Stderr output

<core_client_version>8.2.4</core_client_version>
<![CDATA[
<stderr_txt>
12:35:05 (849407): wrapper (7.7.26015): starting
12:35:05 (849407): wrapper: running run_atlas (--nthreads 12)
[2025-07-29 12:35:05] Arguments: --nthreads 12
[2025-07-29 12:35:05] Threads: 12
[2025-07-29 12:35:05] Checking for CVMFS
[2025-07-29 12:35:06] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-29 12:35:07] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-29 12:35:07] Running cvmfs_config stat atlas.cern.ch
[2025-07-29 12:35:09] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-29 12:35:09] 2.13.0.0 1164766 10548 93864 148887 2 188 3911526 4096001 16474 130560 0 116080522 99.999 389124 206 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.85.111:3128 1
[2025-07-29 12:35:09] CVMFS is ok
[2025-07-29 12:35:09] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-29 12:35:09] Checking for apptainer binary...
[2025-07-29 12:35:09] apptainer is not installed, using version from CVMFS
[2025-07-29 12:35:09] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-29 12:35:46] epyc7v12
[2025-07-29 12:35:46] apptainer works
[2025-07-29 12:35:46] Set ATHENA_PROC_NUMBER=12
[2025-07-29 12:35:46] Set ATHENA_CORE_NUMBER=12
[2025-07-29 12:35:47] Starting ATLAS job with PandaID=6745059302
[2025-07-29 12:35:47] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/opt/boinc/instance_homes/boinc_31422/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-29 15:20:00]  *** The last 200 lines of the pilot log: ***
[2025-07-29 15:20:00] 2025-07-29 15:19:19,904 | INFO     | mean y: 2355900.6142857145
[2025-07-29 15:20:00] 2025-07-29 15:19:19,904 | INFO     | -- intersect: -298970500711.2605
[2025-07-29 15:20:00] 2025-07-29 15:19:19,904 | INFO     | intersect: -298970500711.2605
[2025-07-29 15:20:00] 2025-07-29 15:19:19,904 | INFO     | chi2: 14.661895787072604
[2025-07-29 15:20:00] 2025-07-29 15:19:19,904 | INFO     | sum of square deviations: 762904317.2592596
[2025-07-29 15:20:00] 2025-07-29 15:19:19,905 | INFO     | sum of deviations: 148937302935.96292
[2025-07-29 15:20:00] 2025-07-29 15:19:19,905 | INFO     | mean x: 1753797748.074074
[2025-07-29 15:20:00] 2025-07-29 15:19:19,906 | INFO     | mean y: 2362128.303703704
[2025-07-29 15:20:00] 2025-07-29 15:19:19,906 | INFO     | -- intersect: -342381211517.86786
[2025-07-29 15:20:00] 2025-07-29 15:19:19,906 | INFO     | intersect: -342381211517.86786
[2025-07-29 15:20:00] 2025-07-29 15:19:19,906 | INFO     | chi2: 13.872846350312026
[2025-07-29 15:20:00] 2025-07-29 15:19:19,906 | INFO     | current chi2=13.872846350312026 (change=5.381633099972538 %)
[2025-07-29 15:20:00] 2025-07-29 15:19:19,906 | INFO     | right removable region: 134
[2025-07-29 15:20:00] 2025-07-29 15:19:19,906 | INFO     | sum of square deviations: 762898217.2592596
[2025-07-29 15:20:00] 2025-07-29 15:19:19,911 | INFO     | sum of deviations: 95315639489.25922
[2025-07-29 15:20:00] 2025-07-29 15:19:19,911 | INFO     | mean x: 1753798053.074074
[2025-07-29 15:20:00] 2025-07-29 15:19:19,912 | INFO     | mean y: 2442148.474074074
[2025-07-29 15:20:00] 2025-07-29 15:19:19,912 | INFO     | -- intersect: -219115100902.44226
[2025-07-29 15:20:00] 2025-07-29 15:19:19,912 | INFO     | intersect: -219115100902.44226
[2025-07-29 15:20:00] 2025-07-29 15:19:19,912 | INFO     | chi2: 8.355841310133101
[2025-07-29 15:20:00] 2025-07-29 15:19:19,912 | INFO     | current chi2=8.355841310133101 (change=43.00981652386011 %)
