Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
21:15:09 (3101070): wrapper (7.7.26015): starting
21:15:09 (3101070): wrapper: running run_atlas (--nthreads 12)
[2025-07-25 21:15:09] Arguments: --nthreads 12
[2025-07-25 21:15:09] Threads: 12
[2025-07-25 21:15:09] Checking for CVMFS
[2025-07-25 21:15:10] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-25 21:15:10] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-25 21:15:10] Running cvmfs_config stat atlas.cern.ch
[2025-07-25 21:15:10] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-25 21:15:10] 2.13.0.0 842134 16251 359260 148758 1 495 27012255 32935936 13700 16776704 0 37768303 99.668 69599214 33044 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-07-25 21:15:10] CVMFS is ok
[2025-07-25 21:15:10] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-25 21:15:10] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-25 21:15:10] Further information can be found at the LHC@home message board.
[2025-07-25 21:15:10] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-25 21:15:10] Checking for apptainer binary...
[2025-07-25 21:15:10] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-25 21:15:10] Running /usr/bin/apptainer --version
[2025-07-25 21:15:10] apptainer version 1.4.1-1.el9
[2025-07-25 21:15:10] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-25 21:15:10] c6-5-37-2.aglt2.org
[2025-07-25 21:15:10] apptainer works
[2025-07-25 21:15:10] Set ATHENA_PROC_NUMBER=12
[2025-07-25 21:15:10] Set ATHENA_CORE_NUMBER=12
[2025-07-25 21:15:10] Starting ATLAS job with PandaID=6745058704
[2025-07-25 21:15:10] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-25 22:41:56]  *** The last 200 lines of the pilot log: ***
[2025-07-25 22:41:56]  protocol_id=None
[2025-07-25 22:41:56]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-07-25 22:41:56]  replicas=None
[2025-07-25 22:41:56]  scope=mc23_13p6TeV
[2025-07-25 22:41:56]  status=None
[2025-07-25 22:41:56]  status_code=0
[2025-07-25 22:41:56]  storage_token=
[2025-07-25 22:41:56]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6745058704/log.45743349._024127.job.log.tgz.1
[2025-07-25 22:41:56]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/86/9d/log.45743349._024127.job.log.tgz.1
[2025-07-25 22:41:56]  workdir=None
[2025-07-25 22:41:56] ]
[2025-07-25 22:41:56] 2025-07-26 02:41:15,547 | INFO     | transferring file log.45743349._024127.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6745058704/log.45743349._024127.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-07-25 22:41:56] 2025-07-26 02:41:15,547 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6745058704/log.45743349._024127.job.log.tgz.1 /tmp/boinchome/slots/0/log.45743349._024127.job
[2025-07-25 22:41:56] 2025-07-26 02:41:15,574 | INFO     | adding to output.list: log.45743349._024127.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/86/9d/log.45743349._024127.job.log.tg
[2025-07-25 22:41:56] 2025-07-26 02:41:15,575 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-25 22:41:56] 2025-07-26 02:41:15,575 | INFO     | summary of transferred files:
[2025-07-25 22:41:56] 2025-07-26 02:41:15,575 | INFO     |  -- lfn=log.45743349._024127.job.log.tgz.1, status_code=0, status=transferred
[2025-07-25 22:41:56] 2025-07-26 02:41:15,575 | INFO     | stage-out finished correctly
[2025-07-25 22:41:56] 2025-07-26 02:41:16,476 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-25 22:41:56] 2025-07-26 02:41:16,778 | WARNING  | process 3111848 can no longer be monitored (due to stat problems) - aborting
[2025-07-25 22:41:56] 2025-07-26 02:41:16,778 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6745058704/memory_monitor_summary.json (trf name=prmon)
