Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
18:35:25 (3491): wrapper (7.7.26015): starting
18:35:25 (3491): wrapper: running run_atlas (--nthreads 12)
[2025-07-25 18:35:25] Arguments: --nthreads 12
[2025-07-25 18:35:25] Threads: 12
[2025-07-25 18:35:25] Checking for CVMFS
[2025-07-25 18:35:25] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-25 18:35:26] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-25 18:35:26] Running cvmfs_config stat atlas.cern.ch
[2025-07-25 18:35:26] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-25 18:35:26] 2.11.2.0 3035 109683 98336 148756 2 59 14582378 20275200 1 130560 0 35792045 99.970 10058171 11062 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-07-25 18:35:26] CVMFS is ok
[2025-07-25 18:35:26] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-25 18:35:26] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-25 18:35:26] Further information can be found at the LHC@home message board.
[2025-07-25 18:35:26] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-25 18:35:26] Checking for apptainer binary...
[2025-07-25 18:35:26] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-25 18:35:26] Running /usr/bin/apptainer --version
[2025-07-25 18:35:26] apptainer version 1.3.2-1.el7
[2025-07-25 18:35:26] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-25 18:35:27] c-205-31.aglt2.org
[2025-07-25 18:35:27] apptainer works
[2025-07-25 18:35:27] Set ATHENA_PROC_NUMBER=12
[2025-07-25 18:35:27] Set ATHENA_CORE_NUMBER=12
[2025-07-25 18:35:27] Starting ATLAS job with PandaID=6745058093
[2025-07-25 18:35:27] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-25 19:58:12]  *** The last 200 lines of the pilot log: ***
[2025-07-25 19:58:12]  lfn=log.45743349._023599.job.log.tgz.1
[2025-07-25 19:58:12]  mtime=0
[2025-07-25 19:58:12]  protocol_id=None
[2025-07-25 19:58:12]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-07-25 19:58:12]  replicas=None
[2025-07-25 19:58:12]  scope=mc23_13p6TeV
[2025-07-25 19:58:12]  status=None
[2025-07-25 19:58:12]  status_code=0
[2025-07-25 19:58:12]  storage_token=
[2025-07-25 19:58:12]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6745058093/log.45743349._023599.job.log.tgz.1
[2025-07-25 19:58:12]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/36/36/log.45743349._023599.job.log.tgz.1
[2025-07-25 19:58:12]  workdir=None
[2025-07-25 19:58:12] ]
[2025-07-25 19:58:12] 2025-07-25 23:57:45,985 | INFO     | transferring file log.45743349._023599.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6745058093/log.45743349._023599.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-07-25 19:58:12] 2025-07-25 23:57:45,985 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6745058093/log.45743349._023599.job.log.tgz.1 /tmp/boinchome/slots/0/log.45743349._023599.job
[2025-07-25 19:58:12] 2025-07-25 23:57:46,008 | INFO     | adding to output.list: log.45743349._023599.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/36/36/log.45743349._023599.job.log.tg
[2025-07-25 19:58:12] 2025-07-25 23:57:46,009 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-25 19:58:12] 2025-07-25 23:57:46,009 | INFO     | summary of transferred files:
[2025-07-25 19:58:12] 2025-07-25 23:57:46,009 | INFO     |  -- lfn=log.45743349._023599.job.log.tgz.1, status_code=0, status=transferred
[2025-07-25 19:58:12] 2025-07-25 23:57:46,010 | INFO     | stage-out finished correctly
[2025-07-25 19:58:12] 2025-07-25 23:57:46,372 | INFO     | PID=7089 has CPU usage=5.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-07-25 19:58:12] 2025-07-25 23:57:47,798 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-25 19:58:12] 2025-07-25 23:57:48,786 | WARNING  | process 13564 can no longer be monitored (due to stat problems) - aborting
