Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
18:29:05 (606031): wrapper (7.7.26015): starting
18:29:05 (606031): wrapper: running run_atlas (--nthreads 8)
[2025-07-25 18:29:05] Arguments: --nthreads 8
[2025-07-25 18:29:05] Threads: 8
[2025-07-25 18:29:05] Checking for CVMFS
[2025-07-25 18:29:05] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-25 18:29:06] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-25 18:29:06] Running cvmfs_config stat atlas.cern.ch
[2025-07-25 18:29:06] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-25 18:29:06] 2.12.6.0 557484 16101 273076 148756 2 516 22095607 32935937 25163 16776704 0 74004658 99.529 120056201 21461 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-07-25 18:29:06] CVMFS is ok
[2025-07-25 18:29:06] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-25 18:29:06] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-25 18:29:06] Further information can be found at the LHC@home message board.
[2025-07-25 18:29:06] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-25 18:29:06] Checking for apptainer binary...
[2025-07-25 18:29:06] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-25 18:29:06] Running /usr/bin/apptainer --version
[2025-07-25 18:29:06] apptainer version 1.4.1-1.el9
[2025-07-25 18:29:06] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-25 18:29:07] c7-3-34.aglt2.org
[2025-07-25 18:29:07] apptainer works
[2025-07-25 18:29:07] Set ATHENA_PROC_NUMBER=8
[2025-07-25 18:29:07] Set ATHENA_CORE_NUMBER=8
[2025-07-25 18:29:07] Starting ATLAS job with PandaID=6745058437
[2025-07-25 18:29:07] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-25 21:05:07]  *** The last 200 lines of the pilot log: ***
[2025-07-25 21:05:07] 2025-07-26 01:04:33,596 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-25 21:05:07] 2025-07-26 01:04:33,596 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-25 21:05:07] 2025-07-26 01:04:33,598 | INFO     | fitting pss+swap vs Time
[2025-07-25 21:05:07] 2025-07-26 01:04:33,598 | INFO     | sum of square deviations: 1088972865.0526273
[2025-07-25 21:05:07] 2025-07-26 01:04:33,599 | INFO     | sum of deviations: 1898644202.7368317
[2025-07-25 21:05:07] 2025-07-26 01:04:33,599 | INFO     | mean x: 1753487240.5789473
[2025-07-25 21:05:07] 2025-07-26 01:04:33,599 | INFO     | mean y: 2167515.9802631577
[2025-07-25 21:05:07] 2025-07-26 01:04:33,599 | INFO     | -- intersect: -3055069712.5500617
[2025-07-25 21:05:07] 2025-07-26 01:04:33,599 | INFO     | intersect: -3055069712.5500617
[2025-07-25 21:05:07] 2025-07-26 01:04:33,599 | INFO     | chi2: 2.723648711852483
[2025-07-25 21:05:07] 2025-07-26 01:04:33,599 | INFO     | sum of square deviations: 984983966.4489775
[2025-07-25 21:05:07] 2025-07-26 01:04:33,600 | INFO     | sum of deviations: 10737944173.204086
[2025-07-25 21:05:07] 2025-07-26 01:04:33,600 | INFO     | mean x: 1753487088.0612245
[2025-07-25 21:05:07] 2025-07-26 01:04:33,600 | INFO     | mean y: 2180140.088435374
[2025-07-25 21:05:07] 2025-07-26 01:04:33,600 | INFO     | -- intersect: -19113711185.44916
[2025-07-25 21:05:07] 2025-07-26 01:04:33,600 | INFO     | intersect: -19113711185.44916
[2025-07-25 21:05:07] 2025-07-26 01:04:33,600 | INFO     | chi2: 1.963047535878356
[2025-07-25 21:05:07] 2025-07-26 01:04:33,601 | INFO     | current chi2=1.963047535878356 (change=27.9258177702662 %)
[2025-07-25 21:05:07] 2025-07-26 01:04:33,601 | INFO     | sum of square deviations: 887832283.2464782