[2025-07-25 22:41:56] 2025-07-26 02:41:17,007 | INFO     | number of running child processes to parent process 3111848: 1
[2025-07-25 22:41:56] 2025-07-26 02:41:17,007 | INFO     | maximum number of monitored processes: 6
[2025-07-25 22:41:56] 2025-07-26 02:41:17,166 | INFO     | job 6745058704 has state=finished
[2025-07-25 22:41:56] 2025-07-26 02:41:17,166 | INFO     | preparing for final server update for job 6745058704 in state='finished'
[2025-07-25 22:41:56] 2025-07-26 02:41:17,166 | INFO     | this job has now completed (state=finished)
[2025-07-25 22:41:56] 2025-07-26 02:41:17,166 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-25 22:41:56] 2025-07-26 02:41:17,167 | INFO     | log transfer has been attempted: DONE
[2025-07-25 22:41:56] 2025-07-26 02:41:17,167 | INFO     | job 6745058704 has finished - writing final server update
[2025-07-25 22:41:56] 2025-07-26 02:41:17,167 | INFO     | total number of processed events: 400 (read)
[2025-07-25 22:41:56] 2025-07-26 02:41:17,169 | INFO     | executing command: lscpu
[2025-07-25 22:41:56] 2025-07-26 02:41:17,231 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-25 22:41:56] 2025-07-26 02:41:19,510 | INFO     | monitor loop #364: job 0:6745058704 is in state 'finished'
[2025-07-25 22:41:56] 2025-07-26 02:41:19,513 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-25 22:41:56] 2025-07-26 02:41:22,016 | INFO     | monitor loop #365: job 0:6745058704 is in state 'finished'
[2025-07-25 22:41:56] 2025-07-26 02:41:22,016 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-25 22:41:56] 2025-07-26 02:41:23,102 | INFO     | CPU arch script returned: x86-64-v4
[2025-07-25 22:41:56] 2025-07-26 02:41:23,113 | INFO     | found 28 cores (14 cores per socket, 2 sockets) HT, CPU MHz: 2661.749660714286
[2025-07-25 22:41:56] 2025-07-26 02:41:23,125 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6745058704/memory_monitor_summary.json (trf name=prmon)
[2025-07-25 22:41:56] 2025-07-26 02:41:23,126 | INFO     | extracted standard info from prmon json
[2025-07-25 22:41:56] 2025-07-26 02:41:23,126 | INFO     | extracted standard memory fields from prmon json
[2025-07-25 22:41:56] 2025-07-26 02:41:23,126 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-25 22:41:56] 2025-07-26 02:41:23,127 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-25 22:41:56] 2025-07-26 02:41:23,127 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-25 22:41:56] 2025-07-26 02:41:23,129 | INFO     | fitting pss+swap vs Time
[2025-07-25 22:41:56] 2025-07-26 02:41:23,130 | INFO     | sum of square deviations: 141540018.12987012
[2025-07-25 22:41:56] 2025-07-26 02:41:23,130 | INFO     | sum of deviations: -9852732019.506496
[2025-07-25 22:41:56] 2025-07-26 02:41:23,130 | INFO     | mean x: 1753495181.1558442
[2025-07-25 22:41:56] 2025-07-26 02:41:23,130 | INFO     | mean y: 2499914.7922077924
[2025-07-25 22:41:56] 2025-07-26 02:41:23,130 | INFO     | -- intersect: 122064926822.0169
[2025-07-25 22:41:56] 2025-07-26 02:41:23,131 | INFO     | intersect: 122064926822.0169
[2025-07-25 22:41:56] 2025-07-26 02:41:23,131 | INFO     | chi2: 0.1367969380547496
[2025-07-25 22:41:56] 2025-07-26 02:41:23,131 | INFO     | -- intersect: 122064926822.0169
[2025-07-25 22:41:56] 2025-07-26 02:41:23,131 | INFO     | current memory leak: -69.61 B/s (using 77 data points, chi2=0.14)
[2025-07-25 22:41:56] 2025-07-26 02:41:23,132 | INFO     | could have reported an average CPU frequency of 2777 MHz (6 samples)
[2025-07-25 22:41:56] 2025-07-26 02:41:23,132 | INFO     | ..............................
