Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
18:49:00 (2239527): wrapper (7.7.26015): starting
18:49:00 (2239527): wrapper: running run_atlas (--nthreads 8)
[2025-07-25 18:49:00] Arguments: --nthreads 8
[2025-07-25 18:49:00] Threads: 8
[2025-07-25 18:49:00] Checking for CVMFS
[2025-07-25 18:49:00] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-25 18:49:01] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-25 18:49:01] Running cvmfs_config stat atlas.cern.ch
[2025-07-25 18:49:01] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-25 18:49:01] 2.13.1.0 1619052 10695 246716 148756 2 473 39361602 40960000 16090 16776704 0 61700139 99.599 75806241 38071 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-07-25 18:49:01] CVMFS is ok
[2025-07-25 18:49:01] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-25 18:49:01] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-25 18:49:01] Further information can be found at the LHC@home message board.
[2025-07-25 18:49:01] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-25 18:49:01] Checking for apptainer binary...
[2025-07-25 18:49:01] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-25 18:49:01] Running /usr/bin/apptainer --version
[2025-07-25 18:49:01] apptainer version 1.4.1-1.el9
[2025-07-25 18:49:01] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-25 18:49:01] c-212-15.aglt2.org
[2025-07-25 18:49:01] apptainer works
[2025-07-25 18:49:01] Set ATHENA_PROC_NUMBER=8
[2025-07-25 18:49:01] Set ATHENA_CORE_NUMBER=8
[2025-07-25 18:49:01] Starting ATLAS job with PandaID=6745054848
[2025-07-25 18:49:01] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-25 20:19:18]  *** The last 200 lines of the pilot log: ***
[2025-07-25 20:19:18] 2025-07-26 00:18:33,942 | INFO     | transferring file log.45743349._021431.job.log.tgz.1 from /tmp/boinchome/slots/2/PanDA_Pilot-6745054848/log.45743349._021431.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-07-25 20:19:18] 2025-07-26 00:18:33,943 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/2/PanDA_Pilot-6745054848/log.45743349._021431.job.log.tgz.1 /tmp/boinchome/slots/2/log.45743349._021431.job
[2025-07-25 20:19:18] 2025-07-26 00:18:33,966 | INFO     | adding to output.list: log.45743349._021431.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/a5/92/log.45743349._021431.job.log.tg
[2025-07-25 20:19:18] 2025-07-26 00:18:33,967 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-25 20:19:18] 2025-07-26 00:18:33,967 | INFO     | summary of transferred files:
[2025-07-25 20:19:18] 2025-07-26 00:18:33,967 | INFO     |  -- lfn=log.45743349._021431.job.log.tgz.1, status_code=0, status=transferred
[2025-07-25 20:19:18] 2025-07-26 00:18:33,967 | INFO     | stage-out finished correctly
[2025-07-25 20:19:18] 2025-07-26 00:18:37,120 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-25 20:19:18] 2025-07-26 00:18:39,048 | INFO     | job 6745054848 has state=finished
[2025-07-25 20:19:18] 2025-07-26 00:18:39,049 | INFO     | preparing for final server update for job 6745054848 in state='finished'
[2025-07-25 20:19:18] 2025-07-26 00:18:39,057 | INFO     | this job has now completed (state=finished)
[2025-07-25 20:19:18] 2025-07-26 00:18:39,058 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-25 20:19:18] 2025-07-26 00:18:39,059 | INFO     | log transfer has been attempted: DONE
[2025-07-25 20:19:18] 2025-07-26 00:18:39,059 | INFO     | job 6745054848 has finished - writing final server update
[2025-07-25 20:19:18] 2025-07-26 00:18:39,059 | INFO     | total number of processed events: 400 (read)
[2025-07-25 20:19:18] 2025-07-26 00:18:39,067 | INFO     | executing command: lscpu
[2025-07-25 20:19:18] 2025-07-26 00:18:39,101 | WARNING  | process 2255286 can no longer be monitored (due to stat problems) - aborting
[2025-07-25 20:19:18] 2025-07-26 00:18:39,101 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6745054848/memory_monitor_summary.json (trf name=prmon)
[2025-07-25 20:19:18] 2025-07-26 00:18:39,102 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6745054848/memory_monitor_summary.json (trf name=prmon)