[2025-07-29 15:20:00] 2025-07-29 15:19:19,912 | INFO     | sum of square deviations: 681228519.7307714
[2025-07-29 15:20:00] 2025-07-29 15:19:19,913 | INFO     | sum of deviations: 50827477319.38459
[2025-07-29 15:20:00] 2025-07-29 15:19:19,913 | INFO     | mean x: 1753798205.5769231
[2025-07-29 15:20:00] 2025-07-29 15:19:19,913 | INFO     | mean y: 2525193.4615384615
[2025-07-29 15:20:00] 2025-07-29 15:19:19,913 | INFO     | -- intersect: -130850978344.48187
[2025-07-29 15:20:00] 2025-07-29 15:19:19,914 | INFO     | intersect: -130850978344.48187
[2025-07-29 15:20:00] 2025-07-29 15:19:19,914 | INFO     | chi2: 3.894113213447514
[2025-07-29 15:20:00] 2025-07-29 15:19:19,914 | INFO     | current chi2=3.894113213447514 (change=53.39651545649705 %)
[2025-07-29 15:20:00] 2025-07-29 15:19:19,914 | INFO     | sum of square deviations: 605605447.2
[2025-07-29 15:20:00] 2025-07-29 15:19:19,919 | INFO     | sum of deviations: 15916993179.519987
[2025-07-29 15:20:00] 2025-07-29 15:19:19,919 | INFO     | mean x: 1753798358.08
[2025-07-29 15:20:00] 2025-07-29 15:19:19,919 | INFO     | mean y: 2595420.848
[2025-07-29 15:20:00] 2025-07-29 15:19:19,919 | INFO     | -- intersect: -46092096482.730225
[2025-07-29 15:20:00] 2025-07-29 15:19:19,919 | INFO     | intersect: -46092096482.730225
[2025-07-29 15:20:00] 2025-07-29 15:19:19,920 | INFO     | chi2: 1.3963718294902843
[2025-07-29 15:20:00] 2025-07-29 15:19:19,920 | INFO     | current chi2=1.3963718294902843 (change=64.14146808397344 %)
[2025-07-29 15:20:00] 2025-07-29 15:19:19,920 | INFO     | sum of square deviations: 535796437.16666526
[2025-07-29 15:20:00] 2025-07-29 15:19:19,921 | INFO     | sum of deviations: 2996664848.2500114
[2025-07-29 15:20:00] 2025-07-29 15:19:19,921 | INFO     | mean x: 1753798510.5833333
[2025-07-29 15:20:00] 2025-07-29 15:19:19,921 | INFO     | mean y: 2623527.625
[2025-07-29 15:20:00] 2025-07-29 15:19:19,921 | INFO     | -- intersect: -9806225473.630129
[2025-07-29 15:20:00] 2025-07-29 15:19:19,921 | INFO     | intersect: -9806225473.630129
[2025-07-29 15:20:00] 2025-07-29 15:19:19,921 | INFO     | chi2: 1.0876483877797474
[2025-07-29 15:20:00] 2025-07-29 15:19:19,922 | INFO     | current chi2=1.0876483877797474 (change=22.108970919531497 %)
[2025-07-29 15:20:00] 2025-07-29 15:19:19,922 | INFO     | left removable region: 40
[2025-07-29 15:20:00] 2025-07-29 15:19:19,922 | INFO     | sum of square deviations: 257522214.43617037
[2025-07-29 15:20:00] 2025-07-29 15:19:19,922 | INFO     | sum of deviations: -42106654.265957534
[2025-07-29 15:20:00] 2025-07-29 15:19:19,927 | INFO     | mean x: 1753798937.606383
[2025-07-29 15:20:00] 2025-07-29 15:19:19,927 | INFO     | mean y: 2671566.776595745
[2025-07-29 15:20:00] 2025-07-29 15:19:19,927 | INFO     | -- intersect: 289429762.2956828
[2025-07-29 15:20:00] 2025-07-29 15:19:19,927 | INFO     | intersect: 289429762.2956828
[2025-07-29 15:20:00] 2025-07-29 15:19:19,927 | INFO     | chi2: 0.0010530328386408809
[2025-07-29 15:20:00] 2025-07-29 15:19:19,927 | INFO     | -- intersect: 289429762.2956828
[2025-07-29 15:20:00] 2025-07-29 15:19:19,927 | INFO     | current memory leak: -0.16 B/s (using 94 data points, chi2=0.00)
[2025-07-29 15:20:00] 2025-07-29 15:19:19,928 | INFO     | could have reported an average CPU frequency of 2409 MHz (8 samples)
[2025-07-29 15:20:00] 2025-07-29 15:19:19,928 | INFO     | ..............................