[2025-07-25 22:41:56] 2025-07-26 02:41:23,132 | INFO     | . Timing measurements:
[2025-07-25 22:41:56] 2025-07-26 02:41:23,132 | INFO     | . get job = 0 s
[2025-07-25 22:41:56] 2025-07-26 02:41:23,132 | INFO     | . initial setup = 2 s
[2025-07-25 22:41:56] 2025-07-26 02:41:23,132 | INFO     | . payload setup = 9 s
[2025-07-25 22:41:56] 2025-07-26 02:41:23,132 | INFO     | . stage-in = 0 s
[2025-07-25 22:41:56] 2025-07-26 02:41:23,132 | INFO     | . payload execution = 5118 s
[2025-07-25 22:41:56] 2025-07-26 02:41:23,133 | INFO     | . stage-out = 0 s
[2025-07-25 22:41:56] 2025-07-26 02:41:23,133 | INFO     | . log creation = 0 s
[2025-07-25 22:41:56] 2025-07-26 02:41:23,133 | INFO     | ..............................
[2025-07-25 22:41:56] 2025-07-26 02:41:23,229 | INFO     | 
[2025-07-25 22:41:56] 2025-07-26 02:41:23,230 | INFO     | job summary report
[2025-07-25 22:41:56] 2025-07-26 02:41:23,230 | INFO     | --------------------------------------------------
[2025-07-25 22:41:56] 2025-07-26 02:41:23,230 | INFO     | PanDA job id: 6745058704
[2025-07-25 22:41:56] 2025-07-26 02:41:23,230 | INFO     | task id: 45743349
[2025-07-25 22:41:56] 2025-07-26 02:41:23,230 | INFO     | errors: (none)
[2025-07-25 22:41:56] 2025-07-26 02:41:23,230 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-25 22:41:56] 2025-07-26 02:41:23,230 | INFO     | pilot state: finished 
[2025-07-25 22:41:56] 2025-07-26 02:41:23,230 | INFO     | transexitcode: 0
[2025-07-25 22:41:56] 2025-07-26 02:41:23,230 | INFO     | exeerrorcode: 0
[2025-07-25 22:41:56] 2025-07-26 02:41:23,231 | INFO     | exeerrordiag: 
[2025-07-25 22:41:56] 2025-07-26 02:41:23,231 | INFO     | exitcode: 0
[2025-07-25 22:41:56] 2025-07-26 02:41:23,231 | INFO     | exitmsg: OK
[2025-07-25 22:41:56] 2025-07-26 02:41:23,231 | INFO     | cpuconsumptiontime: 43694 s
[2025-07-25 22:41:56] 2025-07-26 02:41:23,231 | INFO     | nevents: 400
[2025-07-25 22:41:56] 2025-07-26 02:41:23,231 | INFO     | neventsw: 0
[2025-07-25 22:41:56] 2025-07-26 02:41:23,231 | INFO     | pid: 3111848
[2025-07-25 22:41:56] 2025-07-26 02:41:23,231 | INFO     | pgrp: 3111848
[2025-07-25 22:41:56] 2025-07-26 02:41:23,231 | INFO     | corecount: 12
[2025-07-25 22:41:56] 2025-07-26 02:41:23,231 | INFO     | event service: False
[2025-07-25 22:41:56] 2025-07-26 02:41:23,232 | INFO     | sizes: {0: 2397246, 1: 2397501, 7: 2397763, 12: 2397791, 5132: 2424088, 5134: 2433086, 5135: 2433270, 5141: 2433464}
[2025-07-25 22:41:56] 2025-07-26 02:41:23,232 | INFO     | --------------------------------------------------
[2025-07-25 22:41:56] 2025-07-26 02:41:23,232 | INFO     | 
[2025-07-25 22:41:56] 2025-07-26 02:41:23,232 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-07-25 22:41:56] 2025-07-26 02:41:23,257 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-25 22:41:56] 2025-07-26 02:41:23,258 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-25 22:41:56] 2025-07-26 02:41:23,258 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-25 22:41:56] 2025-07-26 02:41:23,258 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-25 22:41:56] 2025-07-26 02:41:23,258 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-25 22:41:56] 2025-07-26 02:41:23,258 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-25 22:41:56] 2025-07-26 02:41:23,258 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-25 