[2025-07-25 19:58:12] 2025-07-25 23:57:48,786 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6745058093/memory_monitor_summary.json (trf name=prmon)
[2025-07-25 19:58:12] 2025-07-25 23:57:48,853 | INFO     | job 6745058093 has state=finished
[2025-07-25 19:58:12] 2025-07-25 23:57:48,853 | INFO     | preparing for final server update for job 6745058093 in state='finished'
[2025-07-25 19:58:12] 2025-07-25 23:57:48,854 | INFO     | this job has now completed (state=finished)
[2025-07-25 19:58:12] 2025-07-25 23:57:48,854 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-25 19:58:12] 2025-07-25 23:57:48,855 | INFO     | log transfer has been attempted: DONE
[2025-07-25 19:58:12] 2025-07-25 23:57:48,855 | INFO     | job 6745058093 has finished - writing final server update
[2025-07-25 19:58:12] 2025-07-25 23:57:48,855 | INFO     | total number of processed events: 400 (read)
[2025-07-25 19:58:12] 2025-07-25 23:57:48,856 | INFO     | executing command: lscpu
[2025-07-25 19:58:12] 2025-07-25 23:57:48,882 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-25 19:58:12] 2025-07-25 23:57:48,886 | INFO     | number of running child processes to parent process 13564: 1
[2025-07-25 19:58:12] 2025-07-25 23:57:48,886 | INFO     | maximum number of monitored processes: 6
[2025-07-25 19:58:12] 2025-07-25 23:57:51,389 | INFO     | monitor loop #368: job 0:6745058093 is in state 'finished'
[2025-07-25 19:58:12] 2025-07-25 23:57:51,390 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-25 19:58:12] 2025-07-25 23:57:53,553 | INFO     | CPU arch script returned: x86-64-v2
[2025-07-25 19:58:12] 2025-07-25 23:57:53,556 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1706.8333333333333
[2025-07-25 19:58:12] 2025-07-25 23:57:53,558 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6745058093/memory_monitor_summary.json (trf name=prmon)
[2025-07-25 19:58:12] 2025-07-25 23:57:53,558 | INFO     | extracted standard info from prmon json
[2025-07-25 19:58:12] 2025-07-25 23:57:53,558 | INFO     | extracted standard memory fields from prmon json
[2025-07-25 19:58:12] 2025-07-25 23:57:53,558 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-25 19:58:12] 2025-07-25 23:57:53,559 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-25 19:58:12] 2025-07-25 23:57:53,559 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-25 19:58:12] 2025-07-25 23:57:53,560 | INFO     | fitting pss+swap vs Time
[2025-07-25 19:58:12] 2025-07-25 23:57:53,561 | INFO     | sum of square deviations: 125630262.5
[2025-07-25 19:58:12] 2025-07-25 23:57:53,561 | INFO     | sum of deviations: -9930958417.000002
[2025-07-25 19:58:12] 2025-07-25 23:57:53,561 | INFO     | mean x: 1753485502.5
[2025-07-25 19:58:12] 2025-07-25 23:57:53,561 | INFO     | mean y: 2813525.189189189
[2025-07-25 19:58:12] 2025-07-25 23:57:53,561 | INFO     | -- intersect: 138614253663.9842
[2025-07-25 19:58:12] 2025-07-25 23:57:53,562 | INFO     | intersect: 138614253663.9842
[2025-07-25 19:58:12] 2025-07-25 23:57:53,562 | INFO     | chi2: 0.0987580145411953
[2025-07-25 19:58:12] 2025-07-25 23:57:53,562 | INFO     | -- intersect: 138614253663.9842
[2025-07-25 19:58:12] 2025-07-25 23:57:53,562 | INFO     | current memory leak: -79.05 B/s (using 74 data points, chi2=0.10)
[2025-07-25 19:58:12] 2025-07-25 23:57:53,562 | INFO     | could have reported an average CPU frequency of 2060 MHz (6 samples)
[2025-07-25 19:58:12] 2025-07-25 23:57:53,562 | INFO     | ..............................