[2025-07-29 15:20:00] 2025-07-29 15:19:19,928 | INFO     | . Timing measurements:
[2025-07-29 15:20:00] 2025-07-29 15:19:19,928 | INFO     | . get job = 0 s
[2025-07-29 15:20:00] 2025-07-29 15:19:19,929 | INFO     | . initial setup = 12 s
[2025-07-29 15:20:00] 2025-07-29 15:19:19,929 | INFO     | . payload setup = 273 s
[2025-07-29 15:20:00] 2025-07-29 15:19:19,929 | INFO     | . stage-in = 0 s
[2025-07-29 15:20:00] 2025-07-29 15:19:19,929 | INFO     | . payload execution = 8757 s
[2025-07-29 15:20:00] 2025-07-29 15:19:19,929 | INFO     | . stage-out = 4 s
[2025-07-29 15:20:00] 2025-07-29 15:19:19,929 | INFO     | . log creation = 1 s
[2025-07-29 15:20:00] 2025-07-29 15:19:19,929 | INFO     | ..............................
[2025-07-29 15:20:00] 2025-07-29 15:19:20,092 | INFO     | 
[2025-07-29 15:20:00] 2025-07-29 15:19:20,092 | INFO     | job summary report
[2025-07-29 15:20:00] 2025-07-29 15:19:20,092 | INFO     | --------------------------------------------------
[2025-07-29 15:20:00] 2025-07-29 15:19:20,092 | INFO     | PanDA job id: 6745059302
[2025-07-29 15:20:00] 2025-07-29 15:19:20,092 | INFO     | task id: 45743349
[2025-07-29 15:20:00] 2025-07-29 15:19:20,092 | INFO     | errors: (none)
[2025-07-29 15:20:00] 2025-07-29 15:19:20,093 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-29 15:20:00] 2025-07-29 15:19:20,093 | INFO     | pilot state: finished 
[2025-07-29 15:20:00] 2025-07-29 15:19:20,093 | INFO     | transexitcode: 0
[2025-07-29 15:20:00] 2025-07-29 15:19:20,093 | INFO     | exeerrorcode: 0
[2025-07-29 15:20:00] 2025-07-29 15:19:20,093 | INFO     | exeerrordiag: 
[2025-07-29 15:20:00] 2025-07-29 15:19:20,093 | INFO     | exitcode: 0
[2025-07-29 15:20:00] 2025-07-29 15:19:20,093 | INFO     | exitmsg: OK
[2025-07-29 15:20:00] 2025-07-29 15:19:20,093 | INFO     | cpuconsumptiontime: 51517 s
[2025-07-29 15:20:00] 2025-07-29 15:19:20,093 | INFO     | nevents: 400
[2025-07-29 15:20:00] 2025-07-29 15:19:20,093 | INFO     | neventsw: 0
[2025-07-29 15:20:00] 2025-07-29 15:19:20,093 | INFO     | pid: 883032
[2025-07-29 15:20:00] 2025-07-29 15:19:20,094 | INFO     | pgrp: 883032
[2025-07-29 15:20:00] 2025-07-29 15:19:20,094 | INFO     | corecount: 12
[2025-07-29 15:20:00] 2025-07-29 15:19:20,094 | INFO     | event service: False
[2025-07-29 15:20:00] 2025-07-29 15:19:20,094 | INFO     | sizes: {0: 2391757, 1: 2391956, 2: 2391956, 12: 2391984, 23: 2392012, 34: 2392040, 45: 2392196, 56: 2392224, 66: 2392252, 77: 2392280, 88: 2392336, 99: 2392644, 11
[2025-07-29 15:20:00] 2025-07-29 15:19:20,094 | INFO     | --------------------------------------------------
[2025-07-29 15:20:00] 2025-07-29 15:19:20,094 | INFO     | 
[2025-07-29 15:20:00] 2025-07-29 15:19:20,094 | INFO     | executing command: ls -lF /opt/boinc/instance_homes/boinc_31422/slots/1
[2025-07-29 15:20:00] 2025-07-29 15:19:21,087 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-29 15:20:00] 2025-07-29 15:19:21,088 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-29 15:20:00] 2025-07-29 15:19:21,088 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-29 15:20:00] 2025-07-29 15:19:21,088 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-29 15:20:00] 2025-07-29 15:19:21,088 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-29 15:20:00] 2025-07-29 15:19:21,088 