[2025-07-25 20:19:18] 2025-07-26 00:18:39,104 | INFO     | payload log (log.EVNTtoHITS) within allowed size limit (2147483648 B): 3583137 B
[2025-07-25 20:19:18] 2025-07-26 00:18:39,104 | INFO     | payload log (payload.stdout) within allowed size limit (2147483648 B): 16751 B
[2025-07-25 20:19:18] 2025-07-26 00:18:39,104 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-07-25 20:19:18] 2025-07-26 00:18:39,127 | INFO     | sufficient remaining disk space (128757792768 B)
[2025-07-25 20:19:18] 2025-07-26 00:18:39,129 | INFO     | work directory size check will use 2537553920 B as a max limit (10% grace limit added)
[2025-07-25 20:19:18] 2025-07-26 00:18:39,131 | INFO     | size of work directory /tmp/boinchome/slots/2/PanDA_Pilot-6745054848: 3887804 B (within 2537553920 B limit)
[2025-07-25 20:19:18] 2025-07-26 00:18:39,132 | INFO     | pfn file=/tmp/boinchome/slots/2/PanDA_Pilot-6745054848/HITS.45743349._021431.pool.root.1 does not exist (skip from workdir size calculation)
[2025-07-25 20:19:18] 2025-07-26 00:18:39,132 | INFO     | total size of present files: 0 B (workdir size: 3887804 B)
[2025-07-25 20:19:18] 2025-07-26 00:18:39,132 | INFO     | output file size check: skipping output file /tmp/boinchome/slots/2/PanDA_Pilot-6745054848/HITS.45743349._021431.pool.root.1 since it does not exist
[2025-07-25 20:19:18] 2025-07-26 00:18:39,178 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-25 20:19:18] 2025-07-26 00:18:39,682 | INFO     | number of running child processes to parent process 2255286: 1
[2025-07-25 20:19:18] 2025-07-26 00:18:39,683 | INFO     | maximum number of monitored processes: 6
[2025-07-25 20:19:18] 2025-07-26 00:18:42,188 | INFO     | monitor loop #387: job 0:6745054848 is in state 'finished'
[2025-07-25 20:19:18] 2025-07-26 00:18:42,188 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-25 20:19:18] 2025-07-26 00:18:44,690 | INFO     | monitor loop #388: job 0:6745054848 is in state 'finished'
[2025-07-25 20:19:18] 2025-07-26 00:18:44,691 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-25 20:19:18] 2025-07-26 00:18:45,419 | INFO     | CPU arch script returned: x86-64-v3
[2025-07-25 20:19:18] 2025-07-26 00:18:45,451 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 3130.1429374999993
[2025-07-25 20:19:18] 2025-07-26 00:18:45,465 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6745054848/memory_monitor_summary.json (trf name=prmon)
[2025-07-25 20:19:18] 2025-07-26 00:18:45,466 | INFO     | extracted standard info from prmon json
[2025-07-25 20:19:18] 2025-07-26 00:18:45,466 | INFO     | extracted standard memory fields from prmon json
[2025-07-25 20:19:18] 2025-07-26 00:18:45,466 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-25 20:19:18] 2025-07-26 00:18:45,466 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-25 20:19:18] 2025-07-26 00:18:45,467 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-25 20:19:18] 2025-07-26 00:18:45,468 | INFO     | fitting pss+swap vs Time
[2025-07-25 20:19:18] 2025-07-26 00:18:45,468 | INFO     | sum of square deviations: 158737860.0
[2025-07-25 20:19:18] 2025-07-26 00:18:45,469 | INFO     | sum of deviations: -12574737457.0
[2025-07-25 20:19:18] 2025-07-26 00:18:45,469 | INFO     | mean x: 1753486517.5
[2025-07-25 20:19:18] 2025-07-26 00:18:45,469 | INFO     | mean y: 2611746.725
[2025-07-25 20:19:18] 2025-07-26 00:18:45,469 | INFO     | -- intersect: 138908557637.33823
[2025-07-25 20:19:18] 2025-07-26 00:18:45,469 | INFO     | intersect: 138908557637.33823
[2025-07-25 20:19:18] 2025-07-26 00:18:45,469 | INFO     | chi2: 0.10574283979541022
[2025-07-25 20:19:18] 2025-07-26 00:18:45,469 | INFO     | -- intersect: 138908557637.33823
[2025-07-25 20:19:18] 2025-07-26 00:18:45,469 | INFO     | current memory leak: -79.22 B/s (using 80 data points, chi2=0.11)
[2025-07-25 20:19:18] 2025-07-26 00:18:45,470 | INFO     | could have reported an average CPU frequency of 3138 MHz (6 samples)
[2025-07-25 20:19:18] 2025-07-26 00:18:45,470 | INFO     | ..............................
