Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
19:02:21 (632679): wrapper (7.7.26015): starting
19:02:21 (632679): wrapper: running run_atlas (--nthreads 10)
[2025-07-25 19:02:21] Arguments: --nthreads 10
[2025-07-25 19:02:21] Threads: 10
[2025-07-25 19:02:21] Checking for CVMFS
[2025-07-25 19:02:21] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-25 19:02:22] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-25 19:02:22] Running cvmfs_config stat atlas.cern.ch
[2025-07-25 19:02:23] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-25 19:02:23] 2.12.6.0 2531586 16134 420568 148756 1 162 25344650 32935936 22637 16776704 0 105825466 99.643 102067514 22920 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-07-25 19:02:23] CVMFS is ok
[2025-07-25 19:02:23] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-25 19:02:23] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-25 19:02:23] Further information can be found at the LHC@home message board.
[2025-07-25 19:02:23] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-25 19:02:23] Checking for apptainer binary...
[2025-07-25 19:02:23] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-25 19:02:23] Running /usr/bin/apptainer --version
[2025-07-25 19:02:23] apptainer version 1.4.1-1.el9
[2025-07-25 19:02:23] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-25 19:02:24] c-1-3.aglt2.org
[2025-07-25 19:02:24] apptainer works
[2025-07-25 19:02:24] Set ATHENA_PROC_NUMBER=10
[2025-07-25 19:02:24] Set ATHENA_CORE_NUMBER=10
[2025-07-25 19:02:24] Starting ATLAS job with PandaID=6741713085
[2025-07-25 19:02:24] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-26 00:03:26]  *** The last 200 lines of the pilot log: ***
[2025-07-26 00:03:26] 2025-07-26 04:02:47,220 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-26 00:03:26] 2025-07-26 04:02:47,253 | INFO     | fitting pss+swap vs Time
[2025-07-26 00:03:26] 2025-07-26 04:02:47,254 | INFO     | sum of square deviations: 7719865297.958909
[2025-07-26 00:03:26] 2025-07-26 04:02:47,256 | INFO     | sum of deviations: 14449392580.349363
[2025-07-26 00:03:26] 2025-07-26 04:02:47,257 | INFO     | mean x: 1753493632.1438355
[2025-07-26 00:03:26] 2025-07-26 04:02:47,276 | INFO     | mean y: 2257834.77739726
[2025-07-26 00:03:26] 2025-07-26 04:02:47,276 | INFO     | -- intersect: -3279783612.8483715
[2025-07-26 00:03:26] 2025-07-26 04:02:47,276 | INFO     | intersect: -3279783612.8483715
[2025-07-26 00:03:26] 2025-07-26 04:02:47,278 | INFO     | chi2: 3.735501995952935
[2025-07-26 00:03:26] 2025-07-26 04:02:47,278 | INFO     | sum of square deviations: 7330056569.456448
[2025-07-26 00:03:26] 2025-07-26 04:02:47,299 | INFO     | sum of deviations: 49048861565.986084
[2025-07-26 00:03:26] 2025-07-26 04:02:47,299 | INFO     | mean x: 1753493479.6480837
[2025-07-26 00:03:26] 2025-07-26 04:02:47,299 | INFO     | mean y: 2271242.2473867596
[2025-07-26 00:03:26] 2025-07-26 04:02:47,299 | INFO     | -- intersect: -11731179669.782318
[2025-07-26 00:03:26] 2025-07-26 04:02:47,299 | INFO     | intersect: -11731179669.782318
[2025-07-26 00:03:26] 2025-07-26 04:02:47,300 | INFO     | chi2: 2.375416384035019
[2025-07-26 00:03:26] 2025-07-26 04:02:47,300 | INFO     | current chi2=2.375416384035019 (change=36.40971450132916 %)
[2025-07-26 00:03:26] 2025-07-26 04:02:47,300 | INFO     | sum of square deviations: 6953596928.4433