[2025-07-25 19:58:12] 2025-07-25 23:57:53,563 | INFO     | . Timing measurements:
[2025-07-25 19:58:12] 2025-07-25 23:57:53,563 | INFO     | . get job = 0 s
[2025-07-25 19:58:12] 2025-07-25 23:57:53,563 | INFO     | . initial setup = 2 s
[2025-07-25 19:58:12] 2025-07-25 23:57:53,563 | INFO     | . payload setup = 9 s
[2025-07-25 19:58:12] 2025-07-25 23:57:53,563 | INFO     | . stage-in = 0 s
[2025-07-25 19:58:12] 2025-07-25 23:57:53,563 | INFO     | . payload execution = 4893 s
[2025-07-25 19:58:12] 2025-07-25 23:57:53,563 | INFO     | . stage-out = 0 s
[2025-07-25 19:58:12] 2025-07-25 23:57:53,563 | INFO     | . log creation = 0 s
[2025-07-25 19:58:12] 2025-07-25 23:57:53,563 | INFO     | ..............................
[2025-07-25 19:58:12] 2025-07-25 23:57:53,645 | INFO     | 
[2025-07-25 19:58:12] 2025-07-25 23:57:53,645 | INFO     | job summary report
[2025-07-25 19:58:12] 2025-07-25 23:57:53,646 | INFO     | --------------------------------------------------
[2025-07-25 19:58:12] 2025-07-25 23:57:53,646 | INFO     | PanDA job id: 6745058093
[2025-07-25 19:58:12] 2025-07-25 23:57:53,646 | INFO     | task id: 45743349
[2025-07-25 19:58:12] 2025-07-25 23:57:53,646 | INFO     | errors: (none)
[2025-07-25 19:58:12] 2025-07-25 23:57:53,646 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-25 19:58:12] 2025-07-25 23:57:53,646 | INFO     | pilot state: finished 
[2025-07-25 19:58:12] 2025-07-25 23:57:53,647 | INFO     | transexitcode: 0
[2025-07-25 19:58:12] 2025-07-25 23:57:53,647 | INFO     | exeerrorcode: 0
[2025-07-25 19:58:12] 2025-07-25 23:57:53,647 | INFO     | exeerrordiag: 
[2025-07-25 19:58:12] 2025-07-25 23:57:53,647 | INFO     | exitcode: 0
[2025-07-25 19:58:12] 2025-07-25 23:57:53,647 | INFO     | exitmsg: OK
[2025-07-25 19:58:12] 2025-07-25 23:57:53,647 | INFO     | cpuconsumptiontime: 53099 s
[2025-07-25 19:58:12] 2025-07-25 23:57:53,648 | INFO     | nevents: 400
[2025-07-25 19:58:12] 2025-07-25 23:57:53,648 | INFO     | neventsw: 0
[2025-07-25 19:58:12] 2025-07-25 23:57:53,648 | INFO     | pid: 13564
[2025-07-25 19:58:12] 2025-07-25 23:57:53,648 | INFO     | pgrp: 13564
[2025-07-25 19:58:12] 2025-07-25 23:57:53,648 | INFO     | corecount: 12
[2025-07-25 19:58:12] 2025-07-25 23:57:53,648 | INFO     | event service: False
[2025-07-25 19:58:12] 2025-07-25 23:57:53,649 | INFO     | sizes: {0: 2397302, 1: 2397501, 5: 2397763, 11: 2397819, 4907: 2424064, 4909: 2433062, 4911: 2433246, 4917: 2433440}
[2025-07-25 19:58:12] 2025-07-25 23:57:53,649 | INFO     | --------------------------------------------------
[2025-07-25 19:58:12] 2025-07-25 23:57:53,649 | INFO     | 
[2025-07-25 19:58:12] 2025-07-25 23:57:53,649 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-07-25 19:58:12] 2025-07-25 23:57:53,674 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-25 19:58:12] 2025-07-25 23:57:53,674 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-25 19:58:12] 2025-07-25 23:57:53,674 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-25 19:58:12] 2025-07-25 23:57:53,674 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-25 19:58:12] 2025-07-25 23:57:53,675 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-25 19:58:12] 2025-07-25 23:57:53,675 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-25 19:58:12] 2025-07-25 23:57:53,675 