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-29 15:20:00] 2025-07-29 15:19:21,088 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-29 15:20:00] 2025-07-29 15:19:21,088 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-29 15:20:00] 2025-07-29 15:19:21,088 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-29 15:20:00] 2025-07-29 15:19:21,088 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-29 15:20:00] 2025-07-29 15:19:21,088 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-29 15:20:00] 2025-07-29 15:19:21,089 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-29 15:20:00] 2025-07-29 15:19:21,089 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-29 15:20:00] 2025-07-29 15:19:21,089 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-29 15:20:00] 2025-07-29 15:19:21,089 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-29 15:20:00] 2025-07-29 15:19:21,089 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-29 15:20:00] 2025-07-29 15:19:21,089 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-29 15:20:00] 2025-07-29 15:19:21,089 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-29 15:20:00] 2025-07-29 15:19:21,089 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-29 15:20:00] 2025-07-29 15:19:21,089 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-29 15:20:00] 2025-07-29 15:19:21,089 | INFO     | job 6745059302 has completed (purged errors)
[2025-07-29 15:20:00] 2025-07-29 15:19:21,090 | INFO     | overall cleanup function is called
[2025-07-29 15:20:00] 2025-07-29 15:19:22,111 | INFO     | --- collectZombieJob: --- 10, [883032]
[2025-07-29 15:20:00] 2025-07-29 15:19:22,111 | INFO     | zombie collector waiting for pid 883032
[2025-07-29 15:20:00] 2025-07-29 15:19:22,111 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-29 15:20:00] 2025-07-29 15:19:22,111 | INFO     | collected zombie processes
[2025-07-29 15:20:00] 2025-07-29 15:19:22,112 | INFO     | will attempt to kill all subprocesses of pid=883032
[2025-07-29 15:20:00] 2025-07-29 15:19:23,543 | INFO     | process IDs to be killed: [883032] (in reverse order)
[2025-07-29 15:20:00] 2025-07-29 15:19:33,448 | WARNING  | found no corresponding commands to process id(s)
[2025-07-29 15:20:00] 2025-07-29 15:19:33,448 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-29 15:20:00] 2025-07-29 15:19:33,487 | INFO     | did not find any defunct processes belonging to 883032
[2025-07-29 15:20:00] 2025-07-29 15:19:33,521 | INFO     | did not find any defunct processes belonging to 883032
[2025-07-29 15:20:00] 2025-07-29 15:19:33,522 | INFO     | ready for new job
[2025-07-29 15:20:00] 2025-07-29 15:19:33,522 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-29 15:20:00] 2025-07-29 15:19:33,528 | INFO     | ***************************************
[2025-07-29 15:20:00] 2025-07-29 15:19:33,528 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-29 15:20:00] 2025-07-29 15:19:33,528 | INFO     | ***************************************
[2025-07-29 15:20:00] 2025-07-29 15:19:33,528 | INFO     | 
[2025-07-29 15:20:00] 2025-07-29 15:19:33,542 | INFO     | architecture information:
[2025-07-29 15:20:00] 2025-07-29 15:19:33,571 | INFO     | executing command: cat /etc/os-release
[2025-07-29 15:20:00] 2025-07-29 15:19:34,108 | INFO     | cat /etc/os-release:
[2025-07-29 15:20:00] NAME="CentOS Linux"