[2025-07-25 21:05:07] 2025-07-26 01:04:33,601 | INFO     | sum of deviations: 9927857593.394371
[2025-07-25 21:05:07] 2025-07-26 01:04:33,601 | INFO     | mean x: 1753486935.5422535
[2025-07-25 21:05:07] 2025-07-26 01:04:33,601 | INFO     | mean y: 2178868.267605634
[2025-07-25 21:05:07] 2025-07-26 01:04:33,601 | INFO     | -- intersect: -19605543126.572395
[2025-07-25 21:05:07] 2025-07-26 01:04:33,601 | INFO     | intersect: -19605543126.572395
[2025-07-25 21:05:07] 2025-07-26 01:04:33,602 | INFO     | chi2: 1.9640873629649547
[2025-07-25 21:05:07] 2025-07-26 01:04:33,602 | INFO     | current chi2=1.9640873629649547 (change=-0.05297004110160335 %)
[2025-07-25 21:05:07] 2025-07-26 01:04:33,602 | INFO     | right removable region: 141
[2025-07-25 21:05:07] 2025-07-26 01:04:33,602 | INFO     | sum of square deviations: 985004465.0204074
[2025-07-25 21:05:07] 2025-07-26 01:04:33,603 | INFO     | sum of deviations: -22825493865.244896
[2025-07-25 21:05:07] 2025-07-26 01:04:33,603 | INFO     | mean x: 1753487393.0816326
[2025-07-25 21:05:07] 2025-07-26 01:04:33,603 | INFO     | mean y: 2203411.0204081633
[2025-07-25 21:05:07] 2025-07-26 01:04:33,603 | INFO     | -- intersect: 40635740775.48286
[2025-07-25 21:05:07] 2025-07-26 01:04:33,603 | INFO     | intersect: 40635740775.48286
[2025-07-25 21:05:07] 2025-07-26 01:04:33,603 | INFO     | chi2: 0.9845241711765312
[2025-07-25 21:05:07] 2025-07-26 01:04:33,603 | INFO     | current chi2=0.9845241711765312 (change=63.85274771698038 %)
[2025-07-25 21:05:07] 2025-07-26 01:04:33,603 | INFO     | sum of square deviations: 887873402.4859148
[2025-07-25 21:05:07] 2025-07-26 01:04:33,604 | INFO     | sum of deviations: -23589486866.84507
[2025-07-25 21:05:07] 2025-07-26 01:04:33,604 | INFO     | mean x: 1753487545.584507
[2025-07-25 21:05:07] 2025-07-26 01:04:33,604 | INFO     | mean y: 2204562.0704225353
[2025-07-25 21:05:07] 2025-07-26 01:04:33,604 | INFO     | -- intersect: 46589782601.83304
[2025-07-25 21:05:07] 2025-07-26 01:04:33,604 | INFO     | intersect: 46589782601.83304
[2025-07-25 21:05:07] 2025-07-26 01:04:33,604 | INFO     | chi2: 0.9637620912234792
[2025-07-25 21:05:07] 2025-07-26 01:04:33,605 | INFO     | current chi2=0.9637620912234792 (change=2.1088441057004017 %)
[2025-07-25 21:05:07] 2025-07-26 01:04:33,605 | INFO     | left removable region: 20
[2025-07-25 21:05:07] 2025-07-26 01:04:33,605 | INFO     | sum of square deviations: 549313788.7933904
[2025-07-25 21:05:07] 2025-07-26 01:04:33,605 | INFO     | sum of deviations: -10354852018.619835
[2025-07-25 21:05:07] 2025-07-26 01:04:33,605 | INFO     | mean x: 1753487515.0413222
[2025-07-25 21:05:07] 2025-07-26 01:04:33,606 | INFO     | mean y: 2213207.123966942
[2025-07-25 21:05:07] 2025-07-26 01:04:33,606 | INFO     | -- intersect: 33056369329.135353
[2025-07-25 21:05:07] 2025-07-26 01:04:33,606 | INFO     | intersect: 33056369329.135353
[2025-07-25 21:05:07] 2025-07-26 01:04:33,606 | INFO     | chi2: 0.15404961668351758
[2025-07-25 21:05:07] 2025-07-26 01:04:33,606 | INFO     | -- intersect: 33056369329.135353
[2025-07-25 21:05:07] 2025-07-26 01:04:33,606 | INFO     | current memory leak: -18.85 B/s (using 121 data points, chi2=0.15)
[2025-07-25 21:05:07] 2025-07-26 01:04:33,606 | INFO     | could have reported an average CPU frequency of 2988 MHz (9 samples)
[2025-07-25 21:05:07] 2025-07-26 01:04:33,607 | INFO     | ..............................