[2025-07-26 00:03:26] 2025-07-26 04:02:47,324 | INFO     | sum of deviations: 53575850496.280136
[2025-07-26 00:03:26] 2025-07-26 04:02:47,325 | INFO     | mean x: 1753493327.1524823
[2025-07-26 00:03:26] 2025-07-26 04:02:47,325 | INFO     | mean y: 2273077.5283687944
[2025-07-26 00:03:26] 2025-07-26 04:02:47,325 | INFO     | -- intersect: -13507986045.698904
[2025-07-26 00:03:26] 2025-07-26 04:02:47,325 | INFO     | intersect: -13507986045.698904
[2025-07-26 00:03:26] 2025-07-26 04:02:47,325 | INFO     | chi2: 2.357538390716249
[2025-07-26 00:03:26] 2025-07-26 04:02:47,325 | INFO     | current chi2=2.357538390716249 (change=0.7526256633963785 %)
[2025-07-26 00:03:26] 2025-07-26 04:02:47,326 | INFO     | right removable region: 281
[2025-07-26 00:03:26] 2025-07-26 04:02:47,326 | INFO     | sum of square deviations: 7329977390.850173
[2025-07-26 00:03:26] 2025-07-26 04:02:47,350 | INFO     | sum of deviations: -42411960376.689896
[2025-07-26 00:03:26] 2025-07-26 04:02:47,350 | INFO     | mean x: 1753493784.6550522
[2025-07-26 00:03:26] 2025-07-26 04:02:47,350 | INFO     | mean y: 2279977.993031359
[2025-07-26 00:03:26] 2025-07-26 04:02:47,351 | INFO     | -- intersect: 10148165149.261795
[2025-07-26 00:03:26] 2025-07-26 04:02:47,364 | INFO     | intersect: 10148165149.261795
[2025-07-26 00:03:26] 2025-07-26 04:02:47,364 | INFO     | chi2: 1.6993047891426372
[2025-07-26 00:03:26] 2025-07-26 04:02:47,365 | INFO     | current chi2=1.6993047891426372 (change=54.50933258813209 %)
[2025-07-26 00:03:26] 2025-07-26 04:02:47,365 | INFO     | sum of square deviations: 6953456322.496481
[2025-07-26 00:03:26] 2025-07-26 04:02:47,367 | INFO     | sum of deviations: -56469863498.93617
[2025-07-26 00:03:26] 2025-07-26 04:02:47,367 | INFO     | mean x: 1753493937.1631205
[2025-07-26 00:03:26] 2025-07-26 04:02:47,367 | INFO     | mean y: 2285644.063829787
[2025-07-26 00:03:26] 2025-07-26 04:02:47,367 | INFO     | -- intersect: 14242622921.721863
[2025-07-26 00:03:26] 2025-07-26 04:02:47,368 | INFO     | intersect: 14242622921.721863
[2025-07-26 00:03:26] 2025-07-26 04:02:47,377 | INFO     | chi2: 1.5492768913799768
[2025-07-26 00:03:26] 2025-07-26 04:02:47,377 | INFO     | current chi2=1.5492768913799768 (change=8.828780965088377 %)
[2025-07-26 00:03:26] 2025-07-26 04:02:47,377 | INFO     | left removable region: 20
[2025-07-26 00:03:26] 2025-07-26 04:02:47,404 | INFO     | sum of square deviations: 5512801165.662843
[2025-07-26 00:03:26] 2025-07-26 04:02:47,406 | INFO     | sum of deviations: -19191598969.13793
[2025-07-26 00:03:26] 2025-07-26 04:02:47,406 | INFO     | mean x: 1753493906.6704981
[2025-07-26 00:03:26] 2025-07-26 04:02:47,406 | INFO     | mean y: 2305010.1379310344
[2025-07-26 00:03:26] 2025-07-26 04:02:47,406 | INFO     | -- intersect: 6106706536.761995
[2025-07-26 00:03:26] 2025-07-26 04:02:47,406 | INFO     | intersect: 6106706536.761995
[2025-07-26 00:03:26] 2025-07-26 04:02:47,407 | INFO     | chi2: 0.09547704758640553
[2025-07-26 00:03:26] 2025-07-26 04:02:47,407 | INFO     | -- intersect: 6106706536.761995
[2025-07-26 00:03:26] 2025-07-26 04:02:47,407 | INFO     | current memory leak: -3.48 B/s (using 261 data points, chi2=0.10)
[2025-07-26 00:03:26] 2025-07-26 04:02:47,417 | INFO     | could have reported an average CPU frequency of 2676 MHz (13 samples)
[2025-07-26 00:03:26] 2025-07-26 04:02:47,417 | INFO     | ..............................