[2025-07-29 15:20:00] VERSION="7 (Core)"
[2025-07-29 15:20:00] ID="centos"
[2025-07-29 15:20:00] ID_LIKE="rhel fedora"
[2025-07-29 15:20:00] VERSION_ID="7"
[2025-07-29 15:20:00] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-29 15:20:00] ANSI_COLOR="0;31"
[2025-07-29 15:20:00] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-29 15:20:00] HOME_URL="https://www.centos.org/"
[2025-07-29 15:20:00] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-29 15:20:00] 
[2025-07-29 15:20:00] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-29 15:20:00] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-29 15:20:00] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-29 15:20:00] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-29 15:20:00] 
[2025-07-29 15:20:00] 2025-07-29 15:19:34,109 | INFO     | ***************************************
[2025-07-29 15:20:00] 2025-07-29 15:19:34,615 | INFO     | executing command: df -mP /opt/boinc/instance_homes/boinc_31422/slots/1
[2025-07-29 15:20:00] 2025-07-29 15:19:35,036 | INFO     | sufficient remaining disk space (283257077760 B)
[2025-07-29 15:20:00] 2025-07-29 15:19:35,036 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-29 15:20:00] 2025-07-29 15:19:35,036 | INFO     | current server update state: UPDATING_FINAL
[2025-07-29 15:20:00] 2025-07-29 15:19:35,036 | INFO     | update_server=False
[2025-07-29 15:20:00] 2025-07-29 15:19:35,036 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-29 15:20:00] 2025-07-29 15:19:35,037 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-29 15:20:00] 2025-07-29 15:19:35,039 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-29 15:20:00] 2025-07-29 15:19:35,039 | INFO     | aborting loop
[2025-07-29 15:20:00] 2025-07-29 15:19:35,174 | INFO     | all data control threads have been joined
[2025-07-29 15:20:00] 2025-07-29 15:19:35,327 | INFO     | all job control threads have been joined
[2025-07-29 15:20:00] 2025-07-29 15:19:36,039 | INFO     | [job] retrieve thread has finished
[2025-07-29 15:20:00] 2025-07-29 15:19:36,047 | INFO     | [job] job monitor thread has finished
[2025-07-29 15:20:00] 2025-07-29 15:19:36,179 | INFO     | [data] control thread has finished
[2025-07-29 15:20:00] 2025-07-29 15:19:36,331 | INFO     | [job] control thread has finished
[2025-07-29 15:20:00] 2025-07-29 15:19:36,355 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-29 15:20:00] 2025-07-29 15:19:36,359 | INFO     | [job] create_data_payload thread has finished
[2025-07-29 15:20:00] 2025-07-29 15:19:36,381 | INFO     | all payload control threads have been joined
[2025-07-29 15:20:00] 2025-07-29 15:19:36,419 | INFO     | [payload] execute_payloads thread has finished
[2025-07-29 15:20:00] 2025-07-29 15:19:36,551 | INFO     | [payload] validate_pre thread has finished
[2025-07-29 15:20:00] 2025-07-29 15:19:36,907 | INFO     | [payload] validate_post thread has finished
[2025-07-29 15:20:00] 2025-07-29 15:19:36,911 | INFO     | [payload] failed_post thread has finished
[2025-07-29 15:20:00] 2025-07-29 15:19:37,047 | INFO     | [data] copytool_out thread has finished
[2025-07-29 15:20:00] 2025-07-29 15:19:37,167 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-29 15:20:00] 2025-07-29 15:19:37,267 | INFO     | [data] copytool_in thread has finished