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-25 19:58:12] 2025-07-25 23:57:53,675 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-25 19:58:12] 2025-07-25 23:57:53,675 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-25 19:58:12] 2025-07-25 23:57:53,675 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-25 19:58:12] 2025-07-25 23:57:53,676 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-25 19:58:12] 2025-07-25 23:57:53,676 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-25 19:58:12] 2025-07-25 23:57:53,676 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-25 19:58:12] 2025-07-25 23:57:53,676 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-25 19:58:12] 2025-07-25 23:57:53,676 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-25 19:58:12] 2025-07-25 23:57:53,676 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-25 19:58:12] 2025-07-25 23:57:53,677 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-25 19:58:12] 2025-07-25 23:57:53,677 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-25 19:58:12] 2025-07-25 23:57:53,677 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-25 19:58:12] 2025-07-25 23:57:53,677 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-25 19:58:12] 2025-07-25 23:57:53,677 | INFO     | job 6745058093 has completed (purged errors)
[2025-07-25 19:58:12] 2025-07-25 23:57:53,678 | INFO     | overall cleanup function is called
[2025-07-25 19:58:12] 2025-07-25 23:57:54,686 | INFO     | --- collectZombieJob: --- 10, [13564]
[2025-07-25 19:58:12] 2025-07-25 23:57:54,686 | INFO     | zombie collector waiting for pid 13564
[2025-07-25 19:58:12] 2025-07-25 23:57:54,686 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-25 19:58:12] 2025-07-25 23:57:54,686 | INFO     | collected zombie processes
[2025-07-25 19:58:12] 2025-07-25 23:57:54,687 | INFO     | will attempt to kill all subprocesses of pid=13564
[2025-07-25 19:58:12] 2025-07-25 23:57:54,776 | INFO     | process IDs to be killed: [13564] (in reverse order)
[2025-07-25 19:58:12] 2025-07-25 23:57:54,830 | WARNING  | found no corresponding commands to process id(s)
[2025-07-25 19:58:12] 2025-07-25 23:57:54,830 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-25 19:58:12] 2025-07-25 23:57:54,834 | INFO     | did not find any defunct processes belonging to 13564
[2025-07-25 19:58:12] 2025-07-25 23:57:54,836 | INFO     | did not find any defunct processes belonging to 13564
[2025-07-25 19:58:12] 2025-07-25 23:57:54,836 | INFO     | ready for new job
[2025-07-25 19:58:12] 2025-07-25 23:57:54,837 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-25 19:58:12] 2025-07-25 23:57:54,838 | INFO     | ***************************************
[2025-07-25 19:58:12] 2025-07-25 23:57:54,838 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-25 19:58:12] 2025-07-25 23:57:54,838 | INFO     | ***************************************
[2025-07-25 19:58:12] 2025-07-25 23:57:54,838 | INFO     | 
[2025-07-25 19:58:12] 2025-07-25 23:57:54,838 | INFO     | architecture information:
[2025-07-25 19:58:12] 2025-07-25 23:57:54,839 | INFO     | executing command: cat /etc/os-release
[2025-07-25 19:58:12] 2025-07-25 23:57:54,854 | INFO     | cat /etc/os-release:
[2025-07-25 19:58:12] NAME="CentOS Linux"
[2025-07-25 19:58:12] VERSION="7 (Core)"