[2025-07-25 21:05:07] 2025-07-26 01:04:33,607 | INFO     | . Timing measurements:
[2025-07-25 21:05:07] 2025-07-26 01:04:33,607 | INFO     | . get job = 0 s
[2025-07-25 21:05:07] 2025-07-26 01:04:33,607 | INFO     | . initial setup = 4 s
[2025-07-25 21:05:07] 2025-07-26 01:04:33,607 | INFO     | . payload setup = 17 s
[2025-07-25 21:05:07] 2025-07-26 01:04:33,607 | INFO     | . stage-in = 0 s
[2025-07-25 21:05:07] 2025-07-26 01:04:33,607 | INFO     | . payload execution = 9231 s
[2025-07-25 21:05:07] 2025-07-26 01:04:33,607 | INFO     | . stage-out = 0 s
[2025-07-25 21:05:07] 2025-07-26 01:04:33,607 | INFO     | . log creation = 0 s
[2025-07-25 21:05:07] 2025-07-26 01:04:33,607 | INFO     | ..............................
[2025-07-25 21:05:07] 2025-07-26 01:04:33,691 | INFO     | 
[2025-07-25 21:05:07] 2025-07-26 01:04:33,692 | INFO     | job summary report
[2025-07-25 21:05:07] 2025-07-26 01:04:33,692 | INFO     | --------------------------------------------------
[2025-07-25 21:05:07] 2025-07-26 01:04:33,692 | INFO     | PanDA job id: 6745058437
[2025-07-25 21:05:07] 2025-07-26 01:04:33,692 | INFO     | task id: 45743349
[2025-07-25 21:05:07] 2025-07-26 01:04:33,692 | INFO     | errors: (none)
[2025-07-25 21:05:07] 2025-07-26 01:04:33,692 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-25 21:05:07] 2025-07-26 01:04:33,692 | INFO     | pilot state: finished 
[2025-07-25 21:05:07] 2025-07-26 01:04:33,692 | INFO     | transexitcode: 0
[2025-07-25 21:05:07] 2025-07-26 01:04:33,692 | INFO     | exeerrorcode: 0
[2025-07-25 21:05:07] 2025-07-26 01:04:33,692 | INFO     | exeerrordiag: 
[2025-07-25 21:05:07] 2025-07-26 01:04:33,692 | INFO     | exitcode: 0
[2025-07-25 21:05:07] 2025-07-26 01:04:33,693 | INFO     | exitmsg: OK
[2025-07-25 21:05:07] 2025-07-26 01:04:33,693 | INFO     | cpuconsumptiontime: 36498 s
[2025-07-25 21:05:07] 2025-07-26 01:04:33,693 | INFO     | nevents: 400
[2025-07-25 21:05:07] 2025-07-26 01:04:33,693 | INFO     | neventsw: 0
[2025-07-25 21:05:07] 2025-07-26 01:04:33,693 | INFO     | pid: 617661
[2025-07-25 21:05:07] 2025-07-26 01:04:33,693 | INFO     | pgrp: 617661
[2025-07-25 21:05:07] 2025-07-26 01:04:33,693 | INFO     | corecount: 8
[2025-07-25 21:05:07] 2025-07-26 01:04:33,693 | INFO     | event service: False
[2025-07-25 21:05:07] 2025-07-26 01:04:33,693 | INFO     | sizes: {0: 2397473, 1: 2397473, 12: 2397791, 22: 2397791, 9252: 2425997, 9253: 2434995, 9256: 2435179, 9265: 2435437}
[2025-07-25 21:05:07] 2025-07-26 01:04:33,693 | INFO     | --------------------------------------------------
[2025-07-25 21:05:07] 2025-07-26 01:04:33,693 | INFO     | 
[2025-07-25 21:05:07] 2025-07-26 01:04:33,693 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-07-25 21:05:07] 2025-07-26 01:04:33,727 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-25 21:05:07] 2025-07-26 01:04:33,728 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-25 21:05:07] 2025-07-26 01:04:33,729 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-25 21:05:07] 2025-07-26 01:04:33,729 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-25 21:05:07] 2025-07-26 01:04:33,729 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-25 21:05:07] 2025-07-26 01:04:33,729 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-25 21:05:07] 2025-07-26 01:04:33,729 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-25 