[2025-07-29 15:20:00] 2025-07-29 15:19:37,295 | INFO     | [job] validate thread has finished
[2025-07-29 15:20:00] 2025-07-29 15:19:37,383 | INFO     | [payload] control thread has finished
[2025-07-29 15:20:00] 2025-07-29 15:19:37,741 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-29 15:20:00] 2025-07-29 15:19:38,175 | INFO     | [job] queue monitor thread has finished
[2025-07-29 15:20:00] 2025-07-29 15:19:41,763 | INFO     | [data] queue_monitor thread has finished
[2025-07-29 15:20:00] 2025-07-29 15:19:43,279 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139705927300928)>', '<ExcThread(monitor, started 139705354024704)>']
[2025-07-29 15:20:00] 2025-07-29 15:19:48,303 | INFO     | all workflow threads have been joined
[2025-07-29 15:20:00] 2025-07-29 15:19:48,303 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-29 15:20:00] 2025-07-29 15:19:48,304 | INFO     | traces error code: 0
[2025-07-29 15:20:00] 2025-07-29 15:19:48,304 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-29 15:20:00] 2025-07-29 15:19:54,532 | INFO     | PID=858227 has CPU usage=4.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-07-29 15:20:00] 2025-07-29 15:19:54,532 | INFO     | .. there are 20 such processes running
[2025-07-29 15:20:00] 2025-07-29 15:19:54,533 | INFO     | found 0 job(s) in 20 queues
[2025-07-29 15:20:00] 2025-07-29 15:19:54,533 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-29 15:20:00] 2025-07-29 15:19:54,533 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-29 15:20:00] 2025-07-29 15:19:54,533 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-29 15:20:00] 2025-07-29 15:19:54,533 | INFO     | [monitor] control thread has ended
[2025-07-29 15:20:00] 2025-07-29 15:19:55,387 [wrapper] ==== pilot stdout END ====
[2025-07-29 15:20:00] 2025-07-29 15:19:55,425 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-29 15:20:00] 2025-07-29 15:19:55,520 [wrapper] pilotpid: 858227
[2025-07-29 15:20:00] 2025-07-29 15:19:55,532 [wrapper] Pilot exit status: 0
[2025-07-29 15:20:00] 2025-07-29 15:19:56,139 [wrapper] pandaids: 6745059302
[2025-07-29 15:20:00] 2025-07-29 15:19:57,483 [wrapper] cleanup supervisor_pilot 1431832 858228
[2025-07-29 15:20:00] 2025-07-29 15:19:57,675 [wrapper] Test setup, not cleaning
[2025-07-29 15:20:00] 2025-07-29 15:19:57,775 [wrapper] apfmon messages muted
[2025-07-29 15:20:00] 2025-07-29 15:19:57,860 [wrapper] ==== wrapper stdout END ====
[2025-07-29 15:20:00] 2025-07-29 15:19:57,936 [wrapper] ==== wrapper stderr END ====
[2025-07-29 15:20:00]  *** Error codes and diagnostics ***
[2025-07-29 15:20:00]     "exeErrorCode": 0,
[2025-07-29 15:20:00]     "exeErrorDiag": "",
[2025-07-29 15:20:00]     "pilotErrorCode": 0,
[2025-07-29 15:20:00]     "pilotErrorDiag": "",
[2025-07-29 15:20:00]  *** Listing of results directory ***
[2025-07-29 15:20:00] total 424588
[2025-07-29 15:20:00] -rw-r--r-- 1 boinc boinc    530466 Jul 25 17:32 pilot3.tar.gz
[2025-07-29 15:20:00] -rwx------ 1 boinc boinc     36292 Jul 25 17:47 runpilot2-wrapper.sh
[2025-07-29 15:20:00] -rw-r--r-- 1 boinc boinc      5112 Jul 25 17:47 queuedata.json
[2025-07-29 15:20:00] -rw-rw-r-- 1 boinc boinc       100 Jul 29 12:35 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-29 15:20:00] -rwxr-xr-x 1 boinc boinc      7986 Jul 29 12:35 run_atlas