[2025-07-25 19:58:12] ID="centos"
[2025-07-25 19:58:12] ID_LIKE="rhel fedora"
[2025-07-25 19:58:12] VERSION_ID="7"
[2025-07-25 19:58:12] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-25 19:58:12] ANSI_COLOR="0;31"
[2025-07-25 19:58:12] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-25 19:58:12] HOME_URL="https://www.centos.org/"
[2025-07-25 19:58:12] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-25 19:58:12] 
[2025-07-25 19:58:12] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-25 19:58:12] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-25 19:58:12] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-25 19:58:12] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-25 19:58:12] 
[2025-07-25 19:58:12] 2025-07-25 23:57:54,854 | INFO     | ***************************************
[2025-07-25 19:58:12] 2025-07-25 23:57:55,357 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-07-25 19:58:12] 2025-07-25 23:57:55,374 | INFO     | sufficient remaining disk space (29517414400 B)
[2025-07-25 19:58:12] 2025-07-25 23:57:55,374 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-25 19:58:12] 2025-07-25 23:57:55,374 | INFO     | current server update state: UPDATING_FINAL
[2025-07-25 19:58:12] 2025-07-25 23:57:55,374 | INFO     | update_server=False
[2025-07-25 19:58:12] 2025-07-25 23:57:55,374 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-25 19:58:12] 2025-07-25 23:57:55,375 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-25 19:58:12] 2025-07-25 23:57:55,375 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-25 19:58:12] 2025-07-25 23:57:55,375 | INFO     | aborting loop
[2025-07-25 19:58:12] 2025-07-25 23:57:55,375 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-07-25 19:58:12] 2025-07-25 23:57:55,376 | INFO     | found 0 job(s) in 20 queues
[2025-07-25 19:58:12] 2025-07-25 23:57:55,376 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-25 19:58:12] 2025-07-25 23:57:55,376 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-25 19:58:12] 2025-07-25 23:57:55,844 | INFO     | all job control threads have been joined
[2025-07-25 19:58:12] 2025-07-25 23:57:55,901 | INFO     | all payload control threads have been joined
[2025-07-25 19:58:12] 2025-07-25 23:57:56,380 | INFO     | [job] retrieve thread has finished
[2025-07-25 19:58:12] 2025-07-25 23:57:56,381 | INFO     | [job] queue monitor thread has finished
[2025-07-25 19:58:12] 2025-07-25 23:57:56,381 | INFO     | [job] job monitor thread has finished
[2025-07-25 19:58:12] 2025-07-25 23:57:56,395 | INFO     | all data control threads have been joined
[2025-07-25 19:58:12] 2025-07-25 23:57:56,415 | INFO     | [payload] validate_post thread has finished
[2025-07-25 19:58:12] 2025-07-25 23:57:56,582 | INFO     | [payload] execute_payloads thread has finished
[2025-07-25 19:58:12] 2025-07-25 23:57:56,602 | INFO     | [data] copytool_in thread has finished
[2025-07-25 19:58:12] 2025-07-25 23:57:56,613 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-25 19:58:12] 2025-07-25 23:57:56,850 | INFO     | [job] control thread has finished
[2025-07-25 19:58:12] 2025-07-25 23:57:56,906 | INFO     | [payload] control thread has finished
[2025-07-25 19:58:12] 2025-07-25 23:57:57,370 | INFO     | [job] validate thread has finished