[2025-07-25 20:19:18] 2025-07-26 00:18:45,470 | INFO     | . Timing measurements:
[2025-07-25 20:19:18] 2025-07-26 00:18:45,470 | INFO     | . get job = 0 s
[2025-07-25 20:19:18] 2025-07-26 00:18:45,470 | INFO     | . initial setup = 2 s
[2025-07-25 20:19:18] 2025-07-26 00:18:45,470 | INFO     | . payload setup = 13 s
[2025-07-25 20:19:18] 2025-07-26 00:18:45,470 | INFO     | . stage-in = 0 s
[2025-07-25 20:19:18] 2025-07-26 00:18:45,470 | INFO     | . payload execution = 5316 s
[2025-07-25 20:19:18] 2025-07-26 00:18:45,470 | INFO     | . stage-out = 0 s
[2025-07-25 20:19:18] 2025-07-26 00:18:45,470 | INFO     | . log creation = 0 s
[2025-07-25 20:19:18] 2025-07-26 00:18:45,470 | INFO     | ..............................
[2025-07-25 20:19:18] 2025-07-26 00:18:45,549 | INFO     | 
[2025-07-25 20:19:18] 2025-07-26 00:18:45,549 | INFO     | job summary report
[2025-07-25 20:19:18] 2025-07-26 00:18:45,549 | INFO     | --------------------------------------------------
[2025-07-25 20:19:18] 2025-07-26 00:18:45,549 | INFO     | PanDA job id: 6745054848
[2025-07-25 20:19:18] 2025-07-26 00:18:45,550 | INFO     | task id: 45743349
[2025-07-25 20:19:18] 2025-07-26 00:18:45,550 | INFO     | errors: (none)
[2025-07-25 20:19:18] 2025-07-26 00:18:45,550 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-25 20:19:18] 2025-07-26 00:18:45,550 | INFO     | pilot state: finished 
[2025-07-25 20:19:18] 2025-07-26 00:18:45,550 | INFO     | transexitcode: 0
[2025-07-25 20:19:18] 2025-07-26 00:18:45,550 | INFO     | exeerrorcode: 0
[2025-07-25 20:19:18] 2025-07-26 00:18:45,550 | INFO     | exeerrordiag: 
[2025-07-25 20:19:18] 2025-07-26 00:18:45,550 | INFO     | exitcode: 0
[2025-07-25 20:19:18] 2025-07-26 00:18:45,550 | INFO     | exitmsg: OK
[2025-07-25 20:19:18] 2025-07-26 00:18:45,550 | INFO     | cpuconsumptiontime: 36104 s
[2025-07-25 20:19:18] 2025-07-26 00:18:45,550 | INFO     | nevents: 400
[2025-07-25 20:19:18] 2025-07-26 00:18:45,550 | INFO     | neventsw: 0
[2025-07-25 20:19:18] 2025-07-26 00:18:45,550 | INFO     | pid: 2255286
[2025-07-25 20:19:18] 2025-07-26 00:18:45,550 | INFO     | pgrp: 2255286
[2025-07-25 20:19:18] 2025-07-26 00:18:45,550 | INFO     | corecount: 8
[2025-07-25 20:19:18] 2025-07-26 00:18:45,550 | INFO     | event service: False
[2025-07-25 20:19:18] 2025-07-26 00:18:45,550 | INFO     | sizes: {0: 2396645, 1: 2397501, 9: 2397763, 12: 2397791, 5333: 2424071, 5334: 2433069, 5337: 2433253, 5345: 2433475}
[2025-07-25 20:19:18] 2025-07-26 00:18:45,551 | INFO     | --------------------------------------------------
[2025-07-25 20:19:18] 2025-07-26 00:18:45,551 | INFO     | 
[2025-07-25 20:19:18] 2025-07-26 00:18:45,551 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-07-25 20:19:18] 2025-07-26 00:18:45,583 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-25 20:19:18] 2025-07-26 00:18:45,583 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-25 20:19:18] 2025-07-26 00:18:45,583 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-25 20:19:18] 2025-07-26 00:18:45,583 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-25 20:19:18] 2025-07-26 00:18:45,583 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-25 20:19:18] 2025-07-26 00:18:45,583 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-25 20:19:18] 2025-07-26 00:18:45,584 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-25 