21:05:07] 2025-07-26 01:04:33,729 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-25 21:05:07] 2025-07-26 01:04:33,729 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-25 21:05:07] 2025-07-26 01:04:33,729 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-25 21:05:07] 2025-07-26 01:04:33,729 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-25 21:05:07] 2025-07-26 01:04:33,729 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-25 21:05:07] 2025-07-26 01:04:33,729 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-25 21:05:07] 2025-07-26 01:04:33,730 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-25 21:05:07] 2025-07-26 01:04:33,730 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-25 21:05:07] 2025-07-26 01:04:33,730 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-25 21:05:07] 2025-07-26 01:04:33,730 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-25 21:05:07] 2025-07-26 01:04:33,730 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-25 21:05:07] 2025-07-26 01:04:33,730 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-25 21:05:07] 2025-07-26 01:04:33,730 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-25 21:05:07] 2025-07-26 01:04:33,730 | INFO     | job 6745058437 has completed (purged errors)
[2025-07-25 21:05:07] 2025-07-26 01:04:33,730 | INFO     | overall cleanup function is called
[2025-07-25 21:05:07] 2025-07-26 01:04:34,258 | INFO     | PID=610296 has CPU usage=12.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-25 21:05:07] 2025-07-26 01:04:34,258 | INFO     | .. there are 42 such processes running
[2025-07-25 21:05:07] 2025-07-26 01:04:34,742 | INFO     | --- collectZombieJob: --- 10, [617661]
[2025-07-25 21:05:07] 2025-07-26 01:04:34,742 | INFO     | zombie collector waiting for pid 617661
[2025-07-25 21:05:07] 2025-07-26 01:04:34,742 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-25 21:05:07] 2025-07-26 01:04:34,742 | INFO     | collected zombie processes
[2025-07-25 21:05:07] 2025-07-26 01:04:34,743 | INFO     | will attempt to kill all subprocesses of pid=617661
[2025-07-25 21:05:07] 2025-07-26 01:04:35,266 | INFO     | process IDs to be killed: [617661] (in reverse order)
[2025-07-25 21:05:07] 2025-07-26 01:04:35,462 | WARNING  | found no corresponding commands to process id(s)
[2025-07-25 21:05:07] 2025-07-26 01:04:35,462 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-25 21:05:07] 2025-07-26 01:04:35,486 | INFO     | did not find any defunct processes belonging to 617661
[2025-07-25 21:05:07] 2025-07-26 01:04:35,509 | INFO     | did not find any defunct processes belonging to 617661
[2025-07-25 21:05:07] 2025-07-26 01:04:35,510 | INFO     | ready for new job
[2025-07-25 21:05:07] 2025-07-26 01:04:35,510 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-25 21:05:07] 2025-07-26 01:04:35,512 | INFO     | ***************************************
[2025-07-25 21:05:07] 2025-07-26 01:04:35,512 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-25 21:05:07] 2025-07-26 01:04:35,513 | INFO     | ***************************************
[2025-07-25 21:05:07] 2025-07-26 01:04:35,513 | INFO     | 
[2025-07-25 21:05:07] 2025-07-26 01:04:35,530 | INFO     | architecture information:
[2025-07-25 21:05:07] 2025-07-26 01:04:35,531 | INFO     | executing command: cat /etc/os-release
[2025-07-25 21:05:07] 2025-07-26 01:04:35,562 | INFO     | cat /etc/os-release:
[2025-07-25 21:05:07] NAME="CentOS Linux"
[2025-07-25 21:05:07] VERSION="7 (Core)"
[2025-07-25 21:05:07] ID="centos"
[2025-07-25 21:05:07] ID_LIKE="rhel fedora"
[2025-07-25 21:05:07] VERSION_ID="7"
[2025-07-25 21:05:07] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-25 21:05:07] ANSI_COLOR="0;31"
[2025-07-25 21:05:07] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-25 21:05:07] HOME_URL="https://www.centos.org/"
[2025-07-25 21:05:07] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-25 21:05:07] 
[2025-07-25 21:05:07] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-25 21:05:07] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-25 21:05:07] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-25 21:05:07] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-25 21:05:07] 
[2025-07-25 21:05:07] 2025-07-26 01:04:35,562 | INFO     | ***************************************
[2025-07-25 21:05:07] 2025-07-26 01:04:36,065 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-07-25 21:05:07] 2025-07-26 01:04:36,105 | INFO     | sufficient remaining disk space (75579260928 B)
[2025-07-25 21:05:07] 2025-07-26 01:04:36,105 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-25 21:05:07] 2025-07-26 01:04:36,105 | INFO     | current server update state: UPDATING_FINAL
[2025-07-25 21:05:07] 2025-07-26 01:04:36,105 | INFO     | update_server=False
[2025-07-25 21:05:07] 2025-07-26 01:04:36,105 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-25 21:05:07] 2025-07-26 01:04:36,106 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-25 21:05:07] 2025-07-26 01:04:36,107 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-25 21:05:07] 2025-07-26 01:04:36,109 | INFO     | aborting loop
[2025-07-25 21:05:07] 2025-07-26 01:04:36,275 | INFO     | all data control threads have been joined
[2025-07-25 21:05:07] 2025-07-26 01:04:37,092 | INFO     | all payload control threads have been joined
[2025-07-25 21:05:07] 2025-07-26 01:04:37,112 | INFO     | [job] retrieve thread has finished
[2025-07-25 21:05:07] 2025-07-26 01:04:37,114 | INFO     | [job] job monitor thread has finished
[2025-07-25 21:05:07] 2025-07-26 01:04:37,280 | INFO     | [data] control thread has finished
[2025-07-25 21:05:07] 2025-07-26 01:04:37,308 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-25 21:05:07] 2025-07-26 01:04:37,346 | INFO     | [data] copytool_in thread has finished
[2025-07-25 21:05:07] 2025-07-26 01:04:37,436 | INFO     | all job control threads have been joined
[2025-07-25 21:05:07] 2025-07-26 01:04:37,491 | INFO     | [job] validate thread has finished
[2025-07-25 21:05:07] 2025-07-26 01:04:37,542 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-25 21:05:07] 2025-07-26 01:04:37,593 | INFO     | [payload] validate_pre thread has finished
[2025-07-25 21:05:07] 2025-07-26 01:04:37,673 | INFO     | [job] create_data_payload thread has finished
[2025-07-25 21:05:07] 2025-07-26 01:04:38,098 | INFO     | [payload] control thread has finished
[2025-07-25 21:05:07] 2025-07-26 01:04:38,180 | INFO     | [payload] validate_post thread has finished
[2025-07-25 21:05:07] 2025-07-26 01:04:38,225 | INFO     | [payload] failed_post thread has finished
[2025-07-25 21:05:07] 2025-07-26 01:04:38,442 | INFO     | [job] control thread has finished
[2025-07-25 21:05:07] 2025-07-26 01:04:38,481 | INFO     | [payload] execute_payloads thread has finished