[2025-07-25 19:58:12] 2025-07-25 23:57:57,400 | INFO     | [data] control thread has finished
[2025-07-25 19:58:12] 2025-07-25 23:57:57,423 | INFO     | [payload] failed_post thread has finished
[2025-07-25 19:58:12] 2025-07-25 23:57:57,561 | INFO     | [job] create_data_payload thread has finished
[2025-07-25 19:58:12] 2025-07-25 23:57:57,703 | INFO     | [payload] validate_pre thread has finished
[2025-07-25 19:58:12] 2025-07-25 23:57:58,389 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-25 19:58:12] 2025-07-25 23:57:58,615 | INFO     | [data] copytool_out thread has finished
[2025-07-25 19:58:12] 2025-07-25 23:58:02,395 | INFO     | [data] queue_monitor thread has finished
[2025-07-25 19:58:12] 2025-07-25 23:58:06,273 | INFO     | job.realtimelogging is not enabled
[2025-07-25 19:58:12] 2025-07-25 23:58:07,278 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-25 19:58:12] 2025-07-25 23:58:07,326 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139741710640960)>', '<ExcThread(monitor, started 139741005584128)>']
[2025-07-25 19:58:12] 2025-07-25 23:58:07,438 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-25 19:58:12] 2025-07-25 23:58:07,438 | INFO     | [monitor] control thread has ended
[2025-07-25 19:58:12] 2025-07-25 23:58:12,352 | INFO     | all workflow threads have been joined
[2025-07-25 19:58:12] 2025-07-25 23:58:12,352 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-25 19:58:12] 2025-07-25 23:58:12,352 | INFO     | traces error code: 0
[2025-07-25 19:58:12] 2025-07-25 23:58:12,353 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-25 19:58:12] 2025-07-25 23:58:12,432 [wrapper] ==== pilot stdout END ====
[2025-07-25 19:58:12] 2025-07-25 23:58:12,435 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-25 19:58:12] 2025-07-25 23:58:12,439 [wrapper] pilotpid: 7089
[2025-07-25 19:58:12] 2025-07-25 23:58:12,443 [wrapper] Pilot exit status: 0
[2025-07-25 19:58:12] 2025-07-25 23:58:12,470 [wrapper] pandaids: 6745058093
[2025-07-25 19:58:12] 2025-07-25 23:58:12,508 [wrapper] cleanup supervisor_pilot 26936 7090
[2025-07-25 19:58:12] 2025-07-25 23:58:12,512 [wrapper] Test setup, not cleaning
[2025-07-25 19:58:12] 2025-07-25 23:58:12,517 [wrapper] apfmon messages muted
[2025-07-25 19:58:12] 2025-07-25 23:58:12,520 [wrapper] ==== wrapper stdout END ====
[2025-07-25 19:58:12] 2025-07-25 23:58:12,524 [wrapper] ==== wrapper stderr END ====
[2025-07-25 19:58:12]  *** Error codes and diagnostics ***
[2025-07-25 19:58:12]     "exeErrorCode": 0,
[2025-07-25 19:58:12]     "exeErrorDiag": "",
[2025-07-25 19:58:12]     "pilotErrorCode": 0,
[2025-07-25 19:58:12]     "pilotErrorDiag": "",
[2025-07-25 19:58:12]  *** Listing of results directory ***
[2025-07-25 19:58:12] total 350540
[2025-07-25 19:58:12] -rw-r--r-- 1 boincer umatlas    530466 Jul 25 11:55 pilot3.tar.gz
[2025-07-25 19:58:12] -rw-r--r-- 1 boincer umatlas      5112 Jul 25 12:14 queuedata.json
[2025-07-25 19:58:12] -rwx------ 1 boincer umatlas     36292 Jul 25 12:15 runpilot2-wrapper.sh
[2025-07-25 19:58:12] -rw-r--r-- 1 boincer umatlas       100 Jul 25 18:35 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-25 19:58:12] -rwxr-xr-x 1 boincer umatlas      7986 Jul 25 18:35 run_atlas
[2025-07-25 19:58:12] -rw-r--r-- 1 boincer umatlas       105 Jul 25 18:35 job.xml