20:19:18] 2025-07-26 00:18:45,584 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-25 20:19:18] 2025-07-26 00:18:45,584 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-25 20:19:18] 2025-07-26 00:18:45,584 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-25 20:19:18] 2025-07-26 00:18:45,584 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-25 20:19:18] 2025-07-26 00:18:45,584 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-25 20:19:18] 2025-07-26 00:18:45,584 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-25 20:19:18] 2025-07-26 00:18:45,584 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-25 20:19:18] 2025-07-26 00:18:45,584 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-25 20:19:18] 2025-07-26 00:18:45,584 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-25 20:19:18] 2025-07-26 00:18:45,584 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-25 20:19:18] 2025-07-26 00:18:45,585 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-25 20:19:18] 2025-07-26 00:18:45,585 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-25 20:19:18] 2025-07-26 00:18:45,585 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-25 20:19:18] 2025-07-26 00:18:45,585 | INFO     | job 6745054848 has completed (purged errors)
[2025-07-25 20:19:18] 2025-07-26 00:18:45,585 | INFO     | overall cleanup function is called
[2025-07-25 20:19:18] 2025-07-26 00:18:46,594 | INFO     | --- collectZombieJob: --- 10, [2255286]
[2025-07-25 20:19:18] 2025-07-26 00:18:46,595 | INFO     | zombie collector waiting for pid 2255286
[2025-07-25 20:19:18] 2025-07-26 00:18:46,595 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-25 20:19:18] 2025-07-26 00:18:46,595 | INFO     | collected zombie processes
[2025-07-25 20:19:18] 2025-07-26 00:18:46,595 | INFO     | will attempt to kill all subprocesses of pid=2255286
[2025-07-25 20:19:18] 2025-07-26 00:18:47,038 | INFO     | process IDs to be killed: [2255286] (in reverse order)
[2025-07-25 20:19:18] 2025-07-26 00:18:47,187 | WARNING  | found no corresponding commands to process id(s)
[2025-07-25 20:19:18] 2025-07-26 00:18:47,187 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-25 20:19:18] 2025-07-26 00:18:47,251 | INFO     | did not find any defunct processes belonging to 2255286
[2025-07-25 20:19:18] 2025-07-26 00:18:47,269 | INFO     | did not find any defunct processes belonging to 2255286
[2025-07-25 20:19:18] 2025-07-26 00:18:47,270 | INFO     | ready for new job
[2025-07-25 20:19:18] 2025-07-26 00:18:47,270 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-25 20:19:18] 2025-07-26 00:18:47,280 | INFO     | ***************************************
[2025-07-25 20:19:18] 2025-07-26 00:18:47,280 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-25 20:19:18] 2025-07-26 00:18:47,280 | INFO     | ***************************************
[2025-07-25 20:19:18] 2025-07-26 00:18:47,280 | INFO     | 
[2025-07-25 20:19:18] 2025-07-26 00:18:47,331 | INFO     | architecture information:
[2025-07-25 20:19:18] 2025-07-26 00:18:47,332 | INFO     | executing command: cat /etc/os-release
[2025-07-25 20:19:18] 2025-07-26 00:18:47,357 | INFO     | cat /etc/os-release:
[2025-07-25 20:19:18] NAME="CentOS Linux"
[2025-07-25 20:19:18] VERSION="7 (Core)"
[2025-07-25 20:19:18] ID="centos"
[2025-07-25 20:19:18] ID_LIKE="rhel fedora"
[2025-07-25 20:19:18] VERSION_ID="7"
