:16] 2025-07-26 05:06:16,572 [wrapper] ==== wrapper stderr END ====
[2025-07-26 01:06:16]  *** Error codes and diagnostics ***
[2025-07-26 01:06:16]     "exeErrorCode": 0,
[2025-07-26 01:06:16]     "exeErrorDiag": "",
[2025-07-26 01:06:16]     "pilotErrorCode": 0,
[2025-07-26 01:06:16]     "pilotErrorDiag": "",
[2025-07-26 01:06:16]  *** Listing of results directory ***
[2025-07-26 01:06:16] total 430984
[2025-07-26 01:06:16] -rw-r--r--. 1 boincer umatlas    530466 Jul 25 13:32 pilot3.tar.gz
[2025-07-26 01:06:16] -rw-r--r--. 1 boincer umatlas      5112 Jul 25 13:44 queuedata.json
[2025-07-26 01:06:16] -rwx------. 1 boincer umatlas     36292 Jul 25 13:46 runpilot2-wrapper.sh
[2025-07-26 01:06:16] -rw-r--r--. 1 boincer umatlas       100 Jul 25 21:48 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-26 01:06:16] -rwxr-xr-x. 1 boincer umatlas      7986 Jul 25 21:48 run_atlas
[2025-07-26 01:06:16] -rw-r--r--. 1 boincer umatlas       105 Jul 25 21:48 job.xml
[2025-07-26 01:06:16] -rw-r--r--. 2 boincer umatlas 228898552 Jul 25 21:48 EVNT.45743347._001400.pool.root.1
[2025-07-26 01:06:16] -rw-r--r--. 2 boincer umatlas     15095 Jul 25 21:48 start_atlas.sh
[2025-07-26 01:06:16] drwxrwx--x. 2 boincer umatlas      4096 Jul 25 21:48 shared
[2025-07-26 01:06:16] -rw-r--r--. 2 boincer umatlas    542891 Jul 25 21:48 input.tar.gz
[2025-07-26 01:06:16] -rw-r--r--. 1 boincer umatlas         0 Jul 25 21:48 boinc_lockfile
[2025-07-26 01:06:16] -rw-r--r--. 1 boincer umatlas      2562 Jul 25 21:49 pandaJob.out
[2025-07-26 01:06:16] -rw-------. 1 boincer umatlas    979985 Jul 25 21:50 agis_schedconf.cvmfs.json
[2025-07-26 01:06:16] drwx------. 4 boincer umatlas      4096 Jul 25 21:50 pilot3
[2025-07-26 01:06:16] -rw-r--r--. 1 boincer umatlas      6843 Jul 26 01:03 init_data.xml
[2025-07-26 01:06:16] -rw-------. 1 boincer umatlas 205834409 Jul 26 01:04 HITS.45743349._024632.pool.root.1
[2025-07-26 01:06:16] -rw-r--r--. 1 boincer umatlas       531 Jul 26 01:04 boinc_task_state.xml
[2025-07-26 01:06:16] -rw-------. 1 boincer umatlas      1041 Jul 26 01:05 memory_monitor_summary.json
[2025-07-26 01:06:16] -rw-------. 1 boincer umatlas   1593052 Jul 26 01:05 agis_ddmendpoints.agis.ALL.json
[2025-07-26 01:06:16] -rw-------. 1 boincer umatlas    421713 Jul 26 01:05 log.45743349._024632.job.log.tgz.1
[2025-07-26 01:06:16] -rw-------. 1 boincer umatlas        95 Jul 26 01:05 pilot_heartbeat.json
[2025-07-26 01:06:16] -rw-------. 1 boincer umatlas      7829 Jul 26 01:05 heartbeat.json
[2025-07-26 01:06:16] -rw-r--r--. 1 boincer umatlas        28 Jul 26 01:06 wrapper_checkpoint.txt
[2025-07-26 01:06:16] -rw-r--r--. 1 boincer umatlas      8192 Jul 26 01:06 boinc_mmap_file
[2025-07-26 01:06:16] -rw-------. 1 boincer umatlas       893 Jul 26 01:06 pilotlog.txt
[2025-07-26 01:06:16] -rw-------. 1 boincer umatlas    939277 Jul 26 01:06 log.45743349._024632.job.log.1
[2025-07-26 01:06:16] -rw-------. 1 boincer umatlas       357 Jul 26 01:06 output.list
[2025-07-26 01:06:16] -rw-r--r--. 1 boincer umatlas       620 Jul 26 01:06 runtime_log
[2025-07-26 01:06:16] -rw-------. 1 boincer umatlas   1382400 Jul 26 01:06 result.tar.gz
[2025-07-26 01:06:16] -rw-------. 1 boincer umatlas       657 Jul 26 01:06 VTYMDmxfbz7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmX5PLDm8NnZum.diag
[2025-07-26 01:06:16] -rw-r--r--. 1 boincer umatlas      8668 Jul 26 01:06 runtime_log.err
[2025-07-26 01:06:16] -rw-r--r--. 1 boincer umatlas     21277 Jul 26 01:06 stderr.txt
[2025-07-26 01:06:16] HITS file was successfully produced:
[2025-07-26 01:06:16] -rw-------. 1 boincer umatlas 205834409 Jul 26 01:04 shared/HITS.pool.root.1
[2025-07-26 01:06:16]  *** Contents of shared directory: ***
[2025-07-26 01:06:16] total 426448
[2025-07-26 01:06:16] -rw-r--r--. 2 boincer umatlas 228898552 Jul 25 21:48 ATLAS.root_0
[2025-07-26 01:06:16] -rw-r--r--. 2 boincer umatlas     15095 Jul 25 21:48 start_atlas.sh
[2025-07-26 01:06:16] -rw-r--r--. 2 boincer umatlas    542891 Jul 25 21:48 input.tar.gz
[2025-07-26 01:06:16] -rw-------. 1 boincer umatlas 205834409 Jul 26 01:04 HITS.pool.root.1
[2025-07-26 01:06:16] -rw-------. 1 boincer umatlas   1382400 Jul 26 01:06 result.tar.gz
01:06:18 (2429725): run_atlas exited; CPU time 49262.186949
01:06:18 (2429725): called boinc_finish(0)

</stderr_txt>
]]>

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