[2025-07-25 19:58:12] -rw-r--r-- 2 boincer umatlas 146215894 Jul 25 18:35 EVNT.45743347._001334.pool.root.1
[2025-07-25 19:58:12] -rw-r--r-- 2 boincer umatlas    542894 Jul 25 18:35 input.tar.gz
[2025-07-25 19:58:12] -rw-r--r-- 2 boincer umatlas     15095 Jul 25 18:35 start_atlas.sh
[2025-07-25 19:58:12] drwxrwx--x 2 boincer umatlas      4096 Jul 25 18:35 shared
[2025-07-25 19:58:12] -rw-r--r-- 1 boincer umatlas         0 Jul 25 18:35 boinc_lockfile
[2025-07-25 19:58:12] -rw-r--r-- 1 boincer umatlas      2562 Jul 25 18:35 pandaJob.out
[2025-07-25 19:58:12] -rw------- 1 boincer umatlas    980001 Jul 25 18:35 agis_schedconf.cvmfs.json
[2025-07-25 19:58:12] -rw------- 1 boincer umatlas   1593052 Jul 25 18:35 agis_ddmendpoints.agis.ALL.json
[2025-07-25 19:58:12] drwx------ 4 boincer umatlas      4096 Jul 25 18:35 pilot3
[2025-07-25 19:58:12] -rw-r--r-- 1 boincer umatlas      5868 Jul 25 19:56 init_data.xml
[2025-07-25 19:58:12] -rw------- 1 boincer umatlas 207207415 Jul 25 19:57 HITS.45743349._023599.pool.root.1
[2025-07-25 19:58:12] -rw-r--r-- 1 boincer umatlas       529 Jul 25 19:57 boinc_task_state.xml
[2025-07-25 19:58:12] -rw------- 1 boincer umatlas      1050 Jul 25 19:57 memory_monitor_summary.json
[2025-07-25 19:58:12] -rw------- 1 boincer umatlas        95 Jul 25 19:57 pilot_heartbeat.json
[2025-07-25 19:58:12] -rw------- 1 boincer umatlas    355949 Jul 25 19:57 log.45743349._023599.job.log.tgz.1
[2025-07-25 19:58:12] -rw------- 1 boincer umatlas      7853 Jul 25 19:57 heartbeat.json
[2025-07-25 19:58:12] -rw-r--r-- 1 boincer umatlas        27 Jul 25 19:57 wrapper_checkpoint.txt
[2025-07-25 19:58:12] -rw-r--r-- 1 boincer umatlas      8192 Jul 25 19:57 boinc_mmap_file
[2025-07-25 19:58:12] -rw------- 1 boincer umatlas      4552 Jul 25 19:58 pilotlog.txt
[2025-07-25 19:58:12] -rw------- 1 boincer umatlas    469649 Jul 25 19:58 log.45743349._023599.job.log.1
[2025-07-25 19:58:12] -rw------- 1 boincer umatlas       357 Jul 25 19:58 output.list
[2025-07-25 19:58:12] -rw-r--r-- 1 boincer umatlas       620 Jul 25 19:58 runtime_log
[2025-07-25 19:58:12] -rw------- 1 boincer umatlas    849920 Jul 25 19:58 result.tar.gz
[2025-07-25 19:58:12] -rw-r--r-- 1 boincer umatlas      8662 Jul 25 19:58 runtime_log.err
[2025-07-25 19:58:12] -rw------- 1 boincer umatlas       659 Jul 25 19:58 fTOKDm7Faz7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmAwPLDmhixFKm.diag
[2025-07-25 19:58:12] -rw-r--r-- 1 boincer umatlas     21682 Jul 25 19:58 stderr.txt
[2025-07-25 19:58:12] HITS file was successfully produced:
[2025-07-25 19:58:12] -rw------- 1 boincer umatlas 207207415 Jul 25 19:57 shared/HITS.pool.root.1
[2025-07-25 19:58:12]  *** Contents of shared directory: ***
[2025-07-25 19:58:12] total 346524
[2025-07-25 19:58:12] -rw-r--r-- 2 boincer umatlas 146215894 Jul 25 18:35 ATLAS.root_0
[2025-07-25 19:58:12] -rw-r--r-- 2 boincer umatlas    542894 Jul 25 18:35 input.tar.gz
[2025-07-25 19:58:12] -rw-r--r-- 2 boincer umatlas     15095 Jul 25 18:35 start_atlas.sh
[2025-07-25 19:58:12] -rw------- 1 boincer umatlas 207207415 Jul 25 19:57 HITS.pool.root.1
[2025-07-25 19:58:12] -rw------- 1 boincer umatlas    849920 Jul 25 19:58 result.tar.gz
19:58:13 (3491): run_atlas exited; CPU time 53076.649208
19:58:13 (3491): called boinc_finish(0)

</stderr_txt>
]]>

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