[2025-07-25 20:19:18] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-25 20:19:18] ANSI_COLOR="0;31"
[2025-07-25 20:19:18] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-25 20:19:18] HOME_URL="https://www.centos.org/"
[2025-07-25 20:19:18] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-25 20:19:18] 
[2025-07-25 20:19:18] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-25 20:19:18] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-25 20:19:18] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-25 20:19:18] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-25 20:19:18] 
[2025-07-25 20:19:18] 2025-07-26 00:18:47,357 | INFO     | ***************************************
[2025-07-25 20:19:18] 2025-07-26 00:18:47,862 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-07-25 20:19:18] 2025-07-26 00:18:47,890 | INFO     | sufficient remaining disk space (128761987072 B)
[2025-07-25 20:19:18] 2025-07-26 00:18:47,890 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-25 20:19:18] 2025-07-26 00:18:47,890 | INFO     | current server update state: UPDATING_FINAL
[2025-07-25 20:19:18] 2025-07-26 00:18:47,890 | INFO     | update_server=False
[2025-07-25 20:19:18] 2025-07-26 00:18:47,890 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-25 20:19:18] 2025-07-26 00:18:47,890 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-25 20:19:18] 2025-07-26 00:18:47,890 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-25 20:19:18] 2025-07-26 00:18:48,072 | INFO     | all payload control threads have been joined
[2025-07-25 20:19:18] 2025-07-26 00:18:48,198 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-25 20:19:18] 2025-07-26 00:18:48,199 | INFO     | aborting loop
[2025-07-25 20:19:18] 2025-07-26 00:18:48,896 | INFO     | [job] retrieve thread has finished
[2025-07-25 20:19:18] 2025-07-26 00:18:48,962 | INFO     | all data control threads have been joined
[2025-07-25 20:19:18] 2025-07-26 00:18:49,077 | INFO     | [payload] control thread has finished
[2025-07-25 20:19:18] 2025-07-26 00:18:49,204 | INFO     | [job] job monitor thread has finished
[2025-07-25 20:19:18] 2025-07-26 00:18:49,243 | INFO     | [payload] execute_payloads thread has finished
[2025-07-25 20:19:18] 2025-07-26 00:18:49,331 | INFO     | [job] validate thread has finished
[2025-07-25 20:19:18] 2025-07-26 00:18:49,414 | INFO     | all job control threads have been joined
[2025-07-25 20:19:18] 2025-07-26 00:18:49,701 | INFO     | [job] create_data_payload thread has finished
[2025-07-25 20:19:18] 2025-07-26 00:18:49,835 | INFO     | [data] copytool_in thread has finished
[2025-07-25 20:19:18] 2025-07-26 00:18:49,896 | INFO     | [data] copytool_out thread has finished
[2025-07-25 20:19:18] 2025-07-26 00:18:49,908 | INFO     | [payload] failed_post thread has finished
[2025-07-25 20:19:18] 2025-07-26 00:18:49,968 | INFO     | [data] control thread has finished
[2025-07-25 20:19:18] 2025-07-26 00:18:50,299 | INFO     | [payload] validate_pre thread has finished
[2025-07-25 20:19:18] 2025-07-26 00:18:50,306 | INFO     | [payload] validate_post thread has finished
[2025-07-25 20:19:18] 2025-07-26 00:18:50,421 | INFO     | [job] control thread has finished
[2025-07-25 20:19:18] 2025-07-26 00:18:50,564 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-25 20:19:18] 2025-07-26 00:18:51,570 | INFO     | [job] queue monitor thread has finished