[2025-07-26 00:03:26] 2025-07-26 04:02:47,417 | INFO     | . Timing measurements:
[2025-07-26 00:03:26] 2025-07-26 04:02:47,417 | INFO     | . get job = 0 s
[2025-07-26 00:03:26] 2025-07-26 04:02:47,417 | INFO     | . initial setup = 3 s
[2025-07-26 00:03:26] 2025-07-26 04:02:47,417 | INFO     | . payload setup = 45 s
[2025-07-26 00:03:26] 2025-07-26 04:02:47,417 | INFO     | . stage-in = 0 s
[2025-07-26 00:03:26] 2025-07-26 04:02:47,418 | INFO     | . payload execution = 17787 s
[2025-07-26 00:03:26] 2025-07-26 04:02:47,418 | INFO     | . stage-out = 7 s
[2025-07-26 00:03:26] 2025-07-26 04:02:47,431 | INFO     | . log creation = 1 s
[2025-07-26 00:03:26] 2025-07-26 04:02:47,431 | INFO     | ..............................
[2025-07-26 00:03:26] 2025-07-26 04:02:48,308 | INFO     | 
[2025-07-26 00:03:26] 2025-07-26 04:02:48,308 | INFO     | job summary report
[2025-07-26 00:03:26] 2025-07-26 04:02:48,308 | INFO     | --------------------------------------------------
[2025-07-26 00:03:26] 2025-07-26 04:02:48,308 | INFO     | PanDA job id: 6741713085
[2025-07-26 00:03:26] 2025-07-26 04:02:48,309 | INFO     | task id: 45697453
[2025-07-26 00:03:26] 2025-07-26 04:02:48,310 | INFO     | errors: (none)
[2025-07-26 00:03:26] 2025-07-26 04:02:48,310 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-26 00:03:26] 2025-07-26 04:02:48,310 | INFO     | pilot state: finished 
[2025-07-26 00:03:26] 2025-07-26 04:02:48,310 | INFO     | transexitcode: 0
[2025-07-26 00:03:26] 2025-07-26 04:02:48,310 | INFO     | exeerrorcode: 0
[2025-07-26 00:03:26] 2025-07-26 04:02:48,310 | INFO     | exeerrordiag: 
[2025-07-26 00:03:26] 2025-07-26 04:02:48,310 | INFO     | exitcode: 0
[2025-07-26 00:03:26] 2025-07-26 04:02:48,311 | INFO     | exitmsg: OK
[2025-07-26 00:03:26] 2025-07-26 04:02:48,315 | INFO     | cpuconsumptiontime: 63693 s
[2025-07-26 00:03:26] 2025-07-26 04:02:48,315 | INFO     | nevents: 400
[2025-07-26 00:03:26] 2025-07-26 04:02:48,315 | INFO     | neventsw: 0
[2025-07-26 00:03:26] 2025-07-26 04:02:48,315 | INFO     | pid: 667668
[2025-07-26 00:03:26] 2025-07-26 04:02:48,315 | INFO     | pgrp: 667668
[2025-07-26 00:03:26] 2025-07-26 04:02:48,315 | INFO     | corecount: 10
[2025-07-26 00:03:26] 2025-07-26 04:02:48,318 | INFO     | event service: False
[2025-07-26 00:03:26] 2025-07-26 04:02:48,318 | INFO     | sizes: {0: 2396735, 1: 2397336, 2: 2397448, 3: 2397647, 14: 2397647, 25: 2397675, 36: 2397887, 37: 2398121, 48: 2398149, 17837: 2430117, 17845: 2439143, 17846: 243
[2025-07-26 00:03:26] 2025-07-26 04:02:48,318 | INFO     | --------------------------------------------------
[2025-07-26 00:03:26] 2025-07-26 04:02:48,318 | INFO     | 
[2025-07-26 00:03:26] 2025-07-26 04:02:48,318 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-07-26 00:03:26] 2025-07-26 04:02:48,524 | INFO     | PID=642927 has CPU usage=4.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-07-26 00:03:26] 2025-07-26 04:02:48,525 | INFO     | .. there are 69 such processes running