22:41:56] 2025-07-26 02:41:23,258 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-25 22:41:56] 2025-07-26 02:41:23,258 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-25 22:41:56] 2025-07-26 02:41:23,258 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-25 22:41:56] 2025-07-26 02:41:23,259 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-25 22:41:56] 2025-07-26 02:41:23,259 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-25 22:41:56] 2025-07-26 02:41:23,259 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-25 22:41:56] 2025-07-26 02:41:23,259 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-25 22:41:56] 2025-07-26 02:41:23,259 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-25 22:41:56] 2025-07-26 02:41:23,259 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-25 22:41:56] 2025-07-26 02:41:23,259 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-25 22:41:56] 2025-07-26 02:41:23,259 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-25 22:41:56] 2025-07-26 02:41:23,259 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-25 22:41:56] 2025-07-26 02:41:23,259 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-25 22:41:56] 2025-07-26 02:41:23,260 | INFO     | job 6745058704 has completed (purged errors)
[2025-07-25 22:41:56] 2025-07-26 02:41:23,260 | INFO     | overall cleanup function is called
[2025-07-25 22:41:56] 2025-07-26 02:41:24,268 | INFO     | --- collectZombieJob: --- 10, [3111848]
[2025-07-25 22:41:56] 2025-07-26 02:41:24,268 | INFO     | zombie collector waiting for pid 3111848
[2025-07-25 22:41:56] 2025-07-26 02:41:24,268 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-25 22:41:56] 2025-07-26 02:41:24,269 | INFO     | collected zombie processes
[2025-07-25 22:41:56] 2025-07-26 02:41:24,269 | INFO     | will attempt to kill all subprocesses of pid=3111848
[2025-07-25 22:41:56] 2025-07-26 02:41:24,493 | INFO     | process IDs to be killed: [3111848] (in reverse order)
[2025-07-25 22:41:56] 2025-07-26 02:41:24,601 | WARNING  | found no corresponding commands to process id(s)
[2025-07-25 22:41:56] 2025-07-26 02:41:24,602 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-25 22:41:56] 2025-07-26 02:41:24,616 | INFO     | did not find any defunct processes belonging to 3111848
[2025-07-25 22:41:56] 2025-07-26 02:41:24,628 | INFO     | did not find any defunct processes belonging to 3111848
[2025-07-25 22:41:56] 2025-07-26 02:41:24,628 | INFO     | ready for new job
[2025-07-25 22:41:56] 2025-07-26 02:41:24,628 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-25 22:41:56] 2025-07-26 02:41:24,631 | INFO     | ***************************************
[2025-07-25 22:41:56] 2025-07-26 02:41:24,631 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-25 22:41:56] 2025-07-26 02:41:24,631 | INFO     | ***************************************
[2025-07-25 22:41:56] 2025-07-26 02:41:24,631 | INFO     | 
[2025-07-25 22:41:56] 2025-07-26 02:41:24,647 | INFO     | architecture information:
[2025-07-25 22:41:56] 2025-07-26 02:41:24,648 | INFO     | executing command: cat /etc/os-release
[2025-07-25 22:41:56] 2025-07-26 02:41:24,666 | INFO     | cat /etc/os-release:
[2025-07-25 22:41:56] NAME="CentOS Linux"
[2025-07-25 22:41:56] VERSION="7 (Core)"
[2025-07-25 22:41:56] ID="centos"
[2025-07-25 22:41:56] ID_LIKE="rhel fedora"