[2025-07-25 20:19:18] 2025-07-26 00:18:51,897 | INFO     | [data] queue_monitor thread has finished
[2025-07-25 20:19:18] 2025-07-26 00:18:58,101 | INFO     | job.realtimelogging is not enabled
[2025-07-25 20:19:18] 2025-07-26 00:18:59,108 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-25 20:19:18] 2025-07-26 00:19:00,553 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140284305389376)>', '<ExcThread(monitor, started 140283656251136)>']
[2025-07-25 20:19:18] 2025-07-26 00:19:05,579 | INFO     | all workflow threads have been joined
[2025-07-25 20:19:18] 2025-07-26 00:19:05,580 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-25 20:19:18] 2025-07-26 00:19:05,580 | INFO     | traces error code: 0
[2025-07-25 20:19:18] 2025-07-26 00:19:05,580 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-25 20:19:18] 2025-07-26 00:19:16,395 [wrapper] supervise_pilot (15 min periods counter: 7)
[2025-07-25 20:19:18] 2025-07-26 00:19:17,944 | INFO     | PID=2243529 has CPU usage=6.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-25 20:19:18] 2025-07-26 00:19:17,945 | INFO     | .. there are 32 such processes running
[2025-07-25 20:19:18] 2025-07-26 00:19:17,946 | INFO     | found 0 job(s) in 20 queues
[2025-07-25 20:19:18] 2025-07-26 00:19:17,946 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-25 20:19:18] 2025-07-26 00:19:17,946 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-25 20:19:18] 2025-07-26 00:19:17,946 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-25 20:19:18] 2025-07-26 00:19:17,946 | INFO     | [monitor] control thread has ended
[2025-07-25 20:19:18] 2025-07-26 00:19:18,104 [wrapper] ==== pilot stdout END ====
[2025-07-25 20:19:18] 2025-07-26 00:19:18,112 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-25 20:19:18] 2025-07-26 00:19:18,117 [wrapper] pilotpid: 2243529
[2025-07-25 20:19:18] 2025-07-26 00:19:18,123 [wrapper] Pilot exit status: 0
[2025-07-25 20:19:18] 2025-07-26 00:19:18,142 [wrapper] pandaids: 6745054848
[2025-07-25 20:19:18] 2025-07-26 00:19:18,252 [wrapper] cleanup supervisor_pilot 2709655 2243530
[2025-07-25 20:19:18] 2025-07-26 00:19:18,258 [wrapper] Test setup, not cleaning
[2025-07-25 20:19:18] 2025-07-26 00:19:18,261 [wrapper] apfmon messages muted
[2025-07-25 20:19:18] 2025-07-26 00:19:18,267 [wrapper] ==== wrapper stdout END ====
[2025-07-25 20:19:18] 2025-07-26 00:19:18,271 [wrapper] ==== wrapper stderr END ====
[2025-07-25 20:19:18]  *** Error codes and diagnostics ***
[2025-07-25 20:19:18]     "exeErrorCode": 0,
[2025-07-25 20:19:18]     "exeErrorDiag": "",
[2025-07-25 20:19:18]     "pilotErrorCode": 0,
[2025-07-25 20:19:18]     "pilotErrorDiag": "",
[2025-07-25 20:19:18]  *** Listing of results directory ***
[2025-07-25 20:19:18] total 434796
[2025-07-25 20:19:18] -rw-r--r--. 1 boincer umatlas    530466 Jul 25 08:51 pilot3.tar.gz
[2025-07-25 20:19:18] -rw-r--r--. 1 boincer umatlas      5112 Jul 25 09:01 queuedata.json
[2025-07-25 20:19:18] -rwx------. 1 boincer umatlas     36292 Jul 25 09:05 runpilot2-wrapper.sh
[2025-07-25 20:19:18] -rw-r--r--. 1 boincer umatlas       100 Jul 25 18:49 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-25 20:19:18] -rwxr-xr-x. 1 boincer umatlas      7986 Jul 25 18:49 run_atlas
[2025-07-25 20:19:18] -rw-r--r--. 1 boincer umatlas       105 Jul 25 18:49 job.xml