[2025-07-25 21:05:07] 2025-07-26 01:04:38,702 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-25 21:05:07] 2025-07-26 01:04:39,550 | INFO     | [data] copytool_out thread has finished
[2025-07-25 21:05:07] 2025-07-26 01:04:39,709 | INFO     | [job] queue monitor thread has finished
[2025-07-25 21:05:07] 2025-07-26 01:04:40,115 | INFO     | [data] queue_monitor thread has finished
[2025-07-25 21:05:07] 2025-07-26 01:04:40,370 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140175021492032)>', '<ExcThread(monitor, started 140174679848704)>']
[2025-07-25 21:05:07] 2025-07-26 01:04:45,395 | INFO     | all workflow threads have been joined
[2025-07-25 21:05:07] 2025-07-26 01:04:45,396 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-25 21:05:07] 2025-07-26 01:04:45,396 | INFO     | traces error code: 0
[2025-07-25 21:05:07] 2025-07-26 01:04:45,397 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-25 21:05:07] 2025-07-26 01:05:07,012 | INFO     | PID=610296 has CPU usage=3.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-07-25 21:05:07] 2025-07-26 01:05:07,013 | INFO     | .. there are 42 such processes running
[2025-07-25 21:05:07] 2025-07-26 01:05:07,014 | INFO     | found 0 job(s) in 20 queues
[2025-07-25 21:05:07] 2025-07-26 01:05:07,014 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-25 21:05:07] 2025-07-26 01:05:07,014 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-25 21:05:07] 2025-07-26 01:05:07,014 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-25 21:05:07] 2025-07-26 01:05:07,014 | INFO     | [monitor] control thread has ended
[2025-07-25 21:05:07] 2025-07-26 01:05:07,146 [wrapper] ==== pilot stdout END ====
[2025-07-25 21:05:07] 2025-07-26 01:05:07,151 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-25 21:05:07] 2025-07-26 01:05:07,155 [wrapper] pilotpid: 610296
[2025-07-25 21:05:07] 2025-07-26 01:05:07,158 [wrapper] Pilot exit status: 0
[2025-07-25 21:05:07] 2025-07-26 01:05:07,207 [wrapper] pandaids: 6745058437
[2025-07-25 21:05:07] 2025-07-26 01:05:07,340 [wrapper] cleanup supervisor_pilot 1258053 610297
[2025-07-25 21:05:07] 2025-07-26 01:05:07,365 [wrapper] Test setup, not cleaning
[2025-07-25 21:05:07] 2025-07-26 01:05:07,377 [wrapper] apfmon messages muted
[2025-07-25 21:05:07] 2025-07-26 01:05:07,386 [wrapper] ==== wrapper stdout END ====
[2025-07-25 21:05:07] 2025-07-26 01:05:07,407 [wrapper] ==== wrapper stderr END ====
[2025-07-25 21:05:07]  *** Error codes and diagnostics ***
[2025-07-25 21:05:07]     "exeErrorCode": 0,
[2025-07-25 21:05:07]     "exeErrorDiag": "",
[2025-07-25 21:05:07]     "pilotErrorCode": 0,
[2025-07-25 21:05:07]     "pilotErrorDiag": "",
[2025-07-25 21:05:07]  *** Listing of results directory ***
[2025-07-25 21:05:07] total 348444
[2025-07-25 21:05:07] -rw-r--r--. 1 boincer umatlas    530466 Jul 25 12:23 pilot3.tar.gz
[2025-07-25 21:05:07] -rw-r--r--. 1 boincer umatlas      5112 Jul 25 12:38 queuedata.json
[2025-07-25 21:05:07] -rwx------. 1 boincer umatlas     36292 Jul 25 12:39 runpilot2-wrapper.sh
[2025-07-25 21:05:07] -rw-r--r--. 1 boincer umatlas       100 Jul 25 18:29 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-25 21:05:07] -rwxr-xr-x. 1 boincer umatlas      7986 Jul 25 18:29 run_atlas
[2025-07-25 21:05:07] -rw-r--r--. 1 boincer umatlas       105 Jul 25 18:29 job.xml