[2025-07-25 22:41:56] VERSION_ID="7"
[2025-07-25 22:41:56] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-25 22:41:56] ANSI_COLOR="0;31"
[2025-07-25 22:41:56] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-25 22:41:56] HOME_URL="https://www.centos.org/"
[2025-07-25 22:41:56] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-25 22:41:56] 
[2025-07-25 22:41:56] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-25 22:41:56] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-25 22:41:56] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-25 22:41:56] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-25 22:41:56] 
[2025-07-25 22:41:56] 2025-07-26 02:41:24,666 | INFO     | ***************************************
[2025-07-25 22:41:56] 2025-07-26 02:41:25,168 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-07-25 22:41:56] 2025-07-26 02:41:25,189 | INFO     | sufficient remaining disk space (76468453376 B)
[2025-07-25 22:41:56] 2025-07-26 02:41:25,190 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-25 22:41:56] 2025-07-26 02:41:25,190 | INFO     | current server update state: UPDATING_FINAL
[2025-07-25 22:41:56] 2025-07-26 02:41:25,190 | INFO     | update_server=False
[2025-07-25 22:41:56] 2025-07-26 02:41:25,190 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-25 22:41:56] 2025-07-26 02:41:25,191 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-25 22:41:56] 2025-07-26 02:41:25,445 | INFO     | all job control threads have been joined
[2025-07-25 22:41:56] 2025-07-26 02:41:25,524 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-25 22:41:56] 2025-07-26 02:41:25,525 | INFO     | aborting loop
[2025-07-25 22:41:56] 2025-07-26 02:41:25,634 | INFO     | all data control threads have been joined
[2025-07-25 22:41:56] 2025-07-26 02:41:26,182 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-25 22:41:56] 2025-07-26 02:41:26,195 | INFO     | [job] retrieve thread has finished
[2025-07-25 22:41:56] 2025-07-26 02:41:26,195 | INFO     | [job] queue monitor thread has finished
[2025-07-25 22:41:56] 2025-07-26 02:41:26,292 | INFO     | [job] validate thread has finished
[2025-07-25 22:41:56] 2025-07-26 02:41:26,451 | INFO     | [job] control thread has finished
[2025-07-25 22:41:56] 2025-07-26 02:41:26,453 | INFO     | all payload control threads have been joined
[2025-07-25 22:41:56] 2025-07-26 02:41:26,529 | INFO     | [job] job monitor thread has finished
[2025-07-25 22:41:56] 2025-07-26 02:41:26,639 | INFO     | [data] control thread has finished
[2025-07-25 22:41:56] 2025-07-26 02:41:26,687 | INFO     | [payload] validate_post thread has finished
[2025-07-25 22:41:56] 2025-07-26 02:41:26,691 | INFO     | [job] create_data_payload thread has finished
[2025-07-25 22:41:56] 2025-07-26 02:41:26,865 | INFO     | [payload] execute_payloads thread has finished
[2025-07-25 22:41:56] 2025-07-26 02:41:26,924 | INFO     | [payload] validate_pre thread has finished
[2025-07-25 22:41:56] 2025-07-26 02:41:27,074 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-25 22:41:56] 2025-07-26 02:41:27,459 | INFO     | [payload] control thread has finished
[2025-07-25 22:41:56] 2025-07-26 02:41:27,502 | INFO     | [payload] failed_post thread has finished
[2025-07-25 22:41:56] 2025-07-26 02:41:27,594 | INFO     | [data] copytool_in thread has finished