[2025-07-26 00:03:26] 2025-07-26 04:02:48,533 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-26 00:03:26] 2025-07-26 04:02:48,533 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-26 00:03:26] 2025-07-26 04:02:48,533 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-26 00:03:26] 2025-07-26 04:02:48,533 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-26 00:03:26] 2025-07-26 04:02:48,534 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-26 00:03:26] 2025-07-26 04:02:48,535 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-26 00:03:26] 2025-07-26 04:02:48,535 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-26 00:03:26] 2025-07-26 04:02:48,535 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-26 00:03:26] 2025-07-26 04:02:48,535 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-26 00:03:26] 2025-07-26 04:02:48,535 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-26 00:03:26] 2025-07-26 04:02:48,535 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-26 00:03:26] 2025-07-26 04:02:48,535 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-26 00:03:26] 2025-07-26 04:02:48,535 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-26 00:03:26] 2025-07-26 04:02:48,536 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-26 00:03:26] 2025-07-26 04:02:48,536 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-26 00:03:26] 2025-07-26 04:02:48,536 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-26 00:03:26] 2025-07-26 04:02:48,536 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-26 00:03:26] 2025-07-26 04:02:48,536 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-26 00:03:26] 2025-07-26 04:02:48,536 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-26 00:03:26] 2025-07-26 04:02:48,536 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-26 00:03:26] 2025-07-26 04:02:48,536 | INFO     | job 6741713085 has completed (purged errors)
[2025-07-26 00:03:26] 2025-07-26 04:02:48,536 | INFO     | overall cleanup function is called
[2025-07-26 00:03:26] 2025-07-26 04:02:49,557 | INFO     | --- collectZombieJob: --- 10, [667668]
[2025-07-26 00:03:26] 2025-07-26 04:02:49,557 | INFO     | zombie collector waiting for pid 667668
[2025-07-26 00:03:26] 2025-07-26 04:02:49,557 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-26 00:03:26] 2025-07-26 04:02:49,557 | INFO     | collected zombie processes
[2025-07-26 00:03:26] 2025-07-26 04:02:49,557 | INFO     | will attempt to kill all subprocesses of pid=667668
[2025-07-26 00:03:26] 2025-07-26 04:02:51,907 | INFO     | process IDs to be killed: [667668] (in reverse order)
[2025-07-26 00:03:26] 2025-07-26 04:02:52,403 | WARNING  | found no corresponding commands to process id(s)
[2025-07-26 00:03:26] 2025-07-26 04:02:52,403 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-26 00:03:26] 2025-07-26 04:02:52,476 | INFO     | did not find any defunct processes belonging to 667668
[2025-07-26 00:03:26] 2025-07-26 04:02:52,648 | INFO     | did not find any defunct processes belonging to 667668
[2025-07-26 00:03:26] 2025-07-26 04:02:52,649 | INFO     | ready for new job
[2025-07-26 00:03:26] 2025-07-26 04:02:52,649 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-26 00:03:26] 2025-07-26 04:02:52,660 | INFO     | ***************************************
[2025-07-26 00:03:26] 2025-07-26 04:02:52,660 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-26 00:03:26] 2025-07-26 04:02:52,660 | INFO     | ***************************************
[2025-07-26 00:03:26] 2025-07-26 04:02:52,660 | INFO     | 
[2025-07-26 00:03:26] 2025-07-26 04:02:52,717 | INFO     | architecture information:
[2025-07-26 00:03:26] 2025-07-26 04:02:52,761 | INFO     | executing command: cat /etc/os-release
[2025-07-26 00:03:26] 2025-07-26 04:02:52,894 | INFO     | cat /etc/os-release:
[2025-07-26 00:03:26] NAME="CentOS Linux"
[2025-07-26 00:03:26] VERSION="7 (Core)"
[2025-07-26 00:03:26] ID="centos"
[2025-07-26 00:03:26] ID_LIKE="rhel fedora"
[2025-07-26 00:03:26] VERSION_ID="7"
[2025-07-26 00:03:26] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-26 00:03:26] ANSI_COLOR="0;31"
[2025-07-26 00:03:26] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-26 00:03:26] HOME_URL="https://www.centos.org/"
[2025-07-26 00:03:26] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-26 00:03:26] 
[2025-07-26 00:03:26] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-26 00:03:26] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-26 00:03:26] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-26 00:03:26] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-26 00:03:26] 
[2025-07-26 00:03:26] 2025-07-26 04:02:52,894 | INFO     | ***************************************
[2025-07-26 00:03:26] 2025-07-26 04:02:53,398 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-07-26 00:03:26] 2025-07-26 04:02:53,462 | INFO     | sufficient remaining disk space (75682021376 B)
[2025-07-26 00:03:26] 2025-07-26 04:02:53,463 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-26 00:03:26] 2025-07-26 04:02:53,463 | INFO     | current server update state: UPDATING_FINAL
[2025-07-26 00:03:26] 2025-07-26 04:02:53,463 | INFO     | update_server=False
[2025-07-26 00:03:26] 2025-07-26 04:02:53,463 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-26 00:03:26] 2025-07-26 04:02:53,463 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-26 00:03:26] 2025-07-26 04:02:53,464 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-26 00:03:26] 2025-07-26 04:02:53,464 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-26 00:03:26] 2025-07-26 04:02:53,903 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-26 00:03:26] 2025-07-26 04:02:53,903 | INFO     | aborting loop
[2025-07-26 00:03:26] 2025-07-26 04:02:53,986 | INFO     | all payload control threads have been joined
[2025-07-26 00:03:26] 2025-07-26 04:02:54,403 | INFO     | all job control threads have been joined
[2025-07-26 00:03:26] 2025-07-26 04:02:54,469 | INFO     | [job] retrieve thread has finished
[2025-07-26 00:03:26] 2025-07-26 04:02:54,470 | INFO     | [job] queue monitor thread has finished
[2025-07-26 00:03:26] 2025-07-26 04:02:54,540 | INFO     | [data] copytool_in thread has finished
[2025-07-26 00:03:26] 2025-07-26 04:02:54,574 | INFO     | all data control threads have been joined
[2025-07-26 00:03:26] 2025-07-26 04:02:54,707 | INFO     | [payload] validate_pre thread has finished
[2025-07-26 00:03:26] 2025-07-26 04:02:54,711 | INFO     | [payload] failed_post thread has finished
[2025-07-26 00:03:26] 2025-07-26 04:02:54,919 | INFO     | [job] job monitor thread has finished
[2025-07-26 00:03:26] 2025-07-26 04:02:54,992 | INFO     | [payload] control thread has finished
[2025-07-26 00:03:26] 2025-07-26 04:02:54,996 | INFO     | [payload] execute_payloads thread has finished
[2025-07-26 00:03:26] 2025-07-26 04:02:54,996 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-26 00:03:26] 2025-07-26 04:02:55,251 | INFO     | [job] validate thread has finished
[2025-07-26 00:03:26] 2025-07-26 04:02:55,287 | INFO     | [job] create_data_payload thread has finished
[2025-07-26 00:03:26] 2025-07-26 04:02:55,342 | INFO     | [payload] validate_post thread has finished