[2025-07-25 20:19:18] -rw-r--r--. 2 boincer umatlas 232777714 Jul 25 18:49 EVNT.45743347._001231.pool.root.1
[2025-07-25 20:19:18] -rw-r--r--. 2 boincer umatlas     15095 Jul 25 18:49 start_atlas.sh
[2025-07-25 20:19:18] drwxrwx--x. 2 boincer umatlas      4096 Jul 25 18:49 shared
[2025-07-25 20:19:18] -rw-r--r--. 2 boincer umatlas    542891 Jul 25 18:49 input.tar.gz
[2025-07-25 20:19:18] -rw-r--r--. 1 boincer umatlas         0 Jul 25 18:49 boinc_lockfile
[2025-07-25 20:19:18] -rw-r--r--. 1 boincer umatlas      2562 Jul 25 18:49 pandaJob.out
[2025-07-25 20:19:18] -rw-------. 1 boincer umatlas    980001 Jul 25 18:49 agis_schedconf.cvmfs.json
[2025-07-25 20:19:18] -rw-------. 1 boincer umatlas   1593052 Jul 25 18:49 agis_ddmendpoints.agis.ALL.json
[2025-07-25 20:19:18] drwx------. 4 boincer umatlas      4096 Jul 25 18:49 pilot3
[2025-07-25 20:19:18] -rw-r--r--. 1 boincer umatlas      6941 Jul 25 20:10 init_data.xml
[2025-07-25 20:19:18] -rw-------. 1 boincer umatlas 206896401 Jul 25 20:18 HITS.45743349._021431.pool.root.1
[2025-07-25 20:19:18] -rw-r--r--. 1 boincer umatlas       529 Jul 25 20:18 boinc_task_state.xml
[2025-07-25 20:19:18] -rw-------. 1 boincer umatlas      1036 Jul 25 20:18 memory_monitor_summary.json
[2025-07-25 20:19:18] -rw-------. 1 boincer umatlas    323601 Jul 25 20:18 log.45743349._021431.job.log.tgz.1
[2025-07-25 20:19:18] -rw-------. 1 boincer umatlas      7780 Jul 25 20:18 heartbeat.json
[2025-07-25 20:19:18] -rw-r--r--. 1 boincer umatlas      8192 Jul 25 20:19 boinc_mmap_file
[2025-07-25 20:19:18] -rw-r--r--. 1 boincer umatlas        27 Jul 25 20:19 wrapper_checkpoint.txt
[2025-07-25 20:19:18] -rw-------. 1 boincer umatlas       823 Jul 25 20:19 pilotlog.txt
[2025-07-25 20:19:18] -rw-------. 1 boincer umatlas        95 Jul 25 20:19 pilot_heartbeat.json
[2025-07-25 20:19:18] -rw-------. 1 boincer umatlas    515007 Jul 25 20:19 log.45743349._021431.job.log.1
[2025-07-25 20:19:18] -rw-------. 1 boincer umatlas       357 Jul 25 20:19 output.list
[2025-07-25 20:19:18] -rw-r--r--. 1 boincer umatlas       620 Jul 25 20:19 runtime_log
[2025-07-25 20:19:18] -rw-------. 1 boincer umatlas    860160 Jul 25 20:19 result.tar.gz
[2025-07-25 20:19:18] -rw-r--r--. 1 boincer umatlas      8660 Jul 25 20:19 runtime_log.err
[2025-07-25 20:19:18] -rw-------. 1 boincer umatlas       652 Jul 25 20:19 3bTNDmDIXz7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmMbPLDmFgwq6m.diag
[2025-07-25 20:19:18] -rw-r--r--. 1 boincer umatlas     22745 Jul 25 20:19 stderr.txt
[2025-07-25 20:19:18] HITS file was successfully produced:
[2025-07-25 20:19:18] -rw-------. 1 boincer umatlas 206896401 Jul 25 20:18 shared/HITS.pool.root.1
[2025-07-25 20:19:18]  *** Contents of shared directory: ***
[2025-07-25 20:19:18] total 430768
[2025-07-25 20:19:18] -rw-r--r--. 2 boincer umatlas 232777714 Jul 25 18:49 ATLAS.root_0
[2025-07-25 20:19:18] -rw-r--r--. 2 boincer umatlas     15095 Jul 25 18:49 start_atlas.sh
[2025-07-25 20:19:18] -rw-r--r--. 2 boincer umatlas    542891 Jul 25 18:49 input.tar.gz
[2025-07-25 20:19:18] -rw-------. 1 boincer umatlas 206896401 Jul 25 20:18 HITS.pool.root.1
[2025-07-25 20:19:18] -rw-------. 1 boincer umatlas    860160 Jul 25 20:19 result.tar.gz
20:19:20 (2239527): run_atlas exited; CPU time 36264.545228
20:19:20 (2239527): called boinc_finish(0)

</stderr_txt>
]]>

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