[2025-07-25 22:41:56] 2025-07-26 02:41:28,190 | INFO     | [data] copytool_out thread has finished
[2025-07-25 22:41:56] 2025-07-26 02:41:31,082 | INFO     | [data] queue_monitor thread has finished
[2025-07-25 22:41:56] 2025-07-26 02:41:36,006 | INFO     | job.realtimelogging is not enabled
[2025-07-25 22:41:56] 2025-07-26 02:41:37,011 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-25 22:41:56] 2025-07-26 02:41:38,918 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140129518966592)>', '<ExcThread(monitor, started 140129163253504)>']
[2025-07-25 22:41:56] 2025-07-26 02:41:43,944 | INFO     | all workflow threads have been joined
[2025-07-25 22:41:56] 2025-07-26 02:41:43,944 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-25 22:41:56] 2025-07-26 02:41:43,944 | INFO     | traces error code: 0
[2025-07-25 22:41:56] 2025-07-26 02:41:43,945 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-25 22:41:56] 2025-07-26 02:41:55,666 | INFO     | PID=3104762 has CPU usage=5.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-25 22:41:56] 2025-07-26 02:41:55,667 | INFO     | .. there are 15 such processes running
[2025-07-25 22:41:56] 2025-07-26 02:41:55,668 | INFO     | found 0 job(s) in 20 queues
[2025-07-25 22:41:56] 2025-07-26 02:41:55,668 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-25 22:41:56] 2025-07-26 02:41:55,668 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-25 22:41:56] 2025-07-26 02:41:55,668 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-25 22:41:56] 2025-07-26 02:41:55,669 | INFO     | [monitor] control thread has ended
[2025-07-25 22:41:56] 2025-07-26 02:41:55,837 [wrapper] ==== pilot stdout END ====
[2025-07-25 22:41:56] 2025-07-26 02:41:55,841 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-25 22:41:56] 2025-07-26 02:41:55,844 [wrapper] pilotpid: 3104762
[2025-07-25 22:41:56] 2025-07-26 02:41:55,849 [wrapper] Pilot exit status: 0
[2025-07-25 22:41:56] 2025-07-26 02:41:55,865 [wrapper] pandaids: 6745058704
[2025-07-25 22:41:56] 2025-07-26 02:41:55,925 [wrapper] cleanup supervisor_pilot 3264988 3104763
[2025-07-25 22:41:56] 2025-07-26 02:41:55,929 [wrapper] Test setup, not cleaning
[2025-07-25 22:41:56] 2025-07-26 02:41:55,934 [wrapper] apfmon messages muted
[2025-07-25 22:41:56] 2025-07-26 02:41:55,939 [wrapper] ==== wrapper stdout END ====
[2025-07-25 22:41:56] 2025-07-26 02:41:55,947 [wrapper] ==== wrapper stderr END ====
[2025-07-25 22:41:56]  *** Error codes and diagnostics ***
[2025-07-25 22:41:56]     "exeErrorCode": 0,
[2025-07-25 22:41:56]     "exeErrorDiag": "",
[2025-07-25 22:41:56]     "pilotErrorCode": 0,
[2025-07-25 22:41:56]     "pilotErrorDiag": "",
[2025-07-25 22:41:56]  *** Listing of results directory ***
[2025-07-25 22:41:56] total 341136
[2025-07-25 22:41:56] -rw-r--r--. 1 boincer umatlas      5112 Jul 25 12:58 queuedata.json
[2025-07-25 22:41:56] -rwx------. 1 boincer umatlas     36292 Jul 25 13:00 runpilot2-wrapper.sh
[2025-07-25 22:41:56] -rw-r--r--. 1 boincer umatlas    530466 Jul 25 13:00 pilot3.tar.gz
[2025-07-25 22:41:56] -rw-r--r--. 1 boincer umatlas       100 Jul 25 21:15 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-25 22:41:56] -rwxr-xr-x. 1 boincer umatlas      7986 Jul 25 21:15 run_atlas
[2025-07-25 22:41:56] -rw-r--r--. 1 boincer umatlas       105 Jul 25 21:15 job.xml