[2025-07-26 00:03:26] 2025-07-26 04:02:55,409 | INFO     | [job] control thread has finished
[2025-07-26 00:03:26] 2025-07-26 04:02:55,471 | INFO     | [data] copytool_out thread has finished
[2025-07-26 00:03:26] 2025-07-26 04:02:55,580 | INFO     | [data] control thread has finished
[2025-07-26 00:03:26] 2025-07-26 04:02:57,493 | INFO     | [data] queue_monitor thread has finished
[2025-07-26 00:03:26] 2025-07-26 04:02:58,511 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140315292858176)>', '<ExcThread(monitor, started 140314366965504)>']
[2025-07-26 00:03:26] 2025-07-26 04:03:03,553 | INFO     | all workflow threads have been joined
[2025-07-26 00:03:26] 2025-07-26 04:03:03,554 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-26 00:03:26] 2025-07-26 04:03:03,554 | INFO     | traces error code: 0
[2025-07-26 00:03:26] 2025-07-26 04:03:03,555 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-26 00:03:26] 2025-07-26 04:03:16,963 [wrapper] supervise_pilot (15 min periods counter: 21)
[2025-07-26 00:03:26] 2025-07-26 04:03:23,657 | INFO     | PID=642927 has CPU usage=5.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-07-26 00:03:26] 2025-07-26 04:03:23,674 | INFO     | .. there are 69 such processes running
[2025-07-26 00:03:26] 2025-07-26 04:03:23,675 | INFO     | found 0 job(s) in 20 queues
[2025-07-26 00:03:26] 2025-07-26 04:03:23,675 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-26 00:03:26] 2025-07-26 04:03:23,675 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-26 00:03:26] 2025-07-26 04:03:23,675 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-26 00:03:26] 2025-07-26 04:03:23,675 | INFO     | [monitor] control thread has ended
[2025-07-26 00:03:26] 2025-07-26 04:03:24,615 [wrapper] ==== pilot stdout END ====
[2025-07-26 00:03:26] 2025-07-26 04:03:24,670 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-26 00:03:26] 2025-07-26 04:03:24,729 [wrapper] pilotpid: 642927
[2025-07-26 00:03:26] 2025-07-26 04:03:24,781 [wrapper] Pilot exit status: 0
[2025-07-26 00:03:26] 2025-07-26 04:03:24,953 [wrapper] pandaids: 6741713085
[2025-07-26 00:03:26] 2025-07-26 04:03:25,959 [wrapper] cleanup supervisor_pilot 3386512 642928
[2025-07-26 00:03:26] 2025-07-26 04:03:25,974 [wrapper] Test setup, not cleaning
[2025-07-26 00:03:26] 2025-07-26 04:03:25,991 [wrapper] apfmon messages muted
[2025-07-26 00:03:26] 2025-07-26 04:03:26,011 [wrapper] ==== wrapper stdout END ====
[2025-07-26 00:03:26] 2025-07-26 04:03:26,034 [wrapper] ==== wrapper stderr END ====
[2025-07-26 00:03:26]  *** Error codes and diagnostics ***
[2025-07-26 00:03:26]     "exeErrorCode": 0,
[2025-07-26 00:03:26]     "exeErrorDiag": "",
[2025-07-26 00:03:26]     "pilotErrorCode": 0,
[2025-07-26 00:03:26]     "pilotErrorDiag": "",
[2025-07-26 00:03:26]  *** Listing of results directory ***
[2025-07-26 00:03:26] total 573220
[2025-07-26 00:03:26] -rw-r--r--. 1 boincer umatlas    530466 Jul 21 22:37 pilot3.tar.gz
[2025-07-26 00:03:26] -rwx------. 1 boincer umatlas     36292 Jul 21 22:44 runpilot2-wrapper.sh
[2025-07-26 00:03:26] -rw-r--r--. 1 boincer umatlas      5112 Jul 21 22:44 queuedata.json
[2025-07-26 00:03:26] -rw-r--r--. 1 boincer umatlas       100 Jul 25 19:02 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-26 00:03:26] -rwxr-xr-x. 1 boincer umatlas      7986 Jul 25 19:02 run_atlas
[2025-07-26 00:03:26] -rw-r--r--. 1 boincer umatlas       105 Jul 25 19:02 job.xml