[2025-07-25 21:05:07] -rw-r--r--. 2 boincer umatlas 148429063 Jul 25 18:29 EVNT.45743347._001352.pool.root.1
[2025-07-25 21:05:07] drwxrwx--x. 2 boincer umatlas      4096 Jul 25 18:29 shared
[2025-07-25 21:05:07] -rw-r--r--. 2 boincer umatlas    542895 Jul 25 18:29 input.tar.gz
[2025-07-25 21:05:07] -rw-r--r--. 2 boincer umatlas     15095 Jul 25 18:29 start_atlas.sh
[2025-07-25 21:05:07] -rw-r--r--. 1 boincer umatlas         0 Jul 25 18:29 boinc_lockfile
[2025-07-25 21:05:07] -rw-r--r--. 1 boincer umatlas      2562 Jul 25 18:29 pandaJob.out
[2025-07-25 21:05:07] -rw-------. 1 boincer umatlas    980001 Jul 25 18:29 agis_schedconf.cvmfs.json
[2025-07-25 21:05:07] -rw-------. 1 boincer umatlas   1593052 Jul 25 18:29 agis_ddmendpoints.agis.ALL.json
[2025-07-25 21:05:07] drwx------. 4 boincer umatlas      4096 Jul 25 18:29 pilot3
[2025-07-25 21:05:07] -rw-r--r--. 1 boincer umatlas      6933 Jul 25 21:02 init_data.xml
[2025-07-25 21:05:07] -rw-------. 1 boincer umatlas 202266983 Jul 25 21:03 HITS.45743349._023882.pool.root.1
[2025-07-25 21:05:07] -rw-r--r--. 1 boincer umatlas       529 Jul 25 21:03 boinc_task_state.xml
[2025-07-25 21:05:07] -rw-------. 1 boincer umatlas      1032 Jul 25 21:04 memory_monitor_summary.json
[2025-07-25 21:05:07] -rw-------. 1 boincer umatlas    347154 Jul 25 21:04 log.45743349._023882.job.log.tgz.1
[2025-07-25 21:05:07] -rw-------. 1 boincer umatlas      7771 Jul 25 21:04 heartbeat.json
[2025-07-25 21:05:07] -rw-r--r--. 1 boincer umatlas        27 Jul 25 21:05 wrapper_checkpoint.txt
[2025-07-25 21:05:07] -rw-r--r--. 1 boincer umatlas      8192 Jul 25 21:05 boinc_mmap_file
[2025-07-25 21:05:07] -rw-------. 1 boincer umatlas       822 Jul 25 21:05 pilotlog.txt
[2025-07-25 21:05:07] -rw-------. 1 boincer umatlas        95 Jul 25 21:05 pilot_heartbeat.json
[2025-07-25 21:05:07] -rw-------. 1 boincer umatlas    766335 Jul 25 21:05 log.45743349._023882.job.log.1
[2025-07-25 21:05:07] -rw-------. 1 boincer umatlas       357 Jul 25 21:05 output.list
[2025-07-25 21:05:07] -rw-r--r--. 1 boincer umatlas       620 Jul 25 21:05 runtime_log
[2025-07-25 21:05:07] -rw-------. 1 boincer umatlas   1136640 Jul 25 21:05 result.tar.gz
[2025-07-25 21:05:07] -rw-r--r--. 1 boincer umatlas      8655 Jul 25 21:05 runtime_log.err
[2025-07-25 21:05:07] -rw-------. 1 boincer umatlas       652 Jul 25 21:05 irDLDmycaz7n9Rq4apOajLDm4fhM0noT9bVof3QYDmMFzKDmkhaU2m.diag
[2025-07-25 21:05:07] -rw-r--r--. 1 boincer umatlas     21100 Jul 25 21:05 stderr.txt
[2025-07-25 21:05:07] HITS file was successfully produced:
[2025-07-25 21:05:07] -rw-------. 1 boincer umatlas 202266983 Jul 25 21:03 shared/HITS.pool.root.1
[2025-07-25 21:05:07]  *** Contents of shared directory: ***
[2025-07-25 21:05:07] total 344148
[2025-07-25 21:05:07] -rw-r--r--. 2 boincer umatlas 148429063 Jul 25 18:29 ATLAS.root_0
[2025-07-25 21:05:07] -rw-r--r--. 2 boincer umatlas    542895 Jul 25 18:29 input.tar.gz
[2025-07-25 21:05:07] -rw-r--r--. 2 boincer umatlas     15095 Jul 25 18:29 start_atlas.sh
[2025-07-25 21:05:07] -rw-------. 1 boincer umatlas 202266983 Jul 25 21:03 HITS.pool.root.1
[2025-07-25 21:05:07] -rw-------. 1 boincer umatlas   1136640 Jul 25 21:05 result.tar.gz
21:05:09 (606031): run_atlas exited; CPU time 36870.926598
21:05:09 (606031): called boinc_finish(0)

</stderr_txt>
]]>

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