[2025-07-25 22:41:56] -rw-r--r--. 2 boincer umatlas 140898728 Jul 25 21:15 EVNT.45743347._001368.pool.root.1
[2025-07-25 22:41:56] -rw-r--r--. 2 boincer umatlas     15095 Jul 25 21:15 start_atlas.sh
[2025-07-25 22:41:56] drwxrwx--x. 2 boincer umatlas      4096 Jul 25 21:15 shared
[2025-07-25 22:41:56] -rw-r--r--. 2 boincer umatlas    542884 Jul 25 21:15 input.tar.gz
[2025-07-25 22:41:56] -rw-r--r--. 1 boincer umatlas         0 Jul 25 21:15 boinc_lockfile
[2025-07-25 22:41:56] -rw-r--r--. 1 boincer umatlas      2562 Jul 25 21:15 pandaJob.out
[2025-07-25 22:41:56] -rw-------. 1 boincer umatlas    979993 Jul 25 21:15 agis_schedconf.cvmfs.json
[2025-07-25 22:41:56] -rw-------. 1 boincer umatlas   1593052 Jul 25 21:15 agis_ddmendpoints.agis.ALL.json
[2025-07-25 22:41:56] drwx------. 4 boincer umatlas      4096 Jul 25 21:15 pilot3
[2025-07-25 22:41:56] -rw-r--r--. 1 boincer umatlas      6843 Jul 25 22:36 init_data.xml
[2025-07-25 22:41:56] -rw-------. 1 boincer umatlas 202812121 Jul 25 22:40 HITS.45743349._024127.pool.root.1
[2025-07-25 22:41:56] -rw-r--r--. 1 boincer umatlas       530 Jul 25 22:40 boinc_task_state.xml
[2025-07-25 22:41:56] -rw-------. 1 boincer umatlas      1037 Jul 25 22:41 memory_monitor_summary.json
[2025-07-25 22:41:56] -rw-------. 1 boincer umatlas    374477 Jul 25 22:41 log.45743349._024127.job.log.tgz.1
[2025-07-25 22:41:56] -rw-------. 1 boincer umatlas      7833 Jul 25 22:41 heartbeat.json
[2025-07-25 22:41:56] -rw-r--r--. 1 boincer umatlas        27 Jul 25 22:41 wrapper_checkpoint.txt
[2025-07-25 22:41:56] -rw-r--r--. 1 boincer umatlas      8192 Jul 25 22:41 boinc_mmap_file
[2025-07-25 22:41:56] -rw-------. 1 boincer umatlas       823 Jul 25 22:41 pilotlog.txt
[2025-07-25 22:41:56] -rw-------. 1 boincer umatlas        95 Jul 25 22:41 pilot_heartbeat.json
[2025-07-25 22:41:56] -rw-------. 1 boincer umatlas    492229 Jul 25 22:41 log.45743349._024127.job.log.1
[2025-07-25 22:41:56] -rw-------. 1 boincer umatlas       357 Jul 25 22:41 output.list
[2025-07-25 22:41:56] -rw-r--r--. 1 boincer umatlas       620 Jul 25 22:41 runtime_log
[2025-07-25 22:41:56] -rw-------. 1 boincer umatlas    890880 Jul 25 22:41 result.tar.gz
[2025-07-25 22:41:56] -rw-r--r--. 1 boincer umatlas      8667 Jul 25 22:41 runtime_log.err
[2025-07-25 22:41:56] -rw-------. 1 boincer umatlas       654 Jul 25 22:41 p7XNDm1xaz7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmD1PLDm73bJan.diag
[2025-07-25 22:41:56] -rw-r--r--. 1 boincer umatlas     21859 Jul 25 22:41 stderr.txt
[2025-07-25 22:41:56] HITS file was successfully produced:
[2025-07-25 22:41:56] -rw-------. 1 boincer umatlas 202812121 Jul 25 22:40 shared/HITS.pool.root.1
[2025-07-25 22:41:56]  *** Contents of shared directory: ***
[2025-07-25 22:41:56] total 337080
[2025-07-25 22:41:56] -rw-r--r--. 2 boincer umatlas 140898728 Jul 25 21:15 ATLAS.root_0
[2025-07-25 22:41:56] -rw-r--r--. 2 boincer umatlas     15095 Jul 25 21:15 start_atlas.sh
[2025-07-25 22:41:56] -rw-r--r--. 2 boincer umatlas    542884 Jul 25 21:15 input.tar.gz
[2025-07-25 22:41:56] -rw-------. 1 boincer umatlas 202812121 Jul 25 22:40 HITS.pool.root.1
[2025-07-25 22:41:56] -rw-------. 1 boincer umatlas    890880 Jul 25 22:41 result.tar.gz
22:41:57 (3101070): run_atlas exited; CPU time 43736.361619
22:41:57 (3101070): called boinc_finish(0)

</stderr_txt>
]]>

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