[2025-07-26 00:03:26] -rw-r--r--. 2 boincer umatlas 319134509 Jul 25 19:02 EVNT.45697451._000144.pool.root.1
[2025-07-26 00:03:26] -rw-r--r--. 2 boincer umatlas     15095 Jul 25 19:02 start_atlas.sh
[2025-07-26 00:03:26] drwxrwx--x. 2 boincer umatlas      4096 Jul 25 19:02 shared
[2025-07-26 00:03:26] -rw-r--r--. 2 boincer umatlas    542899 Jul 25 19:02 input.tar.gz
[2025-07-26 00:03:26] -rw-r--r--. 1 boincer umatlas         0 Jul 25 19:02 boinc_lockfile
[2025-07-26 00:03:26] -rw-r--r--. 1 boincer umatlas      2634 Jul 25 19:02 pandaJob.out
[2025-07-26 00:03:26] -rw-------. 1 boincer umatlas    980001 Jul 25 19:03 agis_schedconf.cvmfs.json
[2025-07-26 00:03:26] drwx------. 4 boincer umatlas      4096 Jul 25 19:03 pilot3
[2025-07-26 00:03:26] -rw-r--r--. 1 boincer umatlas      6840 Jul 25 23:59 init_data.xml
[2025-07-26 00:03:26] -rw-------. 1 boincer umatlas 260540117 Jul 26 00:00 HITS.45697453._003591.pool.root.1
[2025-07-26 00:03:26] -rw-r--r--. 1 boincer umatlas       531 Jul 26 00:00 boinc_task_state.xml
[2025-07-26 00:03:26] -rw-------. 1 boincer umatlas      1056 Jul 26 00:01 memory_monitor_summary.json
[2025-07-26 00:03:26] -rw-------. 1 boincer umatlas   1593052 Jul 26 00:02 agis_ddmendpoints.agis.ALL.json
[2025-07-26 00:03:26] -rw-------. 1 boincer umatlas    443681 Jul 26 00:02 log.45697453._003591.job.log.tgz.1
[2025-07-26 00:03:26] -rw-------. 1 boincer umatlas      7821 Jul 26 00:02 heartbeat.json
[2025-07-26 00:03:26] -rw-------. 1 boincer umatlas       822 Jul 26 00:03 pilotlog.txt
[2025-07-26 00:03:26] -rw-------. 1 boincer umatlas        95 Jul 26 00:03 pilot_heartbeat.json
[2025-07-26 00:03:26] -rw-r--r--. 1 boincer umatlas      8192 Jul 26 00:03 boinc_mmap_file
[2025-07-26 00:03:26] -rw-r--r--. 1 boincer umatlas        28 Jul 26 00:03 wrapper_checkpoint.txt
[2025-07-26 00:03:26] -rw-------. 1 boincer umatlas   1271542 Jul 26 00:03 log.45697453._003591.job.log.1
[2025-07-26 00:03:26] -rw-------. 1 boincer umatlas       357 Jul 26 00:03 output.list
[2025-07-26 00:03:26] -rw-r--r--. 1 boincer umatlas       620 Jul 26 00:03 runtime_log
[2025-07-26 00:03:26] -rw-------. 1 boincer umatlas   1730560 Jul 26 00:03 result.tar.gz
[2025-07-26 00:03:26] -rw-r--r--. 1 boincer umatlas      8648 Jul 26 00:03 runtime_log.err
[2025-07-26 00:03:26] -rw-------. 1 boincer umatlas       656 Jul 26 00:03 Eb0NDmVAIy7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmc5HLDm638fJm.diag
[2025-07-26 00:03:26] -rw-r--r--. 1 boincer umatlas     21149 Jul 26 00:03 stderr.txt
[2025-07-26 00:03:26] HITS file was successfully produced:
[2025-07-26 00:03:26] -rw-------. 1 boincer umatlas 260540117 Jul 26 00:00 shared/HITS.pool.root.1
[2025-07-26 00:03:26]  *** Contents of shared directory: ***
[2025-07-26 00:03:26] total 568336
[2025-07-26 00:03:26] -rw-r--r--. 2 boincer umatlas 319134509 Jul 25 19:02 ATLAS.root_0
[2025-07-26 00:03:26] -rw-r--r--. 2 boincer umatlas     15095 Jul 25 19:02 start_atlas.sh
[2025-07-26 00:03:26] -rw-r--r--. 2 boincer umatlas    542899 Jul 25 19:02 input.tar.gz
[2025-07-26 00:03:26] -rw-------. 1 boincer umatlas 260540117 Jul 26 00:00 HITS.pool.root.1
[2025-07-26 00:03:26] -rw-------. 1 boincer umatlas   1730560 Jul 26 00:03 result.tar.gz
00:03:28 (632679): run_atlas exited; CPU time 64702.451663
00:03:28 (632679): called boinc_finish(0)

</stderr_txt>
]]>

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