[2025-07-29 15:20:00] -rw-rw-r-- 1 boinc boinc       105 Jul 29 12:35 job.xml
[2025-07-29 15:20:00] -rw-r--r-- 2 boinc boinc 227699473 Jul 29 12:35 EVNT.45743347._001401.pool.root.1
[2025-07-29 15:20:00] -rw-r--r-- 2 boinc boinc     15095 Jul 29 12:35 start_atlas.sh
[2025-07-29 15:20:00] drwxrwx--x 2 boinc boinc      4096 Jul 29 12:35 shared
[2025-07-29 15:20:00] -rw-r--r-- 2 boinc boinc    542890 Jul 29 12:35 input.tar.gz
[2025-07-29 15:20:00] -rw-rw-r-- 1 boinc boinc      6568 Jul 29 12:35 init_data.xml
[2025-07-29 15:20:00] -rw-rw-r-- 1 boinc boinc         0 Jul 29 12:35 boinc_setup_complete
[2025-07-29 15:20:00] -rw-rw-r-- 1 boinc boinc         0 Jul 29 12:35 boinc_lockfile
[2025-07-29 15:20:00] -rw-rw-r-- 1 boinc boinc      2561 Jul 29 12:35 pandaJob.out
[2025-07-29 15:20:00] -rw------- 1 boinc boinc    977308 Jul 29 12:40 agis_schedconf.cvmfs.json
[2025-07-29 15:20:00] -rw------- 1 boinc boinc   1589827 Jul 29 12:40 agis_ddmendpoints.agis.ALL.json
[2025-07-29 15:20:00] drwx------ 4 boinc boinc      4096 Jul 29 12:40 pilot3
[2025-07-29 15:20:00] -rw------- 1 boinc boinc 200848714 Jul 29 15:15 HITS.45743349._024652.pool.root.1
[2025-07-29 15:20:00] -rw-rw-r-- 1 boinc boinc       530 Jul 29 15:15 boinc_task_state.xml
[2025-07-29 15:20:00] -rw------- 1 boinc boinc      1022 Jul 29 15:16 memory_monitor_summary.json
[2025-07-29 15:20:00] -rw------- 1 boinc boinc    386490 Jul 29 15:16 log.45743349._024652.job.log.tgz.1
[2025-07-29 15:20:00] -rw------- 1 boinc boinc        95 Jul 29 15:18 pilot_heartbeat.json
[2025-07-29 15:20:00] -rw------- 1 boinc boinc      7734 Jul 29 15:19 heartbeat.json
[2025-07-29 15:20:00] -rw-rw-r-- 1 boinc boinc      8192 Jul 29 15:19 boinc_mmap_file
[2025-07-29 15:20:00] -rw-rw-r-- 1 boinc boinc        27 Jul 29 15:19 wrapper_checkpoint.txt
[2025-07-29 15:20:00] -rw------- 1 boinc boinc       822 Jul 29 15:19 pilotlog.txt
[2025-07-29 15:20:00] -rw------- 1 boinc boinc    788424 Jul 29 15:19 log.45743349._024652.job.log.1
[2025-07-29 15:20:00] -rw------- 1 boinc boinc       357 Jul 29 15:19 output.list
[2025-07-29 15:20:00] -rw-rw-r-- 1 boinc boinc       620 Jul 29 15:20 runtime_log
[2025-07-29 15:20:00] -rw------- 1 boinc boinc   1198080 Jul 29 15:20 result.tar.gz
[2025-07-29 15:20:00] -rw-rw-r-- 1 boinc boinc      8964 Jul 29 15:20 runtime_log.err
[2025-07-29 15:20:00] -rw------- 1 boinc boinc       652 Jul 29 15:20 2knKDmngbz7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDml5PLDmy25Xan.diag
[2025-07-29 15:20:00] -rw-rw-r-- 1 boinc boinc     20760 Jul 29 15:20 stderr.txt
[2025-07-29 15:20:00] HITS file was successfully produced:
[2025-07-29 15:20:00] -rw------- 1 boinc boinc 200848714 Jul 29 15:15 shared/HITS.pool.root.1
[2025-07-29 15:20:00]  *** Contents of shared directory: ***
[2025-07-29 15:20:00] total 420236
[2025-07-29 15:20:00] -rw-r--r-- 2 boinc boinc 227699473 Jul 29 12:35 ATLAS.root_0
[2025-07-29 15:20:00] -rw-r--r-- 2 boinc boinc     15095 Jul 29 12:35 start_atlas.sh
[2025-07-29 15:20:00] -rw-r--r-- 2 boinc boinc    542890 Jul 29 12:35 input.tar.gz
[2025-07-29 15:20:00] -rw------- 1 boinc boinc 200848714 Jul 29 15:15 HITS.pool.root.1
[2025-07-29 15:20:00] -rw------- 1 boinc boinc   1198080 Jul 29 15:20 result.tar.gz
15:20:01 (849407): run_atlas exited; CPU time 51986.327414
15:20:01 (849407): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN